HEADER TRANSFERASE 16-APR-20 6YPP TITLE CRYSTAL STRUCTURE OF THE CAMP-DEPENDENT PROTEIN KINASE A TITLE 2 COCRYSTALLIZED WITH PKI (5-24). SOAKING OF AMINOFASUDIL AND TITLE 3 DISPLACING IT WITH THE FRAGMENT ISOQUINOLINE. COMPND MOL_ID: 1; COMPND 2 MOLECULE: CAMP-DEPENDENT PROTEIN KINASE CATALYTIC SUBUNIT ALPHA; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PKA C-ALPHA; COMPND 5 EC: 2.7.11.11; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: CAMP-DEPENDENT PROTEIN KINASE INHIBITOR ALPHA; COMPND 9 CHAIN: B; COMPND 10 SYNONYM: PKI-ALPHA,CAMP-DEPENDENT PROTEIN KINASE INHIBITOR, COMPND 11 MUSCLE/BRAIN ISOFORM; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CRICETULUS GRISEUS; SOURCE 3 ORGANISM_COMMON: CHINESE HAMSTER; SOURCE 4 ORGANISM_TAXID: 10029; SOURCE 5 GENE: PRKACA; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 11 ORGANISM_COMMON: MOUSE; SOURCE 12 ORGANISM_TAXID: 10090 KEYWDS PHOSPHOTRANSFERASE, SIGNALLING PATHWAYS, GLYCOGEN METABOLISM, KEYWDS 2 SERINE/THREONINE KINASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR M.OEBBEKE,H.-D.GERBER,A.HEINE,G.KLEBE REVDAT 2 24-JAN-24 6YPP 1 REMARK REVDAT 1 28-APR-21 6YPP 0 JRNL AUTH M.OEBBEKE,E.HASSAAN,A.HEINE,G.KLEBE JRNL TITL FLUORESCENCE-BASED DISPLACEMENT EXPERIMENTS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17.1_3660 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.89 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 3 NUMBER OF REFLECTIONS : 37708 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.179 REMARK 3 R VALUE (WORKING SET) : 0.177 REMARK 3 FREE R VALUE : 0.203 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1886 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.8900 - 4.1100 0.98 2908 154 0.1964 0.2262 REMARK 3 2 4.1100 - 3.2600 0.99 2798 147 0.1704 0.1742 REMARK 3 3 3.2600 - 2.8500 0.99 2798 147 0.1724 0.1885 REMARK 3 4 2.8500 - 2.5900 0.99 2757 145 0.1668 0.1844 REMARK 3 5 2.5900 - 2.4000 1.00 2766 146 0.1598 0.1916 REMARK 3 6 2.4000 - 2.2600 0.99 2766 145 0.1540 0.1882 REMARK 3 7 2.2600 - 2.1500 0.99 2734 144 0.1625 0.1929 REMARK 3 8 2.1500 - 2.0500 1.00 2737 144 0.1647 0.2119 REMARK 3 9 2.0500 - 1.9700 1.00 2758 145 0.1727 0.2182 REMARK 3 10 1.9700 - 1.9100 1.00 2740 145 0.1851 0.2195 REMARK 3 11 1.9100 - 1.8500 0.99 2723 143 0.1994 0.2325 REMARK 3 12 1.8500 - 1.7900 0.99 2720 143 0.2139 0.2537 REMARK 3 13 1.7900 - 1.7500 0.96 2617 138 0.2272 0.2851 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.174 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.325 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 21.94 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.62 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 2911 REMARK 3 ANGLE : 0.910 3952 REMARK 3 CHIRALITY : 0.054 423 REMARK 3 PLANARITY : 0.006 522 REMARK 3 DIHEDRAL : 22.680 1045 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 13 THROUGH 54 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.9867 16.2793 19.7789 REMARK 3 T TENSOR REMARK 3 T11: 0.1728 T22: 0.2303 REMARK 3 T33: 0.2419 T12: -0.0270 REMARK 3 T13: 0.0235 T23: 0.0151 REMARK 3 L TENSOR REMARK 3 L11: 0.3799 L22: 2.7679 REMARK 3 L33: 1.9739 L12: -0.4673 REMARK 3 L13: -0.4694 L23: 1.7630 REMARK 3 S TENSOR REMARK 3 S11: 0.1170 S12: -0.0294 S13: 0.0169 REMARK 3 S21: -0.1043 S22: -0.0870 S23: -0.1403 REMARK 3 S31: -0.1682 S32: 0.0977 S33: 0.0064 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 55 THROUGH 198 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.0475 9.7966 22.6281 REMARK 3 T TENSOR REMARK 3 T11: 0.1674 T22: 0.1497 REMARK 3 T33: 0.1912 T12: 0.0152 REMARK 3 T13: 0.0034 T23: 0.0003 REMARK 3 L TENSOR REMARK 3 L11: 0.9274 L22: 0.5501 REMARK 3 L33: 1.2141 L12: -0.1295 REMARK 3 L13: -0.5677 L23: 0.3738 REMARK 3 S TENSOR REMARK 3 S11: 0.0014 S12: 0.0125 S13: 0.0049 REMARK 3 S21: -0.1105 S22: -0.0551 S23: -0.0567 REMARK 3 S31: 0.0006 S32: 0.0825 S33: 0.0577 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 199 THROUGH 297 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.7575 10.7990 37.2927 REMARK 3 T TENSOR REMARK 3 T11: 0.1197 T22: 0.1553 REMARK 3 T33: 0.1576 T12: 0.0095 REMARK 3 T13: 0.0329 T23: -0.0061 REMARK 3 L TENSOR REMARK 3 L11: 1.7002 L22: 2.1645 REMARK 3 L33: 2.2497 L12: -0.5270 REMARK 3 L13: -0.0198 L23: -0.7081 REMARK 3 S TENSOR REMARK 3 S11: -0.0068 S12: -0.1325 S13: 0.0291 REMARK 3 S21: 0.1059 S22: 0.0577 S23: 0.1454 REMARK 3 S31: -0.0369 S32: -0.1133 S33: -0.0536 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 298 THROUGH 350 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.3416 4.8115 20.4948 REMARK 3 T TENSOR REMARK 3 T11: 0.1758 T22: 0.1722 REMARK 3 T33: 0.2347 T12: -0.0226 REMARK 3 T13: 0.0110 T23: 0.0204 REMARK 3 L TENSOR REMARK 3 L11: 0.5923 L22: 0.6436 REMARK 3 L33: 1.1450 L12: -0.3171 REMARK 3 L13: -0.7310 L23: 0.4527 REMARK 3 S TENSOR REMARK 3 S11: -0.0619 S12: -0.0131 S13: -0.0478 REMARK 3 S21: -0.1143 S22: -0.0384 S23: 0.0229 REMARK 3 S31: 0.0123 S32: 0.1174 S33: 0.1129 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 6 THROUGH 13 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.4822 -6.5746 33.2156 REMARK 3 T TENSOR REMARK 3 T11: 0.3986 T22: 0.3893 REMARK 3 T33: 0.4882 T12: -0.1735 REMARK 3 T13: -0.0012 T23: -0.0075 REMARK 3 L TENSOR REMARK 3 L11: 4.8667 L22: 6.2058 REMARK 3 L33: 7.4813 L12: 1.3597 REMARK 3 L13: 0.3763 L23: -1.6562 REMARK 3 S TENSOR REMARK 3 S11: 0.3062 S12: -0.8013 S13: -0.3652 REMARK 3 S21: 0.5737 S22: -0.4562 S23: 0.1062 REMARK 3 S31: 0.4784 S32: -0.6683 S33: 0.1198 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 14 THROUGH 21 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.5650 -0.4655 23.5866 REMARK 3 T TENSOR REMARK 3 T11: 0.4142 T22: 0.2915 REMARK 3 T33: 0.2639 T12: -0.0707 REMARK 3 T13: 0.0242 T23: -0.0093 REMARK 3 L TENSOR REMARK 3 L11: 6.8618 L22: 3.9002 REMARK 3 L33: 0.9282 L12: -1.9435 REMARK 3 L13: 0.6214 L23: 1.5091 REMARK 3 S TENSOR REMARK 3 S11: 0.0670 S12: 0.5085 S13: -0.5109 REMARK 3 S21: -0.7543 S22: -0.0813 S23: -0.0019 REMARK 3 S31: -0.0441 S32: -0.0195 S33: 0.0708 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6YPP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 16-APR-20. REMARK 100 THE DEPOSITION ID IS D_1292108057. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-JUN-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.9 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.91840 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 37708 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.747 REMARK 200 RESOLUTION RANGE LOW (A) : 48.890 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 200 DATA REDUNDANCY : 4.200 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.04700 REMARK 200 FOR THE DATA SET : 20.6700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.85 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.51500 REMARK 200 FOR SHELL : 2.560 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6F14 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.14 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.24 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0,2 MM PKA IN 100 MM MES-BIS-TRIS REMARK 280 -BUFFER, 1 MM DITHIOTHREITOL, 0.1 MM SODIUM EDTA, 75 MM LICL, REMARK 280 0.2 MM MEGA 8 AND 23 % METHANOL (V/V) 0.003 ML DROP VOLUME, 0.5 REMARK 280 ML RESERVOIR VOLUME SOAKING OF AMINOFASUDIL: IN BUFFER WITH 10% REMARK 280 OF LIGAND IN DMSO (50 MM STOCK) AND 30% MPD DISPLACEMENT WITH REMARK 280 ISOQUINOLINE: IN BUFFER WITH 10% OF LIGAND IN DMSO AND 30% MPD, REMARK 280 PH 6.9, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 26.24950 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 48.88950 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 35.82900 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 48.88950 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 26.24950 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 35.82900 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1910 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15270 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 6.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -2 REMARK 465 HIS A -1 REMARK 465 MET A 0 REMARK 465 GLY A 1 REMARK 465 ASN A 2 REMARK 465 ALA A 3 REMARK 465 ALA A 4 REMARK 465 ALA A 5 REMARK 465 ALA A 6 REMARK 465 LYS A 7 REMARK 465 LYS A 8 REMARK 465 GLY A 9 REMARK 465 SEP A 10 REMARK 465 GLU A 11 REMARK 465 GLY A 52 REMARK 465 SER A 53 REMARK 465 THR B 5 REMARK 465 ILE B 22 REMARK 465 HIS B 23 REMARK 465 ASP B 24 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 12 CG CD OE1 NE2 REMARK 470 SER A 14 OG REMARK 470 LYS A 16 CG CD CE NZ REMARK 470 LYS A 29 CE NZ REMARK 470 GLU A 31 CG CD OE1 OE2 REMARK 470 PHE A 54 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLU A 64 CG CD OE1 OE2 REMARK 470 LYS A 78 CG CD CE NZ REMARK 470 LYS A 81 CG CD CE NZ REMARK 470 LEU A 82 CG CD1 CD2 REMARK 470 LYS A 83 CG CD CE NZ REMARK 470 LYS A 105 CG CD CE NZ REMARK 470 GLN A 176 CG CD OE1 NE2 REMARK 470 GLN A 177 NE2 REMARK 470 LYS A 213 CD CE NZ REMARK 470 LYS A 217 CG CD CE NZ REMARK 470 ILE A 244 CG1 CG2 CD1 REMARK 470 LYS A 254 CG CD CE NZ REMARK 470 ARG A 256 NE CZ NH1 NH2 REMARK 470 LYS A 266 NZ REMARK 470 LYS A 285 CD CE NZ REMARK 470 LYS A 295 CG CD CE NZ REMARK 470 LYS A 309 CE NZ REMARK 470 GLU A 311 CG CD OE1 OE2 REMARK 470 LYS A 317 CG CD CE NZ REMARK 470 LYS A 319 CE NZ REMARK 470 GLU A 331 CG CD OE1 OE2 REMARK 470 ARG A 336 CG CD NE CZ NH1 NH2 REMARK 470 ILE A 339 CD1 REMARK 470 LYS A 342 NZ REMARK 470 LYS A 345 CD CE NZ REMARK 470 THR B 6 OG1 CG2 REMARK 470 ILE B 11 CD1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 99 107.71 -160.28 REMARK 500 ASP A 166 37.96 -145.42 REMARK 500 ASP A 184 91.25 69.21 REMARK 500 LEU A 273 42.13 -92.34 REMARK 500 ARG B 15 47.53 -87.51 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ISQ A 401 DBREF 6YPP A 0 350 UNP P25321 KAPCA_CRIGR 1 351 DBREF 6YPP B 5 24 UNP P63248 IPKA_MOUSE 6 25 SEQADV 6YPP GLY A -2 UNP P25321 EXPRESSION TAG SEQADV 6YPP HIS A -1 UNP P25321 EXPRESSION TAG SEQRES 1 A 353 GLY HIS MET GLY ASN ALA ALA ALA ALA LYS LYS GLY SEP SEQRES 2 A 353 GLU GLN GLU SER VAL LYS GLU PHE LEU ALA LYS ALA LYS SEQRES 3 A 353 GLU GLU PHE LEU LYS LYS TRP GLU SER PRO SER GLN ASN SEQRES 4 A 353 THR ALA GLN LEU ASP HIS PHE ASP ARG ILE LYS THR LEU SEQRES 5 A 353 GLY THR GLY SER PHE GLY ARG VAL MET LEU VAL LYS HIS SEQRES 6 A 353 LYS GLU THR GLY ASN HIS TYR ALA MET LYS ILE LEU ASP SEQRES 7 A 353 LYS GLN LYS VAL VAL LYS LEU LYS GLN ILE GLU HIS THR SEQRES 8 A 353 LEU ASN GLU LYS ARG ILE LEU GLN ALA VAL ASN PHE PRO SEQRES 9 A 353 PHE LEU VAL LYS LEU GLU PHE SER PHE LYS ASP ASN SER SEQRES 10 A 353 ASN LEU TYR MET VAL MET GLU TYR VAL PRO GLY GLY GLU SEQRES 11 A 353 MET PHE SER HIS LEU ARG ARG ILE GLY ARG PHE SER GLU SEQRES 12 A 353 PRO HIS ALA ARG PHE TYR ALA ALA GLN ILE VAL LEU THR SEQRES 13 A 353 PHE GLU TYR LEU HIS SER LEU ASP LEU ILE TYR ARG ASP SEQRES 14 A 353 LEU LYS PRO GLU ASN LEU LEU ILE ASP GLN GLN GLY TYR SEQRES 15 A 353 ILE GLN VAL THR ASP PHE GLY PHE ALA LYS ARG VAL LYS SEQRES 16 A 353 GLY ARG THR TRP TPO LEU CYS GLY THR PRO GLU TYR LEU SEQRES 17 A 353 ALA PRO GLU ILE ILE LEU SER LYS GLY TYR ASN LYS ALA SEQRES 18 A 353 VAL ASP TRP TRP ALA LEU GLY VAL LEU ILE TYR GLU MET SEQRES 19 A 353 ALA ALA GLY TYR PRO PRO PHE PHE ALA ASP GLN PRO ILE SEQRES 20 A 353 GLN ILE TYR GLU LYS ILE VAL SER GLY LYS VAL ARG PHE SEQRES 21 A 353 PRO SER HIS PHE SER SER ASP LEU LYS ASP LEU LEU ARG SEQRES 22 A 353 ASN LEU LEU GLN VAL ASP LEU THR LYS ARG PHE GLY ASN SEQRES 23 A 353 LEU LYS ASN GLY VAL ASN ASP ILE LYS ASN HIS LYS TRP SEQRES 24 A 353 PHE ALA THR THR ASP TRP ILE ALA ILE TYR GLN ARG LYS SEQRES 25 A 353 VAL GLU ALA PRO PHE ILE PRO LYS PHE LYS GLY PRO GLY SEQRES 26 A 353 ASP THR SER ASN PHE ASP ASP TYR GLU GLU GLU GLU ILE SEQRES 27 A 353 ARG VAL SEP ILE ASN GLU LYS CYS GLY LYS GLU PHE THR SEQRES 28 A 353 GLU PHE SEQRES 1 B 20 THR THR TYR ALA ASP PHE ILE ALA SER GLY ARG THR GLY SEQRES 2 B 20 ARG ARG ASN ALA ILE HIS ASP MODRES 6YPP TPO A 197 THR MODIFIED RESIDUE MODRES 6YPP SEP A 338 SER MODIFIED RESIDUE HET TPO A 197 16 HET SEP A 338 10 HET ISQ A 401 10 HETNAM TPO PHOSPHOTHREONINE HETNAM SEP PHOSPHOSERINE HETNAM ISQ ISOQUINOLINE HETSYN TPO PHOSPHONOTHREONINE HETSYN SEP PHOSPHONOSERINE FORMUL 1 TPO C4 H10 N O6 P FORMUL 1 SEP C3 H8 N O6 P FORMUL 3 ISQ C9 H7 N FORMUL 4 HOH *187(H2 O) HELIX 1 AA1 GLN A 12 SER A 32 1 21 HELIX 2 AA2 GLN A 39 ASP A 41 5 3 HELIX 3 AA3 LYS A 76 LEU A 82 1 7 HELIX 4 AA4 GLN A 84 GLN A 96 1 13 HELIX 5 AA5 GLU A 127 GLY A 136 1 10 HELIX 6 AA6 SER A 139 LEU A 160 1 22 HELIX 7 AA7 LYS A 168 GLU A 170 5 3 HELIX 8 AA8 THR A 201 LEU A 205 5 5 HELIX 9 AA9 ALA A 206 LEU A 211 1 6 HELIX 10 AB1 LYS A 217 GLY A 234 1 18 HELIX 11 AB2 GLN A 242 GLY A 253 1 12 HELIX 12 AB3 SER A 262 LEU A 273 1 12 HELIX 13 AB4 ASP A 276 ARG A 280 5 5 HELIX 14 AB5 VAL A 288 ASN A 293 1 6 HELIX 15 AB6 HIS A 294 ALA A 298 5 5 HELIX 16 AB7 ASP A 301 GLN A 307 1 7 HELIX 17 AB8 TYR B 7 GLY B 14 1 8 SHEET 1 AA1 5 PHE A 43 GLY A 50 0 SHEET 2 AA1 5 GLY A 55 HIS A 62 -1 O LEU A 59 N LYS A 47 SHEET 3 AA1 5 HIS A 68 ASP A 75 -1 O MET A 71 N MET A 58 SHEET 4 AA1 5 ASN A 115 GLU A 121 -1 O MET A 120 N ALA A 70 SHEET 5 AA1 5 LEU A 106 LYS A 111 -1 N GLU A 107 O VAL A 119 SHEET 1 AA2 2 LEU A 162 ILE A 163 0 SHEET 2 AA2 2 LYS A 189 ARG A 190 -1 O LYS A 189 N ILE A 163 SHEET 1 AA3 2 LEU A 172 ILE A 174 0 SHEET 2 AA3 2 ILE A 180 VAL A 182 -1 O GLN A 181 N LEU A 173 LINK C TRP A 196 N TPO A 197 1555 1555 1.33 LINK C TPO A 197 N LEU A 198 1555 1555 1.33 LINK C VAL A 337 N SEP A 338 1555 1555 1.33 LINK C SEP A 338 N ILE A 339 1555 1555 1.33 SITE 1 AC1 6 ALA A 70 GLU A 121 TYR A 122 VAL A 123 SITE 2 AC1 6 LEU A 173 PHE A 327 CRYST1 52.499 71.658 97.779 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019048 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013955 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010227 0.00000