HEADER HYDROLASE 16-APR-20 6YQ7 TITLE TAKA-AMYLASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: ALPHA-AMYLASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 3.2.1.1; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ASPERGILLUS ORYZAE; SOURCE 3 ORGANISM_COMMON: YELLOW KOJI MOLD; SOURCE 4 ORGANISM_TAXID: 5062; SOURCE 5 GENE: OAORY_01097160; SOURCE 6 EXPRESSION_SYSTEM: ASPERGILLUS ORYZAE; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 5062 KEYWDS INHIBITOR, COMPLEX, AMYLASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR Z.ARMSTRONG,Y.CHEN,M.ARTOLA,H.OVERKLEEFT,G.DAVIES REVDAT 6 24-JAN-24 6YQ7 1 REMARK REVDAT 5 24-FEB-21 6YQ7 1 JRNL REVDAT 4 17-FEB-21 6YQ7 1 JRNL REVDAT 3 10-FEB-21 6YQ7 1 JRNL HETSYN REVDAT 2 29-JUL-20 6YQ7 1 COMPND REMARK HETNAM LINK REVDAT 2 2 1 SITE REVDAT 1 10-JUN-20 6YQ7 0 JRNL AUTH Y.CHEN,Z.ARMSTRONG,M.ARTOLA,B.I.FLOREA,C.L.KUO,C.DE BOER, JRNL AUTH 2 M.S.RASMUSSEN,M.ABOU HACHEM,G.A.VAN DER MAREL,J.D.C.CODEE, JRNL AUTH 3 J.M.F.G.AERTS,G.J.DAVIES,H.S.OVERKLEEFT JRNL TITL ACTIVITY-BASED PROTEIN PROFILING OF RETAINING ALPHA-AMYLASES JRNL TITL 2 IN COMPLEX BIOLOGICAL SAMPLES. JRNL REF J.AM.CHEM.SOC. V. 143 2423 2021 JRNL REFN ESSN 1520-5126 JRNL PMID 33497208 JRNL DOI 10.1021/JACS.0C13059 REMARK 2 REMARK 2 RESOLUTION. 1.58 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0238 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.58 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 59.65 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 3 NUMBER OF REFLECTIONS : 123490 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.166 REMARK 3 R VALUE (WORKING SET) : 0.165 REMARK 3 FREE R VALUE : 0.192 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 6357 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.58 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.62 REMARK 3 REFLECTION IN BIN (WORKING SET) : 8974 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.79 REMARK 3 BIN R VALUE (WORKING SET) : 0.2590 REMARK 3 BIN FREE R VALUE SET COUNT : 428 REMARK 3 BIN FREE R VALUE : 0.2620 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7372 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 42 REMARK 3 SOLVENT ATOMS : 518 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.89 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.26000 REMARK 3 B22 (A**2) : 2.01000 REMARK 3 B33 (A**2) : -1.79000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.57000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.079 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.079 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): NULL REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.969 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.961 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 7687 ; 0.011 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 6635 ; 0.037 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 10513 ; 1.698 ; 1.648 REMARK 3 BOND ANGLES OTHERS (DEGREES): 15467 ; 2.421 ; 1.579 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 968 ; 6.819 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 373 ;35.321 ;24.263 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1146 ;13.660 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 21 ; 9.327 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1021 ; 0.090 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 8796 ; 0.011 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1595 ; 0.016 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3851 ; 1.609 ; 2.021 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 3850 ; 1.607 ; 2.020 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4826 ; 2.155 ; 3.032 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 6YQ7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 16-APR-20. REMARK 100 THE DEPOSITION ID IS D_1292108089. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-NOV-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.976260 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 129880 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.580 REMARK 200 RESOLUTION RANGE LOW (A) : 59.650 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 200 DATA REDUNDANCY : 4.200 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.58 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.61 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 7TAA REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.14 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.24 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M SODIUM CITRATE PH 5.6, 18% (V/V) REMARK 280 2-PROPANOL, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 51.55650 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -20 REMARK 465 MET A -19 REMARK 465 VAL A -18 REMARK 465 ALA A -17 REMARK 465 TRP A -16 REMARK 465 TRP A -15 REMARK 465 SER A -14 REMARK 465 LEU A -13 REMARK 465 PHE A -12 REMARK 465 LEU A -11 REMARK 465 TYR A -10 REMARK 465 GLY A -9 REMARK 465 LEU A -8 REMARK 465 GLN A -7 REMARK 465 VAL A -6 REMARK 465 ALA A -5 REMARK 465 ALA A -4 REMARK 465 PRO A -3 REMARK 465 ALA A -2 REMARK 465 LEU A -1 REMARK 465 ALA A 0 REMARK 465 SER A 477 REMARK 465 SER A 478 REMARK 465 MET B -20 REMARK 465 MET B -19 REMARK 465 VAL B -18 REMARK 465 ALA B -17 REMARK 465 TRP B -16 REMARK 465 TRP B -15 REMARK 465 SER B -14 REMARK 465 LEU B -13 REMARK 465 PHE B -12 REMARK 465 LEU B -11 REMARK 465 TYR B -10 REMARK 465 GLY B -9 REMARK 465 LEU B -8 REMARK 465 GLN B -7 REMARK 465 VAL B -6 REMARK 465 ALA B -5 REMARK 465 ALA B -4 REMARK 465 PRO B -3 REMARK 465 ALA B -2 REMARK 465 LEU B -1 REMARK 465 ALA B 0 REMARK 465 SER B 477 REMARK 465 SER B 478 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 78 49.42 -81.84 REMARK 500 SER A 141 38.42 -89.28 REMARK 500 ALA A 329 124.32 -37.28 REMARK 500 ALA A 456 144.80 -172.86 REMARK 500 ALA B 78 47.27 -82.33 REMARK 500 GLN B 85 -32.92 -131.55 REMARK 500 SER B 141 36.04 -87.74 REMARK 500 ALA B 329 121.70 -31.88 REMARK 500 ASP B 340 124.24 -34.82 REMARK 500 ASN B 384 128.27 -38.97 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 504 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 121 OD1 REMARK 620 2 GLU A 162 O 154.1 REMARK 620 3 ASP A 175 OD1 76.0 118.0 REMARK 620 4 ASP A 175 OD2 123.4 79.1 51.4 REMARK 620 5 HIS A 210 O 75.4 80.7 138.9 159.4 REMARK 620 6 HOH A 714 O 70.5 131.9 76.5 77.6 119.8 REMARK 620 7 HOH A 716 O 113.4 72.1 137.8 96.4 81.3 69.5 REMARK 620 8 HOH A 771 O 90.7 75.7 69.8 89.4 81.6 144.6 145.5 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 503 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN B 121 OD1 REMARK 620 2 GLU B 162 O 154.7 REMARK 620 3 ASP B 175 OD1 75.1 120.5 REMARK 620 4 ASP B 175 OD2 122.6 80.6 52.1 REMARK 620 5 HIS B 210 O 76.2 79.6 137.7 159.4 REMARK 620 6 HOH B 679 O 70.4 129.9 77.2 77.0 120.5 REMARK 620 7 HOH B 712 O 111.3 71.1 139.4 98.2 80.3 68.6 REMARK 620 8 HOH B 760 O 93.6 75.2 71.2 89.5 80.4 147.4 143.5 REMARK 620 N 1 2 3 4 5 6 7 DBREF1 6YQ7 A -20 478 UNP A0A1S9DH83_ASPOZ DBREF2 6YQ7 A A0A1S9DH83 1 499 DBREF1 6YQ7 B -20 478 UNP A0A1S9DH83_ASPOZ DBREF2 6YQ7 B A0A1S9DH83 1 499 SEQRES 1 A 499 MET MET VAL ALA TRP TRP SER LEU PHE LEU TYR GLY LEU SEQRES 2 A 499 GLN VAL ALA ALA PRO ALA LEU ALA ALA THR PRO ALA ASP SEQRES 3 A 499 TRP ARG SER GLN SER ILE TYR PHE LEU LEU THR ASP ARG SEQRES 4 A 499 PHE ALA ARG THR ASP GLY SER THR THR ALA THR CYS ASN SEQRES 5 A 499 THR ALA ASP GLN LYS TYR CYS GLY GLY THR TRP GLN GLY SEQRES 6 A 499 ILE ILE ASP LYS LEU ASP TYR ILE GLN GLY MET GLY PHE SEQRES 7 A 499 THR ALA ILE TRP ILE THR PRO VAL THR ALA GLN LEU PRO SEQRES 8 A 499 GLN THR THR ALA TYR GLY ASP ALA TYR HIS GLY TYR TRP SEQRES 9 A 499 GLN GLN ASP ILE TYR SER LEU ASN GLU ASN TYR GLY THR SEQRES 10 A 499 ALA ASP ASP LEU LYS ALA LEU SER SER ALA LEU HIS GLU SEQRES 11 A 499 ARG GLY MET TYR LEU MET VAL ASP VAL VAL ALA ASN HIS SEQRES 12 A 499 MET GLY TYR ASP GLY ALA GLY SER SER VAL ASP TYR SER SEQRES 13 A 499 VAL PHE LYS PRO PHE SER SER GLN ASP TYR PHE HIS PRO SEQRES 14 A 499 PHE CYS PHE ILE GLN ASN TYR GLU ASP GLN THR GLN VAL SEQRES 15 A 499 GLU ASP CYS TRP LEU GLY ASP ASN THR VAL SER LEU PRO SEQRES 16 A 499 ASP LEU ASP THR THR LYS ASP VAL VAL LYS ASN GLU TRP SEQRES 17 A 499 TYR ASP TRP VAL GLY SER LEU VAL SER ASN TYR SER ILE SEQRES 18 A 499 ASP GLY LEU ARG ILE ASP THR VAL LYS HIS VAL GLN LYS SEQRES 19 A 499 ASP PHE TRP PRO GLY TYR ASN LYS ALA ALA GLY VAL TYR SEQRES 20 A 499 CYS ILE GLY GLU VAL LEU ASP GLY ASP PRO ALA TYR THR SEQRES 21 A 499 CYS PRO TYR GLN ASN VAL MET ASP GLY VAL LEU ASN TYR SEQRES 22 A 499 PRO ILE TYR TYR PRO LEU LEU ASN ALA PHE LYS SER THR SEQRES 23 A 499 SER GLY SER MET ASP ASP LEU TYR ASN MET ILE ASN THR SEQRES 24 A 499 VAL LYS SER ASP CYS PRO ASP SER THR LEU LEU GLY THR SEQRES 25 A 499 PHE VAL GLU ASN HIS ASP ASN PRO ARG PHE ALA SER TYR SEQRES 26 A 499 THR ASN ASP ILE ALA LEU ALA LYS ASN VAL ALA ALA PHE SEQRES 27 A 499 ILE ILE LEU ASN ASP GLY ILE PRO ILE ILE TYR ALA GLY SEQRES 28 A 499 GLN GLU GLN HIS TYR ALA GLY GLY ASN ASP PRO ALA ASN SEQRES 29 A 499 ARG GLU ALA THR TRP LEU SER GLY TYR PRO THR ASP SER SEQRES 30 A 499 GLU LEU TYR LYS LEU ILE ALA SER ALA ASN ALA ILE ARG SEQRES 31 A 499 ASN TYR ALA ILE SER LYS ASP THR GLY PHE VAL THR TYR SEQRES 32 A 499 LYS ASN TRP PRO ILE TYR LYS ASP ASP THR THR ILE ALA SEQRES 33 A 499 MET ARG LYS GLY THR ASP GLY SER GLN ILE VAL THR ILE SEQRES 34 A 499 LEU SER ASN LYS GLY ALA SER GLY ASP SER TYR THR LEU SEQRES 35 A 499 SER LEU SER GLY ALA GLY TYR THR ALA GLY GLN GLN LEU SEQRES 36 A 499 THR GLU VAL ILE GLY CYS THR THR VAL THR VAL GLY SER SEQRES 37 A 499 ASP GLY ASN VAL PRO VAL PRO MET ALA GLY GLY LEU PRO SEQRES 38 A 499 ARG VAL LEU TYR PRO THR GLU LYS LEU ALA GLY SER LYS SEQRES 39 A 499 ILE CYS SER SER SER SEQRES 1 B 499 MET MET VAL ALA TRP TRP SER LEU PHE LEU TYR GLY LEU SEQRES 2 B 499 GLN VAL ALA ALA PRO ALA LEU ALA ALA THR PRO ALA ASP SEQRES 3 B 499 TRP ARG SER GLN SER ILE TYR PHE LEU LEU THR ASP ARG SEQRES 4 B 499 PHE ALA ARG THR ASP GLY SER THR THR ALA THR CYS ASN SEQRES 5 B 499 THR ALA ASP GLN LYS TYR CYS GLY GLY THR TRP GLN GLY SEQRES 6 B 499 ILE ILE ASP LYS LEU ASP TYR ILE GLN GLY MET GLY PHE SEQRES 7 B 499 THR ALA ILE TRP ILE THR PRO VAL THR ALA GLN LEU PRO SEQRES 8 B 499 GLN THR THR ALA TYR GLY ASP ALA TYR HIS GLY TYR TRP SEQRES 9 B 499 GLN GLN ASP ILE TYR SER LEU ASN GLU ASN TYR GLY THR SEQRES 10 B 499 ALA ASP ASP LEU LYS ALA LEU SER SER ALA LEU HIS GLU SEQRES 11 B 499 ARG GLY MET TYR LEU MET VAL ASP VAL VAL ALA ASN HIS SEQRES 12 B 499 MET GLY TYR ASP GLY ALA GLY SER SER VAL ASP TYR SER SEQRES 13 B 499 VAL PHE LYS PRO PHE SER SER GLN ASP TYR PHE HIS PRO SEQRES 14 B 499 PHE CYS PHE ILE GLN ASN TYR GLU ASP GLN THR GLN VAL SEQRES 15 B 499 GLU ASP CYS TRP LEU GLY ASP ASN THR VAL SER LEU PRO SEQRES 16 B 499 ASP LEU ASP THR THR LYS ASP VAL VAL LYS ASN GLU TRP SEQRES 17 B 499 TYR ASP TRP VAL GLY SER LEU VAL SER ASN TYR SER ILE SEQRES 18 B 499 ASP GLY LEU ARG ILE ASP THR VAL LYS HIS VAL GLN LYS SEQRES 19 B 499 ASP PHE TRP PRO GLY TYR ASN LYS ALA ALA GLY VAL TYR SEQRES 20 B 499 CYS ILE GLY GLU VAL LEU ASP GLY ASP PRO ALA TYR THR SEQRES 21 B 499 CYS PRO TYR GLN ASN VAL MET ASP GLY VAL LEU ASN TYR SEQRES 22 B 499 PRO ILE TYR TYR PRO LEU LEU ASN ALA PHE LYS SER THR SEQRES 23 B 499 SER GLY SER MET ASP ASP LEU TYR ASN MET ILE ASN THR SEQRES 24 B 499 VAL LYS SER ASP CYS PRO ASP SER THR LEU LEU GLY THR SEQRES 25 B 499 PHE VAL GLU ASN HIS ASP ASN PRO ARG PHE ALA SER TYR SEQRES 26 B 499 THR ASN ASP ILE ALA LEU ALA LYS ASN VAL ALA ALA PHE SEQRES 27 B 499 ILE ILE LEU ASN ASP GLY ILE PRO ILE ILE TYR ALA GLY SEQRES 28 B 499 GLN GLU GLN HIS TYR ALA GLY GLY ASN ASP PRO ALA ASN SEQRES 29 B 499 ARG GLU ALA THR TRP LEU SER GLY TYR PRO THR ASP SER SEQRES 30 B 499 GLU LEU TYR LYS LEU ILE ALA SER ALA ASN ALA ILE ARG SEQRES 31 B 499 ASN TYR ALA ILE SER LYS ASP THR GLY PHE VAL THR TYR SEQRES 32 B 499 LYS ASN TRP PRO ILE TYR LYS ASP ASP THR THR ILE ALA SEQRES 33 B 499 MET ARG LYS GLY THR ASP GLY SER GLN ILE VAL THR ILE SEQRES 34 B 499 LEU SER ASN LYS GLY ALA SER GLY ASP SER TYR THR LEU SEQRES 35 B 499 SER LEU SER GLY ALA GLY TYR THR ALA GLY GLN GLN LEU SEQRES 36 B 499 THR GLU VAL ILE GLY CYS THR THR VAL THR VAL GLY SER SEQRES 37 B 499 ASP GLY ASN VAL PRO VAL PRO MET ALA GLY GLY LEU PRO SEQRES 38 B 499 ARG VAL LEU TYR PRO THR GLU LYS LEU ALA GLY SER LYS SEQRES 39 B 499 ILE CYS SER SER SER HET NAG A 501 14 HET EDO A 502 4 HET EDO A 503 4 HET CA A 504 1 HET NAG B 501 14 HET EDO B 502 4 HET CA B 503 1 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM EDO 1,2-ETHANEDIOL HETNAM CA CALCIUM ION HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN EDO ETHYLENE GLYCOL FORMUL 3 NAG 2(C8 H15 N O6) FORMUL 4 EDO 3(C2 H6 O2) FORMUL 6 CA 2(CA 2+) FORMUL 10 HOH *518(H2 O) HELIX 1 AA1 THR A 2 ARG A 7 1 6 HELIX 2 AA2 LEU A 15 ALA A 20 1 6 HELIX 3 AA3 ASN A 31 GLN A 35 5 5 HELIX 4 AA4 THR A 41 LYS A 48 1 8 HELIX 5 AA5 LYS A 48 GLY A 54 1 7 HELIX 6 AA6 GLU A 92 GLY A 95 5 4 HELIX 7 AA7 THR A 96 ARG A 110 1 15 HELIX 8 AA8 ALA A 128 VAL A 132 5 5 HELIX 9 AA9 ASP A 133 PHE A 137 5 5 HELIX 10 AB1 SER A 142 PHE A 146 5 5 HELIX 11 AB2 ASP A 157 CYS A 164 1 8 HELIX 12 AB3 LYS A 180 SER A 199 1 20 HELIX 13 AB4 THR A 207 VAL A 211 5 5 HELIX 14 AB5 GLN A 212 ASP A 214 5 3 HELIX 15 AB6 PHE A 215 GLY A 224 1 10 HELIX 16 AB7 ASP A 235 CYS A 240 1 6 HELIX 17 AB8 PRO A 241 VAL A 245 5 5 HELIX 18 AB9 ASN A 251 LYS A 263 1 13 HELIX 19 AC1 SER A 268 CYS A 283 1 16 HELIX 20 AC2 ASP A 285 LEU A 288 5 4 HELIX 21 AC3 ARG A 300 THR A 305 1 6 HELIX 22 AC4 ASP A 307 ASN A 321 1 15 HELIX 23 AC5 GLY A 330 HIS A 334 5 5 HELIX 24 AC6 ALA A 346 GLY A 351 5 6 HELIX 25 AC7 SER A 356 ASP A 376 1 21 HELIX 26 AC8 GLY A 378 TYR A 382 5 5 HELIX 27 AC9 GLU A 467 ALA A 470 5 4 HELIX 28 AD1 THR B 2 ARG B 7 1 6 HELIX 29 AD2 LEU B 15 ALA B 20 1 6 HELIX 30 AD3 ASN B 31 GLN B 35 5 5 HELIX 31 AD4 THR B 41 LYS B 48 1 8 HELIX 32 AD5 LYS B 48 GLY B 54 1 7 HELIX 33 AD6 GLU B 92 GLY B 95 5 4 HELIX 34 AD7 THR B 96 ARG B 110 1 15 HELIX 35 AD8 ALA B 128 VAL B 132 5 5 HELIX 36 AD9 ASP B 133 PHE B 137 5 5 HELIX 37 AE1 SER B 142 PHE B 146 5 5 HELIX 38 AE2 ASP B 157 CYS B 164 1 8 HELIX 39 AE3 LYS B 180 SER B 199 1 20 HELIX 40 AE4 THR B 207 VAL B 211 5 5 HELIX 41 AE5 GLN B 212 ASP B 214 5 3 HELIX 42 AE6 PHE B 215 GLY B 224 1 10 HELIX 43 AE7 ASP B 235 CYS B 240 1 6 HELIX 44 AE8 PRO B 241 VAL B 245 5 5 HELIX 45 AE9 ASN B 251 LYS B 263 1 13 HELIX 46 AF1 SER B 268 CYS B 283 1 16 HELIX 47 AF2 ASP B 285 LEU B 288 5 4 HELIX 48 AF3 ARG B 300 THR B 305 1 6 HELIX 49 AF4 ASP B 307 ASN B 321 1 15 HELIX 50 AF5 GLY B 330 HIS B 334 5 5 HELIX 51 AF6 ALA B 346 GLY B 351 5 6 HELIX 52 AF7 SER B 356 ASP B 376 1 21 HELIX 53 AF8 GLU B 467 ALA B 470 5 4 SHEET 1 AA1 8 GLY A 248 VAL A 249 0 SHEET 2 AA1 8 TYR A 226 GLY A 229 1 N GLY A 229 O GLY A 248 SHEET 3 AA1 8 GLY A 202 ILE A 205 1 N LEU A 203 O ILE A 228 SHEET 4 AA1 8 TYR A 113 VAL A 118 1 N VAL A 118 O ARG A 204 SHEET 5 AA1 8 ALA A 59 ILE A 62 1 N ILE A 60 O MET A 115 SHEET 6 AA1 8 ILE A 11 LEU A 14 1 N LEU A 14 O TRP A 61 SHEET 7 AA1 8 ILE A 324 TYR A 328 1 O PRO A 325 N ILE A 11 SHEET 8 AA1 8 GLY A 290 THR A 291 1 N THR A 291 O ILE A 326 SHEET 1 AA2 2 THR A 66 GLN A 68 0 SHEET 2 AA2 2 GLN A 84 LEU A 90 -1 O GLN A 85 N ALA A 67 SHEET 1 AA3 3 TYR A 125 ASP A 126 0 SHEET 2 AA3 3 VAL A 171 LEU A 173 -1 O SER A 172 N TYR A 125 SHEET 3 AA3 3 LEU A 166 GLY A 167 -1 N LEU A 166 O LEU A 173 SHEET 1 AA4 6 TRP A 385 ASP A 390 0 SHEET 2 AA4 6 THR A 393 LYS A 398 -1 O ARG A 397 N TRP A 385 SHEET 3 AA4 6 ILE A 405 SER A 410 -1 O LEU A 409 N ILE A 394 SHEET 4 AA4 6 ARG A 461 PRO A 465 -1 O LEU A 463 N VAL A 406 SHEET 5 AA4 6 GLN A 433 GLU A 436 -1 N THR A 435 O TYR A 464 SHEET 6 AA4 6 THR A 441 THR A 444 -1 O THR A 441 N GLU A 436 SHEET 1 AA5 2 TYR A 419 LEU A 423 0 SHEET 2 AA5 2 VAL A 451 MET A 455 -1 O MET A 455 N TYR A 419 SHEET 1 AA6 8 GLY B 248 VAL B 249 0 SHEET 2 AA6 8 TYR B 226 GLY B 229 1 N GLY B 229 O GLY B 248 SHEET 3 AA6 8 GLY B 202 ILE B 205 1 N ILE B 205 O ILE B 228 SHEET 4 AA6 8 TYR B 113 VAL B 118 1 N VAL B 118 O ARG B 204 SHEET 5 AA6 8 ALA B 59 ILE B 62 1 N ILE B 60 O MET B 115 SHEET 6 AA6 8 ILE B 11 LEU B 14 1 N LEU B 14 O TRP B 61 SHEET 7 AA6 8 ILE B 324 TYR B 328 1 O PRO B 325 N ILE B 11 SHEET 8 AA6 8 GLY B 290 THR B 291 1 N THR B 291 O ILE B 326 SHEET 1 AA7 2 THR B 66 GLN B 68 0 SHEET 2 AA7 2 GLN B 84 LEU B 90 -1 O GLN B 85 N ALA B 67 SHEET 1 AA8 3 TYR B 125 ASP B 126 0 SHEET 2 AA8 3 VAL B 171 LEU B 173 -1 O SER B 172 N TYR B 125 SHEET 3 AA8 3 LEU B 166 GLY B 167 -1 N LEU B 166 O LEU B 173 SHEET 1 AA9 6 TRP B 385 ASP B 390 0 SHEET 2 AA9 6 THR B 393 LYS B 398 -1 O ARG B 397 N TRP B 385 SHEET 3 AA9 6 ILE B 405 SER B 410 -1 O LEU B 409 N ILE B 394 SHEET 4 AA9 6 ARG B 461 PRO B 465 -1 O LEU B 463 N VAL B 406 SHEET 5 AA9 6 GLN B 433 GLU B 436 -1 N THR B 435 O TYR B 464 SHEET 6 AA9 6 THR B 441 THR B 444 -1 O VAL B 443 N LEU B 434 SHEET 1 AB1 2 TYR B 419 LEU B 423 0 SHEET 2 AB1 2 VAL B 451 MET B 455 -1 O VAL B 451 N LEU B 423 SSBOND 1 CYS A 30 CYS A 38 1555 1555 2.19 SSBOND 2 CYS A 150 CYS A 164 1555 1555 2.14 SSBOND 3 CYS A 240 CYS A 283 1555 1555 2.01 SSBOND 4 CYS A 440 CYS A 475 1555 1555 2.15 SSBOND 5 CYS B 30 CYS B 38 1555 1555 2.15 SSBOND 6 CYS B 150 CYS B 164 1555 1555 2.14 SSBOND 7 CYS B 240 CYS B 283 1555 1555 2.01 SSBOND 8 CYS B 440 CYS B 475 1555 1555 2.15 LINK ND2 ASN A 197 C1 NAG A 501 1555 1555 1.44 LINK ND2 ASN B 197 C1 NAG B 501 1555 1555 1.46 LINK OD1 ASN A 121 CA CA A 504 1555 1555 2.35 LINK O GLU A 162 CA CA A 504 1555 1555 2.41 LINK OD1 ASP A 175 CA CA A 504 1555 1555 2.57 LINK OD2 ASP A 175 CA CA A 504 1555 1555 2.48 LINK O HIS A 210 CA CA A 504 1555 1555 2.34 LINK CA CA A 504 O HOH A 714 1555 1555 2.40 LINK CA CA A 504 O HOH A 716 1555 1555 2.46 LINK CA CA A 504 O HOH A 771 1555 1555 2.41 LINK OD1 ASN B 121 CA CA B 503 1555 1555 2.29 LINK O GLU B 162 CA CA B 503 1555 1555 2.36 LINK OD1 ASP B 175 CA CA B 503 1555 1555 2.57 LINK OD2 ASP B 175 CA CA B 503 1555 1555 2.42 LINK O HIS B 210 CA CA B 503 1555 1555 2.37 LINK CA CA B 503 O HOH B 679 1555 1555 2.45 LINK CA CA B 503 O HOH B 712 1555 1555 2.54 LINK CA CA B 503 O HOH B 760 1555 1555 2.40 CISPEP 1 LYS A 138 PRO A 139 0 5.52 CISPEP 2 ASP A 340 PRO A 341 0 9.09 CISPEP 3 LYS B 138 PRO B 139 0 4.02 CISPEP 4 ASP B 340 PRO B 341 0 8.84 CRYST1 65.230 103.113 75.229 90.00 103.58 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015330 0.000000 0.003703 0.00000 SCALE2 0.000000 0.009698 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013675 0.00000