data_6YR1 # _entry.id 6YR1 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6YR1 pdb_00006yr1 10.2210/pdb6yr1/pdb WWPDB D_1292107757 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2021-04-28 2 'Structure model' 1 1 2024-01-24 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' 'Derived calculations' 4 2 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' atom_type 2 2 'Structure model' chem_comp_atom 3 2 'Structure model' chem_comp_bond 4 2 'Structure model' database_2 5 2 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_atom_type.pdbx_N_electrons' 2 2 'Structure model' '_atom_type.pdbx_scat_Z' 3 2 'Structure model' '_database_2.pdbx_DOI' 4 2 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6YR1 _pdbx_database_status.recvd_initial_deposition_date 2020-04-18 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible N # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type PDB 'same TetR(D) complex' 4ABZ unspecified PDB 'same TetR(D) other tetracycline' 1ORK unspecified SASBDB 'TetR(D) in complex with anhydrotetracycline' SASDFE5 'associated SAS data' # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Hinrichs, W.' 1 0000-0002-0435-4565 'Stary, K.' 2 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'to be published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'TetR(D) soaked with Tigecycline' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Hinrichs, W.' 1 0000-0002-0435-4565 primary 'Stary, K.' 2 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Tetracycline repressor protein class D' 23288.334 1 ? A2S ? 'stop codon at 209, C-terminal truncation to improve crystallization' 2 non-polymer syn TIGECYCLINE 587.665 1 ? ? ? ? 3 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 4 non-polymer syn 'CHLORIDE ION' 35.453 3 ? ? ? ? 5 water nat water 18.015 25 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;SRLNRESVIDAALELLNETGIDGLTTRKLAQKLGIEQPTLYWHVKNKRALLDALAVEILARHHDYSLPAAGESWQSFLRN NAMSFRRALLRYRDGAKVHLGTRPDEKQYDTVETQLRFMTENGFSLRDGLYAISAVSHFTLGAVLEQQEHTAALTDRPAA PDENLPPLLREALQIMDSDDGEQAFLHGLESLIRGFEVQLTALLQIV ; _entity_poly.pdbx_seq_one_letter_code_can ;SRLNRESVIDAALELLNETGIDGLTTRKLAQKLGIEQPTLYWHVKNKRALLDALAVEILARHHDYSLPAAGESWQSFLRN NAMSFRRALLRYRDGAKVHLGTRPDEKQYDTVETQLRFMTENGFSLRDGLYAISAVSHFTLGAVLEQQEHTAALTDRPAA PDENLPPLLREALQIMDSDDGEQAFLHGLESLIRGFEVQLTALLQIV ; _entity_poly.pdbx_strand_id AAA _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 TIGECYCLINE T1C 3 'MAGNESIUM ION' MG 4 'CHLORIDE ION' CL 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 ARG n 1 3 LEU n 1 4 ASN n 1 5 ARG n 1 6 GLU n 1 7 SER n 1 8 VAL n 1 9 ILE n 1 10 ASP n 1 11 ALA n 1 12 ALA n 1 13 LEU n 1 14 GLU n 1 15 LEU n 1 16 LEU n 1 17 ASN n 1 18 GLU n 1 19 THR n 1 20 GLY n 1 21 ILE n 1 22 ASP n 1 23 GLY n 1 24 LEU n 1 25 THR n 1 26 THR n 1 27 ARG n 1 28 LYS n 1 29 LEU n 1 30 ALA n 1 31 GLN n 1 32 LYS n 1 33 LEU n 1 34 GLY n 1 35 ILE n 1 36 GLU n 1 37 GLN n 1 38 PRO n 1 39 THR n 1 40 LEU n 1 41 TYR n 1 42 TRP n 1 43 HIS n 1 44 VAL n 1 45 LYS n 1 46 ASN n 1 47 LYS n 1 48 ARG n 1 49 ALA n 1 50 LEU n 1 51 LEU n 1 52 ASP n 1 53 ALA n 1 54 LEU n 1 55 ALA n 1 56 VAL n 1 57 GLU n 1 58 ILE n 1 59 LEU n 1 60 ALA n 1 61 ARG n 1 62 HIS n 1 63 HIS n 1 64 ASP n 1 65 TYR n 1 66 SER n 1 67 LEU n 1 68 PRO n 1 69 ALA n 1 70 ALA n 1 71 GLY n 1 72 GLU n 1 73 SER n 1 74 TRP n 1 75 GLN n 1 76 SER n 1 77 PHE n 1 78 LEU n 1 79 ARG n 1 80 ASN n 1 81 ASN n 1 82 ALA n 1 83 MET n 1 84 SER n 1 85 PHE n 1 86 ARG n 1 87 ARG n 1 88 ALA n 1 89 LEU n 1 90 LEU n 1 91 ARG n 1 92 TYR n 1 93 ARG n 1 94 ASP n 1 95 GLY n 1 96 ALA n 1 97 LYS n 1 98 VAL n 1 99 HIS n 1 100 LEU n 1 101 GLY n 1 102 THR n 1 103 ARG n 1 104 PRO n 1 105 ASP n 1 106 GLU n 1 107 LYS n 1 108 GLN n 1 109 TYR n 1 110 ASP n 1 111 THR n 1 112 VAL n 1 113 GLU n 1 114 THR n 1 115 GLN n 1 116 LEU n 1 117 ARG n 1 118 PHE n 1 119 MET n 1 120 THR n 1 121 GLU n 1 122 ASN n 1 123 GLY n 1 124 PHE n 1 125 SER n 1 126 LEU n 1 127 ARG n 1 128 ASP n 1 129 GLY n 1 130 LEU n 1 131 TYR n 1 132 ALA n 1 133 ILE n 1 134 SER n 1 135 ALA n 1 136 VAL n 1 137 SER n 1 138 HIS n 1 139 PHE n 1 140 THR n 1 141 LEU n 1 142 GLY n 1 143 ALA n 1 144 VAL n 1 145 LEU n 1 146 GLU n 1 147 GLN n 1 148 GLN n 1 149 GLU n 1 150 HIS n 1 151 THR n 1 152 ALA n 1 153 ALA n 1 154 LEU n 1 155 THR n 1 156 ASP n 1 157 ARG n 1 158 PRO n 1 159 ALA n 1 160 ALA n 1 161 PRO n 1 162 ASP n 1 163 GLU n 1 164 ASN n 1 165 LEU n 1 166 PRO n 1 167 PRO n 1 168 LEU n 1 169 LEU n 1 170 ARG n 1 171 GLU n 1 172 ALA n 1 173 LEU n 1 174 GLN n 1 175 ILE n 1 176 MET n 1 177 ASP n 1 178 SER n 1 179 ASP n 1 180 ASP n 1 181 GLY n 1 182 GLU n 1 183 GLN n 1 184 ALA n 1 185 PHE n 1 186 LEU n 1 187 HIS n 1 188 GLY n 1 189 LEU n 1 190 GLU n 1 191 SER n 1 192 LEU n 1 193 ILE n 1 194 ARG n 1 195 GLY n 1 196 PHE n 1 197 GLU n 1 198 VAL n 1 199 GLN n 1 200 LEU n 1 201 THR n 1 202 ALA n 1 203 LEU n 1 204 LEU n 1 205 GLN n 1 206 ILE n 1 207 VAL n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 207 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene tetR _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details 'RA1 plasmid' _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 562 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli K-12' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 83333 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details pWH1950 _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 T1C non-polymer . TIGECYCLINE ? 'C29 H41 N5 O8 2' 587.665 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 2 2 SER SER AAA . n A 1 2 ARG 2 3 3 ARG ARG AAA . n A 1 3 LEU 3 4 4 LEU LEU AAA . n A 1 4 ASN 4 5 5 ASN ASN AAA . n A 1 5 ARG 5 6 6 ARG ARG AAA . n A 1 6 GLU 6 7 7 GLU GLU AAA . n A 1 7 SER 7 8 8 SER SER AAA . n A 1 8 VAL 8 9 9 VAL VAL AAA . n A 1 9 ILE 9 10 10 ILE ILE AAA . n A 1 10 ASP 10 11 11 ASP ASP AAA . n A 1 11 ALA 11 12 12 ALA ALA AAA . n A 1 12 ALA 12 13 13 ALA ALA AAA . n A 1 13 LEU 13 14 14 LEU LEU AAA . n A 1 14 GLU 14 15 15 GLU GLU AAA . n A 1 15 LEU 15 16 16 LEU LEU AAA . n A 1 16 LEU 16 17 17 LEU LEU AAA . n A 1 17 ASN 17 18 18 ASN ASN AAA . n A 1 18 GLU 18 19 19 GLU GLU AAA . n A 1 19 THR 19 20 20 THR THR AAA . n A 1 20 GLY 20 21 21 GLY GLY AAA . n A 1 21 ILE 21 22 22 ILE ILE AAA . n A 1 22 ASP 22 23 23 ASP ASP AAA . n A 1 23 GLY 23 24 24 GLY GLY AAA . n A 1 24 LEU 24 25 25 LEU LEU AAA . n A 1 25 THR 25 26 26 THR THR AAA . n A 1 26 THR 26 27 27 THR THR AAA . n A 1 27 ARG 27 28 28 ARG ARG AAA . n A 1 28 LYS 28 29 29 LYS LYS AAA . n A 1 29 LEU 29 30 30 LEU LEU AAA . n A 1 30 ALA 30 31 31 ALA ALA AAA . n A 1 31 GLN 31 32 32 GLN GLN AAA . n A 1 32 LYS 32 33 33 LYS LYS AAA . n A 1 33 LEU 33 34 34 LEU LEU AAA . n A 1 34 GLY 34 35 35 GLY GLY AAA . n A 1 35 ILE 35 36 36 ILE ILE AAA . n A 1 36 GLU 36 37 37 GLU GLU AAA . n A 1 37 GLN 37 38 38 GLN GLN AAA . n A 1 38 PRO 38 39 39 PRO PRO AAA . n A 1 39 THR 39 40 40 THR THR AAA . n A 1 40 LEU 40 41 41 LEU LEU AAA . n A 1 41 TYR 41 42 42 TYR TYR AAA . n A 1 42 TRP 42 43 43 TRP TRP AAA . n A 1 43 HIS 43 44 44 HIS HIS AAA . n A 1 44 VAL 44 45 45 VAL VAL AAA . n A 1 45 LYS 45 46 46 LYS LYS AAA . n A 1 46 ASN 46 47 47 ASN ASN AAA . n A 1 47 LYS 47 48 48 LYS LYS AAA . n A 1 48 ARG 48 49 49 ARG ARG AAA . n A 1 49 ALA 49 50 50 ALA ALA AAA . n A 1 50 LEU 50 51 51 LEU LEU AAA . n A 1 51 LEU 51 52 52 LEU LEU AAA . n A 1 52 ASP 52 53 53 ASP ASP AAA . n A 1 53 ALA 53 54 54 ALA ALA AAA . n A 1 54 LEU 54 55 55 LEU LEU AAA . n A 1 55 ALA 55 56 56 ALA ALA AAA . n A 1 56 VAL 56 57 57 VAL VAL AAA . n A 1 57 GLU 57 58 58 GLU GLU AAA . n A 1 58 ILE 58 59 59 ILE ILE AAA . n A 1 59 LEU 59 60 60 LEU LEU AAA . n A 1 60 ALA 60 61 61 ALA ALA AAA . n A 1 61 ARG 61 62 62 ARG ARG AAA . n A 1 62 HIS 62 63 63 HIS HIS AAA . n A 1 63 HIS 63 64 64 HIS HIS AAA . n A 1 64 ASP 64 65 65 ASP ASP AAA . n A 1 65 TYR 65 66 66 TYR TYR AAA . n A 1 66 SER 66 67 67 SER SER AAA . n A 1 67 LEU 67 68 68 LEU LEU AAA . n A 1 68 PRO 68 69 69 PRO PRO AAA . n A 1 69 ALA 69 70 70 ALA ALA AAA . n A 1 70 ALA 70 71 71 ALA ALA AAA . n A 1 71 GLY 71 72 72 GLY GLY AAA . n A 1 72 GLU 72 73 73 GLU GLU AAA . n A 1 73 SER 73 74 74 SER SER AAA . n A 1 74 TRP 74 75 75 TRP TRP AAA . n A 1 75 GLN 75 76 76 GLN GLN AAA . n A 1 76 SER 76 77 77 SER SER AAA . n A 1 77 PHE 77 78 78 PHE PHE AAA . n A 1 78 LEU 78 79 79 LEU LEU AAA . n A 1 79 ARG 79 80 80 ARG ARG AAA . n A 1 80 ASN 80 81 81 ASN ASN AAA . n A 1 81 ASN 81 82 82 ASN ASN AAA . n A 1 82 ALA 82 83 83 ALA ALA AAA . n A 1 83 MET 83 84 84 MET MET AAA . n A 1 84 SER 84 85 85 SER SER AAA . n A 1 85 PHE 85 86 86 PHE PHE AAA . n A 1 86 ARG 86 87 87 ARG ARG AAA . n A 1 87 ARG 87 88 88 ARG ARG AAA . n A 1 88 ALA 88 89 89 ALA ALA AAA . n A 1 89 LEU 89 90 90 LEU LEU AAA . n A 1 90 LEU 90 91 91 LEU LEU AAA . n A 1 91 ARG 91 92 92 ARG ARG AAA . n A 1 92 TYR 92 93 93 TYR TYR AAA . n A 1 93 ARG 93 94 94 ARG ARG AAA . n A 1 94 ASP 94 95 95 ASP ASP AAA . n A 1 95 GLY 95 96 96 GLY GLY AAA . n A 1 96 ALA 96 97 97 ALA ALA AAA . n A 1 97 LYS 97 98 98 LYS LYS AAA . n A 1 98 VAL 98 99 99 VAL VAL AAA . n A 1 99 HIS 99 100 100 HIS HIS AAA . n A 1 100 LEU 100 101 101 LEU LEU AAA . n A 1 101 GLY 101 102 102 GLY GLY AAA . n A 1 102 THR 102 103 103 THR THR AAA . n A 1 103 ARG 103 104 104 ARG ARG AAA . n A 1 104 PRO 104 105 105 PRO PRO AAA . n A 1 105 ASP 105 106 106 ASP ASP AAA . n A 1 106 GLU 106 107 107 GLU GLU AAA . n A 1 107 LYS 107 108 108 LYS LYS AAA . n A 1 108 GLN 108 109 109 GLN GLN AAA . n A 1 109 TYR 109 110 110 TYR TYR AAA . n A 1 110 ASP 110 111 111 ASP ASP AAA . n A 1 111 THR 111 112 112 THR THR AAA . n A 1 112 VAL 112 113 113 VAL VAL AAA . n A 1 113 GLU 113 114 114 GLU GLU AAA . n A 1 114 THR 114 115 115 THR THR AAA . n A 1 115 GLN 115 116 116 GLN GLN AAA . n A 1 116 LEU 116 117 117 LEU LEU AAA . n A 1 117 ARG 117 118 118 ARG ARG AAA . n A 1 118 PHE 118 119 119 PHE PHE AAA . n A 1 119 MET 119 120 120 MET MET AAA . n A 1 120 THR 120 121 121 THR THR AAA . n A 1 121 GLU 121 122 122 GLU GLU AAA . n A 1 122 ASN 122 123 123 ASN ASN AAA . n A 1 123 GLY 123 124 124 GLY GLY AAA . n A 1 124 PHE 124 125 125 PHE PHE AAA . n A 1 125 SER 125 126 126 SER SER AAA . n A 1 126 LEU 126 127 127 LEU LEU AAA . n A 1 127 ARG 127 128 128 ARG ARG AAA . n A 1 128 ASP 128 129 129 ASP ASP AAA . n A 1 129 GLY 129 130 130 GLY GLY AAA . n A 1 130 LEU 130 131 131 LEU LEU AAA . n A 1 131 TYR 131 132 132 TYR TYR AAA . n A 1 132 ALA 132 133 133 ALA ALA AAA . n A 1 133 ILE 133 134 134 ILE ILE AAA . n A 1 134 SER 134 135 135 SER SER AAA . n A 1 135 ALA 135 136 136 ALA ALA AAA . n A 1 136 VAL 136 137 137 VAL VAL AAA . n A 1 137 SER 137 138 138 SER SER AAA . n A 1 138 HIS 138 139 139 HIS HIS AAA . n A 1 139 PHE 139 140 140 PHE PHE AAA . n A 1 140 THR 140 141 141 THR THR AAA . n A 1 141 LEU 141 142 142 LEU LEU AAA . n A 1 142 GLY 142 143 143 GLY GLY AAA . n A 1 143 ALA 143 144 144 ALA ALA AAA . n A 1 144 VAL 144 145 145 VAL VAL AAA . n A 1 145 LEU 145 146 146 LEU LEU AAA . n A 1 146 GLU 146 147 147 GLU GLU AAA . n A 1 147 GLN 147 148 148 GLN GLN AAA . n A 1 148 GLN 148 149 149 GLN GLN AAA . n A 1 149 GLU 149 150 150 GLU GLU AAA . n A 1 150 HIS 150 151 151 HIS HIS AAA . n A 1 151 THR 151 152 152 THR THR AAA . n A 1 152 ALA 152 153 ? ? ? AAA . n A 1 153 ALA 153 154 ? ? ? AAA . n A 1 154 LEU 154 155 ? ? ? AAA . n A 1 155 THR 155 156 ? ? ? AAA . n A 1 156 ASP 156 157 ? ? ? AAA . n A 1 157 ARG 157 158 ? ? ? AAA . n A 1 158 PRO 158 159 ? ? ? AAA . n A 1 159 ALA 159 160 ? ? ? AAA . n A 1 160 ALA 160 161 ? ? ? AAA . n A 1 161 PRO 161 162 ? ? ? AAA . n A 1 162 ASP 162 163 ? ? ? AAA . n A 1 163 GLU 163 164 164 GLU GLU AAA . n A 1 164 ASN 164 165 165 ASN ASN AAA . n A 1 165 LEU 165 166 166 LEU LEU AAA . n A 1 166 PRO 166 167 167 PRO PRO AAA . n A 1 167 PRO 167 168 168 PRO PRO AAA . n A 1 168 LEU 168 169 169 LEU LEU AAA . n A 1 169 LEU 169 170 170 LEU LEU AAA . n A 1 170 ARG 170 171 171 ARG ARG AAA . n A 1 171 GLU 171 172 172 GLU GLU AAA . n A 1 172 ALA 172 173 173 ALA ALA AAA . n A 1 173 LEU 173 174 174 LEU LEU AAA . n A 1 174 GLN 174 175 175 GLN GLN AAA . n A 1 175 ILE 175 176 176 ILE ILE AAA . n A 1 176 MET 176 177 177 MET MET AAA . n A 1 177 ASP 177 178 178 ASP ASP AAA . n A 1 178 SER 178 179 179 SER SER AAA . n A 1 179 ASP 179 180 180 ASP ASP AAA . n A 1 180 ASP 180 181 181 ASP ASP AAA . n A 1 181 GLY 181 182 182 GLY GLY AAA . n A 1 182 GLU 182 183 183 GLU GLU AAA . n A 1 183 GLN 183 184 184 GLN GLN AAA . n A 1 184 ALA 184 185 185 ALA ALA AAA . n A 1 185 PHE 185 186 186 PHE PHE AAA . n A 1 186 LEU 186 187 187 LEU LEU AAA . n A 1 187 HIS 187 188 188 HIS HIS AAA . n A 1 188 GLY 188 189 189 GLY GLY AAA . n A 1 189 LEU 189 190 190 LEU LEU AAA . n A 1 190 GLU 190 191 191 GLU GLU AAA . n A 1 191 SER 191 192 192 SER SER AAA . n A 1 192 LEU 192 193 193 LEU LEU AAA . n A 1 193 ILE 193 194 194 ILE ILE AAA . n A 1 194 ARG 194 195 195 ARG ARG AAA . n A 1 195 GLY 195 196 196 GLY GLY AAA . n A 1 196 PHE 196 197 197 PHE PHE AAA . n A 1 197 GLU 197 198 198 GLU GLU AAA . n A 1 198 VAL 198 199 199 VAL VAL AAA . n A 1 199 GLN 199 200 200 GLN GLN AAA . n A 1 200 LEU 200 201 201 LEU LEU AAA . n A 1 201 THR 201 202 202 THR THR AAA . n A 1 202 ALA 202 203 203 ALA ALA AAA . n A 1 203 LEU 203 204 204 LEU LEU AAA . n A 1 204 LEU 204 205 205 LEU LEU AAA . n A 1 205 GLN 205 206 206 GLN GLN AAA . n A 1 206 ILE 206 207 207 ILE ILE AAA . n A 1 207 VAL 207 208 208 VAL VAL AAA . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 T1C 1 301 1209 T1C T1C AAA . C 3 MG 1 302 1210 MG MG AAA . D 4 CL 1 303 1211 CL CL AAA . E 4 CL 1 304 1212 CL CL AAA . F 4 CL 1 305 1213 CL CL AAA . G 5 HOH 1 401 2026 HOH HOH AAA . G 5 HOH 2 402 2009 HOH HOH AAA . G 5 HOH 3 403 2003 HOH HOH AAA . G 5 HOH 4 404 2029 HOH HOH AAA . G 5 HOH 5 405 2024 HOH HOH AAA . G 5 HOH 6 406 2022 HOH HOH AAA . G 5 HOH 7 407 2025 HOH HOH AAA . G 5 HOH 8 408 2039 HOH HOH AAA . G 5 HOH 9 409 2032 HOH HOH AAA . G 5 HOH 10 410 2023 HOH HOH AAA . G 5 HOH 11 411 2001 HOH HOH AAA . G 5 HOH 12 412 2028 HOH HOH AAA . G 5 HOH 13 413 2027 HOH HOH AAA . G 5 HOH 14 414 2030 HOH HOH AAA . G 5 HOH 15 415 2031 HOH HOH AAA . G 5 HOH 16 416 2033 HOH HOH AAA . G 5 HOH 17 417 2017 HOH HOH AAA . G 5 HOH 18 418 2006 HOH HOH AAA . G 5 HOH 19 419 2037 HOH HOH AAA . G 5 HOH 20 420 2002 HOH HOH AAA . G 5 HOH 21 421 2012 HOH HOH AAA . G 5 HOH 22 422 2034 HOH HOH AAA . G 5 HOH 23 423 2036 HOH HOH AAA . G 5 HOH 24 424 2038 HOH HOH AAA . G 5 HOH 25 425 2035 HOH HOH AAA . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 AAA GLU 107 ? CG ? A GLU 106 CG 2 1 Y 1 AAA GLU 107 ? CD ? A GLU 106 CD 3 1 Y 1 AAA GLU 107 ? OE1 ? A GLU 106 OE1 4 1 Y 1 AAA GLU 107 ? OE2 ? A GLU 106 OE2 5 1 Y 1 AAA THR 152 ? OG1 ? A THR 151 OG1 6 1 Y 1 AAA THR 152 ? CG2 ? A THR 151 CG2 7 1 Y 1 AAA GLU 164 ? CG ? A GLU 163 CG 8 1 Y 1 AAA GLU 164 ? CD ? A GLU 163 CD 9 1 Y 1 AAA GLU 164 ? OE1 ? A GLU 163 OE1 10 1 Y 1 AAA GLU 164 ? OE2 ? A GLU 163 OE2 # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0258 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? CrystalClear ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? CrystalClear ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 6YR1 _cell.details ? _cell.formula_units_Z ? _cell.length_a 68.459 _cell.length_a_esd ? _cell.length_b 68.459 _cell.length_b_esd ? _cell.length_c 180.440 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 16 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6YR1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 98 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 41 2 2' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6YR1 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.27 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 45.80 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details 'Native crystal soaked in 1M (NH4)2SO4, 0.2M NaCl, 0.05M Tris/HCl, pH 7.0, 0.0142 mM Tigecycline, 2mM MgCl2, 22days' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details mirror _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'RIGAKU SATURN 70' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2009-10-21 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator 'Osmic mirror' _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source 'ROTATING ANODE' _diffrn_source.target ? _diffrn_source.type 'RIGAKU MICROMAX-007' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.5418 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_synchrotron_site ? # _reflns.B_iso_Wilson_estimate 59 _reflns.entry_id 6YR1 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.3 _reflns.d_resolution_low 31. _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 9565 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 96.0 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 5.83 _reflns.pdbx_Rmerge_I_obs 0.081 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 11.0 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared 0.97 _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.30 _reflns_shell.d_res_low 2.38 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 1.8 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 863 _reflns_shell.percent_possible_all 88.6 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.498 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 3.56 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared 0.82 _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] 1.301 _refine.aniso_B[1][2] -0.000 _refine.aniso_B[1][3] -0.000 _refine.aniso_B[2][2] 1.301 _refine.aniso_B[2][3] -0.000 _refine.aniso_B[3][3] -2.601 _refine.B_iso_max ? _refine.B_iso_mean 66.175 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.956 _refine.correlation_coeff_Fo_to_Fc_free 0.930 _refine.details 'Hydrogens have been added in their riding positions' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6YR1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.300 _refine.ls_d_res_low 30.20 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 9560 _refine.ls_number_reflns_R_free 704 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 95.849 _refine.ls_percent_reflns_R_free 7.364 _refine.ls_R_factor_all 0.237 _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_free 0.2792 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2333 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 2xpv _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.464 _refine.pdbx_overall_ESU_R_Free 0.286 _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 26.982 _refine.overall_SU_ML 0.284 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1555 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 46 _refine_hist.number_atoms_solvent 25 _refine_hist.number_atoms_total 1626 _refine_hist.d_res_high 2.300 _refine_hist.d_res_low 30.20 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.008 0.012 1626 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 1.765 1.676 2210 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 6.787 5.000 194 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 36.646 21.383 94 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 19.517 15.000 277 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 15.741 15.000 15 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.129 0.200 209 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.008 0.020 1260 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.253 0.200 747 ? r_nbd_refined ? ? 'X-RAY DIFFRACTION' ? 0.319 0.200 1107 ? r_nbtor_refined ? ? 'X-RAY DIFFRACTION' ? 0.136 0.200 61 ? r_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? 0.119 0.200 2 ? r_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? 0.240 0.200 82 ? r_symmetry_nbd_refined ? ? 'X-RAY DIFFRACTION' ? 0.174 0.200 5 ? r_symmetry_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? 4.285 5.526 782 ? r_mcbond_it ? ? 'X-RAY DIFFRACTION' ? 6.099 8.266 974 ? r_mcangle_it ? ? 'X-RAY DIFFRACTION' ? 5.008 5.877 843 ? r_scbond_it ? ? 'X-RAY DIFFRACTION' ? 6.959 8.649 1235 ? r_scangle_it ? ? 'X-RAY DIFFRACTION' ? 9.047 74.304 2454 ? r_lrange_it ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.300 2.360 . . 54 576 87.0166 . . . 0.297 . 0.330 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.360 2.424 . . 54 609 94.5792 . . . 0.334 . 0.305 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.424 2.495 . . 33 617 96.7262 . . . 0.367 . 0.285 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.495 2.571 . . 49 596 96.8468 . . . 0.399 . 0.313 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.571 2.656 . . 38 580 96.5625 . . . 0.391 . 0.299 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.656 2.749 . . 43 557 95.3895 . . . 0.392 . 0.271 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.749 2.852 . . 33 554 94.8304 . . . 0.387 . 0.298 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.852 2.968 . . 47 491 95.2212 . . . 0.320 . 0.295 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.968 3.100 . . 36 494 94.3061 . . . 0.373 . 0.297 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.100 3.251 . . 42 466 95.3096 . . . 0.385 . 0.312 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.251 3.426 . . 28 470 94.8571 . . . 0.430 . 0.277 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.426 3.633 . . 38 436 98.7500 . . . 0.299 . 0.287 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.633 3.883 . . 28 423 98.6871 . . . 0.252 . 0.264 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.883 4.193 . . 33 390 98.1439 . . . 0.225 . 0.227 . . . . . . . . . . . 'X-RAY DIFFRACTION' 4.193 4.592 . . 41 362 99.5062 . . . 0.234 . 0.173 . . . . . . . . . . . 'X-RAY DIFFRACTION' 4.592 5.130 . . 30 334 98.9130 . . . 0.307 . 0.158 . . . . . . . . . . . 'X-RAY DIFFRACTION' 5.130 5.918 . . 24 301 99.3884 . . . 0.281 . 0.208 . . . . . . . . . . . 'X-RAY DIFFRACTION' 5.918 7.232 . . 24 261 100.0000 . . . 0.249 . 0.219 . . . . . . . . . . . 'X-RAY DIFFRACTION' 7.232 10.163 . . 16 216 98.7234 . . . 0.159 . 0.155 . . . . . . . . . . . 'X-RAY DIFFRACTION' 10.163 30.2 . . 13 123 91.2752 . . . 0.190 . 0.176 . . . . . . . . . . . # _struct.entry_id 6YR1 _struct.title 'TetR(D) soaked with Tigecycline I4(1)22' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6YR1 _struct_keywords.text TRANSCRIPTION _struct_keywords.pdbx_keywords TRANSCRIPTION # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 4 ? G N N 5 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code TETR4_ECOLX _struct_ref.pdbx_db_accession P0ACT4 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;ARLNRESVIDAALELLNETGIDGLTTRKLAQKLGIEQPTLYWHVKNKRALLDALAVEILARHHDYSLPAAGESWQSFLRN NAMSFRRALLRYRDGAKVHLGTRPDEKQYDTVETQLRFMTENGFSLRDGLYAISAVSHFTLGAVLEQQEHTAALTDRPAA PDENLPPLLREALQIMDSDDGEQAFLHGLESLIRGFEVQLTALLQIV ; _struct_ref.pdbx_align_begin 2 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 6YR1 _struct_ref_seq.pdbx_strand_id AAA _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 207 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P0ACT4 _struct_ref_seq.db_align_beg 2 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 208 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 2 _struct_ref_seq.pdbx_auth_seq_align_end 208 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 6YR1 _struct_ref_seq_dif.mon_id SER _struct_ref_seq_dif.pdbx_pdb_strand_id AAA _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code P0ACT4 _struct_ref_seq_dif.db_mon_id ALA _struct_ref_seq_dif.pdbx_seq_db_seq_num 2 _struct_ref_seq_dif.details 'engineered mutation' _struct_ref_seq_dif.pdbx_auth_seq_num 2 _struct_ref_seq_dif.pdbx_ordinal 1 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 6430 ? 1 MORE -102 ? 1 'SSA (A^2)' 18680 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support SAXS _pdbx_struct_assembly_auth_evidence.details 'crystallographic assembly homodimer' # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 10_665 -x+1,-y+1,z -1.0000000000 0.0000000000 0.0000000000 68.4590000000 0.0000000000 -1.0000000000 0.0000000000 68.4590000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASN A 4 ? LEU A 24 ? ASN AAA 5 LEU AAA 25 1 ? 21 HELX_P HELX_P2 AA2 THR A 25 ? GLY A 34 ? THR AAA 26 GLY AAA 35 1 ? 10 HELX_P HELX_P3 AA3 GLU A 36 ? VAL A 44 ? GLU AAA 37 VAL AAA 45 1 ? 9 HELX_P HELX_P4 AA4 ASN A 46 ? HIS A 63 ? ASN AAA 47 HIS AAA 64 1 ? 18 HELX_P HELX_P5 AA5 SER A 73 ? ARG A 91 ? SER AAA 74 ARG AAA 92 1 ? 19 HELX_P HELX_P6 AA6 ASP A 94 ? LEU A 100 ? ASP AAA 95 LEU AAA 101 1 ? 7 HELX_P HELX_P7 AA7 ASP A 105 ? LYS A 107 ? ASP AAA 106 LYS AAA 108 5 ? 3 HELX_P HELX_P8 AA8 GLN A 108 ? GLU A 121 ? GLN AAA 109 GLU AAA 122 1 ? 14 HELX_P HELX_P9 AA9 SER A 125 ? THR A 151 ? SER AAA 126 THR AAA 152 1 ? 27 HELX_P HELX_P10 AB1 PRO A 166 ? SER A 178 ? PRO AAA 167 SER AAA 179 1 ? 13 HELX_P HELX_P11 AB2 GLY A 181 ? LEU A 203 ? GLY AAA 182 LEU AAA 204 1 ? 23 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? B T1C . O12 ? ? ? 1_555 C MG . MG ? ? AAA T1C 301 AAA MG 302 1_555 ? ? ? ? ? ? ? 1.955 ? ? metalc2 metalc ? ? B T1C . O11 ? ? ? 1_555 C MG . MG ? ? AAA T1C 301 AAA MG 302 1_555 ? ? ? ? ? ? ? 2.175 ? ? metalc3 metalc ? ? C MG . MG ? ? ? 1_555 G HOH . O ? ? AAA MG 302 AAA HOH 403 1_555 ? ? ? ? ? ? ? 1.826 ? ? metalc4 metalc ? ? C MG . MG ? ? ? 1_555 G HOH . O ? ? AAA MG 302 AAA HOH 411 1_555 ? ? ? ? ? ? ? 2.325 ? ? metalc5 metalc ? ? C MG . MG ? ? ? 1_555 G HOH . O ? ? AAA MG 302 AAA HOH 420 1_555 ? ? ? ? ? ? ? 2.008 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O12 ? B T1C . ? AAA T1C 301 ? 1_555 MG ? C MG . ? AAA MG 302 ? 1_555 O11 ? B T1C . ? AAA T1C 301 ? 1_555 75.6 ? 2 O12 ? B T1C . ? AAA T1C 301 ? 1_555 MG ? C MG . ? AAA MG 302 ? 1_555 O ? G HOH . ? AAA HOH 403 ? 1_555 83.3 ? 3 O11 ? B T1C . ? AAA T1C 301 ? 1_555 MG ? C MG . ? AAA MG 302 ? 1_555 O ? G HOH . ? AAA HOH 403 ? 1_555 106.3 ? 4 O12 ? B T1C . ? AAA T1C 301 ? 1_555 MG ? C MG . ? AAA MG 302 ? 1_555 O ? G HOH . ? AAA HOH 411 ? 1_555 94.1 ? 5 O11 ? B T1C . ? AAA T1C 301 ? 1_555 MG ? C MG . ? AAA MG 302 ? 1_555 O ? G HOH . ? AAA HOH 411 ? 1_555 78.1 ? 6 O ? G HOH . ? AAA HOH 403 ? 1_555 MG ? C MG . ? AAA MG 302 ? 1_555 O ? G HOH . ? AAA HOH 411 ? 1_555 174.0 ? 7 O12 ? B T1C . ? AAA T1C 301 ? 1_555 MG ? C MG . ? AAA MG 302 ? 1_555 O ? G HOH . ? AAA HOH 420 ? 1_555 170.3 ? 8 O11 ? B T1C . ? AAA T1C 301 ? 1_555 MG ? C MG . ? AAA MG 302 ? 1_555 O ? G HOH . ? AAA HOH 420 ? 1_555 101.0 ? 9 O ? G HOH . ? AAA HOH 403 ? 1_555 MG ? C MG . ? AAA MG 302 ? 1_555 O ? G HOH . ? AAA HOH 420 ? 1_555 106.4 ? 10 O ? G HOH . ? AAA HOH 411 ? 1_555 MG ? C MG . ? AAA MG 302 ? 1_555 O ? G HOH . ? AAA HOH 420 ? 1_555 76.3 ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN AAA 47 ? ? -172.51 -175.97 2 1 ASN AAA 165 ? ? 78.11 105.04 3 1 LEU AAA 204 ? ? 58.54 -107.65 # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[1][1]_esd _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][2]_esd _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[1][3]_esd _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[2][2]_esd _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.T[2][3]_esd _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[3][3]_esd _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[1][1]_esd _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][2]_esd _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[1][3]_esd _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[2][2]_esd _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.L[2][3]_esd _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[3][3]_esd _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][1]_esd _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][2]_esd _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[1][3]_esd _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][1]_esd _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][2]_esd _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][3]_esd _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][1]_esd _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][2]_esd _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[3][3]_esd 1 'X-RAY DIFFRACTION' ? refined 18.8784 28.1557 13.2917 0.0907 ? 0.0073 ? -0.0354 ? 0.1251 ? -0.0225 ? 0.0396 ? 2.5851 ? -0.5791 ? 1.4431 ? 0.1555 ? -0.5032 ? 2.3444 ? 0.0403 ? 0.1679 ? 0.1660 ? -0.0088 ? -0.0144 ? -0.0315 ? 0.1721 ? 0.0427 ? -0.0259 ? 2 'X-RAY DIFFRACTION' ? refined 24.6656 33.0858 39.8311 0.1011 ? 0.0466 ? -0.0153 ? 0.0888 ? -0.0063 ? 0.0229 ? 0.7691 ? 0.3439 ? 0.3929 ? 0.3314 ? 0.6065 ? 1.3923 ? 0.1028 ? 0.0106 ? 0.0044 ? 0.0021 ? -0.0642 ? 0.0056 ? 0.0015 ? -0.0755 ? -0.0386 ? 3 'X-RAY DIFFRACTION' ? refined 49.1263 19.5858 35.6353 0.3002 ? 0.0775 ? -0.0038 ? 0.0454 ? -0.0055 ? 0.0753 ? 6.4292 ? 1.4114 ? -0.3122 ? 3.4552 ? -4.2050 ? 5.4774 ? 0.3023 ? 0.0375 ? -0.6646 ? -0.3829 ? -0.3158 ? -0.1342 ? 0.6490 ? 0.4142 ? 0.0135 ? # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 1 'X-RAY DIFFRACTION' 1 ? ? AAA 2 ? ? AAA 63 ALL ? 2 'X-RAY DIFFRACTION' 2 ? ? AAA 64 ? ? AAA 152 ALL ? 3 'X-RAY DIFFRACTION' 2 ? ? AAA 182 ? ? AAA 208 ALL ? 4 'X-RAY DIFFRACTION' 2 ? ? AAA 1209 ? ? AAA 1210 ALL ? 5 'X-RAY DIFFRACTION' 3 ? ? AAA 160 ? ? AAA 181 ALL ? # _pdbx_entry_details.entry_id 6YR1 _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 AAA ALA 153 ? A ALA 152 2 1 Y 1 AAA ALA 154 ? A ALA 153 3 1 Y 1 AAA LEU 155 ? A LEU 154 4 1 Y 1 AAA THR 156 ? A THR 155 5 1 Y 1 AAA ASP 157 ? A ASP 156 6 1 Y 1 AAA ARG 158 ? A ARG 157 7 1 Y 1 AAA PRO 159 ? A PRO 158 8 1 Y 1 AAA ALA 160 ? A ALA 159 9 1 Y 1 AAA ALA 161 ? A ALA 160 10 1 Y 1 AAA PRO 162 ? A PRO 161 11 1 Y 1 AAA ASP 163 ? A ASP 162 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CL CL CL N N 74 GLN N N N N 75 GLN CA C N S 76 GLN C C N N 77 GLN O O N N 78 GLN CB C N N 79 GLN CG C N N 80 GLN CD C N N 81 GLN OE1 O N N 82 GLN NE2 N N N 83 GLN OXT O N N 84 GLN H H N N 85 GLN H2 H N N 86 GLN HA H N N 87 GLN HB2 H N N 88 GLN HB3 H N N 89 GLN HG2 H N N 90 GLN HG3 H N N 91 GLN HE21 H N N 92 GLN HE22 H N N 93 GLN HXT H N N 94 GLU N N N N 95 GLU CA C N S 96 GLU C C N N 97 GLU O O N N 98 GLU CB C N N 99 GLU CG C N N 100 GLU CD C N N 101 GLU OE1 O N N 102 GLU OE2 O N N 103 GLU OXT O N N 104 GLU H H N N 105 GLU H2 H N N 106 GLU HA H N N 107 GLU HB2 H N N 108 GLU HB3 H N N 109 GLU HG2 H N N 110 GLU HG3 H N N 111 GLU HE2 H N N 112 GLU HXT H N N 113 GLY N N N N 114 GLY CA C N N 115 GLY C C N N 116 GLY O O N N 117 GLY OXT O N N 118 GLY H H N N 119 GLY H2 H N N 120 GLY HA2 H N N 121 GLY HA3 H N N 122 GLY HXT H N N 123 HIS N N N N 124 HIS CA C N S 125 HIS C C N N 126 HIS O O N N 127 HIS CB C N N 128 HIS CG C Y N 129 HIS ND1 N Y N 130 HIS CD2 C Y N 131 HIS CE1 C Y N 132 HIS NE2 N Y N 133 HIS OXT O N N 134 HIS H H N N 135 HIS H2 H N N 136 HIS HA H N N 137 HIS HB2 H N N 138 HIS HB3 H N N 139 HIS HD1 H N N 140 HIS HD2 H N N 141 HIS HE1 H N N 142 HIS HE2 H N N 143 HIS HXT H N N 144 HOH O O N N 145 HOH H1 H N N 146 HOH H2 H N N 147 ILE N N N N 148 ILE CA C N S 149 ILE C C N N 150 ILE O O N N 151 ILE CB C N S 152 ILE CG1 C N N 153 ILE CG2 C N N 154 ILE CD1 C N N 155 ILE OXT O N N 156 ILE H H N N 157 ILE H2 H N N 158 ILE HA H N N 159 ILE HB H N N 160 ILE HG12 H N N 161 ILE HG13 H N N 162 ILE HG21 H N N 163 ILE HG22 H N N 164 ILE HG23 H N N 165 ILE HD11 H N N 166 ILE HD12 H N N 167 ILE HD13 H N N 168 ILE HXT H N N 169 LEU N N N N 170 LEU CA C N S 171 LEU C C N N 172 LEU O O N N 173 LEU CB C N N 174 LEU CG C N N 175 LEU CD1 C N N 176 LEU CD2 C N N 177 LEU OXT O N N 178 LEU H H N N 179 LEU H2 H N N 180 LEU HA H N N 181 LEU HB2 H N N 182 LEU HB3 H N N 183 LEU HG H N N 184 LEU HD11 H N N 185 LEU HD12 H N N 186 LEU HD13 H N N 187 LEU HD21 H N N 188 LEU HD22 H N N 189 LEU HD23 H N N 190 LEU HXT H N N 191 LYS N N N N 192 LYS CA C N S 193 LYS C C N N 194 LYS O O N N 195 LYS CB C N N 196 LYS CG C N N 197 LYS CD C N N 198 LYS CE C N N 199 LYS NZ N N N 200 LYS OXT O N N 201 LYS H H N N 202 LYS H2 H N N 203 LYS HA H N N 204 LYS HB2 H N N 205 LYS HB3 H N N 206 LYS HG2 H N N 207 LYS HG3 H N N 208 LYS HD2 H N N 209 LYS HD3 H N N 210 LYS HE2 H N N 211 LYS HE3 H N N 212 LYS HZ1 H N N 213 LYS HZ2 H N N 214 LYS HZ3 H N N 215 LYS HXT H N N 216 MET N N N N 217 MET CA C N S 218 MET C C N N 219 MET O O N N 220 MET CB C N N 221 MET CG C N N 222 MET SD S N N 223 MET CE C N N 224 MET OXT O N N 225 MET H H N N 226 MET H2 H N N 227 MET HA H N N 228 MET HB2 H N N 229 MET HB3 H N N 230 MET HG2 H N N 231 MET HG3 H N N 232 MET HE1 H N N 233 MET HE2 H N N 234 MET HE3 H N N 235 MET HXT H N N 236 MG MG MG N N 237 PHE N N N N 238 PHE CA C N S 239 PHE C C N N 240 PHE O O N N 241 PHE CB C N N 242 PHE CG C Y N 243 PHE CD1 C Y N 244 PHE CD2 C Y N 245 PHE CE1 C Y N 246 PHE CE2 C Y N 247 PHE CZ C Y N 248 PHE OXT O N N 249 PHE H H N N 250 PHE H2 H N N 251 PHE HA H N N 252 PHE HB2 H N N 253 PHE HB3 H N N 254 PHE HD1 H N N 255 PHE HD2 H N N 256 PHE HE1 H N N 257 PHE HE2 H N N 258 PHE HZ H N N 259 PHE HXT H N N 260 PRO N N N N 261 PRO CA C N S 262 PRO C C N N 263 PRO O O N N 264 PRO CB C N N 265 PRO CG C N N 266 PRO CD C N N 267 PRO OXT O N N 268 PRO H H N N 269 PRO HA H N N 270 PRO HB2 H N N 271 PRO HB3 H N N 272 PRO HG2 H N N 273 PRO HG3 H N N 274 PRO HD2 H N N 275 PRO HD3 H N N 276 PRO HXT H N N 277 SER N N N N 278 SER CA C N S 279 SER C C N N 280 SER O O N N 281 SER CB C N N 282 SER OG O N N 283 SER OXT O N N 284 SER H H N N 285 SER H2 H N N 286 SER HA H N N 287 SER HB2 H N N 288 SER HB3 H N N 289 SER HG H N N 290 SER HXT H N N 291 T1C C94 C N N 292 T1C C93 C N N 293 T1C C95 C N N 294 T1C C96 C N N 295 T1C N92 N N N 296 T1C C92 C N N 297 T1C C91 C N N 298 T1C O91 O N N 299 T1C N9 N N N 300 T1C C9 C Y N 301 T1C C8 C Y N 302 T1C C7 C Y N 303 T1C N7 N N N 304 T1C C71 C N N 305 T1C C72 C N N 306 T1C C61 C Y N 307 T1C C6 C N N 308 T1C C51 C N R 309 T1C C5 C N N 310 T1C C41 C N S 311 T1C C4 C N S 312 T1C N4 N N N 313 T1C C43 C N N 314 T1C C42 C N N 315 T1C C3 C N N 316 T1C O3 O N N 317 T1C C2 C N N 318 T1C C21 C N N 319 T1C O21 O N N 320 T1C N21 N N N 321 T1C C1 C N N 322 T1C O1 O N N 323 T1C C1C C N S 324 T1C O1C O N N 325 T1C C12 C N N 326 T1C O12 O N N 327 T1C C1B C N N 328 T1C C11 C N N 329 T1C O11 O N N 330 T1C C1A C Y N 331 T1C C10 C Y N 332 T1C O10 O N N 333 T1C H941 H N N 334 T1C H942 H N N 335 T1C H943 H N N 336 T1C H951 H N N 337 T1C H952 H N N 338 T1C H953 H N N 339 T1C H961 H N N 340 T1C H962 H N N 341 T1C H963 H N N 342 T1C H92 H N N 343 T1C H921 H N N 344 T1C H922 H N N 345 T1C H9 H N N 346 T1C H8 H N N 347 T1C H711 H N N 348 T1C H712 H N N 349 T1C H713 H N N 350 T1C H721 H N N 351 T1C H722 H N N 352 T1C H723 H N N 353 T1C H61C H N N 354 T1C H62C H N N 355 T1C H51 H N N 356 T1C H51C H N N 357 T1C H52C H N N 358 T1C H41 H N N 359 T1C H4 H N N 360 T1C H431 H N N 361 T1C H432 H N N 362 T1C H433 H N N 363 T1C H421 H N N 364 T1C H422 H N N 365 T1C H423 H N N 366 T1C H3 H N N 367 T1C H211 H N N 368 T1C H212 H N N 369 T1C H1C H N N 370 T1C H12 H N N 371 T1C H10 H N N 372 T1C H42 H N N 373 T1C H7 H N N 374 THR N N N N 375 THR CA C N S 376 THR C C N N 377 THR O O N N 378 THR CB C N R 379 THR OG1 O N N 380 THR CG2 C N N 381 THR OXT O N N 382 THR H H N N 383 THR H2 H N N 384 THR HA H N N 385 THR HB H N N 386 THR HG1 H N N 387 THR HG21 H N N 388 THR HG22 H N N 389 THR HG23 H N N 390 THR HXT H N N 391 TRP N N N N 392 TRP CA C N S 393 TRP C C N N 394 TRP O O N N 395 TRP CB C N N 396 TRP CG C Y N 397 TRP CD1 C Y N 398 TRP CD2 C Y N 399 TRP NE1 N Y N 400 TRP CE2 C Y N 401 TRP CE3 C Y N 402 TRP CZ2 C Y N 403 TRP CZ3 C Y N 404 TRP CH2 C Y N 405 TRP OXT O N N 406 TRP H H N N 407 TRP H2 H N N 408 TRP HA H N N 409 TRP HB2 H N N 410 TRP HB3 H N N 411 TRP HD1 H N N 412 TRP HE1 H N N 413 TRP HE3 H N N 414 TRP HZ2 H N N 415 TRP HZ3 H N N 416 TRP HH2 H N N 417 TRP HXT H N N 418 TYR N N N N 419 TYR CA C N S 420 TYR C C N N 421 TYR O O N N 422 TYR CB C N N 423 TYR CG C Y N 424 TYR CD1 C Y N 425 TYR CD2 C Y N 426 TYR CE1 C Y N 427 TYR CE2 C Y N 428 TYR CZ C Y N 429 TYR OH O N N 430 TYR OXT O N N 431 TYR H H N N 432 TYR H2 H N N 433 TYR HA H N N 434 TYR HB2 H N N 435 TYR HB3 H N N 436 TYR HD1 H N N 437 TYR HD2 H N N 438 TYR HE1 H N N 439 TYR HE2 H N N 440 TYR HH H N N 441 TYR HXT H N N 442 VAL N N N N 443 VAL CA C N S 444 VAL C C N N 445 VAL O O N N 446 VAL CB C N N 447 VAL CG1 C N N 448 VAL CG2 C N N 449 VAL OXT O N N 450 VAL H H N N 451 VAL H2 H N N 452 VAL HA H N N 453 VAL HB H N N 454 VAL HG11 H N N 455 VAL HG12 H N N 456 VAL HG13 H N N 457 VAL HG21 H N N 458 VAL HG22 H N N 459 VAL HG23 H N N 460 VAL HXT H N N 461 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 HIS N CA sing N N 116 HIS N H sing N N 117 HIS N H2 sing N N 118 HIS CA C sing N N 119 HIS CA CB sing N N 120 HIS CA HA sing N N 121 HIS C O doub N N 122 HIS C OXT sing N N 123 HIS CB CG sing N N 124 HIS CB HB2 sing N N 125 HIS CB HB3 sing N N 126 HIS CG ND1 sing Y N 127 HIS CG CD2 doub Y N 128 HIS ND1 CE1 doub Y N 129 HIS ND1 HD1 sing N N 130 HIS CD2 NE2 sing Y N 131 HIS CD2 HD2 sing N N 132 HIS CE1 NE2 sing Y N 133 HIS CE1 HE1 sing N N 134 HIS NE2 HE2 sing N N 135 HIS OXT HXT sing N N 136 HOH O H1 sing N N 137 HOH O H2 sing N N 138 ILE N CA sing N N 139 ILE N H sing N N 140 ILE N H2 sing N N 141 ILE CA C sing N N 142 ILE CA CB sing N N 143 ILE CA HA sing N N 144 ILE C O doub N N 145 ILE C OXT sing N N 146 ILE CB CG1 sing N N 147 ILE CB CG2 sing N N 148 ILE CB HB sing N N 149 ILE CG1 CD1 sing N N 150 ILE CG1 HG12 sing N N 151 ILE CG1 HG13 sing N N 152 ILE CG2 HG21 sing N N 153 ILE CG2 HG22 sing N N 154 ILE CG2 HG23 sing N N 155 ILE CD1 HD11 sing N N 156 ILE CD1 HD12 sing N N 157 ILE CD1 HD13 sing N N 158 ILE OXT HXT sing N N 159 LEU N CA sing N N 160 LEU N H sing N N 161 LEU N H2 sing N N 162 LEU CA C sing N N 163 LEU CA CB sing N N 164 LEU CA HA sing N N 165 LEU C O doub N N 166 LEU C OXT sing N N 167 LEU CB CG sing N N 168 LEU CB HB2 sing N N 169 LEU CB HB3 sing N N 170 LEU CG CD1 sing N N 171 LEU CG CD2 sing N N 172 LEU CG HG sing N N 173 LEU CD1 HD11 sing N N 174 LEU CD1 HD12 sing N N 175 LEU CD1 HD13 sing N N 176 LEU CD2 HD21 sing N N 177 LEU CD2 HD22 sing N N 178 LEU CD2 HD23 sing N N 179 LEU OXT HXT sing N N 180 LYS N CA sing N N 181 LYS N H sing N N 182 LYS N H2 sing N N 183 LYS CA C sing N N 184 LYS CA CB sing N N 185 LYS CA HA sing N N 186 LYS C O doub N N 187 LYS C OXT sing N N 188 LYS CB CG sing N N 189 LYS CB HB2 sing N N 190 LYS CB HB3 sing N N 191 LYS CG CD sing N N 192 LYS CG HG2 sing N N 193 LYS CG HG3 sing N N 194 LYS CD CE sing N N 195 LYS CD HD2 sing N N 196 LYS CD HD3 sing N N 197 LYS CE NZ sing N N 198 LYS CE HE2 sing N N 199 LYS CE HE3 sing N N 200 LYS NZ HZ1 sing N N 201 LYS NZ HZ2 sing N N 202 LYS NZ HZ3 sing N N 203 LYS OXT HXT sing N N 204 MET N CA sing N N 205 MET N H sing N N 206 MET N H2 sing N N 207 MET CA C sing N N 208 MET CA CB sing N N 209 MET CA HA sing N N 210 MET C O doub N N 211 MET C OXT sing N N 212 MET CB CG sing N N 213 MET CB HB2 sing N N 214 MET CB HB3 sing N N 215 MET CG SD sing N N 216 MET CG HG2 sing N N 217 MET CG HG3 sing N N 218 MET SD CE sing N N 219 MET CE HE1 sing N N 220 MET CE HE2 sing N N 221 MET CE HE3 sing N N 222 MET OXT HXT sing N N 223 PHE N CA sing N N 224 PHE N H sing N N 225 PHE N H2 sing N N 226 PHE CA C sing N N 227 PHE CA CB sing N N 228 PHE CA HA sing N N 229 PHE C O doub N N 230 PHE C OXT sing N N 231 PHE CB CG sing N N 232 PHE CB HB2 sing N N 233 PHE CB HB3 sing N N 234 PHE CG CD1 doub Y N 235 PHE CG CD2 sing Y N 236 PHE CD1 CE1 sing Y N 237 PHE CD1 HD1 sing N N 238 PHE CD2 CE2 doub Y N 239 PHE CD2 HD2 sing N N 240 PHE CE1 CZ doub Y N 241 PHE CE1 HE1 sing N N 242 PHE CE2 CZ sing Y N 243 PHE CE2 HE2 sing N N 244 PHE CZ HZ sing N N 245 PHE OXT HXT sing N N 246 PRO N CA sing N N 247 PRO N CD sing N N 248 PRO N H sing N N 249 PRO CA C sing N N 250 PRO CA CB sing N N 251 PRO CA HA sing N N 252 PRO C O doub N N 253 PRO C OXT sing N N 254 PRO CB CG sing N N 255 PRO CB HB2 sing N N 256 PRO CB HB3 sing N N 257 PRO CG CD sing N N 258 PRO CG HG2 sing N N 259 PRO CG HG3 sing N N 260 PRO CD HD2 sing N N 261 PRO CD HD3 sing N N 262 PRO OXT HXT sing N N 263 SER N CA sing N N 264 SER N H sing N N 265 SER N H2 sing N N 266 SER CA C sing N N 267 SER CA CB sing N N 268 SER CA HA sing N N 269 SER C O doub N N 270 SER C OXT sing N N 271 SER CB OG sing N N 272 SER CB HB2 sing N N 273 SER CB HB3 sing N N 274 SER OG HG sing N N 275 SER OXT HXT sing N N 276 T1C C94 C93 sing N N 277 T1C C93 C95 sing N N 278 T1C C93 C96 sing N N 279 T1C C93 N92 sing N N 280 T1C N92 C92 sing N N 281 T1C C92 C91 sing N N 282 T1C C91 O91 doub N N 283 T1C C91 N9 sing N N 284 T1C N9 C9 sing N N 285 T1C C9 C8 doub Y N 286 T1C C9 C10 sing Y N 287 T1C C8 C7 sing Y N 288 T1C C7 N7 sing N N 289 T1C C7 C61 doub Y N 290 T1C C6 C61 sing N N 291 T1C N7 C71 sing N N 292 T1C N7 C72 sing N N 293 T1C C61 C1A sing Y N 294 T1C C6 C51 sing N N 295 T1C C51 C5 sing N N 296 T1C C51 C1B sing N N 297 T1C C5 C41 sing N N 298 T1C C41 C4 sing N N 299 T1C C41 C1C sing N N 300 T1C C4 N4 sing N N 301 T1C C4 C3 sing N N 302 T1C N4 C43 sing N N 303 T1C N4 C42 sing N N 304 T1C C3 O3 sing N N 305 T1C C3 C2 doub N N 306 T1C C2 C21 sing N N 307 T1C C2 C1 sing N N 308 T1C C21 O21 doub N N 309 T1C C21 N21 sing N N 310 T1C C1 O1 doub N N 311 T1C C1 C1C sing N N 312 T1C C1C O1C sing N N 313 T1C C1C C12 sing N N 314 T1C C12 O12 sing N N 315 T1C C12 C1B doub N N 316 T1C C1B C11 sing N N 317 T1C C11 O11 doub N N 318 T1C C11 C1A sing N N 319 T1C C1A C10 doub Y N 320 T1C C10 O10 sing N N 321 T1C C94 H941 sing N N 322 T1C C94 H942 sing N N 323 T1C C94 H943 sing N N 324 T1C C95 H951 sing N N 325 T1C C95 H952 sing N N 326 T1C C95 H953 sing N N 327 T1C C96 H961 sing N N 328 T1C C96 H962 sing N N 329 T1C C96 H963 sing N N 330 T1C N92 H92 sing N N 331 T1C C92 H921 sing N N 332 T1C C92 H922 sing N N 333 T1C N9 H9 sing N N 334 T1C C8 H8 sing N N 335 T1C C71 H711 sing N N 336 T1C C71 H712 sing N N 337 T1C C71 H713 sing N N 338 T1C C72 H721 sing N N 339 T1C C72 H722 sing N N 340 T1C C72 H723 sing N N 341 T1C C6 H61C sing N N 342 T1C C6 H62C sing N N 343 T1C C51 H51 sing N N 344 T1C C5 H51C sing N N 345 T1C C5 H52C sing N N 346 T1C C41 H41 sing N N 347 T1C C4 H4 sing N N 348 T1C C43 H431 sing N N 349 T1C C43 H432 sing N N 350 T1C C43 H433 sing N N 351 T1C C42 H421 sing N N 352 T1C C42 H422 sing N N 353 T1C C42 H423 sing N N 354 T1C O3 H3 sing N N 355 T1C N21 H211 sing N N 356 T1C N21 H212 sing N N 357 T1C O1C H1C sing N N 358 T1C O12 H12 sing N N 359 T1C O10 H10 sing N N 360 T1C N4 H42 sing N N 361 T1C N7 H7 sing N N 362 THR N CA sing N N 363 THR N H sing N N 364 THR N H2 sing N N 365 THR CA C sing N N 366 THR CA CB sing N N 367 THR CA HA sing N N 368 THR C O doub N N 369 THR C OXT sing N N 370 THR CB OG1 sing N N 371 THR CB CG2 sing N N 372 THR CB HB sing N N 373 THR OG1 HG1 sing N N 374 THR CG2 HG21 sing N N 375 THR CG2 HG22 sing N N 376 THR CG2 HG23 sing N N 377 THR OXT HXT sing N N 378 TRP N CA sing N N 379 TRP N H sing N N 380 TRP N H2 sing N N 381 TRP CA C sing N N 382 TRP CA CB sing N N 383 TRP CA HA sing N N 384 TRP C O doub N N 385 TRP C OXT sing N N 386 TRP CB CG sing N N 387 TRP CB HB2 sing N N 388 TRP CB HB3 sing N N 389 TRP CG CD1 doub Y N 390 TRP CG CD2 sing Y N 391 TRP CD1 NE1 sing Y N 392 TRP CD1 HD1 sing N N 393 TRP CD2 CE2 doub Y N 394 TRP CD2 CE3 sing Y N 395 TRP NE1 CE2 sing Y N 396 TRP NE1 HE1 sing N N 397 TRP CE2 CZ2 sing Y N 398 TRP CE3 CZ3 doub Y N 399 TRP CE3 HE3 sing N N 400 TRP CZ2 CH2 doub Y N 401 TRP CZ2 HZ2 sing N N 402 TRP CZ3 CH2 sing Y N 403 TRP CZ3 HZ3 sing N N 404 TRP CH2 HH2 sing N N 405 TRP OXT HXT sing N N 406 TYR N CA sing N N 407 TYR N H sing N N 408 TYR N H2 sing N N 409 TYR CA C sing N N 410 TYR CA CB sing N N 411 TYR CA HA sing N N 412 TYR C O doub N N 413 TYR C OXT sing N N 414 TYR CB CG sing N N 415 TYR CB HB2 sing N N 416 TYR CB HB3 sing N N 417 TYR CG CD1 doub Y N 418 TYR CG CD2 sing Y N 419 TYR CD1 CE1 sing Y N 420 TYR CD1 HD1 sing N N 421 TYR CD2 CE2 doub Y N 422 TYR CD2 HD2 sing N N 423 TYR CE1 CZ doub Y N 424 TYR CE1 HE1 sing N N 425 TYR CE2 CZ sing Y N 426 TYR CE2 HE2 sing N N 427 TYR CZ OH sing N N 428 TYR OH HH sing N N 429 TYR OXT HXT sing N N 430 VAL N CA sing N N 431 VAL N H sing N N 432 VAL N H2 sing N N 433 VAL CA C sing N N 434 VAL CA CB sing N N 435 VAL CA HA sing N N 436 VAL C O doub N N 437 VAL C OXT sing N N 438 VAL CB CG1 sing N N 439 VAL CB CG2 sing N N 440 VAL CB HB sing N N 441 VAL CG1 HG11 sing N N 442 VAL CG1 HG12 sing N N 443 VAL CG1 HG13 sing N N 444 VAL CG2 HG21 sing N N 445 VAL CG2 HG22 sing N N 446 VAL CG2 HG23 sing N N 447 VAL OXT HXT sing N N 448 # loop_ _pdbx_entity_instance_feature.ordinal _pdbx_entity_instance_feature.comp_id _pdbx_entity_instance_feature.asym_id _pdbx_entity_instance_feature.seq_num _pdbx_entity_instance_feature.auth_comp_id _pdbx_entity_instance_feature.auth_asym_id _pdbx_entity_instance_feature.auth_seq_num _pdbx_entity_instance_feature.feature_type _pdbx_entity_instance_feature.details 1 T1C ? ? T1C ? ? 'SUBJECT OF INVESTIGATION' ? 2 MG ? ? MG ? ? 'SUBJECT OF INVESTIGATION' ? # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2XPV _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 6YR1 _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.014607 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014607 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.005542 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.pdbx_scat_Z _atom_type.pdbx_N_electrons _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c C 6 6 2.310 20.844 1.020 10.208 1.589 0.569 0.865 51.651 0.216 CL 17 17 11.460 0.010 7.196 1.166 6.255 18.519 1.645 47.778 -9.212 MG 12 12 5.427 2.828 2.176 79.261 1.228 0.381 2.310 7.194 1.023 N 7 7 12.222 0.006 3.135 9.893 2.014 28.997 1.167 0.583 -11.538 O 8 8 3.049 13.277 2.287 5.701 1.546 0.324 0.867 32.909 0.251 S 16 16 6.905 1.468 5.203 22.215 1.438 0.254 1.586 56.172 1.184 # loop_