HEADER STRUCTURAL PROTEIN 20-APR-20 6YRR TITLE HEIMDALLARCHAEOTA PROFILIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROFILIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CANDIDATUS HEIMDALLARCHAEOTA ARCHAEON LC_3; SOURCE 3 ORGANISM_TAXID: 1841598; SOURCE 4 GENE: HEIMC3_27980; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS EUKARYOGENESIS, PROFILIN, HEIMDALLARCHAEOTA, STRUCTURAL PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR C.CELESTINE REVDAT 2 14-JUN-23 6YRR 1 REMARK REVDAT 1 03-NOV-21 6YRR 0 JRNL AUTH C.CELESTINE JRNL TITL HEIMDALLARCHAEA ENCODES PROFILIN WITH EUKARYOTIC-LIKE ACTIN JRNL TITL 2 REGULATION AND POLYPROLINE BINDING JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER A. T. ET.AL. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6YRR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 20-APR-20. REMARK 100 THE DEPOSITION ID IS D_1292108159. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 308 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : 150 REMARK 210 PRESSURE : 1 BAR REMARK 210 SAMPLE CONTENTS : 0.5 MM [U-99% 13C; U-99% 15N] REMARK 210 PROFILIN, 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : TROSY; HNCACB; HNCOCACB; 3D REMARK 210 NOESY-HSQC REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 700 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE III REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 0 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9510 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 17 PRO A 47 C - N - CA ANGL. DEV. = 9.9 DEGREES REMARK 500 19 PRO A 47 C - N - CA ANGL. DEV. = 9.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 LYS A 11 30.82 -72.56 REMARK 500 1 SER A 27 85.79 72.48 REMARK 500 1 ASP A 28 -56.20 -166.97 REMARK 500 1 TRP A 53 138.58 -170.17 REMARK 500 1 ASN A 58 76.92 69.88 REMARK 500 1 VAL A 93 30.77 -96.54 REMARK 500 1 SER A 94 126.57 77.00 REMARK 500 1 MET A 100 -26.43 -39.61 REMARK 500 1 PRO A 112 12.87 -64.76 REMARK 500 1 LEU A 134 41.61 -157.00 REMARK 500 2 LYS A 14 -67.57 -103.35 REMARK 500 2 ASN A 15 75.39 -117.53 REMARK 500 2 ILE A 19 52.44 -102.75 REMARK 500 2 TYR A 38 57.16 80.51 REMARK 500 2 ASN A 55 71.06 -106.46 REMARK 500 2 ASN A 56 62.85 -151.04 REMARK 500 2 ASN A 58 35.56 75.53 REMARK 500 2 PHE A 87 -61.05 -99.68 REMARK 500 2 SER A 94 132.01 -179.03 REMARK 500 2 ASN A 99 87.93 -69.18 REMARK 500 2 MET A 100 -78.24 54.95 REMARK 500 2 ALA A 101 -68.83 -104.98 REMARK 500 2 TYR A 115 102.08 -58.85 REMARK 500 2 PRO A 133 101.28 -47.21 REMARK 500 2 ILE A 140 -64.61 -106.57 REMARK 500 3 ASP A 29 -72.90 -44.45 REMARK 500 3 PRO A 47 -5.91 -56.33 REMARK 500 3 ASN A 56 68.84 -116.29 REMARK 500 3 ASN A 58 75.72 74.70 REMARK 500 3 ASN A 99 73.88 -68.31 REMARK 500 3 MET A 100 -75.21 66.97 REMARK 500 3 ALA A 101 -5.79 -147.25 REMARK 500 3 PRO A 133 91.29 -37.73 REMARK 500 3 ILE A 136 -53.17 167.16 REMARK 500 4 GLU A 23 86.64 42.94 REMARK 500 4 SER A 25 106.83 -51.84 REMARK 500 4 SER A 27 90.38 -54.45 REMARK 500 4 ASP A 28 -52.11 -166.64 REMARK 500 4 GLN A 37 55.22 77.83 REMARK 500 4 ASN A 58 52.23 81.59 REMARK 500 4 PHE A 87 -61.90 -90.27 REMARK 500 4 VAL A 93 -67.16 -99.93 REMARK 500 4 MET A 100 73.83 -64.14 REMARK 500 4 ALA A 101 -50.68 -171.27 REMARK 500 4 PRO A 112 -59.75 -17.85 REMARK 500 4 TYR A 115 95.96 -55.96 REMARK 500 4 PRO A 132 -164.01 -70.62 REMARK 500 4 PRO A 133 2.38 -56.20 REMARK 500 5 SER A 27 -66.62 69.25 REMARK 500 5 ASN A 55 58.98 -117.93 REMARK 500 REMARK 500 THIS ENTRY HAS 260 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 50190 RELATED DB: BMRB DBREF1 6YRR A 1 148 UNP A0A1Q9NL85_9ARCH DBREF2 6YRR A A0A1Q9NL85 1 148 SEQRES 1 A 148 MET LYS ASP GLY PHE ILE LEU LYS LYS LYS LYS ILE PRO SEQRES 2 A 148 LYS ASN ILE PHE ARG ILE GLY ASN LYS GLU MET SER TYR SEQRES 3 A 148 SER ASP ASP LEU ASN SER LEU ILE GLN SER GLN TYR VAL SEQRES 4 A 148 SER TYR VAL VAL ILE LEU ASP PRO ASN GLY ALA ILE TYR SEQRES 5 A 148 TRP THR ASN ASN GLU ASN TRP GLN VAL ASN GLY SER GLU SEQRES 6 A 148 VAL LEU ARG GLN TRP MET GLY SER ALA PRO SER ILE THR SEQRES 7 A 148 VAL ALA GLY THR LYS PHE SER SER PHE ARG ASN GLU PRO SEQRES 8 A 148 GLY VAL SER PHE VAL GLY ARG ASN MET ALA GLY GLY GLY SEQRES 9 A 148 LEU ILE ILE LEU GLN LYS ALA PRO ASN GLY TYR VAL PHE SEQRES 10 A 148 LEU SER TRP THR SER HIS GLU PHE LEU THR THR SER GLY SEQRES 11 A 148 LEU PRO PRO LEU ASN ILE HIS ALA GLU ILE ALA MET MET SEQRES 12 A 148 ALA ALA LYS PHE GLN HELIX 1 AA1 LEU A 30 GLN A 35 1 6 HELIX 2 AA2 ASN A 62 GLN A 69 1 8 HELIX 3 AA3 TRP A 70 SER A 73 5 4 HELIX 4 AA4 HIS A 137 MET A 142 1 6 HELIX 5 AA5 MET A 142 PHE A 147 1 6 SHEET 1 AA1 7 ILE A 51 TRP A 53 0 SHEET 2 AA1 7 VAL A 39 LEU A 45 -1 N ILE A 44 O TYR A 52 SHEET 3 AA1 7 VAL A 116 THR A 121 -1 O LEU A 118 N VAL A 43 SHEET 4 AA1 7 LEU A 105 LYS A 110 -1 N ILE A 107 O SER A 119 SHEET 5 AA1 7 PHE A 95 ASN A 99 -1 N GLY A 97 O ILE A 106 SHEET 6 AA1 7 THR A 82 ARG A 88 -1 N PHE A 87 O VAL A 96 SHEET 7 AA1 7 SER A 76 VAL A 79 -1 N ILE A 77 O PHE A 84 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1