data_6YT8 # _entry.id 6YT8 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.341 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 6YT8 WWPDB D_1292108246 # _pdbx_database_PDB_obs_spr.id OBSLTE _pdbx_database_PDB_obs_spr.date 2021-01-13 _pdbx_database_PDB_obs_spr.pdb_id 7B83 _pdbx_database_PDB_obs_spr.replace_pdb_id 6YT8 _pdbx_database_PDB_obs_spr.details ? # _pdbx_database_related.db_name PDB _pdbx_database_related.details . _pdbx_database_related.db_id 6YNQ _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code OBS _pdbx_database_status.status_code_sf OBS _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6YT8 _pdbx_database_status.recvd_initial_deposition_date 2020-04-24 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Guenther, S.' 1 ? 'Reinke, P.' 2 ? 'Oberthuer, D.' 3 ? 'Yefanov, O.' 4 ? 'Gelisio, L.' 5 ? 'Ginn, H.' 6 ? 'Lieske, J.' 7 ? 'Domaracky, M.' 8 ? 'Brehm, W.' 9 ? 'Rahmani Mashour, A.' 10 ? 'White, T.A.' 11 ? 'Knoska, J.' 12 ? 'Pena Esperanza, G.' 13 ? 'Koua, F.' 14 ? 'Tolstikova, A.' 15 ? 'Groessler, M.' 16 ? 'Fischer, P.' 17 ? 'Hennicke, V.' 18 ? 'Fleckenstein, H.' 19 ? 'Trost, F.' 20 ? 'Galchenkova, M.' 21 ? 'Gevorkov, Y.' 22 ? 'Li, C.' 23 ? 'Awel, S.' 24 ? 'Paulraj, L.X.' 25 ? 'Ullah, N.' 26 ? 'Falke, S.' 27 ? 'Alves Franca, B.' 28 ? 'Schwinzer, M.' 29 ? 'Brognaro, H.' 30 ? 'Werner, N.' 31 ? 'Perbandt, M.' 32 ? 'Tidow, H.' 33 ? 'Seychell, B.' 34 ? 'Beck, T.' 35 ? 'Meier, S.' 36 ? 'Doyle, J.J.' 37 ? 'Giseler, H.' 38 ? 'Melo, D.' 39 ? 'Dunkel, I.' 40 ? 'Lane, T.J.' 41 ? 'Peck, A.' 42 ? 'Saouane, S.' 43 ? 'Hakanpaeae, J.' 44 ? 'Meyer, J.' 45 ? 'Noei, H.' 46 ? 'Gribbon, P.' 47 ? 'Ellinger, B.' 48 ? 'Kuzikov, M.' 49 ? 'Wolf, M.' 50 ? 'Zhang, L.' 51 ? 'Ehrt, C.' 52 ? 'Pletzer-Zelgert, J.' 53 ? 'Wollenhaupt, J.' 54 ? 'Feiler, C.' 55 ? 'Weiss, M.' 56 ? 'Schulz, E.C.' 57 ? 'Mehrabi, P.' 58 ? 'Norton-Baker, B.' 59 ? 'Schmidt, C.' 60 ? 'Lorenzen, K.' 61 ? 'Schubert, R.' 62 ? 'Han, H.' 63 ? 'Chari, A.' 64 ? 'Fernandez Garcia, Y.' 65 ? 'Turk, D.' 66 ? 'Hilgenfeld, R.' 67 ? 'Rarey, M.' 68 ? 'Zaliani, A.' 69 ? 'Chapman, H.N.' 70 ? 'Pearson, A.' 71 ? 'Betzel, C.' 72 ? 'Meents, A.' 73 ? # loop_ _citation.abstract _citation.abstract_id_CAS _citation.book_id_ISBN _citation.book_publisher _citation.book_publisher_city _citation.book_title _citation.coordinate_linkage _citation.country _citation.database_id_Medline _citation.details _citation.id _citation.journal_abbrev _citation.journal_id_ASTM _citation.journal_id_CSD _citation.journal_id_ISSN _citation.journal_full _citation.journal_issue _citation.journal_volume _citation.language _citation.page_first _citation.page_last _citation.title _citation.year _citation.database_id_CSD _citation.pdbx_database_id_DOI _citation.pdbx_database_id_PubMed _citation.unpublished_flag ? ? ? ? ? ? ? US ? ? primary Science SCIEAS 0038 1095-9203 ? ? ? ? ? ? 'X-ray screening identifies active site and allosteric inhibitors of SARS-CoV-2 main protease.' 2021 ? 10.1126/science.abf7945 33811162 ? ? ? ? ? ? ? ? US ? ? 1 Biorxiv ? ? ? ? ? ? ? ? ? 'Inhibition of SARS-CoV-2 main protease by allosteric drug-binding' 2020 ? 10.1101/2020.11.12.378422 ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Gunther, S.' 1 ? primary 'Reinke, P.Y.A.' 2 ? primary 'Fernandez-Garcia, Y.' 3 ? primary 'Lieske, J.' 4 ? primary 'Lane, T.J.' 5 ? primary 'Ginn, H.M.' 6 ? primary 'Koua, F.H.M.' 7 ? primary 'Ehrt, C.' 8 ? primary 'Ewert, W.' 9 ? primary 'Oberthuer, D.' 10 ? primary 'Yefanov, O.' 11 ? primary 'Meier, S.' 12 ? primary 'Lorenzen, K.' 13 ? primary 'Krichel, B.' 14 ? primary 'Kopicki, J.D.' 15 ? primary 'Gelisio, L.' 16 ? primary 'Brehm, W.' 17 ? primary 'Dunkel, I.' 18 ? primary 'Seychell, B.' 19 ? primary 'Gieseler, H.' 20 ? primary 'Norton-Baker, B.' 21 ? primary 'Escudero-Perez, B.' 22 ? primary 'Domaracky, M.' 23 ? primary 'Saouane, S.' 24 ? primary 'Tolstikova, A.' 25 ? primary 'White, T.A.' 26 ? primary 'Hanle, A.' 27 ? primary 'Groessler, M.' 28 ? primary 'Fleckenstein, H.' 29 ? primary 'Trost, F.' 30 ? primary 'Galchenkova, M.' 31 ? primary 'Gevorkov, Y.' 32 ? primary 'Li, C.' 33 ? primary 'Awel, S.' 34 ? primary 'Peck, A.' 35 ? primary 'Barthelmess, M.' 36 ? primary 'Schluenzen, F.' 37 ? primary 'Lourdu Xavier, P.' 38 ? primary 'Werner, N.' 39 ? primary 'Andaleeb, H.' 40 ? primary 'Ullah, N.' 41 ? primary 'Falke, S.' 42 ? primary 'Srinivasan, V.' 43 ? primary 'Franca, B.A.' 44 ? primary 'Schwinzer, M.' 45 ? primary 'Brognaro, H.' 46 ? primary 'Rogers, C.' 47 ? primary 'Melo, D.' 48 ? primary 'Zaitseva-Doyle, J.J.' 49 ? primary 'Knoska, J.' 50 ? primary 'Pena-Murillo, G.E.' 51 ? primary 'Mashhour, A.R.' 52 ? primary 'Hennicke, V.' 53 ? primary 'Fischer, P.' 54 ? primary 'Hakanpaa, J.' 55 ? primary 'Meyer, J.' 56 ? primary 'Gribbon, P.' 57 ? primary 'Ellinger, B.' 58 ? primary 'Kuzikov, M.' 59 ? primary 'Wolf, M.' 60 ? primary 'Beccari, A.R.' 61 ? primary 'Bourenkov, G.' 62 ? primary 'von Stetten, D.' 63 ? primary 'Pompidor, G.' 64 ? primary 'Bento, I.' 65 ? primary 'Panneerselvam, S.' 66 ? primary 'Karpics, I.' 67 ? primary 'Schneider, T.R.' 68 ? primary 'Garcia-Alai, M.M.' 69 ? primary 'Niebling, S.' 70 ? primary 'Gunther, C.' 71 ? primary 'Schmidt, C.' 72 ? primary 'Schubert, R.' 73 ? primary 'Han, H.' 74 ? primary 'Boger, J.' 75 ? primary 'Monteiro, D.C.F.' 76 ? primary 'Zhang, L.' 77 ? primary 'Sun, X.' 78 ? primary 'Pletzer-Zelgert, J.' 79 ? primary 'Wollenhaupt, J.' 80 ? primary 'Feiler, C.G.' 81 ? primary 'Weiss, M.S.' 82 ? primary 'Schulz, E.C.' 83 ? primary 'Mehrabi, P.' 84 ? primary 'Karnicar, K.' 85 ? primary 'Usenik, A.' 86 ? primary 'Loboda, J.' 87 ? primary 'Tidow, H.' 88 ? primary 'Chari, A.' 89 ? primary 'Hilgenfeld, R.' 90 ? primary 'Uetrecht, C.' 91 ? primary 'Cox, R.' 92 ? primary 'Zaliani, A.' 93 ? primary 'Beck, T.' 94 ? primary 'Rarey, M.' 95 ? primary 'Gunther, S.' 96 ? primary 'Turk, D.' 97 ? primary 'Hinrichs, W.' 98 ? primary 'Chapman, H.N.' 99 ? primary 'Pearson, A.R.' 100 ? primary 'Betzel, C.' 101 ? primary 'Meents, A.' 102 ? 1 'Guenther, S.' 103 0000-0002-7329-6653 1 'Reinke, P.Y.A.,' 104 0000-0002-7354-0839 1 'Fernandez-Garcia, Y.,' 105 0000-0002-9592-2141 1 'Lieske, J.,' 106 ? 1 'Lane, T.J.,' 107 ? 1 'Ginn, H.M.,' 108 ? 1 'Koua, F.H.M.,' 109 ? 1 'Ehrt, C.,' 110 ? 1 'Ewert, W.,' 111 ? 1 'Oberthuer, D.,' 112 ? 1 'Yefanov, O.,' 113 ? 1 'Meier, S.,' 114 ? 1 'Lorenzen, K.,' 115 ? 1 'Krichel, B.,' 116 ? 1 'Kopicki, J.D.,' 117 0000-0001-9806-5352 1 'Gelisio, L.,' 118 ? 1 'Brehm, W.,' 119 ? 1 'Dunkel , I.,' 120 ? 1 'Seychell , B.,' 121 ? 1 'Gieseler , H.,' 122 ? 1 'Norton-Baker , B.,' 123 ? 1 'Escudero-Perez, B.,' 124 ? 1 'Domaracky , M.,' 125 ? 1 'Saouane, S.,' 126 ? 1 'Tolstikova , A.,' 127 ? 1 'White, T.A.,' 128 ? 1 'Hanle, A.,' 129 ? 1 'Groessler , M.,' 130 ? 1 'Fleckenstein , H.,' 131 ? 1 'Trost , F.,' 132 ? 1 'Galchenkova , M.,' 133 ? 1 'Gevorkov , Y.,' 134 ? 1 'Li , C.,' 135 ? 1 'Awel , S.,' 136 ? 1 'Peck, A.' 137 ? 1 'Barthelmess , M.,' 138 ? 1 'Schluenzen , F.,' 139 ? 1 'Paulraj , L.X.,' 140 ? 1 'Werner , N.,' 141 ? 1 'Andaleeb , H.,' 142 ? 1 'Ullah , N.,' 143 ? 1 'Falke , S.,' 144 ? 1 'Srinivasan, V.,' 145 ? 1 'Franca , B.,' 146 ? 1 'Schwinzer , M.,' 147 ? 1 'Brognaro , H.,' 148 ? 1 'Rogers , C.,' 149 ? 1 'Melo , D.,' 150 ? 1 'Doyle , J.J.,' 151 ? 1 'Knoska , J.,' 152 ? 1 'Pena Murillo, G.E.,' 153 ? 1 'Rahmani Mashhour, A.,' 154 ? 1 'Guicking , F.,' 155 ? 1 'Hennicke , V.,' 156 ? 1 'Fischer , P.,' 157 ? 1 'Hakanpaeae , J.,' 158 ? 1 'Meyer , J.,' 159 ? 1 'Gribbon , P.,' 160 ? 1 'Ellinger , B.,' 161 ? 1 'Kuzikov , M.,' 162 ? 1 'Wolf , M.,' 163 ? 1 'Burenkov, G.,' 164 ? 1 'von Stetten, D.,' 165 ? 1 'Pompidor, G.,' 166 ? 1 'Bento, I.,' 167 ? 1 'Panneerselvam, S.,' 168 ? 1 'Karpics, I.,' 169 ? 1 'Schneider , T.R.,' 170 ? 1 'Garcia Alai, M.,' 171 ? 1 'Niebling, S.,' 172 ? 1 'Guenther , C.,' 173 ? 1 'Schmidt , C.,' 174 ? 1 'Schubert , R.,' 175 ? 1 'Han , H.,' 176 ? 1 'Boger, J.,' 177 ? 1 'Monteiro , D.,' 178 ? 1 'Zhang, L.,' 179 ? 1 'Sun, X.,' 180 ? 1 'Pletzer-Zelgert , J.,' 181 ? 1 'Wollenhaupt , J.,' 182 ? 1 'Feiler , C.,' 183 ? 1 'Weiss , M.,' 184 ? 1 'Schulz , E.C.,' 185 ? 1 'Mehrabi , P.,' 186 ? 1 'Karnicar , K.,' 187 ? 1 'Usenik, A.,' 188 ? 1 'Loboda , J.,' 189 ? 1 'Tidow , H.,' 190 ? 1 'Chari , A.,' 191 ? 1 'Hilgenfeld , R.,' 192 0000-0001-8850-2977 1 'Uetrecht , C.,' 193 0000-0002-1991-7922 1 'Cox , R.,' 194 ? 1 'Zaliani , A.,' 195 ? 1 'Beck , T.,' 196 ? 1 'Rarey , M.,' 197 ? 1 'Guenther , S.,' 198 ? 1 'Turk , D.,' 199 0000-0003-0205-6609 1 'Hinrichs , W.,' 200 0000-0002-0435-4565 1 'Chapman , H.N.,' 201 ? 1 'Pearson , A.,' 202 ? 1 'Betzel , C.,' 203 ? 1 'Meents , A.' 204 0000-0001-6078-4095 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 103.034 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 6YT8 _cell.details ? _cell.formula_units_Z ? _cell.length_a 113.659 _cell.length_a_esd ? _cell.length_b 53.438 _cell.length_b_esd ? _cell.length_c 44.446 _cell.length_c_esd ? _cell.volume 262997.162 _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6YT8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall 'C 2y' _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Replicase polyprotein 1ab' 33825.547 1 3.4.19.12,3.4.22.-,3.4.22.69,2.7.7.48,3.6.4.12,3.6.4.13,3.1.13.-,3.1.-.-,2.1.1.- ? ? ? 2 non-polymer syn '9-oxa-7-thia-1-azonia-8$l^{2}-zincabicyclo[4.3.0]nona-1,3,5-triene' 191.565 1 ? ? ? ? 3 non-polymer syn IMIDAZOLE 69.085 1 ? ? ? ? 4 non-polymer syn 'DIMETHYL SULFOXIDE' 78.133 1 ? ? ? ? 5 non-polymer syn 'DI(HYDROXYETHYL)ETHER' 106.120 2 ? ? ? ? 6 non-polymer syn 'CHLORIDE ION' 35.453 1 ? ? ? ? 7 water nat water 18.015 164 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'pp1ab,ORF1ab polyprotein,SARS-CoV-2 main protease' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGH SMQNCVLKLKVDTANPKTPKYKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFC YMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTITVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYE PLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQCSGVTFQ ; _entity_poly.pdbx_seq_one_letter_code_can ;SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGH SMQNCVLKLKVDTANPKTPKYKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFC YMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTITVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYE PLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQCSGVTFQ ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 GLY n 1 3 PHE n 1 4 ARG n 1 5 LYS n 1 6 MET n 1 7 ALA n 1 8 PHE n 1 9 PRO n 1 10 SER n 1 11 GLY n 1 12 LYS n 1 13 VAL n 1 14 GLU n 1 15 GLY n 1 16 CYS n 1 17 MET n 1 18 VAL n 1 19 GLN n 1 20 VAL n 1 21 THR n 1 22 CYS n 1 23 GLY n 1 24 THR n 1 25 THR n 1 26 THR n 1 27 LEU n 1 28 ASN n 1 29 GLY n 1 30 LEU n 1 31 TRP n 1 32 LEU n 1 33 ASP n 1 34 ASP n 1 35 VAL n 1 36 VAL n 1 37 TYR n 1 38 CYS n 1 39 PRO n 1 40 ARG n 1 41 HIS n 1 42 VAL n 1 43 ILE n 1 44 CYS n 1 45 THR n 1 46 SER n 1 47 GLU n 1 48 ASP n 1 49 MET n 1 50 LEU n 1 51 ASN n 1 52 PRO n 1 53 ASN n 1 54 TYR n 1 55 GLU n 1 56 ASP n 1 57 LEU n 1 58 LEU n 1 59 ILE n 1 60 ARG n 1 61 LYS n 1 62 SER n 1 63 ASN n 1 64 HIS n 1 65 ASN n 1 66 PHE n 1 67 LEU n 1 68 VAL n 1 69 GLN n 1 70 ALA n 1 71 GLY n 1 72 ASN n 1 73 VAL n 1 74 GLN n 1 75 LEU n 1 76 ARG n 1 77 VAL n 1 78 ILE n 1 79 GLY n 1 80 HIS n 1 81 SER n 1 82 MET n 1 83 GLN n 1 84 ASN n 1 85 CYS n 1 86 VAL n 1 87 LEU n 1 88 LYS n 1 89 LEU n 1 90 LYS n 1 91 VAL n 1 92 ASP n 1 93 THR n 1 94 ALA n 1 95 ASN n 1 96 PRO n 1 97 LYS n 1 98 THR n 1 99 PRO n 1 100 LYS n 1 101 TYR n 1 102 LYS n 1 103 PHE n 1 104 VAL n 1 105 ARG n 1 106 ILE n 1 107 GLN n 1 108 PRO n 1 109 GLY n 1 110 GLN n 1 111 THR n 1 112 PHE n 1 113 SER n 1 114 VAL n 1 115 LEU n 1 116 ALA n 1 117 CYS n 1 118 TYR n 1 119 ASN n 1 120 GLY n 1 121 SER n 1 122 PRO n 1 123 SER n 1 124 GLY n 1 125 VAL n 1 126 TYR n 1 127 GLN n 1 128 CYS n 1 129 ALA n 1 130 MET n 1 131 ARG n 1 132 PRO n 1 133 ASN n 1 134 PHE n 1 135 THR n 1 136 ILE n 1 137 LYS n 1 138 GLY n 1 139 SER n 1 140 PHE n 1 141 LEU n 1 142 ASN n 1 143 GLY n 1 144 SER n 1 145 CYS n 1 146 GLY n 1 147 SER n 1 148 VAL n 1 149 GLY n 1 150 PHE n 1 151 ASN n 1 152 ILE n 1 153 ASP n 1 154 TYR n 1 155 ASP n 1 156 CYS n 1 157 VAL n 1 158 SER n 1 159 PHE n 1 160 CYS n 1 161 TYR n 1 162 MET n 1 163 HIS n 1 164 HIS n 1 165 MET n 1 166 GLU n 1 167 LEU n 1 168 PRO n 1 169 THR n 1 170 GLY n 1 171 VAL n 1 172 HIS n 1 173 ALA n 1 174 GLY n 1 175 THR n 1 176 ASP n 1 177 LEU n 1 178 GLU n 1 179 GLY n 1 180 ASN n 1 181 PHE n 1 182 TYR n 1 183 GLY n 1 184 PRO n 1 185 PHE n 1 186 VAL n 1 187 ASP n 1 188 ARG n 1 189 GLN n 1 190 THR n 1 191 ALA n 1 192 GLN n 1 193 ALA n 1 194 ALA n 1 195 GLY n 1 196 THR n 1 197 ASP n 1 198 THR n 1 199 THR n 1 200 ILE n 1 201 THR n 1 202 VAL n 1 203 ASN n 1 204 VAL n 1 205 LEU n 1 206 ALA n 1 207 TRP n 1 208 LEU n 1 209 TYR n 1 210 ALA n 1 211 ALA n 1 212 VAL n 1 213 ILE n 1 214 ASN n 1 215 GLY n 1 216 ASP n 1 217 ARG n 1 218 TRP n 1 219 PHE n 1 220 LEU n 1 221 ASN n 1 222 ARG n 1 223 PHE n 1 224 THR n 1 225 THR n 1 226 THR n 1 227 LEU n 1 228 ASN n 1 229 ASP n 1 230 PHE n 1 231 ASN n 1 232 LEU n 1 233 VAL n 1 234 ALA n 1 235 MET n 1 236 LYS n 1 237 TYR n 1 238 ASN n 1 239 TYR n 1 240 GLU n 1 241 PRO n 1 242 LEU n 1 243 THR n 1 244 GLN n 1 245 ASP n 1 246 HIS n 1 247 VAL n 1 248 ASP n 1 249 ILE n 1 250 LEU n 1 251 GLY n 1 252 PRO n 1 253 LEU n 1 254 SER n 1 255 ALA n 1 256 GLN n 1 257 THR n 1 258 GLY n 1 259 ILE n 1 260 ALA n 1 261 VAL n 1 262 LEU n 1 263 ASP n 1 264 MET n 1 265 CYS n 1 266 ALA n 1 267 SER n 1 268 LEU n 1 269 LYS n 1 270 GLU n 1 271 LEU n 1 272 LEU n 1 273 GLN n 1 274 ASN n 1 275 GLY n 1 276 MET n 1 277 ASN n 1 278 GLY n 1 279 ARG n 1 280 THR n 1 281 ILE n 1 282 LEU n 1 283 GLY n 1 284 SER n 1 285 ALA n 1 286 LEU n 1 287 LEU n 1 288 GLU n 1 289 ASP n 1 290 GLU n 1 291 PHE n 1 292 THR n 1 293 PRO n 1 294 PHE n 1 295 ASP n 1 296 VAL n 1 297 VAL n 1 298 ARG n 1 299 GLN n 1 300 CYS n 1 301 SER n 1 302 GLY n 1 303 VAL n 1 304 THR n 1 305 PHE n 1 306 GLN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 306 _entity_src_gen.gene_src_common_name 2019-nCoV _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'rep, 1a-1b' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Severe acute respiratory syndrome coronavirus 2' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 2697049 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code R1AB_SARS2 _struct_ref.pdbx_db_accession P0DTD1 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGH SMQNCVLKLKVDTANPKTPKYKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFC YMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTITVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYE PLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQCSGVTFQ ; _struct_ref.pdbx_align_begin 3264 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 6YT8 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 306 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P0DTD1 _struct_ref_seq.db_align_beg 3264 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 3569 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 306 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DMS non-polymer . 'DIMETHYL SULFOXIDE' ? 'C2 H6 O S' 78.133 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 IMD non-polymer . IMIDAZOLE ? 'C3 H5 N2 1' 69.085 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PEG non-polymer . 'DI(HYDROXYETHYL)ETHER' ? 'C4 H10 O3' 106.120 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PK8 non-polymer . '9-oxa-7-thia-1-azonia-8$l^{2}-zincabicyclo[4.3.0]nona-1,3,5-triene' ? 'C5 H4 N O S Zn 1' 191.565 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6YT8 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 1.94 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 36.72 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method COUNTER-DIFFUSION _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;Co-crystallization with the compound was achieved by equlibrating a 6.25 mg/ml protein solution in 20 mM HEPES buffer (pH 7.8) containing 1 mM DTT, 1mM EDTA, and 150 mM NaCl against a reservoir solution of 100 mM MIB buffer (2:3:3 molar ratio of malonic acid, imidazole, and boric acid), pH 7.5, containing 25% v/v PEG 1500 and 5% v/v DMSO. Prior to crystallization compound solutions in DMSO were dried onto the wells of SwissCI 96-well plates. To achieve reproducible crystal growth seeding was used. Crystals appeared within a few hours and reached their final size after 2 -3 days. ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2020-04-13 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0332 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'PETRA III, DESY BEAMLINE P11' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.0332 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline P11 _diffrn_source.pdbx_synchrotron_site 'PETRA III, DESY' # _reflns.B_iso_Wilson_estimate 33.23 _reflns.entry_id 6YT8 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.05 _reflns.d_resolution_low 48 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 15168 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 92.18 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 3.7 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 9.4 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.999 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.05 _reflns_shell.d_res_low 2.11 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 1278 _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.766 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 37.78 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6YT8 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.05 _refine.ls_d_res_low 24.06 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 15149 _refine.ls_number_reflns_R_free 505 _refine.ls_number_reflns_R_work 14644 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 92.13 _refine.ls_percent_reflns_R_free 3.33 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2044 _refine.ls_R_factor_R_free 0.2327 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2035 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.35 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 6YNQ _refine.pdbx_stereochemistry_target_values 'GeoStd + Monomer Library + CDL v1.2' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 31.9829 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.3355 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 2.05 _refine_hist.d_res_low 24.06 _refine_hist.number_atoms_solvent 164 _refine_hist.number_atoms_total 2564 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 2367 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 33 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.0065 ? 2506 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.5630 ? 3396 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.0446 ? 375 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.0034 ? 441 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 16.8811 ? 895 ? f_dihedral_angle_d ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.05 2.22 . . 111 3268 97.83 . . . 0.4092 . 0.3230 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.27 2.58 . . 133 3747 98.98 . . . 0.2701 . 0.2593 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.58 3.25 . . 136 3948 99.63 . . . 0.3040 . 0.2172 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.25 24.06 . . 125 3681 90.94 . . . 0.1687 . 0.1633 . . . . . . . . . . . # _struct.entry_id 6YT8 _struct.title 'Structure of SARS-CoV-2 Main Protease bound to pyrithione zinc' _struct.pdbx_descriptor 'Non-structural polyprotein 1ab' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6YT8 _struct_keywords.text 'SARS-CoV-2, mPro, COVID-!9, PEPTIDE BINDING PROTEIN' _struct_keywords.pdbx_keywords 'PEPTIDE BINDING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? G N N 6 ? H N N 7 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 SER A 10 ? GLY A 15 ? SER A 10 GLY A 15 1 ? 6 HELX_P HELX_P2 AA2 HIS A 41 ? CYS A 44 ? HIS A 41 CYS A 44 5 ? 4 HELX_P HELX_P3 AA3 GLU A 47 ? ASN A 51 ? GLU A 47 ASN A 51 5 ? 5 HELX_P HELX_P4 AA4 ASN A 53 ? ARG A 60 ? ASN A 53 ARG A 60 1 ? 8 HELX_P HELX_P5 AA5 SER A 62 ? HIS A 64 ? SER A 62 HIS A 64 5 ? 3 HELX_P HELX_P6 AA6 ILE A 200 ? ASN A 214 ? ILE A 200 ASN A 214 1 ? 15 HELX_P HELX_P7 AA7 THR A 226 ? TYR A 237 ? THR A 226 TYR A 237 1 ? 12 HELX_P HELX_P8 AA8 THR A 243 ? LEU A 250 ? THR A 243 LEU A 250 1 ? 8 HELX_P HELX_P9 AA9 LEU A 250 ? GLY A 258 ? LEU A 250 GLY A 258 1 ? 9 HELX_P HELX_P10 AB1 ALA A 260 ? GLY A 275 ? ALA A 260 GLY A 275 1 ? 16 HELX_P HELX_P11 AB2 THR A 292 ? CYS A 300 ? THR A 292 CYS A 300 1 ? 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale none ? A CYS 145 SG ? ? ? 1_555 B PK8 . O01 B ? A CYS 145 A PK8 401 1_555 ? ? ? ? ? ? ? 1.474 ? ? metalc1 metalc ? ? A HIS 41 NE2 ? ? ? 1_555 B PK8 . ZN2 A ? A HIS 41 A PK8 401 1_555 ? ? ? ? ? ? ? 2.115 ? ? metalc2 metalc ? ? A CYS 145 SG ? ? ? 1_555 B PK8 . ZN2 A ? A CYS 145 A PK8 401 1_555 ? ? ? ? ? ? ? 2.277 ? ? metalc3 metalc ? ? A CYS 145 SG ? ? ? 1_555 B PK8 . ZN2 B ? A CYS 145 A PK8 401 1_555 ? ? ? ? ? ? ? 2.773 ? ? metalc4 metalc ? ? A HIS 164 O ? ? ? 1_555 B PK8 . ZN2 B ? A HIS 164 A PK8 401 1_555 ? ? ? ? ? ? ? 2.576 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 7 ? AA2 ? 5 ? AA3 ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA1 5 6 ? anti-parallel AA1 6 7 ? anti-parallel AA2 1 2 ? parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel AA3 1 2 ? parallel AA3 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 VAL A 73 ? LEU A 75 ? VAL A 73 LEU A 75 AA1 2 PHE A 66 ? ALA A 70 ? PHE A 66 ALA A 70 AA1 3 MET A 17 ? CYS A 22 ? MET A 17 CYS A 22 AA1 4 THR A 25 ? LEU A 32 ? THR A 25 LEU A 32 AA1 5 VAL A 35 ? PRO A 39 ? VAL A 35 PRO A 39 AA1 6 VAL A 86 ? VAL A 91 ? VAL A 86 VAL A 91 AA1 7 VAL A 77 ? GLN A 83 ? VAL A 77 GLN A 83 AA2 1 TYR A 101 ? PHE A 103 ? TYR A 101 PHE A 103 AA2 2 CYS A 156 ? GLU A 166 ? CYS A 156 GLU A 166 AA2 3 VAL A 148 ? ASP A 153 ? VAL A 148 ASP A 153 AA2 4 THR A 111 ? TYR A 118 ? THR A 111 TYR A 118 AA2 5 SER A 121 ? ALA A 129 ? SER A 121 ALA A 129 AA3 1 TYR A 101 ? PHE A 103 ? TYR A 101 PHE A 103 AA3 2 CYS A 156 ? GLU A 166 ? CYS A 156 GLU A 166 AA3 3 HIS A 172 ? THR A 175 ? HIS A 172 THR A 175 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O LEU A 75 ? O LEU A 75 N VAL A 68 ? N VAL A 68 AA1 2 3 O GLN A 69 ? O GLN A 69 N GLN A 19 ? N GLN A 19 AA1 3 4 N VAL A 20 ? N VAL A 20 O LEU A 27 ? O LEU A 27 AA1 4 5 N LEU A 30 ? N LEU A 30 O TYR A 37 ? O TYR A 37 AA1 5 6 N VAL A 36 ? N VAL A 36 O LEU A 89 ? O LEU A 89 AA1 6 7 O VAL A 86 ? O VAL A 86 N GLN A 83 ? N GLN A 83 AA2 1 2 N LYS A 102 ? N LYS A 102 O PHE A 159 ? O PHE A 159 AA2 2 3 O SER A 158 ? O SER A 158 N ASN A 151 ? N ASN A 151 AA2 3 4 O PHE A 150 ? O PHE A 150 N SER A 113 ? N SER A 113 AA2 4 5 N PHE A 112 ? N PHE A 112 O CYS A 128 ? O CYS A 128 AA3 1 2 N LYS A 102 ? N LYS A 102 O PHE A 159 ? O PHE A 159 AA3 2 3 N MET A 162 ? N MET A 162 O THR A 175 ? O THR A 175 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A PK8 401 ? 6 'binding site for residue PK8 A 401' AC2 Software A IMD 402 ? 5 'binding site for residue IMD A 402' AC3 Software A DMS 403 ? 7 'binding site for residue DMS A 403' AC4 Software A PEG 404 ? 9 'binding site for residue PEG A 404' AC5 Software A PEG 405 ? 9 'binding site for residue PEG A 405' AC6 Software A CL 406 ? 4 'binding site for residue CL A 406' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 THR A 26 ? THR A 26 . ? 1_555 ? 2 AC1 6 HIS A 41 ? HIS A 41 . ? 1_555 ? 3 AC1 6 ASN A 142 ? ASN A 142 . ? 1_555 ? 4 AC1 6 CYS A 145 ? CYS A 145 . ? 1_555 ? 5 AC1 6 HIS A 164 ? HIS A 164 . ? 1_555 ? 6 AC1 6 DMS D . ? DMS A 403 . ? 1_555 ? 7 AC2 5 GLN A 74 ? GLN A 74 . ? 1_564 ? 8 AC2 5 ARG A 76 ? ARG A 76 . ? 1_564 ? 9 AC2 5 ARG A 222 ? ARG A 222 . ? 1_555 ? 10 AC2 5 THR A 224 ? THR A 224 . ? 1_555 ? 11 AC2 5 HOH H . ? HOH A 616 . ? 1_564 ? 12 AC3 7 PHE A 140 ? PHE A 140 . ? 1_555 ? 13 AC3 7 LEU A 141 ? LEU A 141 . ? 1_555 ? 14 AC3 7 CYS A 145 ? CYS A 145 . ? 1_555 ? 15 AC3 7 HIS A 163 ? HIS A 163 . ? 1_555 ? 16 AC3 7 MET A 165 ? MET A 165 . ? 1_555 ? 17 AC3 7 GLU A 166 ? GLU A 166 . ? 1_555 ? 18 AC3 7 PK8 B . ? PK8 A 401 . ? 1_555 ? 19 AC4 9 THR A 199 ? THR A 199 . ? 1_555 ? 20 AC4 9 TYR A 237 ? TYR A 237 . ? 1_555 ? 21 AC4 9 TYR A 239 ? TYR A 239 . ? 1_555 ? 22 AC4 9 LEU A 272 ? LEU A 272 . ? 1_555 ? 23 AC4 9 LEU A 287 ? LEU A 287 . ? 1_555 ? 24 AC4 9 HOH H . ? HOH A 510 . ? 1_555 ? 25 AC4 9 HOH H . ? HOH A 529 . ? 1_555 ? 26 AC4 9 HOH H . ? HOH A 536 . ? 1_555 ? 27 AC4 9 HOH H . ? HOH A 537 . ? 1_555 ? 28 AC5 9 PRO A 108 ? PRO A 108 . ? 1_555 ? 29 AC5 9 GLY A 109 ? GLY A 109 . ? 1_555 ? 30 AC5 9 ILE A 200 ? ILE A 200 . ? 1_555 ? 31 AC5 9 VAL A 202 ? VAL A 202 . ? 1_555 ? 32 AC5 9 GLU A 240 ? GLU A 240 . ? 1_555 ? 33 AC5 9 HIS A 246 ? HIS A 246 . ? 1_555 ? 34 AC5 9 HOH H . ? HOH A 513 . ? 1_555 ? 35 AC5 9 HOH H . ? HOH A 558 . ? 1_555 ? 36 AC5 9 HOH H . ? HOH A 571 . ? 1_555 ? 37 AC6 4 GLN A 127 ? GLN A 127 . ? 1_555 ? 38 AC6 4 GLU A 290 ? GLU A 290 . ? 1_555 ? 39 AC6 4 PHE A 291 ? PHE A 291 . ? 1_555 ? 40 AC6 4 ASP A 295 ? ASP A 295 . ? 1_555 ? # _atom_sites.entry_id 6YT8 _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.008798 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.002037 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.018713 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.023094 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.scat_dispersion_real _atom_type.scat_dispersion_imag _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c _atom_type.scat_source _atom_type.scat_dispersion_source C ? ? 3.54356 2.42580 ? ? 25.62398 1.50364 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? CL ? ? 9.50761 7.44341 ? ? 1.04373 23.83732 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? H ? ? 0.51345 0.48472 ? ? 24.73122 6.32584 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? N ? ? 4.01032 2.96436 ? ? 19.97189 1.75589 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? O ? ? 4.49882 3.47563 ? ? 15.80542 1.70748 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? S ? ? 9.55732 6.39887 ? ? 1.23737 29.19336 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? ZN ? ? 24.64596 5.25405 ? ? 2.14387 29.76375 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 1 1 SER SER A . n A 1 2 GLY 2 2 2 GLY GLY A . n A 1 3 PHE 3 3 3 PHE PHE A . n A 1 4 ARG 4 4 4 ARG ARG A . n A 1 5 LYS 5 5 5 LYS LYS A . n A 1 6 MET 6 6 6 MET MET A . n A 1 7 ALA 7 7 7 ALA ALA A . n A 1 8 PHE 8 8 8 PHE PHE A . n A 1 9 PRO 9 9 9 PRO PRO A . n A 1 10 SER 10 10 10 SER SER A . n A 1 11 GLY 11 11 11 GLY GLY A . n A 1 12 LYS 12 12 12 LYS LYS A . n A 1 13 VAL 13 13 13 VAL VAL A . n A 1 14 GLU 14 14 14 GLU GLU A . n A 1 15 GLY 15 15 15 GLY GLY A . n A 1 16 CYS 16 16 16 CYS CYS A . n A 1 17 MET 17 17 17 MET MET A . n A 1 18 VAL 18 18 18 VAL VAL A . n A 1 19 GLN 19 19 19 GLN GLN A . n A 1 20 VAL 20 20 20 VAL VAL A . n A 1 21 THR 21 21 21 THR THR A . n A 1 22 CYS 22 22 22 CYS CYS A . n A 1 23 GLY 23 23 23 GLY GLY A . n A 1 24 THR 24 24 24 THR THR A . n A 1 25 THR 25 25 25 THR THR A . n A 1 26 THR 26 26 26 THR THR A . n A 1 27 LEU 27 27 27 LEU LEU A . n A 1 28 ASN 28 28 28 ASN ASN A . n A 1 29 GLY 29 29 29 GLY GLY A . n A 1 30 LEU 30 30 30 LEU LEU A . n A 1 31 TRP 31 31 31 TRP TRP A . n A 1 32 LEU 32 32 32 LEU LEU A . n A 1 33 ASP 33 33 33 ASP ASP A . n A 1 34 ASP 34 34 34 ASP ASP A . n A 1 35 VAL 35 35 35 VAL VAL A . n A 1 36 VAL 36 36 36 VAL VAL A . n A 1 37 TYR 37 37 37 TYR TYR A . n A 1 38 CYS 38 38 38 CYS CYS A . n A 1 39 PRO 39 39 39 PRO PRO A . n A 1 40 ARG 40 40 40 ARG ARG A . n A 1 41 HIS 41 41 41 HIS HIS A . n A 1 42 VAL 42 42 42 VAL VAL A . n A 1 43 ILE 43 43 43 ILE ILE A . n A 1 44 CYS 44 44 44 CYS CYS A . n A 1 45 THR 45 45 45 THR THR A . n A 1 46 SER 46 46 46 SER SER A . n A 1 47 GLU 47 47 47 GLU GLU A . n A 1 48 ASP 48 48 48 ASP ASP A . n A 1 49 MET 49 49 49 MET MET A . n A 1 50 LEU 50 50 50 LEU LEU A . n A 1 51 ASN 51 51 51 ASN ASN A . n A 1 52 PRO 52 52 52 PRO PRO A . n A 1 53 ASN 53 53 53 ASN ASN A . n A 1 54 TYR 54 54 54 TYR TYR A . n A 1 55 GLU 55 55 55 GLU GLU A . n A 1 56 ASP 56 56 56 ASP ASP A . n A 1 57 LEU 57 57 57 LEU LEU A . n A 1 58 LEU 58 58 58 LEU LEU A . n A 1 59 ILE 59 59 59 ILE ILE A . n A 1 60 ARG 60 60 60 ARG ARG A . n A 1 61 LYS 61 61 61 LYS LYS A . n A 1 62 SER 62 62 62 SER SER A . n A 1 63 ASN 63 63 63 ASN ASN A . n A 1 64 HIS 64 64 64 HIS HIS A . n A 1 65 ASN 65 65 65 ASN ASN A . n A 1 66 PHE 66 66 66 PHE PHE A . n A 1 67 LEU 67 67 67 LEU LEU A . n A 1 68 VAL 68 68 68 VAL VAL A . n A 1 69 GLN 69 69 69 GLN GLN A . n A 1 70 ALA 70 70 70 ALA ALA A . n A 1 71 GLY 71 71 71 GLY GLY A . n A 1 72 ASN 72 72 72 ASN ASN A . n A 1 73 VAL 73 73 73 VAL VAL A . n A 1 74 GLN 74 74 74 GLN GLN A . n A 1 75 LEU 75 75 75 LEU LEU A . n A 1 76 ARG 76 76 76 ARG ARG A . n A 1 77 VAL 77 77 77 VAL VAL A . n A 1 78 ILE 78 78 78 ILE ILE A . n A 1 79 GLY 79 79 79 GLY GLY A . n A 1 80 HIS 80 80 80 HIS HIS A . n A 1 81 SER 81 81 81 SER SER A . n A 1 82 MET 82 82 82 MET MET A . n A 1 83 GLN 83 83 83 GLN GLN A . n A 1 84 ASN 84 84 84 ASN ASN A . n A 1 85 CYS 85 85 85 CYS CYS A . n A 1 86 VAL 86 86 86 VAL VAL A . n A 1 87 LEU 87 87 87 LEU LEU A . n A 1 88 LYS 88 88 88 LYS LYS A . n A 1 89 LEU 89 89 89 LEU LEU A . n A 1 90 LYS 90 90 90 LYS LYS A . n A 1 91 VAL 91 91 91 VAL VAL A . n A 1 92 ASP 92 92 92 ASP ASP A . n A 1 93 THR 93 93 93 THR THR A . n A 1 94 ALA 94 94 94 ALA ALA A . n A 1 95 ASN 95 95 95 ASN ASN A . n A 1 96 PRO 96 96 96 PRO PRO A . n A 1 97 LYS 97 97 97 LYS LYS A . n A 1 98 THR 98 98 98 THR THR A . n A 1 99 PRO 99 99 99 PRO PRO A . n A 1 100 LYS 100 100 100 LYS LYS A . n A 1 101 TYR 101 101 101 TYR TYR A . n A 1 102 LYS 102 102 102 LYS LYS A . n A 1 103 PHE 103 103 103 PHE PHE A . n A 1 104 VAL 104 104 104 VAL VAL A . n A 1 105 ARG 105 105 105 ARG ARG A . n A 1 106 ILE 106 106 106 ILE ILE A . n A 1 107 GLN 107 107 107 GLN GLN A . n A 1 108 PRO 108 108 108 PRO PRO A . n A 1 109 GLY 109 109 109 GLY GLY A . n A 1 110 GLN 110 110 110 GLN GLN A . n A 1 111 THR 111 111 111 THR THR A . n A 1 112 PHE 112 112 112 PHE PHE A . n A 1 113 SER 113 113 113 SER SER A . n A 1 114 VAL 114 114 114 VAL VAL A . n A 1 115 LEU 115 115 115 LEU LEU A . n A 1 116 ALA 116 116 116 ALA ALA A . n A 1 117 CYS 117 117 117 CYS CYS A . n A 1 118 TYR 118 118 118 TYR TYR A . n A 1 119 ASN 119 119 119 ASN ASN A . n A 1 120 GLY 120 120 120 GLY GLY A . n A 1 121 SER 121 121 121 SER SER A . n A 1 122 PRO 122 122 122 PRO PRO A . n A 1 123 SER 123 123 123 SER SER A . n A 1 124 GLY 124 124 124 GLY GLY A . n A 1 125 VAL 125 125 125 VAL VAL A . n A 1 126 TYR 126 126 126 TYR TYR A . n A 1 127 GLN 127 127 127 GLN GLN A . n A 1 128 CYS 128 128 128 CYS CYS A . n A 1 129 ALA 129 129 129 ALA ALA A . n A 1 130 MET 130 130 130 MET MET A . n A 1 131 ARG 131 131 131 ARG ARG A . n A 1 132 PRO 132 132 132 PRO PRO A . n A 1 133 ASN 133 133 133 ASN ASN A . n A 1 134 PHE 134 134 134 PHE PHE A . n A 1 135 THR 135 135 135 THR THR A . n A 1 136 ILE 136 136 136 ILE ILE A . n A 1 137 LYS 137 137 137 LYS LYS A . n A 1 138 GLY 138 138 138 GLY GLY A . n A 1 139 SER 139 139 139 SER SER A . n A 1 140 PHE 140 140 140 PHE PHE A . n A 1 141 LEU 141 141 141 LEU LEU A . n A 1 142 ASN 142 142 142 ASN ASN A . n A 1 143 GLY 143 143 143 GLY GLY A . n A 1 144 SER 144 144 144 SER SER A . n A 1 145 CYS 145 145 145 CYS CYS A . n A 1 146 GLY 146 146 146 GLY GLY A . n A 1 147 SER 147 147 147 SER SER A . n A 1 148 VAL 148 148 148 VAL VAL A . n A 1 149 GLY 149 149 149 GLY GLY A . n A 1 150 PHE 150 150 150 PHE PHE A . n A 1 151 ASN 151 151 151 ASN ASN A . n A 1 152 ILE 152 152 152 ILE ILE A . n A 1 153 ASP 153 153 153 ASP ASP A . n A 1 154 TYR 154 154 154 TYR TYR A . n A 1 155 ASP 155 155 155 ASP ASP A . n A 1 156 CYS 156 156 156 CYS CYS A . n A 1 157 VAL 157 157 157 VAL VAL A . n A 1 158 SER 158 158 158 SER SER A . n A 1 159 PHE 159 159 159 PHE PHE A . n A 1 160 CYS 160 160 160 CYS CYS A . n A 1 161 TYR 161 161 161 TYR TYR A . n A 1 162 MET 162 162 162 MET MET A . n A 1 163 HIS 163 163 163 HIS HIS A . n A 1 164 HIS 164 164 164 HIS HIS A . n A 1 165 MET 165 165 165 MET MET A . n A 1 166 GLU 166 166 166 GLU GLU A . n A 1 167 LEU 167 167 167 LEU LEU A . n A 1 168 PRO 168 168 168 PRO PRO A . n A 1 169 THR 169 169 169 THR THR A . n A 1 170 GLY 170 170 170 GLY GLY A . n A 1 171 VAL 171 171 171 VAL VAL A . n A 1 172 HIS 172 172 172 HIS HIS A . n A 1 173 ALA 173 173 173 ALA ALA A . n A 1 174 GLY 174 174 174 GLY GLY A . n A 1 175 THR 175 175 175 THR THR A . n A 1 176 ASP 176 176 176 ASP ASP A . n A 1 177 LEU 177 177 177 LEU LEU A . n A 1 178 GLU 178 178 178 GLU GLU A . n A 1 179 GLY 179 179 179 GLY GLY A . n A 1 180 ASN 180 180 180 ASN ASN A . n A 1 181 PHE 181 181 181 PHE PHE A . n A 1 182 TYR 182 182 182 TYR TYR A . n A 1 183 GLY 183 183 183 GLY GLY A . n A 1 184 PRO 184 184 184 PRO PRO A . n A 1 185 PHE 185 185 185 PHE PHE A . n A 1 186 VAL 186 186 186 VAL VAL A . n A 1 187 ASP 187 187 187 ASP ASP A . n A 1 188 ARG 188 188 188 ARG ARG A . n A 1 189 GLN 189 189 189 GLN GLN A . n A 1 190 THR 190 190 190 THR THR A . n A 1 191 ALA 191 191 191 ALA ALA A . n A 1 192 GLN 192 192 192 GLN GLN A . n A 1 193 ALA 193 193 193 ALA ALA A . n A 1 194 ALA 194 194 194 ALA ALA A . n A 1 195 GLY 195 195 195 GLY GLY A . n A 1 196 THR 196 196 196 THR THR A . n A 1 197 ASP 197 197 197 ASP ASP A . n A 1 198 THR 198 198 198 THR THR A . n A 1 199 THR 199 199 199 THR THR A . n A 1 200 ILE 200 200 200 ILE ILE A . n A 1 201 THR 201 201 201 THR THR A . n A 1 202 VAL 202 202 202 VAL VAL A . n A 1 203 ASN 203 203 203 ASN ASN A . n A 1 204 VAL 204 204 204 VAL VAL A . n A 1 205 LEU 205 205 205 LEU LEU A . n A 1 206 ALA 206 206 206 ALA ALA A . n A 1 207 TRP 207 207 207 TRP TRP A . n A 1 208 LEU 208 208 208 LEU LEU A . n A 1 209 TYR 209 209 209 TYR TYR A . n A 1 210 ALA 210 210 210 ALA ALA A . n A 1 211 ALA 211 211 211 ALA ALA A . n A 1 212 VAL 212 212 212 VAL VAL A . n A 1 213 ILE 213 213 213 ILE ILE A . n A 1 214 ASN 214 214 214 ASN ASN A . n A 1 215 GLY 215 215 215 GLY GLY A . n A 1 216 ASP 216 216 216 ASP ASP A . n A 1 217 ARG 217 217 217 ARG ARG A . n A 1 218 TRP 218 218 218 TRP TRP A . n A 1 219 PHE 219 219 219 PHE PHE A . n A 1 220 LEU 220 220 220 LEU LEU A . n A 1 221 ASN 221 221 221 ASN ASN A . n A 1 222 ARG 222 222 222 ARG ARG A . n A 1 223 PHE 223 223 223 PHE PHE A . n A 1 224 THR 224 224 224 THR THR A . n A 1 225 THR 225 225 225 THR THR A . n A 1 226 THR 226 226 226 THR THR A . n A 1 227 LEU 227 227 227 LEU LEU A . n A 1 228 ASN 228 228 228 ASN ASN A . n A 1 229 ASP 229 229 229 ASP ASP A . n A 1 230 PHE 230 230 230 PHE PHE A . n A 1 231 ASN 231 231 231 ASN ASN A . n A 1 232 LEU 232 232 232 LEU LEU A . n A 1 233 VAL 233 233 233 VAL VAL A . n A 1 234 ALA 234 234 234 ALA ALA A . n A 1 235 MET 235 235 235 MET MET A . n A 1 236 LYS 236 236 236 LYS LYS A . n A 1 237 TYR 237 237 237 TYR TYR A . n A 1 238 ASN 238 238 238 ASN ASN A . n A 1 239 TYR 239 239 239 TYR TYR A . n A 1 240 GLU 240 240 240 GLU GLU A . n A 1 241 PRO 241 241 241 PRO PRO A . n A 1 242 LEU 242 242 242 LEU LEU A . n A 1 243 THR 243 243 243 THR THR A . n A 1 244 GLN 244 244 244 GLN GLN A . n A 1 245 ASP 245 245 245 ASP ASP A . n A 1 246 HIS 246 246 246 HIS HIS A . n A 1 247 VAL 247 247 247 VAL VAL A . n A 1 248 ASP 248 248 248 ASP ASP A . n A 1 249 ILE 249 249 249 ILE ILE A . n A 1 250 LEU 250 250 250 LEU LEU A . n A 1 251 GLY 251 251 251 GLY GLY A . n A 1 252 PRO 252 252 252 PRO PRO A . n A 1 253 LEU 253 253 253 LEU LEU A . n A 1 254 SER 254 254 254 SER SER A . n A 1 255 ALA 255 255 255 ALA ALA A . n A 1 256 GLN 256 256 256 GLN GLN A . n A 1 257 THR 257 257 257 THR THR A . n A 1 258 GLY 258 258 258 GLY GLY A . n A 1 259 ILE 259 259 259 ILE ILE A . n A 1 260 ALA 260 260 260 ALA ALA A . n A 1 261 VAL 261 261 261 VAL VAL A . n A 1 262 LEU 262 262 262 LEU LEU A . n A 1 263 ASP 263 263 263 ASP ASP A . n A 1 264 MET 264 264 264 MET MET A . n A 1 265 CYS 265 265 265 CYS CYS A . n A 1 266 ALA 266 266 266 ALA ALA A . n A 1 267 SER 267 267 267 SER SER A . n A 1 268 LEU 268 268 268 LEU LEU A . n A 1 269 LYS 269 269 269 LYS LYS A . n A 1 270 GLU 270 270 270 GLU GLU A . n A 1 271 LEU 271 271 271 LEU LEU A . n A 1 272 LEU 272 272 272 LEU LEU A . n A 1 273 GLN 273 273 273 GLN GLN A . n A 1 274 ASN 274 274 274 ASN ASN A . n A 1 275 GLY 275 275 275 GLY GLY A . n A 1 276 MET 276 276 276 MET MET A . n A 1 277 ASN 277 277 277 ASN ASN A . n A 1 278 GLY 278 278 278 GLY GLY A . n A 1 279 ARG 279 279 279 ARG ARG A . n A 1 280 THR 280 280 280 THR THR A . n A 1 281 ILE 281 281 281 ILE ILE A . n A 1 282 LEU 282 282 282 LEU LEU A . n A 1 283 GLY 283 283 283 GLY GLY A . n A 1 284 SER 284 284 284 SER SER A . n A 1 285 ALA 285 285 285 ALA ALA A . n A 1 286 LEU 286 286 286 LEU LEU A . n A 1 287 LEU 287 287 287 LEU LEU A . n A 1 288 GLU 288 288 288 GLU GLU A . n A 1 289 ASP 289 289 289 ASP ASP A . n A 1 290 GLU 290 290 290 GLU GLU A . n A 1 291 PHE 291 291 291 PHE PHE A . n A 1 292 THR 292 292 292 THR THR A . n A 1 293 PRO 293 293 293 PRO PRO A . n A 1 294 PHE 294 294 294 PHE PHE A . n A 1 295 ASP 295 295 295 ASP ASP A . n A 1 296 VAL 296 296 296 VAL VAL A . n A 1 297 VAL 297 297 297 VAL VAL A . n A 1 298 ARG 298 298 298 ARG ARG A . n A 1 299 GLN 299 299 299 GLN GLN A . n A 1 300 CYS 300 300 300 CYS CYS A . n A 1 301 SER 301 301 301 SER SER A . n A 1 302 GLY 302 302 302 GLY GLY A . n A 1 303 VAL 303 303 303 VAL VAL A . n A 1 304 THR 304 304 304 THR THR A . n A 1 305 PHE 305 305 305 PHE PHE A . n A 1 306 GLN 306 306 306 GLN GLN A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PK8 1 401 401 PK8 LIG A . C 3 IMD 1 402 601 IMD IMD A . D 4 DMS 1 403 801 DMS DMS A . E 5 PEG 1 404 901 PEG PEG A . F 5 PEG 1 405 1001 PEG PEG A . G 6 CL 1 406 1 CL CL A . H 7 HOH 1 501 122 HOH HOH A . H 7 HOH 2 502 154 HOH HOH A . H 7 HOH 3 503 81 HOH HOH A . H 7 HOH 4 504 127 HOH HOH A . H 7 HOH 5 505 132 HOH HOH A . H 7 HOH 6 506 95 HOH HOH A . H 7 HOH 7 507 107 HOH HOH A . H 7 HOH 8 508 130 HOH HOH A . H 7 HOH 9 509 119 HOH HOH A . H 7 HOH 10 510 28 HOH HOH A . H 7 HOH 11 511 88 HOH HOH A . H 7 HOH 12 512 125 HOH HOH A . H 7 HOH 13 513 136 HOH HOH A . H 7 HOH 14 514 53 HOH HOH A . H 7 HOH 15 515 121 HOH HOH A . H 7 HOH 16 516 109 HOH HOH A . H 7 HOH 17 517 102 HOH HOH A . H 7 HOH 18 518 100 HOH HOH A . H 7 HOH 19 519 140 HOH HOH A . H 7 HOH 20 520 142 HOH HOH A . H 7 HOH 21 521 50 HOH HOH A . H 7 HOH 22 522 27 HOH HOH A . H 7 HOH 23 523 49 HOH HOH A . H 7 HOH 24 524 124 HOH HOH A . H 7 HOH 25 525 23 HOH HOH A . H 7 HOH 26 526 58 HOH HOH A . H 7 HOH 27 527 134 HOH HOH A . H 7 HOH 28 528 21 HOH HOH A . H 7 HOH 29 529 159 HOH HOH A . H 7 HOH 30 530 64 HOH HOH A . H 7 HOH 31 531 150 HOH HOH A . H 7 HOH 32 532 68 HOH HOH A . H 7 HOH 33 533 34 HOH HOH A . H 7 HOH 34 534 11 HOH HOH A . H 7 HOH 35 535 17 HOH HOH A . H 7 HOH 36 536 19 HOH HOH A . H 7 HOH 37 537 71 HOH HOH A . H 7 HOH 38 538 63 HOH HOH A . H 7 HOH 39 539 105 HOH HOH A . H 7 HOH 40 540 7 HOH HOH A . H 7 HOH 41 541 108 HOH HOH A . H 7 HOH 42 542 110 HOH HOH A . H 7 HOH 43 543 104 HOH HOH A . H 7 HOH 44 544 123 HOH HOH A . H 7 HOH 45 545 37 HOH HOH A . H 7 HOH 46 546 62 HOH HOH A . H 7 HOH 47 547 48 HOH HOH A . H 7 HOH 48 548 76 HOH HOH A . H 7 HOH 49 549 32 HOH HOH A . H 7 HOH 50 550 47 HOH HOH A . H 7 HOH 51 551 137 HOH HOH A . H 7 HOH 52 552 111 HOH HOH A . H 7 HOH 53 553 91 HOH HOH A . H 7 HOH 54 554 146 HOH HOH A . H 7 HOH 55 555 1 HOH HOH A . H 7 HOH 56 556 20 HOH HOH A . H 7 HOH 57 557 15 HOH HOH A . H 7 HOH 58 558 66 HOH HOH A . H 7 HOH 59 559 4 HOH HOH A . H 7 HOH 60 560 96 HOH HOH A . H 7 HOH 61 561 46 HOH HOH A . H 7 HOH 62 562 31 HOH HOH A . H 7 HOH 63 563 98 HOH HOH A . H 7 HOH 64 564 2 HOH HOH A . H 7 HOH 65 565 93 HOH HOH A . H 7 HOH 66 566 157 HOH HOH A . H 7 HOH 67 567 3 HOH HOH A . H 7 HOH 68 568 14 HOH HOH A . H 7 HOH 69 569 29 HOH HOH A . H 7 HOH 70 570 133 HOH HOH A . H 7 HOH 71 571 163 HOH HOH A . H 7 HOH 72 572 70 HOH HOH A . H 7 HOH 73 573 120 HOH HOH A . H 7 HOH 74 574 25 HOH HOH A . H 7 HOH 75 575 83 HOH HOH A . H 7 HOH 76 576 106 HOH HOH A . H 7 HOH 77 577 10 HOH HOH A . H 7 HOH 78 578 156 HOH HOH A . H 7 HOH 79 579 144 HOH HOH A . H 7 HOH 80 580 6 HOH HOH A . H 7 HOH 81 581 72 HOH HOH A . H 7 HOH 82 582 114 HOH HOH A . H 7 HOH 83 583 73 HOH HOH A . H 7 HOH 84 584 131 HOH HOH A . H 7 HOH 85 585 16 HOH HOH A . H 7 HOH 86 586 128 HOH HOH A . H 7 HOH 87 587 129 HOH HOH A . H 7 HOH 88 588 141 HOH HOH A . H 7 HOH 89 589 155 HOH HOH A . H 7 HOH 90 590 153 HOH HOH A . H 7 HOH 91 591 8 HOH HOH A . H 7 HOH 92 592 9 HOH HOH A . H 7 HOH 93 593 143 HOH HOH A . H 7 HOH 94 594 60 HOH HOH A . H 7 HOH 95 595 12 HOH HOH A . H 7 HOH 96 596 135 HOH HOH A . H 7 HOH 97 597 33 HOH HOH A . H 7 HOH 98 598 5 HOH HOH A . H 7 HOH 99 599 59 HOH HOH A . H 7 HOH 100 600 44 HOH HOH A . H 7 HOH 101 601 82 HOH HOH A . H 7 HOH 102 602 84 HOH HOH A . H 7 HOH 103 603 113 HOH HOH A . H 7 HOH 104 604 79 HOH HOH A . H 7 HOH 105 605 13 HOH HOH A . H 7 HOH 106 606 78 HOH HOH A . H 7 HOH 107 607 56 HOH HOH A . H 7 HOH 108 608 74 HOH HOH A . H 7 HOH 109 609 75 HOH HOH A . H 7 HOH 110 610 51 HOH HOH A . H 7 HOH 111 611 77 HOH HOH A . H 7 HOH 112 612 103 HOH HOH A . H 7 HOH 113 613 18 HOH HOH A . H 7 HOH 114 614 43 HOH HOH A . H 7 HOH 115 615 87 HOH HOH A . H 7 HOH 116 616 39 HOH HOH A . H 7 HOH 117 617 35 HOH HOH A . H 7 HOH 118 618 42 HOH HOH A . H 7 HOH 119 619 92 HOH HOH A . H 7 HOH 120 620 22 HOH HOH A . H 7 HOH 121 621 24 HOH HOH A . H 7 HOH 122 622 26 HOH HOH A . H 7 HOH 123 623 38 HOH HOH A . H 7 HOH 124 624 61 HOH HOH A . H 7 HOH 125 625 30 HOH HOH A . H 7 HOH 126 626 117 HOH HOH A . H 7 HOH 127 627 126 HOH HOH A . H 7 HOH 128 628 65 HOH HOH A . H 7 HOH 129 629 162 HOH HOH A . H 7 HOH 130 630 148 HOH HOH A . H 7 HOH 131 631 85 HOH HOH A . H 7 HOH 132 632 97 HOH HOH A . H 7 HOH 133 633 45 HOH HOH A . H 7 HOH 134 634 54 HOH HOH A . H 7 HOH 135 635 115 HOH HOH A . H 7 HOH 136 636 67 HOH HOH A . H 7 HOH 137 637 118 HOH HOH A . H 7 HOH 138 638 89 HOH HOH A . H 7 HOH 139 639 158 HOH HOH A . H 7 HOH 140 640 139 HOH HOH A . H 7 HOH 141 641 52 HOH HOH A . H 7 HOH 142 642 99 HOH HOH A . H 7 HOH 143 643 161 HOH HOH A . H 7 HOH 144 644 138 HOH HOH A . H 7 HOH 145 645 149 HOH HOH A . H 7 HOH 146 646 90 HOH HOH A . H 7 HOH 147 647 36 HOH HOH A . H 7 HOH 148 648 57 HOH HOH A . H 7 HOH 149 649 147 HOH HOH A . H 7 HOH 150 650 80 HOH HOH A . H 7 HOH 151 651 164 HOH HOH A . H 7 HOH 152 652 69 HOH HOH A . H 7 HOH 153 653 41 HOH HOH A . H 7 HOH 154 654 55 HOH HOH A . H 7 HOH 155 655 151 HOH HOH A . H 7 HOH 156 656 94 HOH HOH A . H 7 HOH 157 657 160 HOH HOH A . H 7 HOH 158 658 152 HOH HOH A . H 7 HOH 159 659 86 HOH HOH A . H 7 HOH 160 660 116 HOH HOH A . H 7 HOH 161 661 112 HOH HOH A . H 7 HOH 162 662 101 HOH HOH A . H 7 HOH 163 663 40 HOH HOH A . H 7 HOH 164 664 145 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5600 ? 1 MORE -20 ? 1 'SSA (A^2)' 25290 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_555 -x,y,-z -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A ARG 217 ? A ARG 217 2 1 A HOH 620 ? H HOH . 3 1 A HOH 632 ? H HOH . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 NE2 ? A HIS 41 ? A HIS 41 ? 1_555 ZN2 A B PK8 . ? A PK8 401 ? 1_555 O01 A B PK8 . ? A PK8 401 ? 1_555 97.2 ? 2 NE2 ? A HIS 41 ? A HIS 41 ? 1_555 ZN2 A B PK8 . ? A PK8 401 ? 1_555 S03 A B PK8 . ? A PK8 401 ? 1_555 132.4 ? 3 O01 A B PK8 . ? A PK8 401 ? 1_555 ZN2 A B PK8 . ? A PK8 401 ? 1_555 S03 A B PK8 . ? A PK8 401 ? 1_555 89.6 ? 4 NE2 ? A HIS 41 ? A HIS 41 ? 1_555 ZN2 A B PK8 . ? A PK8 401 ? 1_555 SG ? A CYS 145 ? A CYS 145 ? 1_555 110.1 ? 5 O01 A B PK8 . ? A PK8 401 ? 1_555 ZN2 A B PK8 . ? A PK8 401 ? 1_555 SG ? A CYS 145 ? A CYS 145 ? 1_555 99.0 ? 6 S03 A B PK8 . ? A PK8 401 ? 1_555 ZN2 A B PK8 . ? A PK8 401 ? 1_555 SG ? A CYS 145 ? A CYS 145 ? 1_555 115.3 ? 7 SG ? A CYS 145 ? A CYS 145 ? 1_555 ZN2 B B PK8 . ? A PK8 401 ? 1_555 O01 A B PK8 . ? A PK8 401 ? 1_555 51.6 ? 8 SG ? A CYS 145 ? A CYS 145 ? 1_555 ZN2 B B PK8 . ? A PK8 401 ? 1_555 S03 A B PK8 . ? A PK8 401 ? 1_555 90.0 ? 9 O01 A B PK8 . ? A PK8 401 ? 1_555 ZN2 B B PK8 . ? A PK8 401 ? 1_555 S03 A B PK8 . ? A PK8 401 ? 1_555 42.7 ? 10 SG ? A CYS 145 ? A CYS 145 ? 1_555 ZN2 B B PK8 . ? A PK8 401 ? 1_555 O ? A HIS 164 ? A HIS 164 ? 1_555 70.5 ? 11 O01 A B PK8 . ? A PK8 401 ? 1_555 ZN2 B B PK8 . ? A PK8 401 ? 1_555 O ? A HIS 164 ? A HIS 164 ? 1_555 106.7 ? 12 S03 A B PK8 . ? A PK8 401 ? 1_555 ZN2 B B PK8 . ? A PK8 401 ? 1_555 O ? A HIS 164 ? A HIS 164 ? 1_555 146.6 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2020-05-06 2 'Structure model' 2 0 2020-05-20 3 'Structure model' 2 1 2020-12-02 4 'Structure model' 2 2 2020-12-09 5 'Structure model' 2 3 2021-01-13 6 'Structure model' 2 4 2021-04-14 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 2 'Structure model' author 'Coordinate replacement' 'Sequence discrepancy' 'L72 was replaced by N72' 3 5 'Structure model' repository Obsolete ? ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Atomic model' 3 2 'Structure model' 'Data collection' 4 2 'Structure model' 'Database references' 5 2 'Structure model' 'Derived calculations' 6 2 'Structure model' 'Polymer sequence' 7 2 'Structure model' 'Refinement description' 8 2 'Structure model' 'Structure summary' 9 3 'Structure model' 'Database references' 10 3 'Structure model' 'Derived calculations' 11 4 'Structure model' 'Database references' 12 5 'Structure model' Advisory 13 5 'Structure model' 'Database references' 14 5 'Structure model' Other 15 6 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' atom_site 2 2 'Structure model' entity 3 2 'Structure model' entity_name_com 4 2 'Structure model' entity_poly 5 2 'Structure model' entity_poly_seq 6 2 'Structure model' pdbx_nonpoly_scheme 7 2 'Structure model' pdbx_poly_seq_scheme 8 2 'Structure model' pdbx_struct_assembly_prop 9 2 'Structure model' pdbx_struct_conn_angle 10 2 'Structure model' pdbx_struct_special_symmetry 11 2 'Structure model' pdbx_validate_close_contact 12 2 'Structure model' pdbx_validate_torsion 13 2 'Structure model' refine 14 2 'Structure model' refine_hist 15 2 'Structure model' refine_ls_restr 16 2 'Structure model' refine_ls_shell 17 2 'Structure model' software 18 2 'Structure model' struct_conn 19 2 'Structure model' struct_ref_seq_dif 20 2 'Structure model' struct_site 21 2 'Structure model' struct_site_gen 22 3 'Structure model' citation 23 3 'Structure model' struct_conn 24 3 'Structure model' struct_conn_type 25 4 'Structure model' citation_author 26 5 'Structure model' citation_author 27 5 'Structure model' pdbx_database_PDB_obs_spr 28 5 'Structure model' pdbx_database_status 29 6 'Structure model' citation 30 6 'Structure model' citation_author # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_entity.formula_weight' 2 2 'Structure model' '_entity.pdbx_number_of_molecules' 3 2 'Structure model' '_entity_name_com.name' 4 2 'Structure model' '_entity_poly.pdbx_seq_one_letter_code' 5 2 'Structure model' '_entity_poly.pdbx_seq_one_letter_code_can' 6 2 'Structure model' '_entity_poly_seq.mon_id' 7 2 'Structure model' '_pdbx_poly_seq_scheme.auth_mon_id' 8 2 'Structure model' '_pdbx_poly_seq_scheme.mon_id' 9 2 'Structure model' '_pdbx_poly_seq_scheme.pdb_mon_id' 10 2 'Structure model' '_pdbx_struct_assembly_prop.value' 11 2 'Structure model' '_pdbx_struct_conn_angle.value' 12 2 'Structure model' '_pdbx_struct_special_symmetry.auth_seq_id' 13 2 'Structure model' '_pdbx_validate_torsion.phi' 14 2 'Structure model' '_pdbx_validate_torsion.psi' 15 2 'Structure model' '_refine.B_iso_mean' 16 2 'Structure model' '_refine.ls_R_factor_R_free' 17 2 'Structure model' '_refine.ls_R_factor_R_work' 18 2 'Structure model' '_refine.ls_R_factor_obs' 19 2 'Structure model' '_refine.ls_number_reflns_R_work' 20 2 'Structure model' '_refine.overall_SU_ML' 21 2 'Structure model' '_refine.pdbx_overall_phase_error' 22 2 'Structure model' '_refine.pdbx_stereochemistry_target_values' 23 2 'Structure model' '_refine.solvent_model_details' 24 2 'Structure model' '_refine_hist.number_atoms_solvent' 25 2 'Structure model' '_refine_hist.number_atoms_total' 26 2 'Structure model' '_refine_ls_restr.dev_ideal' 27 2 'Structure model' '_refine_ls_restr.number' 28 2 'Structure model' '_refine_ls_shell.R_factor_R_free' 29 2 'Structure model' '_refine_ls_shell.R_factor_R_work' 30 2 'Structure model' '_software.version' 31 2 'Structure model' '_struct_conn.pdbx_dist_value' 32 2 'Structure model' '_struct_site.pdbx_num_residues' 33 3 'Structure model' '_citation.country' 34 3 'Structure model' '_citation.journal_abbrev' 35 3 'Structure model' '_citation.journal_id_CSD' 36 3 'Structure model' '_citation.pdbx_database_id_DOI' 37 3 'Structure model' '_citation.title' 38 3 'Structure model' '_citation.year' 39 3 'Structure model' '_struct_conn.conn_type_id' 40 3 'Structure model' '_struct_conn.id' 41 3 'Structure model' '_struct_conn.pdbx_dist_value' 42 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 43 3 'Structure model' '_struct_conn.pdbx_ptnr2_label_alt_id' 44 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 45 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 46 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 47 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 48 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 49 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 50 3 'Structure model' '_struct_conn_type.id' 51 5 'Structure model' '_citation_author.identifier_ORCID' 52 5 'Structure model' '_citation_author.name' 53 5 'Structure model' '_pdbx_database_status.status_code' 54 5 'Structure model' '_pdbx_database_status.status_code_sf' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.18_3845 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XSCALE ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? . 4 # _pdbx_entry_details.entry_id 6YT8 _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest Y # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 OG1 A THR 25 ? ? O A HOH 502 ? ? 1.95 2 1 OE2 A GLU 178 ? ? O A HOH 504 ? ? 2.03 3 1 OD1 A ASP 48 ? ? O A HOH 506 ? ? 2.08 4 1 O A ILE 59 ? ? O A HOH 507 ? ? 2.11 5 1 O A HOH 635 ? ? O A HOH 662 ? ? 2.11 6 1 O A HOH 615 ? ? O A HOH 643 ? ? 2.19 7 1 NE2 A HIS 64 ? ? O A HOH 508 ? ? 2.19 8 1 O A HOH 504 ? ? O A HOH 642 ? ? 2.19 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 5 ? A -63.38 96.57 2 1 LYS A 5 ? B -67.05 98.18 3 1 ASP A 33 ? ? 54.12 -127.08 4 1 ASN A 51 ? ? -153.03 71.33 5 1 ASN A 84 ? ? 54.93 -111.71 6 1 TYR A 154 ? ? 58.12 -97.46 7 1 ALA A 191 ? ? -59.10 79.55 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'German Research Foundation (DFG)' Germany 'EXC 2056 - project ID 390715994' 1 'European Commission' 'European Union' 'EU project 101003551 - EXSCALATE4CoV (E4C)' 2 # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id PK8 _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id PK8 _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 '9-oxa-7-thia-1-azonia-8$l^{2}-zincabicyclo[4.3.0]nona-1,3,5-triene' PK8 3 IMIDAZOLE IMD 4 'DIMETHYL SULFOXIDE' DMS 5 'DI(HYDROXYETHYL)ETHER' PEG 6 'CHLORIDE ION' CL 7 water HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? # _space_group.name_H-M_alt 'C 1 2 1' _space_group.name_Hall 'C 2y' _space_group.IT_number 5 _space_group.crystal_system monoclinic _space_group.id 1 # loop_ _space_group_symop.id _space_group_symop.operation_xyz 1 x,y,z 2 -x,y,-z 3 x+1/2,y+1/2,z 4 -x+1/2,y+1/2,-z #