data_6YTC # _entry.id 6YTC # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.371 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6YTC pdb_00006ytc 10.2210/pdb6ytc/pdb WWPDB D_1292108241 ? ? BMRB 34514 ? ? # _pdbx_database_related.db_name BMRB _pdbx_database_related.details 'Solution NMR structure of the isolated NTE domain of BT1762-63 levan transporter' _pdbx_database_related.db_id 34514 _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.entry_id 6YTC _pdbx_database_status.recvd_initial_deposition_date 2020-04-24 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs REL _pdbx_database_status.status_code_nmr_data REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Rath, P.' 1 ? 'Mazur, A.' 2 ? 'Hiller, S.' 3 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nat Commun' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2041-1723 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 12 _citation.language ? _citation.page_first 44 _citation.page_last 44 _citation.title 'Insights into SusCD-mediated glycan import by a prominent gut symbiont.' _citation.year 2021 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41467-020-20285-y _citation.pdbx_database_id_PubMed 33398001 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Gray, D.A.' 1 ? primary 'White, J.B.R.' 2 ? primary 'Oluwole, A.O.' 3 0000-0001-8647-4781 primary 'Rath, P.' 4 ? primary 'Glenwright, A.J.' 5 0000-0002-2871-3278 primary 'Mazur, A.' 6 ? primary 'Zahn, M.' 7 ? primary 'Basle, A.' 8 ? primary 'Morland, C.' 9 ? primary 'Evans, S.L.' 10 ? primary 'Cartmell, A.' 11 0000-0002-5512-249X primary 'Robinson, C.V.' 12 0000-0001-7829-5505 primary 'Hiller, S.' 13 0000-0002-6709-4684 primary 'Ranson, N.A.' 14 0000-0002-3640-5275 primary 'Bolam, D.N.' 15 0000-0003-0314-3122 primary 'van den Berg, B.' 16 0000-0003-1966-8804 # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'TonB-dependent receptor' _entity.formula_weight 9947.120 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MGHHHHHHTKGNVTSKTDGQPIIGASVVETTATTNGTITDFDGNFTLSVPVNSTLKITYIGYKPVTVKAAAIVNVLLEED TQMVDEVVVTGYT ; _entity_poly.pdbx_seq_one_letter_code_can ;MGHHHHHHTKGNVTSKTDGQPIIGASVVETTATTNGTITDFDGNFTLSVPVNSTLKITYIGYKPVTVKAAAIVNVLLEED TQMVDEVVVTGYT ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLY n 1 3 HIS n 1 4 HIS n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 THR n 1 10 LYS n 1 11 GLY n 1 12 ASN n 1 13 VAL n 1 14 THR n 1 15 SER n 1 16 LYS n 1 17 THR n 1 18 ASP n 1 19 GLY n 1 20 GLN n 1 21 PRO n 1 22 ILE n 1 23 ILE n 1 24 GLY n 1 25 ALA n 1 26 SER n 1 27 VAL n 1 28 VAL n 1 29 GLU n 1 30 THR n 1 31 THR n 1 32 ALA n 1 33 THR n 1 34 THR n 1 35 ASN n 1 36 GLY n 1 37 THR n 1 38 ILE n 1 39 THR n 1 40 ASP n 1 41 PHE n 1 42 ASP n 1 43 GLY n 1 44 ASN n 1 45 PHE n 1 46 THR n 1 47 LEU n 1 48 SER n 1 49 VAL n 1 50 PRO n 1 51 VAL n 1 52 ASN n 1 53 SER n 1 54 THR n 1 55 LEU n 1 56 LYS n 1 57 ILE n 1 58 THR n 1 59 TYR n 1 60 ILE n 1 61 GLY n 1 62 TYR n 1 63 LYS n 1 64 PRO n 1 65 VAL n 1 66 THR n 1 67 VAL n 1 68 LYS n 1 69 ALA n 1 70 ALA n 1 71 ALA n 1 72 ILE n 1 73 VAL n 1 74 ASN n 1 75 VAL n 1 76 LEU n 1 77 LEU n 1 78 GLU n 1 79 GLU n 1 80 ASP n 1 81 THR n 1 82 GLN n 1 83 MET n 1 84 VAL n 1 85 ASP n 1 86 GLU n 1 87 VAL n 1 88 VAL n 1 89 VAL n 1 90 THR n 1 91 GLY n 1 92 TYR n 1 93 THR n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 93 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene HMPREF2534_01945 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Bacteroides thetaiotaomicron' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 818 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code A0A139KIX6_BACT4 _struct_ref.pdbx_db_accession A0A139KIX6 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;KGNVTSKTDGQPIIGASVVETTATTNGTITDFDGNFTLSVPVNSTLKITYIGYKPVTVKAAAIVNVLLEEDTQMVDEVVV TGYT ; _struct_ref.pdbx_align_begin 32 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 6YTC _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 10 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 93 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession A0A139KIX6 _struct_ref_seq.db_align_beg 32 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 115 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 7 _struct_ref_seq.pdbx_auth_seq_align_end 90 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 6YTC MET A 1 ? UNP A0A139KIX6 ? ? 'initiating methionine' -2 1 1 6YTC GLY A 2 ? UNP A0A139KIX6 ? ? 'expression tag' -1 2 1 6YTC HIS A 3 ? UNP A0A139KIX6 ? ? 'expression tag' 0 3 1 6YTC HIS A 4 ? UNP A0A139KIX6 ? ? 'expression tag' 1 4 1 6YTC HIS A 5 ? UNP A0A139KIX6 ? ? 'expression tag' 2 5 1 6YTC HIS A 6 ? UNP A0A139KIX6 ? ? 'expression tag' 3 6 1 6YTC HIS A 7 ? UNP A0A139KIX6 ? ? 'expression tag' 4 7 1 6YTC HIS A 8 ? UNP A0A139KIX6 ? ? 'expression tag' 5 8 1 6YTC THR A 9 ? UNP A0A139KIX6 ? ? 'expression tag' 6 9 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.spectrometer_id _pdbx_nmr_exptl.sample_state 1 1 1 '2D 1H-15N HSQC' 1 isotropic 7 1 1 '2D 1H-13C HSQC' 1 isotropic 2 1 1 '3D HNCA' 1 isotropic 3 1 1 '3D HNCACB' 1 isotropic 4 1 1 '3D CBCA(CO)NH' 1 isotropic 5 1 1 '3D 1H-15N NOESY' 1 isotropic 6 1 1 '3D 1H-13C NOESY aliphatic' 1 isotropic # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 293 _pdbx_nmr_exptl_sample_conditions.pressure_units atm _pdbx_nmr_exptl_sample_conditions.pressure 1 _pdbx_nmr_exptl_sample_conditions.pH 7.5 _pdbx_nmr_exptl_sample_conditions.ionic_strength 150 _pdbx_nmr_exptl_sample_conditions.details ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_err ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_units mM _pdbx_nmr_exptl_sample_conditions.label NTE_1 _pdbx_nmr_exptl_sample_conditions.pH_err ? _pdbx_nmr_exptl_sample_conditions.pH_units pH _pdbx_nmr_exptl_sample_conditions.pressure_err ? _pdbx_nmr_exptl_sample_conditions.temperature_err ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents ;1 mM U-15N, 13C-NTE Isolated NTE domain of BT1762-63 levan transporter, 1 mM U-15N, 13C-NTE Isolated NTE domain of BT1762-63 levan transporter_2, 1 mM U-15N, 13C-NTE Isolated NTE domain of BT1762-63 levan transporter_3, 1 mM U-15N, 13C-NTE Isolated NTE domain of BT1762-63 levan transporter_4, 1 mM U-15N, 13C-NTE Isolated NTE domain of BT1762-63 levan transporter_5, 95% H2O/5% D2O ; _pdbx_nmr_sample_details.solvent_system '95% H2O/5% D2O' _pdbx_nmr_sample_details.label 'U-15N, 13C-NTE' _pdbx_nmr_sample_details.type solution _pdbx_nmr_sample_details.details 'NMR Buffer:20 mM sodium phosphate, 150 mM NaCl and pH 7.5.' # loop_ _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.type _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.details 1 AVANCE ? Bruker 700 ? 2 AVANCE ? Bruker 700 ? # _pdbx_nmr_refine.entry_id 6YTC _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 6YTC _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.representative_conformer ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 6YTC _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.ordinal _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors 1 refinement CYANA ? 'Guntert P.' 2 'structure calculation' CYANA ? 'Guntert, Mumenthaler and Wuthrich' 3 'chemical shift assignment' CARA ? 'Keller and Wuthrich' 4 'peak picking' CYANA ? 'Guntert, Mumenthaler and Wuthrich' # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6YTC _exptl.crystals_number ? _exptl.details ? _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 6YTC _struct.title 'Solution NMR structure of the isolated NTE domain of BT1762-63 levan transporter' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6YTC _struct_keywords.text 'Glycan import, Transporter, N-terminal Domain, Ig-like fold, PROTEIN TRANSPORT' _struct_keywords.pdbx_keywords 'PROTEIN TRANSPORT' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 2 ? AA2 ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ASN A 12 ? SER A 15 ? ASN A 9 SER A 12 AA1 2 ASN A 74 ? LEU A 77 ? ASN A 71 LEU A 74 AA2 1 THR A 37 ? ILE A 38 ? THR A 34 ILE A 35 AA2 2 SER A 26 ? GLU A 29 ? SER A 23 GLU A 26 AA2 3 THR A 54 ? THR A 58 ? THR A 51 THR A 55 AA2 4 VAL A 65 ? LYS A 68 ? VAL A 62 LYS A 65 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N ASN A 12 ? N ASN A 9 O VAL A 75 ? O VAL A 72 AA2 1 2 O THR A 37 ? O THR A 34 N VAL A 27 ? N VAL A 24 AA2 2 3 N VAL A 28 ? N VAL A 25 O LYS A 56 ? O LYS A 53 AA2 3 4 N ILE A 57 ? N ILE A 54 O VAL A 65 ? O VAL A 62 # _atom_sites.entry_id 6YTC _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -2 -2 MET MET A . n A 1 2 GLY 2 -1 -1 GLY GLY A . n A 1 3 HIS 3 0 0 HIS HIS A . n A 1 4 HIS 4 1 1 HIS HIS A . n A 1 5 HIS 5 2 2 HIS HIS A . n A 1 6 HIS 6 3 3 HIS HIS A . n A 1 7 HIS 7 4 4 HIS HIS A . n A 1 8 HIS 8 5 5 HIS HIS A . n A 1 9 THR 9 6 6 THR THR A . n A 1 10 LYS 10 7 7 LYS LYS A . n A 1 11 GLY 11 8 8 GLY GLY A . n A 1 12 ASN 12 9 9 ASN ASN A . n A 1 13 VAL 13 10 10 VAL VAL A . n A 1 14 THR 14 11 11 THR THR A . n A 1 15 SER 15 12 12 SER SER A . n A 1 16 LYS 16 13 13 LYS LYS A . n A 1 17 THR 17 14 14 THR THR A . n A 1 18 ASP 18 15 15 ASP ASP A . n A 1 19 GLY 19 16 16 GLY GLY A . n A 1 20 GLN 20 17 17 GLN GLN A . n A 1 21 PRO 21 18 18 PRO PRO A . n A 1 22 ILE 22 19 19 ILE ILE A . n A 1 23 ILE 23 20 20 ILE ILE A . n A 1 24 GLY 24 21 21 GLY GLY A . n A 1 25 ALA 25 22 22 ALA ALA A . n A 1 26 SER 26 23 23 SER SER A . n A 1 27 VAL 27 24 24 VAL VAL A . n A 1 28 VAL 28 25 25 VAL VAL A . n A 1 29 GLU 29 26 26 GLU GLU A . n A 1 30 THR 30 27 27 THR THR A . n A 1 31 THR 31 28 28 THR THR A . n A 1 32 ALA 32 29 29 ALA ALA A . n A 1 33 THR 33 30 30 THR THR A . n A 1 34 THR 34 31 31 THR THR A . n A 1 35 ASN 35 32 32 ASN ASN A . n A 1 36 GLY 36 33 33 GLY GLY A . n A 1 37 THR 37 34 34 THR THR A . n A 1 38 ILE 38 35 35 ILE ILE A . n A 1 39 THR 39 36 36 THR THR A . n A 1 40 ASP 40 37 37 ASP ASP A . n A 1 41 PHE 41 38 38 PHE PHE A . n A 1 42 ASP 42 39 39 ASP ASP A . n A 1 43 GLY 43 40 40 GLY GLY A . n A 1 44 ASN 44 41 41 ASN ASN A . n A 1 45 PHE 45 42 42 PHE PHE A . n A 1 46 THR 46 43 43 THR THR A . n A 1 47 LEU 47 44 44 LEU LEU A . n A 1 48 SER 48 45 45 SER SER A . n A 1 49 VAL 49 46 46 VAL VAL A . n A 1 50 PRO 50 47 47 PRO PRO A . n A 1 51 VAL 51 48 48 VAL VAL A . n A 1 52 ASN 52 49 49 ASN ASN A . n A 1 53 SER 53 50 50 SER SER A . n A 1 54 THR 54 51 51 THR THR A . n A 1 55 LEU 55 52 52 LEU LEU A . n A 1 56 LYS 56 53 53 LYS LYS A . n A 1 57 ILE 57 54 54 ILE ILE A . n A 1 58 THR 58 55 55 THR THR A . n A 1 59 TYR 59 56 56 TYR TYR A . n A 1 60 ILE 60 57 57 ILE ILE A . n A 1 61 GLY 61 58 58 GLY GLY A . n A 1 62 TYR 62 59 59 TYR TYR A . n A 1 63 LYS 63 60 60 LYS LYS A . n A 1 64 PRO 64 61 61 PRO PRO A . n A 1 65 VAL 65 62 62 VAL VAL A . n A 1 66 THR 66 63 63 THR THR A . n A 1 67 VAL 67 64 64 VAL VAL A . n A 1 68 LYS 68 65 65 LYS LYS A . n A 1 69 ALA 69 66 66 ALA ALA A . n A 1 70 ALA 70 67 67 ALA ALA A . n A 1 71 ALA 71 68 68 ALA ALA A . n A 1 72 ILE 72 69 69 ILE ILE A . n A 1 73 VAL 73 70 70 VAL VAL A . n A 1 74 ASN 74 71 71 ASN ASN A . n A 1 75 VAL 75 72 72 VAL VAL A . n A 1 76 LEU 76 73 73 LEU LEU A . n A 1 77 LEU 77 74 74 LEU LEU A . n A 1 78 GLU 78 75 75 GLU GLU A . n A 1 79 GLU 79 76 76 GLU GLU A . n A 1 80 ASP 80 77 77 ASP ASP A . n A 1 81 THR 81 78 78 THR THR A . n A 1 82 GLN 82 79 79 GLN GLN A . n A 1 83 MET 83 80 80 MET MET A . n A 1 84 VAL 84 81 81 VAL VAL A . n A 1 85 ASP 85 82 82 ASP ASP A . n A 1 86 GLU 86 83 83 GLU GLU A . n A 1 87 VAL 87 84 84 VAL VAL A . n A 1 88 VAL 88 85 85 VAL VAL A . n A 1 89 VAL 89 86 86 VAL VAL A . n A 1 90 THR 90 87 87 THR THR A . n A 1 91 GLY 91 88 88 GLY GLY A . n A 1 92 TYR 92 89 89 TYR TYR A . n A 1 93 THR 93 90 90 THR THR A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 0 ? 1 MORE 0 ? 1 'SSA (A^2)' 7600 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2020-07-08 2 'Structure model' 1 1 2021-01-20 3 'Structure model' 1 2 2023-06-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 3 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_database_status # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_CSD' 4 2 'Structure model' '_citation.journal_id_ISSN' 5 2 'Structure model' '_citation.journal_volume' 6 2 'Structure model' '_citation.page_first' 7 2 'Structure model' '_citation.page_last' 8 2 'Structure model' '_citation.pdbx_database_id_DOI' 9 2 'Structure model' '_citation.pdbx_database_id_PubMed' 10 2 'Structure model' '_citation.title' 11 2 'Structure model' '_citation.year' 12 3 'Structure model' '_database_2.pdbx_DOI' 13 3 'Structure model' '_database_2.pdbx_database_accession' 14 3 'Structure model' '_pdbx_database_status.status_code_nmr_data' # loop_ _pdbx_nmr_exptl_sample.solution_id _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling 1 'Isolated NTE domain of BT1762-63 levan transporter' 1 ? mM 'U-15N, 13C-NTE' 1 'Isolated NTE domain of BT1762-63 levan transporter_2' 1 ? mM 'U-15N, 13C-NTE' 1 'Isolated NTE domain of BT1762-63 levan transporter_3' 1 ? mM 'U-15N, 13C-NTE' 1 'Isolated NTE domain of BT1762-63 levan transporter_4' 1 ? mM 'U-15N, 13C-NTE' 1 'Isolated NTE domain of BT1762-63 levan transporter_5' 1 ? mM 'U-15N, 13C-NTE' # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA A 29 ? ? -101.32 65.65 2 1 ASN A 32 ? ? -94.45 31.41 3 1 GLU A 83 ? ? -109.14 66.80 4 2 ALA A 29 ? ? -161.51 110.69 5 2 ASN A 32 ? ? -94.26 31.19 6 2 ASN A 49 ? ? -106.55 58.89 7 2 ASP A 77 ? ? -96.41 36.15 8 2 MET A 80 ? ? -108.09 79.66 9 2 GLU A 83 ? ? -119.50 61.78 10 3 ASN A 32 ? ? -93.13 30.74 11 3 GLN A 79 ? ? -54.94 173.31 12 3 MET A 80 ? ? -55.76 171.24 13 3 ASP A 82 ? ? -97.96 36.43 14 4 HIS A 0 ? ? -171.05 140.73 15 4 LYS A 7 ? ? -58.83 -173.37 16 4 ALA A 29 ? ? -117.20 77.20 17 4 ASN A 32 ? ? -94.76 31.30 18 4 SER A 50 ? ? -68.53 -169.78 19 4 VAL A 81 ? ? -108.41 67.65 20 5 ALA A 29 ? ? -100.77 75.50 21 5 ASN A 32 ? ? -94.46 31.20 22 5 SER A 50 ? ? -72.84 -169.83 23 6 ALA A 29 ? ? -178.64 134.61 24 6 ASN A 32 ? ? -93.20 31.24 25 6 ILE A 57 ? ? -50.94 107.93 26 6 ASP A 77 ? ? -110.89 69.77 27 6 VAL A 81 ? ? -171.63 133.78 28 6 GLU A 83 ? ? -116.39 67.68 29 7 ALA A 29 ? ? -166.52 111.49 30 7 ASN A 32 ? ? -93.51 31.22 31 7 ILE A 57 ? ? -51.00 107.75 32 8 LYS A 7 ? ? -66.34 91.37 33 8 ALA A 29 ? ? -116.18 68.84 34 8 ASN A 32 ? ? -94.95 31.16 35 8 ASN A 49 ? ? -111.64 62.38 36 8 THR A 78 ? ? -101.59 45.74 37 9 LYS A 7 ? ? -60.35 -171.64 38 9 ALA A 29 ? ? -112.81 68.67 39 9 ASN A 32 ? ? -94.90 31.16 40 9 ASN A 49 ? ? -100.35 72.25 41 9 ALA A 66 ? ? -60.84 95.89 42 9 MET A 80 ? ? -57.44 170.47 43 10 ALA A 29 ? ? -104.89 76.44 44 10 ASN A 32 ? ? -94.45 31.42 45 10 SER A 50 ? ? -100.55 -169.29 46 10 VAL A 81 ? ? -106.79 56.46 47 11 HIS A 4 ? ? -169.21 111.78 48 11 ALA A 29 ? ? -160.45 103.34 49 11 ASN A 32 ? ? -93.41 31.42 50 11 VAL A 48 ? ? -93.18 53.69 51 11 ASN A 49 ? ? -154.79 35.38 52 12 ALA A 29 ? ? -118.75 78.83 53 12 ASN A 32 ? ? -94.61 31.14 54 12 ASN A 49 ? ? -106.04 64.99 55 12 VAL A 86 ? ? -175.18 142.32 56 13 ASN A 32 ? ? -93.96 31.51 57 13 ASN A 49 ? ? -107.13 45.66 58 13 SER A 50 ? ? -57.43 -179.55 59 13 ASP A 82 ? ? -65.19 -179.65 60 13 VAL A 84 ? ? -104.94 69.54 61 13 VAL A 86 ? ? 54.40 80.38 62 14 ALA A 29 ? ? -160.76 104.74 63 14 ASN A 32 ? ? -94.29 31.34 64 14 SER A 50 ? ? -63.91 -169.90 65 14 PRO A 61 ? ? -69.79 -179.15 66 14 ALA A 66 ? ? -55.58 105.14 67 14 GLU A 83 ? ? 39.46 41.71 68 14 VAL A 86 ? ? -57.77 -178.74 69 15 HIS A 5 ? ? -103.84 57.68 70 15 ALA A 29 ? ? -164.76 78.78 71 15 ASN A 32 ? ? -93.47 30.59 72 15 ASN A 49 ? ? -104.21 79.70 73 15 SER A 50 ? ? -89.37 -76.96 74 15 THR A 78 ? ? -103.76 66.68 75 15 GLU A 83 ? ? -118.54 65.89 76 16 HIS A 5 ? ? -122.75 -64.56 77 16 ALA A 29 ? ? -110.26 76.63 78 16 ASN A 32 ? ? -93.16 30.99 79 16 SER A 50 ? ? -61.98 -172.59 80 16 VAL A 81 ? ? -175.36 134.37 81 16 THR A 87 ? ? -64.02 -179.54 82 17 ASN A 32 ? ? -93.51 30.55 83 17 ILE A 57 ? ? -50.91 107.68 84 18 HIS A 5 ? ? -139.32 -55.18 85 18 ALA A 29 ? ? -114.97 75.56 86 18 ASN A 32 ? ? -94.54 31.23 87 18 VAL A 48 ? ? -95.48 31.99 88 18 PRO A 61 ? ? -69.81 -178.75 89 19 HIS A 5 ? ? -118.43 61.20 90 19 ASN A 32 ? ? -93.25 31.08 91 19 ASN A 49 ? ? -91.30 46.07 92 19 SER A 50 ? ? -66.40 -169.83 93 19 ALA A 66 ? ? -61.18 98.34 94 19 VAL A 81 ? ? -113.86 67.62 95 19 GLU A 83 ? ? -153.98 43.74 96 19 VAL A 84 ? ? 50.78 87.33 97 20 ALA A 29 ? ? -103.16 64.55 98 20 ASN A 32 ? ? -93.78 31.33 99 20 SER A 50 ? ? -109.39 -169.41 100 20 GLN A 79 ? ? -90.20 47.89 101 20 GLU A 83 ? ? -103.09 68.66 # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? #