HEADER FLUORESCENT PROTEIN 30-APR-20 6YX6 TITLE STRUCTURE OF CHLOROFLEXUS AGGREGANS FLAVIN BASED FLUORESCENT PROTEIN TITLE 2 (CAGFBFP) Q148K VARIANT (NO MORPHOLINE) COMPND MOL_ID: 1; COMPND 2 MOLECULE: MULTI-SENSOR HYBRID HISTIDINE KINASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CHLOROFLEXUS AGGREGANS (STRAIN MD-66 / DSM SOURCE 3 9485); SOURCE 4 ORGANISM_TAXID: 326427; SOURCE 5 STRAIN: MD-66 / DSM 9485; SOURCE 6 GENE: CAGG_3753; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS LOV DOMAIN, FLUORESCENT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.REMEEVA,V.NAZARENKO,K.KOVALEV,I.GUSHCHIN REVDAT 4 24-JAN-24 6YX6 1 JRNL REVDAT 3 21-JUL-21 6YX6 1 JRNL REVDAT 2 28-APR-21 6YX6 1 JRNL REVDAT 1 21-APR-21 6YX6 0 JRNL AUTH K.ROLLEN,J.GRANZIN,A.REMEEVA,M.D.DAVARI,T.GENSCH, JRNL AUTH 2 V.V.NAZARENKO,K.KOVALEV,A.BOGORODSKIY,V.BORSHCHEVSKIY, JRNL AUTH 3 S.HEMMER,U.SCHWANEBERG,V.GORDELIY,K.E.JAEGER, JRNL AUTH 4 R.BATRA-SAFFERLING,I.GUSHCHIN,U.KRAUSS JRNL TITL THE MOLECULAR BASIS OF SPECTRAL TUNING IN BLUE- AND JRNL TITL 2 RED-SHIFTED FLAVIN-BINDING FLUORESCENT PROTEINS. JRNL REF J.BIOL.CHEM. V. 296 00662 2021 JRNL REFN ESSN 1083-351X JRNL PMID 33862085 JRNL DOI 10.1016/J.JBC.2021.100662 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH A.REMEEVA,V.V.NAZARENKO,K.KOVALEV,I.M.GONCHAROV,A.YUDENKO, REMARK 1 AUTH 2 R.ASTASHKIN,V.GORDELIY,I.GUSHCHIN REMARK 1 TITL INSIGHTS INTO THE MECHANISMS OF LIGHT-OXYGEN-VOLTAGE DOMAIN REMARK 1 TITL 2 COLOR TUNING FROM A SET OF HIGH-RESOLUTION X-RAY STRUCTURES. REMARK 1 REF PROTEINS 2021 REMARK 1 REFN ESSN 1097-0134 REMARK 1 PMID 33774867 REMARK 1 DOI 10.1002/PROT.26078 REMARK 1 REFERENCE 2 REMARK 1 AUTH A.REMEEVA,V.V.NAZARENKO,K.KOVALEV,I.GONCHAROV,A.YUDENKO, REMARK 1 AUTH 2 R.ASTASHKIN,V.GORDELIY,I.GUSHCHIN REMARK 1 TITL INSIGHTS INTO THE MECHANISMS OF LOV DOMAIN COLOR TUNING FROM REMARK 1 TITL 2 A SET OF HIGH-RESOLUTION X-RAY STRUCTURES REMARK 1 REF BIORXIV 2021 REMARK 1 REFN ISSN 2692-8205 REMARK 1 DOI 10.1101/2021.02.05.429969 REMARK 1 REFERENCE 3 REMARK 1 AUTH K.ROLLEN,J.GRANZIN,A.REMEEVA,M.D.DAVARI,T.GENSCH, REMARK 1 AUTH 2 V.V.NAZARENKO,K.KOVALEV,A.BOGORODSKIY,V.BORSHCHEVSKIY, REMARK 1 AUTH 3 S.HEMMER,U.SCHWANEBERG,V.GORDELIY,K.E.JAEGER, REMARK 1 AUTH 4 R.BATRA-SAFFERLING,I.GUSHCHIN,U.KRAUSS REMARK 1 TITL STRUCTURAL AND MECHANISTIC INSIGHT INTO SPECTRAL TUNING IN REMARK 1 TITL 2 FLAVIN-BINDING FLUORESCENT PROTEINS REMARK 1 REF BIORXIV 2021 REMARK 1 REFN ISSN 2692-8205 REMARK 1 DOI 10.1101/2021.01.08.425906 REMARK 2 REMARK 2 RESOLUTION. 1.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0238 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.90 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 87.1 REMARK 3 NUMBER OF REFLECTIONS : 34107 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.175 REMARK 3 R VALUE (WORKING SET) : 0.174 REMARK 3 FREE R VALUE : 0.202 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 1756 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.54 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1730 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 61.09 REMARK 3 BIN R VALUE (WORKING SET) : 0.2410 REMARK 3 BIN FREE R VALUE SET COUNT : 102 REMARK 3 BIN FREE R VALUE : 0.2680 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1589 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 72 REMARK 3 SOLVENT ATOMS : 346 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 14.36 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.19000 REMARK 3 B22 (A**2) : 0.03000 REMARK 3 B33 (A**2) : 0.16000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.079 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.079 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.050 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.367 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.961 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.950 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1759 ; 0.005 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 1609 ; 0.000 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2426 ; 1.329 ; 1.707 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3725 ; 1.301 ; 1.601 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 230 ; 6.630 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 97 ;31.461 ;21.753 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 257 ;10.910 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 16 ;12.459 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 240 ; 0.051 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1998 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 370 ; 0.000 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 6YX6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 30-APR-20. REMARK 100 THE DEPOSITION ID IS D_1292108445. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-FEB-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9737 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.4 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 35712 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.500 REMARK 200 RESOLUTION RANGE LOW (A) : 39.993 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 86.6 REMARK 200 DATA REDUNDANCY : 5.600 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.54 REMARK 200 COMPLETENESS FOR SHELL (%) : 59.9 REMARK 200 DATA REDUNDANCY IN SHELL : 5.60 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 6YX4 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.38 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.53 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.5M AMMONIUM SULFATE, 0.1M TRI-SODIUM REMARK 280 CITRATE, PH 6.5, 1M LITHIUM SULFATE, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 28.88600 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 55.41950 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 28.88600 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 55.41950 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3550 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10200 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -47.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B 450 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 47 REMARK 465 ALA A 153 REMARK 465 HIS A 154 REMARK 465 HIS A 155 REMARK 465 HIS A 156 REMARK 465 HIS A 157 REMARK 465 HIS A 158 REMARK 465 HIS A 159 REMARK 465 MET B 47 REMARK 465 ALA B 153 REMARK 465 HIS B 154 REMARK 465 HIS B 155 REMARK 465 HIS B 156 REMARK 465 HIS B 157 REMARK 465 HIS B 158 REMARK 465 HIS B 159 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 67 NE CZ NH1 NH2 REMARK 470 ARG B 67 NE CZ NH1 NH2 REMARK 470 ARG B 119 CZ NH1 NH2 REMARK 470 THR B 152 OG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 389 O HOH A 454 1.93 REMARK 500 ND2 ASN B 78 O HOH B 301 1.97 REMARK 500 ND2 ASN B 78 O HOH B 302 2.07 REMARK 500 O HOH B 392 O HOH B 400 2.08 REMARK 500 NE2 GLN A 123 O HOH A 301 2.08 REMARK 500 OE2 GLU B 103 O HOH B 303 2.12 REMARK 500 NH1 ARG B 102 O HOH B 304 2.14 REMARK 500 CD ARG A 109 O HOH A 421 2.14 REMARK 500 O HOH A 473 O HOH A 477 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 445 O HOH B 418 1554 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 58 -122.83 48.76 REMARK 500 ALA B 58 -121.07 49.94 REMARK 500 VAL B 151 47.31 -93.44 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 489 DISTANCE = 6.75 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMN A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMN B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 202 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6RHF RELATED DB: PDB DBREF 6YX6 A 47 153 UNP B8GAY9 B8GAY9_CHLAD 47 153 DBREF 6YX6 B 47 153 UNP B8GAY9 B8GAY9_CHLAD 47 153 SEQADV 6YX6 ALA A 85 UNP B8GAY9 CYS 85 ENGINEERED MUTATION SEQADV 6YX6 LYS A 148 UNP B8GAY9 GLN 148 ENGINEERED MUTATION SEQADV 6YX6 HIS A 154 UNP B8GAY9 EXPRESSION TAG SEQADV 6YX6 HIS A 155 UNP B8GAY9 EXPRESSION TAG SEQADV 6YX6 HIS A 156 UNP B8GAY9 EXPRESSION TAG SEQADV 6YX6 HIS A 157 UNP B8GAY9 EXPRESSION TAG SEQADV 6YX6 HIS A 158 UNP B8GAY9 EXPRESSION TAG SEQADV 6YX6 HIS A 159 UNP B8GAY9 EXPRESSION TAG SEQADV 6YX6 ALA B 85 UNP B8GAY9 CYS 85 ENGINEERED MUTATION SEQADV 6YX6 LYS B 148 UNP B8GAY9 GLN 148 ENGINEERED MUTATION SEQADV 6YX6 HIS B 154 UNP B8GAY9 EXPRESSION TAG SEQADV 6YX6 HIS B 155 UNP B8GAY9 EXPRESSION TAG SEQADV 6YX6 HIS B 156 UNP B8GAY9 EXPRESSION TAG SEQADV 6YX6 HIS B 157 UNP B8GAY9 EXPRESSION TAG SEQADV 6YX6 HIS B 158 UNP B8GAY9 EXPRESSION TAG SEQADV 6YX6 HIS B 159 UNP B8GAY9 EXPRESSION TAG SEQRES 1 A 113 MET ALA SER GLY MET ILE VAL THR ASP ALA GLY ALA ASP SEQRES 2 A 113 GLN PRO ILE VAL PHE VAL ASN ARG ALA PHE SER THR ILE SEQRES 3 A 113 THR GLY TYR ALA PRO ASN GLU VAL LEU GLY ARG ASN ALA SEQRES 4 A 113 ARG PHE LEU GLN GLY PRO GLN THR ASP ALA ALA THR VAL SEQRES 5 A 113 ALA ARG LEU ARG GLU ALA ILE ALA ALA ALA ARG PRO ILE SEQRES 6 A 113 GLN GLU ARG ILE LEU ASN TYR ARG LYS ASP GLY GLN PRO SEQRES 7 A 113 PHE TRP ASN GLN LEU SER ILE SER PRO VAL ARG ASP GLU SEQRES 8 A 113 THR GLY ASN VAL VAL ALA PHE VAL GLY VAL LYS THR ASP SEQRES 9 A 113 VAL THR ALA HIS HIS HIS HIS HIS HIS SEQRES 1 B 113 MET ALA SER GLY MET ILE VAL THR ASP ALA GLY ALA ASP SEQRES 2 B 113 GLN PRO ILE VAL PHE VAL ASN ARG ALA PHE SER THR ILE SEQRES 3 B 113 THR GLY TYR ALA PRO ASN GLU VAL LEU GLY ARG ASN ALA SEQRES 4 B 113 ARG PHE LEU GLN GLY PRO GLN THR ASP ALA ALA THR VAL SEQRES 5 B 113 ALA ARG LEU ARG GLU ALA ILE ALA ALA ALA ARG PRO ILE SEQRES 6 B 113 GLN GLU ARG ILE LEU ASN TYR ARG LYS ASP GLY GLN PRO SEQRES 7 B 113 PHE TRP ASN GLN LEU SER ILE SER PRO VAL ARG ASP GLU SEQRES 8 B 113 THR GLY ASN VAL VAL ALA PHE VAL GLY VAL LYS THR ASP SEQRES 9 B 113 VAL THR ALA HIS HIS HIS HIS HIS HIS HET FMN A 201 31 HET SO4 A 202 5 HET FMN B 201 31 HET SO4 B 202 5 HETNAM FMN FLAVIN MONONUCLEOTIDE HETNAM SO4 SULFATE ION HETSYN FMN RIBOFLAVIN MONOPHOSPHATE FORMUL 3 FMN 2(C17 H21 N4 O9 P) FORMUL 4 SO4 2(O4 S 2-) FORMUL 7 HOH *346(H2 O) HELIX 1 AA1 ASN A 66 GLY A 74 1 9 HELIX 2 AA2 ALA A 76 LEU A 81 1 6 HELIX 3 AA3 ASN A 84 GLN A 89 5 6 HELIX 4 AA4 ASP A 94 ALA A 108 1 15 HELIX 5 AA5 ASN B 66 GLY B 74 1 9 HELIX 6 AA6 ALA B 76 LEU B 81 1 6 HELIX 7 AA7 ASN B 84 GLN B 89 5 6 HELIX 8 AA8 ASP B 94 ALA B 108 1 15 SHEET 1 AA1 5 ILE A 62 VAL A 65 0 SHEET 2 AA1 5 GLY A 50 ASP A 55 -1 N VAL A 53 O PHE A 64 SHEET 3 AA1 5 VAL A 141 LYS A 148 -1 O GLY A 146 N ILE A 52 SHEET 4 AA1 5 PRO A 124 ARG A 135 -1 N VAL A 134 O VAL A 142 SHEET 5 AA1 5 ILE A 111 TYR A 118 -1 N ASN A 117 O PHE A 125 SHEET 1 AA2 5 ILE B 62 VAL B 65 0 SHEET 2 AA2 5 GLY B 50 THR B 54 -1 N VAL B 53 O PHE B 64 SHEET 3 AA2 5 VAL B 141 LYS B 148 -1 O GLY B 146 N ILE B 52 SHEET 4 AA2 5 PRO B 124 ARG B 135 -1 N VAL B 134 O VAL B 142 SHEET 5 AA2 5 ILE B 111 TYR B 118 -1 N ASN B 117 O PHE B 125 SITE 1 AC1 23 ILE A 52 THR A 54 ASN A 84 ALA A 85 SITE 2 AC1 23 ARG A 86 LEU A 88 GLN A 89 VAL A 98 SITE 3 AC1 23 ARG A 102 ILE A 105 ILE A 115 ASN A 117 SITE 4 AC1 23 ASN A 127 LEU A 129 ILE A 131 PHE A 144 SITE 5 AC1 23 GLY A 146 HOH A 318 HOH A 323 HOH A 365 SITE 6 AC1 23 HOH A 405 ALA B 58 HOH B 331 SITE 1 AC2 4 TYR A 75 ARG A 83 HOH A 304 HOH A 342 SITE 1 AC3 21 ALA A 58 ILE B 52 THR B 54 ASN B 84 SITE 2 AC3 21 ALA B 85 ARG B 86 LEU B 88 GLN B 89 SITE 3 AC3 21 VAL B 98 ARG B 102 ILE B 105 ILE B 115 SITE 4 AC3 21 ASN B 117 ASN B 127 LEU B 129 ILE B 131 SITE 5 AC3 21 PHE B 144 GLY B 146 HOH B 315 HOH B 318 SITE 6 AC3 21 HOH B 370 SITE 1 AC4 4 TYR B 75 ARG B 83 HOH B 305 HOH B 317 CRYST1 57.772 110.839 39.197 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017309 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009022 0.000000 0.00000 SCALE3 0.000000 0.000000 0.025512 0.00000