HEADER ANTIVIRAL PROTEIN 01-MAY-20 6YXE TITLE STRUCTURE OF THE TRIM69 RING DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: E3 UBIQUITIN-PROTEIN LIGASE TRIM69; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: RFP-LIKE DOMAIN-CONTAINING PROTEIN TRIMLESS,RING FINGER COMPND 5 PROTEIN 36,RING-TYPE E3 UBIQUITIN TRANSFERASE TRIM69,TRIPARTITE COMPND 6 MOTIF-CONTAINING PROTEIN 69; COMPND 7 EC: 2.3.2.27; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: TRIM69, RNF36, HSD-34, HSD34; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS TRIM69, TRIPARTITE MOTIF, TRIM PROTEIN, ANTIVIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.R.KEOWN,D.C.GOLDSTONE REVDAT 2 09-DEC-20 6YXE 1 JRNL REVDAT 1 14-OCT-20 6YXE 0 JRNL AUTH J.R.KEOWN,J.YANG,M.M.BLACK,D.C.GOLDSTONE JRNL TITL THE RING DOMAIN OF TRIM69 PROMOTES HIGHER-ORDER ASSEMBLY. JRNL REF ACTA CRYSTALLOGR D STRUCT V. 76 954 2020 JRNL REF 2 BIOL JRNL REFN ISSN 2059-7983 JRNL PMID 33021497 JRNL DOI 10.1107/S2059798320010499 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.0.32 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 65.46 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 11743 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.200 REMARK 3 R VALUE (WORKING SET) : 0.198 REMARK 3 FREE R VALUE : 0.240 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.200 REMARK 3 FREE R VALUE TEST SET COUNT : 643 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.10 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.16 REMARK 3 REFLECTION IN BIN (WORKING SET) : 865 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.3150 REMARK 3 BIN FREE R VALUE SET COUNT : 44 REMARK 3 BIN FREE R VALUE : 0.3290 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1289 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 4 REMARK 3 SOLVENT ATOMS : 30 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 52.32 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.44000 REMARK 3 B22 (A**2) : -0.44000 REMARK 3 B33 (A**2) : 1.44000 REMARK 3 B12 (A**2) : -0.22000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.192 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.172 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.142 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 11.518 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.957 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.937 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1331 ; 0.013 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 1189 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1808 ; 1.570 ; 1.959 REMARK 3 BOND ANGLES OTHERS (DEGREES): 2788 ; 1.014 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 161 ; 6.207 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 60 ;41.432 ;25.833 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 233 ;16.813 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 2 ; 2.564 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 201 ; 0.093 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1455 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 251 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 1 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 33 103 B 33 103 4184 0.080 0.050 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 3 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 21 A 110 REMARK 3 RESIDUE RANGE : C 1 C 1 REMARK 3 RESIDUE RANGE : C 2 C 2 REMARK 3 ORIGIN FOR THE GROUP (A): 23.6280 23.8600 27.4020 REMARK 3 T TENSOR REMARK 3 T11: 0.1370 T22: 0.2903 REMARK 3 T33: 0.0127 T12: -0.0021 REMARK 3 T13: -0.0111 T23: -0.0174 REMARK 3 L TENSOR REMARK 3 L11: 5.6640 L22: 3.4729 REMARK 3 L33: 3.9748 L12: 2.6212 REMARK 3 L13: 2.4050 L23: 1.6419 REMARK 3 S TENSOR REMARK 3 S11: 0.1077 S12: -0.3684 S13: -0.1152 REMARK 3 S21: 0.1863 S22: -0.0060 S23: 0.0042 REMARK 3 S31: 0.4753 S32: -0.4838 S33: -0.1017 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 3 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 33 B 104 REMARK 3 RESIDUE RANGE : C 3 C 3 REMARK 3 RESIDUE RANGE : C 4 C 4 REMARK 3 ORIGIN FOR THE GROUP (A): 22.9950 0.5600 10.0170 REMARK 3 T TENSOR REMARK 3 T11: 0.2480 T22: 0.3104 REMARK 3 T33: 0.1269 T12: 0.0219 REMARK 3 T13: -0.0456 T23: 0.0442 REMARK 3 L TENSOR REMARK 3 L11: 3.4825 L22: 7.1782 REMARK 3 L33: 8.3147 L12: -0.0104 REMARK 3 L13: 0.2650 L23: 1.0599 REMARK 3 S TENSOR REMARK 3 S11: -0.1085 S12: -0.2954 S13: -0.3107 REMARK 3 S21: 0.1556 S22: 0.1255 S23: -0.2308 REMARK 3 S31: 0.5165 S32: 1.1529 S33: -0.0170 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 6YXE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 01-MAY-20. REMARK 100 THE DEPOSITION ID IS D_1292108452. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-SEP-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.2524 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.5.15 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12387 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 65.460 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 21.50 REMARK 200 R MERGE (I) : 0.11100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 27.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.16 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 15.30 REMARK 200 R MERGE FOR SHELL (I) : 2.14500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXDE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: HEXAGONAL PLATES REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.03 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.26 M NH4SO4, 0.2 M LISO4, AND 0.1 M REMARK 280 TRIS PH 8.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 54.98250 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 31.74416 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 30.04500 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 54.98250 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 31.74416 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 30.04500 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 54.98250 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 31.74416 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 30.04500 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 54.98250 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 31.74416 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 30.04500 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 54.98250 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 31.74416 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 30.04500 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 54.98250 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 31.74416 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 30.04500 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 63.48832 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 60.09000 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 63.48832 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 60.09000 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 63.48832 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 60.09000 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 63.48832 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 60.09000 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 63.48832 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 60.09000 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 63.48832 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 60.09000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2520 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10360 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -25.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 63.48832 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 60.09000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1310 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8630 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -15.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 SER A -11 REMARK 465 ALA A -10 REMARK 465 ALA A -9 REMARK 465 LEU A -8 REMARK 465 GLU A -7 REMARK 465 VAL A -6 REMARK 465 LEU A -5 REMARK 465 PHE A -4 REMARK 465 GLN A -3 REMARK 465 GLY A -2 REMARK 465 PRO A -1 REMARK 465 GLY A 0 REMARK 465 MET A 1 REMARK 465 GLU A 2 REMARK 465 VAL A 3 REMARK 465 SER A 4 REMARK 465 THR A 5 REMARK 465 ASN A 6 REMARK 465 PRO A 7 REMARK 465 SER A 8 REMARK 465 SER A 9 REMARK 465 ASN A 10 REMARK 465 ILE A 11 REMARK 465 ASP A 12 REMARK 465 PRO A 13 REMARK 465 GLY A 14 REMARK 465 ASP A 15 REMARK 465 TYR A 16 REMARK 465 VAL A 17 REMARK 465 GLU A 18 REMARK 465 MET A 19 REMARK 465 ASN A 20 REMARK 465 ASP A 21 REMARK 465 HIS B -17 REMARK 465 HIS B -16 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 HIS B -12 REMARK 465 SER B -11 REMARK 465 ALA B -10 REMARK 465 ALA B -9 REMARK 465 LEU B -8 REMARK 465 GLU B -7 REMARK 465 VAL B -6 REMARK 465 LEU B -5 REMARK 465 PHE B -4 REMARK 465 GLN B -3 REMARK 465 GLY B -2 REMARK 465 PRO B -1 REMARK 465 GLY B 0 REMARK 465 MET B 1 REMARK 465 GLU B 2 REMARK 465 VAL B 3 REMARK 465 SER B 4 REMARK 465 THR B 5 REMARK 465 ASN B 6 REMARK 465 PRO B 7 REMARK 465 SER B 8 REMARK 465 SER B 9 REMARK 465 ASN B 10 REMARK 465 ILE B 11 REMARK 465 ASP B 12 REMARK 465 PRO B 13 REMARK 465 GLY B 14 REMARK 465 ASP B 15 REMARK 465 TYR B 16 REMARK 465 VAL B 17 REMARK 465 GLU B 18 REMARK 465 MET B 19 REMARK 465 ASN B 20 REMARK 465 ASP B 21 REMARK 465 SER B 22 REMARK 465 ILE B 23 REMARK 465 THR B 24 REMARK 465 HIS B 25 REMARK 465 LEU B 26 REMARK 465 PRO B 27 REMARK 465 SER B 28 REMARK 465 LYS B 29 REMARK 465 VAL B 30 REMARK 465 VAL B 31 REMARK 465 ILE B 32 REMARK 465 LYS B 105 REMARK 465 LEU B 106 REMARK 465 PRO B 107 REMARK 465 LEU B 108 REMARK 465 LEU B 109 REMARK 465 LYS B 110 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 49 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 74 CG CD CE NZ REMARK 470 GLU A 75 CG CD OE1 OE2 REMARK 470 GLN B 33 CG CD OE1 NE2 REMARK 470 ARG B 49 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 102 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN B 93 79.91 -119.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 41 SG REMARK 620 2 CYS A 44 SG 107.9 REMARK 620 3 CYS A 61 SG 103.5 108.5 REMARK 620 4 CYS A 64 SG 116.9 108.9 110.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 202 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 56 SG REMARK 620 2 HIS A 58 ND1 111.4 REMARK 620 3 CYS A 78 SG 105.9 109.5 REMARK 620 4 CYS A 81 SG 105.9 114.6 109.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 41 SG REMARK 620 2 CYS B 44 SG 106.4 REMARK 620 3 CYS B 61 SG 103.5 109.8 REMARK 620 4 CYS B 64 SG 117.6 108.4 111.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 202 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 56 SG REMARK 620 2 HIS B 58 ND1 107.4 REMARK 620 3 CYS B 78 SG 105.0 107.5 REMARK 620 4 CYS B 81 SG 107.2 117.0 112.0 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN B 202 DBREF 6YXE A 1 110 UNP Q86WT6 TRI69_HUMAN 1 110 DBREF 6YXE B 1 110 UNP Q86WT6 TRI69_HUMAN 1 110 SEQADV 6YXE HIS A -17 UNP Q86WT6 EXPRESSION TAG SEQADV 6YXE HIS A -16 UNP Q86WT6 EXPRESSION TAG SEQADV 6YXE HIS A -15 UNP Q86WT6 EXPRESSION TAG SEQADV 6YXE HIS A -14 UNP Q86WT6 EXPRESSION TAG SEQADV 6YXE HIS A -13 UNP Q86WT6 EXPRESSION TAG SEQADV 6YXE HIS A -12 UNP Q86WT6 EXPRESSION TAG SEQADV 6YXE SER A -11 UNP Q86WT6 EXPRESSION TAG SEQADV 6YXE ALA A -10 UNP Q86WT6 EXPRESSION TAG SEQADV 6YXE ALA A -9 UNP Q86WT6 EXPRESSION TAG SEQADV 6YXE LEU A -8 UNP Q86WT6 EXPRESSION TAG SEQADV 6YXE GLU A -7 UNP Q86WT6 EXPRESSION TAG SEQADV 6YXE VAL A -6 UNP Q86WT6 EXPRESSION TAG SEQADV 6YXE LEU A -5 UNP Q86WT6 EXPRESSION TAG SEQADV 6YXE PHE A -4 UNP Q86WT6 EXPRESSION TAG SEQADV 6YXE GLN A -3 UNP Q86WT6 EXPRESSION TAG SEQADV 6YXE GLY A -2 UNP Q86WT6 EXPRESSION TAG SEQADV 6YXE PRO A -1 UNP Q86WT6 EXPRESSION TAG SEQADV 6YXE GLY A 0 UNP Q86WT6 EXPRESSION TAG SEQADV 6YXE HIS B -17 UNP Q86WT6 EXPRESSION TAG SEQADV 6YXE HIS B -16 UNP Q86WT6 EXPRESSION TAG SEQADV 6YXE HIS B -15 UNP Q86WT6 EXPRESSION TAG SEQADV 6YXE HIS B -14 UNP Q86WT6 EXPRESSION TAG SEQADV 6YXE HIS B -13 UNP Q86WT6 EXPRESSION TAG SEQADV 6YXE HIS B -12 UNP Q86WT6 EXPRESSION TAG SEQADV 6YXE SER B -11 UNP Q86WT6 EXPRESSION TAG SEQADV 6YXE ALA B -10 UNP Q86WT6 EXPRESSION TAG SEQADV 6YXE ALA B -9 UNP Q86WT6 EXPRESSION TAG SEQADV 6YXE LEU B -8 UNP Q86WT6 EXPRESSION TAG SEQADV 6YXE GLU B -7 UNP Q86WT6 EXPRESSION TAG SEQADV 6YXE VAL B -6 UNP Q86WT6 EXPRESSION TAG SEQADV 6YXE LEU B -5 UNP Q86WT6 EXPRESSION TAG SEQADV 6YXE PHE B -4 UNP Q86WT6 EXPRESSION TAG SEQADV 6YXE GLN B -3 UNP Q86WT6 EXPRESSION TAG SEQADV 6YXE GLY B -2 UNP Q86WT6 EXPRESSION TAG SEQADV 6YXE PRO B -1 UNP Q86WT6 EXPRESSION TAG SEQADV 6YXE GLY B 0 UNP Q86WT6 EXPRESSION TAG SEQRES 1 A 128 HIS HIS HIS HIS HIS HIS SER ALA ALA LEU GLU VAL LEU SEQRES 2 A 128 PHE GLN GLY PRO GLY MET GLU VAL SER THR ASN PRO SER SEQRES 3 A 128 SER ASN ILE ASP PRO GLY ASP TYR VAL GLU MET ASN ASP SEQRES 4 A 128 SER ILE THR HIS LEU PRO SER LYS VAL VAL ILE GLN ASP SEQRES 5 A 128 ILE THR MET GLU LEU HIS CYS PRO LEU CYS ASN ASP TRP SEQRES 6 A 128 PHE ARG ASP PRO LEU MET LEU SER CYS GLY HIS ASN PHE SEQRES 7 A 128 CYS GLU ALA CYS ILE GLN ASP PHE TRP ARG LEU GLN ALA SEQRES 8 A 128 LYS GLU THR PHE CYS PRO GLU CYS LYS MET LEU CYS GLN SEQRES 9 A 128 TYR ASN ASN CYS THR PHE ASN PRO VAL LEU ASP LYS LEU SEQRES 10 A 128 VAL GLU LYS ILE LYS LYS LEU PRO LEU LEU LYS SEQRES 1 B 128 HIS HIS HIS HIS HIS HIS SER ALA ALA LEU GLU VAL LEU SEQRES 2 B 128 PHE GLN GLY PRO GLY MET GLU VAL SER THR ASN PRO SER SEQRES 3 B 128 SER ASN ILE ASP PRO GLY ASP TYR VAL GLU MET ASN ASP SEQRES 4 B 128 SER ILE THR HIS LEU PRO SER LYS VAL VAL ILE GLN ASP SEQRES 5 B 128 ILE THR MET GLU LEU HIS CYS PRO LEU CYS ASN ASP TRP SEQRES 6 B 128 PHE ARG ASP PRO LEU MET LEU SER CYS GLY HIS ASN PHE SEQRES 7 B 128 CYS GLU ALA CYS ILE GLN ASP PHE TRP ARG LEU GLN ALA SEQRES 8 B 128 LYS GLU THR PHE CYS PRO GLU CYS LYS MET LEU CYS GLN SEQRES 9 B 128 TYR ASN ASN CYS THR PHE ASN PRO VAL LEU ASP LYS LEU SEQRES 10 B 128 VAL GLU LYS ILE LYS LYS LEU PRO LEU LEU LYS HET ZN A 201 1 HET ZN A 202 1 HET ZN B 201 1 HET ZN B 202 1 HETNAM ZN ZINC ION FORMUL 3 ZN 4(ZN 2+) FORMUL 7 HOH *30(H2 O) HELIX 1 AA1 PRO A 27 LEU A 39 1 13 HELIX 2 AA2 GLU A 62 GLN A 72 1 11 HELIX 3 AA3 GLN A 86 CYS A 90 5 5 HELIX 4 AA4 ASN A 93 LYS A 104 1 12 HELIX 5 AA5 ASP B 34 LEU B 39 1 6 HELIX 6 AA6 GLU B 62 ALA B 73 1 12 HELIX 7 AA7 GLN B 86 CYS B 90 5 5 HELIX 8 AA8 ASN B 93 LYS B 104 1 12 SHEET 1 AA1 3 ASN A 59 CYS A 61 0 SHEET 2 AA1 3 PRO A 51 MET A 53 -1 N LEU A 52 O PHE A 60 SHEET 3 AA1 3 THR A 91 PHE A 92 -1 O THR A 91 N MET A 53 SHEET 1 AA2 3 ASN B 59 CYS B 61 0 SHEET 2 AA2 3 PRO B 51 MET B 53 -1 N LEU B 52 O PHE B 60 SHEET 3 AA2 3 THR B 91 PHE B 92 -1 O THR B 91 N MET B 53 LINK SG CYS A 41 ZN ZN A 201 1555 1555 2.38 LINK SG CYS A 44 ZN ZN A 201 1555 1555 2.29 LINK SG CYS A 56 ZN ZN A 202 1555 1555 2.26 LINK ND1 HIS A 58 ZN ZN A 202 1555 1555 2.02 LINK SG CYS A 61 ZN ZN A 201 1555 1555 2.30 LINK SG CYS A 64 ZN ZN A 201 1555 1555 2.25 LINK SG CYS A 78 ZN ZN A 202 1555 1555 2.31 LINK SG CYS A 81 ZN ZN A 202 1555 1555 2.34 LINK SG CYS B 41 ZN ZN B 201 1555 1555 2.35 LINK SG CYS B 44 ZN ZN B 201 1555 1555 2.32 LINK SG CYS B 56 ZN ZN B 202 1555 1555 2.31 LINK ND1 HIS B 58 ZN ZN B 202 1555 1555 2.05 LINK SG CYS B 61 ZN ZN B 201 1555 1555 2.31 LINK SG CYS B 64 ZN ZN B 201 1555 1555 2.26 LINK SG CYS B 78 ZN ZN B 202 1555 1555 2.31 LINK SG CYS B 81 ZN ZN B 202 1555 1555 2.29 SITE 1 AC1 4 CYS A 41 CYS A 44 CYS A 61 CYS A 64 SITE 1 AC2 4 CYS A 56 HIS A 58 CYS A 78 CYS A 81 SITE 1 AC3 4 CYS B 41 CYS B 44 CYS B 61 CYS B 64 SITE 1 AC4 4 CYS B 56 HIS B 58 CYS B 78 CYS B 81 CRYST1 109.965 109.965 90.135 90.00 90.00 120.00 H 3 2 36 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009094 0.005250 0.000000 0.00000 SCALE2 0.000000 0.010501 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011095 0.00000