HEADER TRANSFERASE 04-MAY-20 6YXV TITLE FOCAL ADHESION KINASE CATALYTIC DOMAIN IN COMPLEX WITH N-METHYL-N-{3- TITLE 2 [(2-PHENYLAMINO-5-TRIFLUOROMETHYL-PYRIMIDIN-4-YLAMINO)-METHYL]- TITLE 3 PYRIDIN-2-YL}-METHANESULFONAMIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: FOCAL ADHESION KINASE 1; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: FADK 1,FOCAL ADHESION KINASE-RELATED NONKINASE,FRNK,PROTEIN COMPND 5 PHOSPHATASE 1 REGULATORY SUBUNIT 71,PPP1R71,PROTEIN-TYROSINE KINASE COMPND 6 2,P125FAK,PP125FAK; COMPND 7 EC: 2.7.10.2; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PTK2, FAK, FAK1; SOURCE 6 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 7 EXPRESSION_SYSTEM_COMMON: CABBAGE LOOPER; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 7111 KEYWDS PROTEIN TYROSINE KINASE, ATP BINDING, TRANSFERASE, TRANSFERASE- KEYWDS 2 INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR D.MUSIL,T.HEINRICH,M.AMARAL REVDAT 3 24-JAN-24 6YXV 1 REMARK REVDAT 2 02-JUN-21 6YXV 1 JRNL REVDAT 1 10-FEB-21 6YXV 0 JRNL AUTH B.T.BERGER,M.AMARAL,D.B.KOKH,A.NUNES-ALVES,D.MUSIL, JRNL AUTH 2 T.HEINRICH,M.SCHRODER,R.NEIL,J.WANG,I.NAVRATILOVA,J.BOMKE, JRNL AUTH 3 J.M.ELKINS,S.MULLER,M.FRECH,R.C.WADE,S.KNAPP JRNL TITL STRUCTURE-KINETIC RELATIONSHIP REVEALS THE MECHANISM OF JRNL TITL 2 SELECTIVITY OF FAK INHIBITORS OVER PYK2. JRNL REF CELL CHEM BIOL V. 28 686 2021 JRNL REFN ESSN 2451-9456 JRNL PMID 33497606 JRNL DOI 10.1016/J.CHEMBIOL.2021.01.003 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.11.7 (19-MAR-2020) REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 171.52 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 92.6 REMARK 3 NUMBER OF REFLECTIONS : 44522 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.204 REMARK 3 R VALUE (WORKING SET) : 0.202 REMARK 3 FREE R VALUE : 0.232 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.980 REMARK 3 FREE R VALUE TEST SET COUNT : 2217 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 51 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.47 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 891 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2284 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 857 REMARK 3 BIN R VALUE (WORKING SET) : 0.2269 REMARK 3 BIN FREE R VALUE : 0.2681 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 3.82 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 34 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.000 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 8387 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 129 REMARK 3 SOLVENT ATOMS : 138 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 60.78 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 3.80230 REMARK 3 B22 (A**2) : 2.90370 REMARK 3 B33 (A**2) : -6.70600 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 4.93500 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.380 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.465 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.263 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.499 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.271 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.910 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.881 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 8714 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 11797 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 3074 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES : 1529 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 8714 ; 10.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 1102 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 6185 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.008 REMARK 3 BOND ANGLES (DEGREES) : 0.98 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.05 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 17.56 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|* } REMARK 3 ORIGIN FOR THE GROUP (A): 20.2289 14.1227 8.1887 REMARK 3 T TENSOR REMARK 3 T11: -0.0593 T22: 0.0131 REMARK 3 T33: -0.2072 T12: -0.0558 REMARK 3 T13: -0.0059 T23: -0.0270 REMARK 3 L TENSOR REMARK 3 L11: 0.3648 L22: 2.8752 REMARK 3 L33: 5.0465 L12: -0.3693 REMARK 3 L13: -0.9633 L23: -2.1768 REMARK 3 S TENSOR REMARK 3 S11: 0.1190 S12: 0.1300 S13: -0.0132 REMARK 3 S21: 0.0737 S22: -0.1865 S23: 0.1379 REMARK 3 S31: -0.1034 S32: -0.1688 S33: 0.0675 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { B|* } REMARK 3 ORIGIN FOR THE GROUP (A): 18.3090 -13.7244 43.1158 REMARK 3 T TENSOR REMARK 3 T11: -0.0623 T22: -0.0630 REMARK 3 T33: -0.0713 T12: -0.1564 REMARK 3 T13: 0.0716 T23: -0.0311 REMARK 3 L TENSOR REMARK 3 L11: 0.9889 L22: 1.5389 REMARK 3 L33: 4.2885 L12: 0.4292 REMARK 3 L13: -1.4342 L23: -1.0764 REMARK 3 S TENSOR REMARK 3 S11: -0.2189 S12: -0.0886 S13: -0.2321 REMARK 3 S21: -0.0882 S22: -0.0177 S23: -0.1958 REMARK 3 S31: 0.0995 S32: -0.0520 S33: 0.2365 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: { C|* } REMARK 3 ORIGIN FOR THE GROUP (A): 42.6069 9.6217 52.4555 REMARK 3 T TENSOR REMARK 3 T11: -0.0894 T22: 0.0254 REMARK 3 T33: -0.1640 T12: -0.2090 REMARK 3 T13: 0.0431 T23: -0.0286 REMARK 3 L TENSOR REMARK 3 L11: 2.7322 L22: 1.2904 REMARK 3 L33: 3.1845 L12: 0.1842 REMARK 3 L13: -1.6280 L23: 0.1807 REMARK 3 S TENSOR REMARK 3 S11: -0.2113 S12: 0.0109 S13: -0.2282 REMARK 3 S21: 0.0094 S22: 0.1538 S23: -0.0411 REMARK 3 S31: 0.1245 S32: 0.1969 S33: 0.0575 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: { D|* } REMARK 3 ORIGIN FOR THE GROUP (A): 14.4700 32.2899 78.9201 REMARK 3 T TENSOR REMARK 3 T11: 0.0832 T22: -0.2100 REMARK 3 T33: -0.1658 T12: -0.0140 REMARK 3 T13: 0.1870 T23: -0.0024 REMARK 3 L TENSOR REMARK 3 L11: 2.2266 L22: 1.5414 REMARK 3 L33: 6.0971 L12: -0.6401 REMARK 3 L13: -2.9288 L23: 1.9992 REMARK 3 S TENSOR REMARK 3 S11: -0.2152 S12: 0.1101 S13: -0.0075 REMARK 3 S21: 0.2049 S22: -0.1540 S23: 0.3237 REMARK 3 S31: 0.2343 S32: 0.0209 S33: 0.3692 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6YXV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 06-MAY-20. REMARK 100 THE DEPOSITION ID IS D_1292108480. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-DEC-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.99998 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AUTOPROC REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 44522 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.298 REMARK 200 RESOLUTION RANGE LOW (A) : 171.520 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 92.6 REMARK 200 DATA REDUNDANCY : 3.300 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.57 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4GU6 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.29 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.02 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 15% PEG 3350, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 59.02500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 38.56350 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 59.02500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 38.56350 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 408 REMARK 465 SER A 409 REMARK 465 GLY A 410 REMARK 465 SER A 411 REMARK 465 THR A 412 REMARK 465 ARG A 413 REMARK 465 GLU A 572 REMARK 465 ASP A 573 REMARK 465 SER A 574 REMARK 465 THR A 575 REMARK 465 TYR A 576 REMARK 465 TYR A 577 REMARK 465 LYS A 578 REMARK 465 ALA A 579 REMARK 465 SER A 580 REMARK 465 LYS A 581 REMARK 465 GLY A 582 REMARK 465 LYS A 583 REMARK 465 GLN A 687 REMARK 465 GLU A 688 REMARK 465 GLU A 689 REMARK 465 GLY B 408 REMARK 465 SER B 409 REMARK 465 GLY B 410 REMARK 465 SER B 411 REMARK 465 THR B 412 REMARK 465 ARG B 413 REMARK 465 ASP B 414 REMARK 465 GLU B 572 REMARK 465 ASP B 573 REMARK 465 SER B 574 REMARK 465 THR B 575 REMARK 465 TYR B 576 REMARK 465 TYR B 577 REMARK 465 LYS B 578 REMARK 465 ALA B 579 REMARK 465 SER B 580 REMARK 465 LYS B 581 REMARK 465 GLY B 582 REMARK 465 LYS B 583 REMARK 465 GLN B 687 REMARK 465 GLU B 688 REMARK 465 GLU B 689 REMARK 465 GLY C 408 REMARK 465 SER C 409 REMARK 465 GLY C 410 REMARK 465 SER C 411 REMARK 465 THR C 412 REMARK 465 ARG C 413 REMARK 465 SER C 574 REMARK 465 THR C 575 REMARK 465 TYR C 576 REMARK 465 TYR C 577 REMARK 465 LYS C 578 REMARK 465 ALA C 579 REMARK 465 SER C 580 REMARK 465 LYS C 581 REMARK 465 GLN C 687 REMARK 465 GLU C 688 REMARK 465 GLU C 689 REMARK 465 GLY D 408 REMARK 465 SER D 409 REMARK 465 GLY D 410 REMARK 465 SER D 411 REMARK 465 THR D 412 REMARK 465 ARG D 413 REMARK 465 ASP D 414 REMARK 465 ARG D 569 REMARK 465 TYR D 570 REMARK 465 MET D 571 REMARK 465 GLU D 572 REMARK 465 ASP D 573 REMARK 465 SER D 574 REMARK 465 THR D 575 REMARK 465 TYR D 576 REMARK 465 TYR D 577 REMARK 465 LYS D 578 REMARK 465 ALA D 579 REMARK 465 SER D 580 REMARK 465 LYS D 581 REMARK 465 GLY D 582 REMARK 465 LYS D 583 REMARK 465 GLN D 687 REMARK 465 GLU D 688 REMARK 465 GLU D 689 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 458 45.57 -109.54 REMARK 500 ASP A 546 58.46 -159.69 REMARK 500 ARG A 569 -59.41 -25.21 REMARK 500 CYS B 459 38.31 -83.56 REMARK 500 ARG B 545 -2.33 75.37 REMARK 500 ASN B 646 -1.02 70.01 REMARK 500 ALA B 685 35.98 -90.03 REMARK 500 TYR C 415 43.66 -91.75 REMARK 500 LYS C 515 -121.11 56.51 REMARK 500 ARG C 545 -1.43 73.82 REMARK 500 ASN C 646 -1.73 71.93 REMARK 500 ASP D 479 89.10 -153.30 REMARK 500 ARG D 545 -1.97 74.99 REMARK 500 ASP D 546 68.45 -151.33 REMARK 500 ASN D 646 -2.20 73.25 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue Q2H A 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue Q2H B 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 702 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue Q2H C 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue Q2H D 701 DBREF 6YXV A 411 689 UNP Q05397 FAK1_HUMAN 411 689 DBREF 6YXV B 411 689 UNP Q05397 FAK1_HUMAN 411 689 DBREF 6YXV C 411 689 UNP Q05397 FAK1_HUMAN 411 689 DBREF 6YXV D 411 689 UNP Q05397 FAK1_HUMAN 411 689 SEQADV 6YXV GLY A 408 UNP Q05397 EXPRESSION TAG SEQADV 6YXV SER A 409 UNP Q05397 EXPRESSION TAG SEQADV 6YXV GLY A 410 UNP Q05397 EXPRESSION TAG SEQADV 6YXV GLY B 408 UNP Q05397 EXPRESSION TAG SEQADV 6YXV SER B 409 UNP Q05397 EXPRESSION TAG SEQADV 6YXV GLY B 410 UNP Q05397 EXPRESSION TAG SEQADV 6YXV GLY C 408 UNP Q05397 EXPRESSION TAG SEQADV 6YXV SER C 409 UNP Q05397 EXPRESSION TAG SEQADV 6YXV GLY C 410 UNP Q05397 EXPRESSION TAG SEQADV 6YXV GLY D 408 UNP Q05397 EXPRESSION TAG SEQADV 6YXV SER D 409 UNP Q05397 EXPRESSION TAG SEQADV 6YXV GLY D 410 UNP Q05397 EXPRESSION TAG SEQRES 1 A 282 GLY SER GLY SER THR ARG ASP TYR GLU ILE GLN ARG GLU SEQRES 2 A 282 ARG ILE GLU LEU GLY ARG CYS ILE GLY GLU GLY GLN PHE SEQRES 3 A 282 GLY ASP VAL HIS GLN GLY ILE TYR MET SER PRO GLU ASN SEQRES 4 A 282 PRO ALA LEU ALA VAL ALA ILE LYS THR CYS LYS ASN CYS SEQRES 5 A 282 THR SER ASP SER VAL ARG GLU LYS PHE LEU GLN GLU ALA SEQRES 6 A 282 LEU THR MET ARG GLN PHE ASP HIS PRO HIS ILE VAL LYS SEQRES 7 A 282 LEU ILE GLY VAL ILE THR GLU ASN PRO VAL TRP ILE ILE SEQRES 8 A 282 MET GLU LEU CYS THR LEU GLY GLU LEU ARG SER PHE LEU SEQRES 9 A 282 GLN VAL ARG LYS TYR SER LEU ASP LEU ALA SER LEU ILE SEQRES 10 A 282 LEU TYR ALA TYR GLN LEU SER THR ALA LEU ALA TYR LEU SEQRES 11 A 282 GLU SER LYS ARG PHE VAL HIS ARG ASP ILE ALA ALA ARG SEQRES 12 A 282 ASN VAL LEU VAL SER SER ASN ASP CYS VAL LYS LEU GLY SEQRES 13 A 282 ASP PHE GLY LEU SER ARG TYR MET GLU ASP SER THR TYR SEQRES 14 A 282 TYR LYS ALA SER LYS GLY LYS LEU PRO ILE LYS TRP MET SEQRES 15 A 282 ALA PRO GLU SER ILE ASN PHE ARG ARG PHE THR SER ALA SEQRES 16 A 282 SER ASP VAL TRP MET PHE GLY VAL CYS MET TRP GLU ILE SEQRES 17 A 282 LEU MET HIS GLY VAL LYS PRO PHE GLN GLY VAL LYS ASN SEQRES 18 A 282 ASN ASP VAL ILE GLY ARG ILE GLU ASN GLY GLU ARG LEU SEQRES 19 A 282 PRO MET PRO PRO ASN CYS PRO PRO THR LEU TYR SER LEU SEQRES 20 A 282 MET THR LYS CYS TRP ALA TYR ASP PRO SER ARG ARG PRO SEQRES 21 A 282 ARG PHE THR GLU LEU LYS ALA GLN LEU SER THR ILE LEU SEQRES 22 A 282 GLU GLU GLU LYS ALA GLN GLN GLU GLU SEQRES 1 B 282 GLY SER GLY SER THR ARG ASP TYR GLU ILE GLN ARG GLU SEQRES 2 B 282 ARG ILE GLU LEU GLY ARG CYS ILE GLY GLU GLY GLN PHE SEQRES 3 B 282 GLY ASP VAL HIS GLN GLY ILE TYR MET SER PRO GLU ASN SEQRES 4 B 282 PRO ALA LEU ALA VAL ALA ILE LYS THR CYS LYS ASN CYS SEQRES 5 B 282 THR SER ASP SER VAL ARG GLU LYS PHE LEU GLN GLU ALA SEQRES 6 B 282 LEU THR MET ARG GLN PHE ASP HIS PRO HIS ILE VAL LYS SEQRES 7 B 282 LEU ILE GLY VAL ILE THR GLU ASN PRO VAL TRP ILE ILE SEQRES 8 B 282 MET GLU LEU CYS THR LEU GLY GLU LEU ARG SER PHE LEU SEQRES 9 B 282 GLN VAL ARG LYS TYR SER LEU ASP LEU ALA SER LEU ILE SEQRES 10 B 282 LEU TYR ALA TYR GLN LEU SER THR ALA LEU ALA TYR LEU SEQRES 11 B 282 GLU SER LYS ARG PHE VAL HIS ARG ASP ILE ALA ALA ARG SEQRES 12 B 282 ASN VAL LEU VAL SER SER ASN ASP CYS VAL LYS LEU GLY SEQRES 13 B 282 ASP PHE GLY LEU SER ARG TYR MET GLU ASP SER THR TYR SEQRES 14 B 282 TYR LYS ALA SER LYS GLY LYS LEU PRO ILE LYS TRP MET SEQRES 15 B 282 ALA PRO GLU SER ILE ASN PHE ARG ARG PHE THR SER ALA SEQRES 16 B 282 SER ASP VAL TRP MET PHE GLY VAL CYS MET TRP GLU ILE SEQRES 17 B 282 LEU MET HIS GLY VAL LYS PRO PHE GLN GLY VAL LYS ASN SEQRES 18 B 282 ASN ASP VAL ILE GLY ARG ILE GLU ASN GLY GLU ARG LEU SEQRES 19 B 282 PRO MET PRO PRO ASN CYS PRO PRO THR LEU TYR SER LEU SEQRES 20 B 282 MET THR LYS CYS TRP ALA TYR ASP PRO SER ARG ARG PRO SEQRES 21 B 282 ARG PHE THR GLU LEU LYS ALA GLN LEU SER THR ILE LEU SEQRES 22 B 282 GLU GLU GLU LYS ALA GLN GLN GLU GLU SEQRES 1 C 282 GLY SER GLY SER THR ARG ASP TYR GLU ILE GLN ARG GLU SEQRES 2 C 282 ARG ILE GLU LEU GLY ARG CYS ILE GLY GLU GLY GLN PHE SEQRES 3 C 282 GLY ASP VAL HIS GLN GLY ILE TYR MET SER PRO GLU ASN SEQRES 4 C 282 PRO ALA LEU ALA VAL ALA ILE LYS THR CYS LYS ASN CYS SEQRES 5 C 282 THR SER ASP SER VAL ARG GLU LYS PHE LEU GLN GLU ALA SEQRES 6 C 282 LEU THR MET ARG GLN PHE ASP HIS PRO HIS ILE VAL LYS SEQRES 7 C 282 LEU ILE GLY VAL ILE THR GLU ASN PRO VAL TRP ILE ILE SEQRES 8 C 282 MET GLU LEU CYS THR LEU GLY GLU LEU ARG SER PHE LEU SEQRES 9 C 282 GLN VAL ARG LYS TYR SER LEU ASP LEU ALA SER LEU ILE SEQRES 10 C 282 LEU TYR ALA TYR GLN LEU SER THR ALA LEU ALA TYR LEU SEQRES 11 C 282 GLU SER LYS ARG PHE VAL HIS ARG ASP ILE ALA ALA ARG SEQRES 12 C 282 ASN VAL LEU VAL SER SER ASN ASP CYS VAL LYS LEU GLY SEQRES 13 C 282 ASP PHE GLY LEU SER ARG TYR MET GLU ASP SER THR TYR SEQRES 14 C 282 TYR LYS ALA SER LYS GLY LYS LEU PRO ILE LYS TRP MET SEQRES 15 C 282 ALA PRO GLU SER ILE ASN PHE ARG ARG PHE THR SER ALA SEQRES 16 C 282 SER ASP VAL TRP MET PHE GLY VAL CYS MET TRP GLU ILE SEQRES 17 C 282 LEU MET HIS GLY VAL LYS PRO PHE GLN GLY VAL LYS ASN SEQRES 18 C 282 ASN ASP VAL ILE GLY ARG ILE GLU ASN GLY GLU ARG LEU SEQRES 19 C 282 PRO MET PRO PRO ASN CYS PRO PRO THR LEU TYR SER LEU SEQRES 20 C 282 MET THR LYS CYS TRP ALA TYR ASP PRO SER ARG ARG PRO SEQRES 21 C 282 ARG PHE THR GLU LEU LYS ALA GLN LEU SER THR ILE LEU SEQRES 22 C 282 GLU GLU GLU LYS ALA GLN GLN GLU GLU SEQRES 1 D 282 GLY SER GLY SER THR ARG ASP TYR GLU ILE GLN ARG GLU SEQRES 2 D 282 ARG ILE GLU LEU GLY ARG CYS ILE GLY GLU GLY GLN PHE SEQRES 3 D 282 GLY ASP VAL HIS GLN GLY ILE TYR MET SER PRO GLU ASN SEQRES 4 D 282 PRO ALA LEU ALA VAL ALA ILE LYS THR CYS LYS ASN CYS SEQRES 5 D 282 THR SER ASP SER VAL ARG GLU LYS PHE LEU GLN GLU ALA SEQRES 6 D 282 LEU THR MET ARG GLN PHE ASP HIS PRO HIS ILE VAL LYS SEQRES 7 D 282 LEU ILE GLY VAL ILE THR GLU ASN PRO VAL TRP ILE ILE SEQRES 8 D 282 MET GLU LEU CYS THR LEU GLY GLU LEU ARG SER PHE LEU SEQRES 9 D 282 GLN VAL ARG LYS TYR SER LEU ASP LEU ALA SER LEU ILE SEQRES 10 D 282 LEU TYR ALA TYR GLN LEU SER THR ALA LEU ALA TYR LEU SEQRES 11 D 282 GLU SER LYS ARG PHE VAL HIS ARG ASP ILE ALA ALA ARG SEQRES 12 D 282 ASN VAL LEU VAL SER SER ASN ASP CYS VAL LYS LEU GLY SEQRES 13 D 282 ASP PHE GLY LEU SER ARG TYR MET GLU ASP SER THR TYR SEQRES 14 D 282 TYR LYS ALA SER LYS GLY LYS LEU PRO ILE LYS TRP MET SEQRES 15 D 282 ALA PRO GLU SER ILE ASN PHE ARG ARG PHE THR SER ALA SEQRES 16 D 282 SER ASP VAL TRP MET PHE GLY VAL CYS MET TRP GLU ILE SEQRES 17 D 282 LEU MET HIS GLY VAL LYS PRO PHE GLN GLY VAL LYS ASN SEQRES 18 D 282 ASN ASP VAL ILE GLY ARG ILE GLU ASN GLY GLU ARG LEU SEQRES 19 D 282 PRO MET PRO PRO ASN CYS PRO PRO THR LEU TYR SER LEU SEQRES 20 D 282 MET THR LYS CYS TRP ALA TYR ASP PRO SER ARG ARG PRO SEQRES 21 D 282 ARG PHE THR GLU LEU LYS ALA GLN LEU SER THR ILE LEU SEQRES 22 D 282 GLU GLU GLU LYS ALA GLN GLN GLU GLU HET Q2H A 701 31 HET Q2H B 701 31 HET SO4 B 702 5 HET Q2H C 701 31 HET Q2H D 701 31 HETNAM Q2H ~{N}-METHYL-~{N}-[3-[(~{E})-[2-PHENYLAZANYL-5- HETNAM 2 Q2H (TRIFLUOROMETHYL)PYRIMIDIN-4-YL]IMINOMETHYL]PYRIDIN-2- HETNAM 3 Q2H YL]METHANESULFONAMIDE HETNAM SO4 SULFATE ION FORMUL 5 Q2H 4(C19 H17 F3 N6 O2 S) FORMUL 7 SO4 O4 S 2- FORMUL 10 HOH *138(H2 O) HELIX 1 AA1 GLN A 418 GLU A 420 5 3 HELIX 2 AA2 SER A 461 GLN A 477 1 17 HELIX 3 AA3 GLU A 506 ARG A 514 1 9 HELIX 4 AA4 ASP A 519 LYS A 540 1 22 HELIX 5 AA5 ALA A 548 ARG A 550 5 3 HELIX 6 AA6 PRO A 585 MET A 589 5 5 HELIX 7 AA7 ALA A 590 ARG A 597 1 8 HELIX 8 AA8 THR A 600 MET A 617 1 18 HELIX 9 AA9 LYS A 627 ASN A 637 1 11 HELIX 10 AB1 PRO A 648 TRP A 659 1 12 HELIX 11 AB2 ASP A 662 ARG A 666 5 5 HELIX 12 AB3 ARG A 668 ALA A 685 1 18 HELIX 13 AB4 GLN B 418 GLU B 420 5 3 HELIX 14 AB5 SER B 461 GLN B 477 1 17 HELIX 15 AB6 GLU B 506 ARG B 514 1 9 HELIX 16 AB7 ASP B 519 LYS B 540 1 22 HELIX 17 AB8 ALA B 548 ARG B 550 5 3 HELIX 18 AB9 PRO B 585 MET B 589 5 5 HELIX 19 AC1 ALA B 590 ARG B 597 1 8 HELIX 20 AC2 THR B 600 MET B 617 1 18 HELIX 21 AC3 LYS B 627 ASN B 637 1 11 HELIX 22 AC4 PRO B 648 TRP B 659 1 12 HELIX 23 AC5 ASP B 662 ARG B 666 5 5 HELIX 24 AC6 ARG B 668 ALA B 685 1 18 HELIX 25 AC7 GLN C 418 GLU C 420 5 3 HELIX 26 AC8 SER C 461 GLN C 477 1 17 HELIX 27 AC9 GLU C 506 LYS C 515 1 10 HELIX 28 AD1 TYR C 516 LEU C 518 5 3 HELIX 29 AD2 ASP C 519 LYS C 540 1 22 HELIX 30 AD3 ALA C 548 ARG C 550 5 3 HELIX 31 AD4 PRO C 585 MET C 589 5 5 HELIX 32 AD5 ALA C 590 ARG C 597 1 8 HELIX 33 AD6 THR C 600 MET C 617 1 18 HELIX 34 AD7 LYS C 627 ASN C 637 1 11 HELIX 35 AD8 PRO C 648 TRP C 659 1 12 HELIX 36 AD9 ASP C 662 ARG C 666 5 5 HELIX 37 AE1 ARG C 668 ALA C 685 1 18 HELIX 38 AE2 GLN D 418 GLU D 420 5 3 HELIX 39 AE3 SER D 461 GLN D 477 1 17 HELIX 40 AE4 LEU D 507 ARG D 514 1 8 HELIX 41 AE5 ASP D 519 LYS D 540 1 22 HELIX 42 AE6 ALA D 548 ARG D 550 5 3 HELIX 43 AE7 PRO D 585 MET D 589 5 5 HELIX 44 AE8 ALA D 590 ARG D 597 1 8 HELIX 45 AE9 THR D 600 MET D 617 1 18 HELIX 46 AF1 LYS D 627 ASN D 637 1 11 HELIX 47 AF2 PRO D 648 CYS D 658 1 11 HELIX 48 AF3 ASP D 662 ARG D 666 5 5 HELIX 49 AF4 ARG D 668 ALA D 685 1 18 SHEET 1 AA1 5 ILE A 422 GLU A 430 0 SHEET 2 AA1 5 ASP A 435 TYR A 441 -1 O GLN A 438 N ARG A 426 SHEET 3 AA1 5 LEU A 449 THR A 455 -1 O ILE A 453 N HIS A 437 SHEET 4 AA1 5 TRP A 496 GLU A 500 -1 O MET A 499 N ALA A 452 SHEET 5 AA1 5 LEU A 486 ILE A 490 -1 N ILE A 487 O ILE A 498 SHEET 1 AA2 2 VAL A 552 SER A 556 0 SHEET 2 AA2 2 CYS A 559 LEU A 562 -1 O LYS A 561 N LEU A 553 SHEET 1 AA3 5 ILE B 422 GLU B 430 0 SHEET 2 AA3 5 ASP B 435 TYR B 441 -1 O GLN B 438 N ARG B 426 SHEET 3 AA3 5 LEU B 449 THR B 455 -1 O ILE B 453 N HIS B 437 SHEET 4 AA3 5 TRP B 496 GLU B 500 -1 O MET B 499 N ALA B 452 SHEET 5 AA3 5 LEU B 486 ILE B 490 -1 N ILE B 487 O ILE B 498 SHEET 1 AA4 2 VAL B 552 SER B 556 0 SHEET 2 AA4 2 CYS B 559 LEU B 562 -1 O LYS B 561 N LEU B 553 SHEET 1 AA5 5 ILE C 422 GLU C 430 0 SHEET 2 AA5 5 ASP C 435 TYR C 441 -1 O GLN C 438 N ARG C 426 SHEET 3 AA5 5 LEU C 449 THR C 455 -1 O ILE C 453 N HIS C 437 SHEET 4 AA5 5 TRP C 496 GLU C 500 -1 O MET C 499 N ALA C 452 SHEET 5 AA5 5 LEU C 486 ILE C 490 -1 N ILE C 487 O ILE C 498 SHEET 1 AA6 2 VAL C 552 SER C 556 0 SHEET 2 AA6 2 CYS C 559 LEU C 562 -1 O LYS C 561 N LEU C 553 SHEET 1 AA7 5 ILE D 422 GLU D 430 0 SHEET 2 AA7 5 ASP D 435 TYR D 441 -1 O GLN D 438 N ARG D 426 SHEET 3 AA7 5 LEU D 449 THR D 455 -1 O ILE D 453 N HIS D 437 SHEET 4 AA7 5 TRP D 496 GLU D 500 -1 O ILE D 497 N LYS D 454 SHEET 5 AA7 5 LEU D 486 ILE D 490 -1 N GLY D 488 O ILE D 498 SHEET 1 AA8 3 GLY D 505 GLU D 506 0 SHEET 2 AA8 3 VAL D 552 SER D 556 -1 O VAL D 554 N GLY D 505 SHEET 3 AA8 3 CYS D 559 LEU D 562 -1 O LYS D 561 N LEU D 553 SSBOND 1 CYS A 456 CYS A 459 1555 1555 2.03 SSBOND 2 CYS B 456 CYS B 459 1555 1555 2.04 SSBOND 3 CYS C 456 CYS C 459 1555 1555 2.04 SSBOND 4 CYS D 456 CYS D 459 1555 1555 2.03 CISPEP 1 ASN A 493 PRO A 494 0 -1.84 CISPEP 2 ASN B 493 PRO B 494 0 0.99 CISPEP 3 ASN C 493 PRO C 494 0 2.01 CISPEP 4 ASN D 493 PRO D 494 0 -1.39 SITE 1 AC1 16 ILE A 428 GLU A 430 VAL A 436 ALA A 452 SITE 2 AC1 16 VAL A 484 MET A 499 GLU A 500 LEU A 501 SITE 3 AC1 16 CYS A 502 ARG A 550 ASN A 551 LEU A 553 SITE 4 AC1 16 GLY A 563 ASP A 564 LEU A 567 SER A 568 SITE 1 AC2 15 ARG B 426 GLU B 430 ALA B 452 VAL B 484 SITE 2 AC2 15 MET B 499 GLU B 500 LEU B 501 CYS B 502 SITE 3 AC2 15 GLY B 505 ASN B 551 LEU B 553 GLY B 563 SITE 4 AC2 15 ASP B 564 LEU B 567 SER B 568 SITE 1 AC3 4 SER B 601 ARG B 668 SER C 601 ARG C 668 SITE 1 AC4 15 ARG C 426 ILE C 428 GLU C 430 VAL C 436 SITE 2 AC4 15 ALA C 452 MET C 499 GLU C 500 CYS C 502 SITE 3 AC4 15 GLY C 505 ASN C 551 LEU C 553 GLY C 563 SITE 4 AC4 15 ASP C 564 LEU C 567 SER C 568 SITE 1 AC5 13 ILE D 428 VAL D 436 MET D 499 GLU D 500 SITE 2 AC5 13 LEU D 501 CYS D 502 GLY D 505 ASN D 551 SITE 3 AC5 13 LEU D 553 GLY D 563 ASP D 564 LEU D 567 SITE 4 AC5 13 SER D 568 CRYST1 118.050 77.127 174.934 90.00 101.34 90.00 C 1 2 1 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008471 0.000000 0.001699 0.00000 SCALE2 0.000000 0.012966 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005830 0.00000