HEADER DE NOVO PROTEIN 08-MAY-20 6Z0C TITLE STRUCTURE OF IN SILICO MODELLED ARTIFICIAL MAQUETTE-3 PROTEIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: MAQUETTE-3; COMPND 3 CHAIN: A, B, C, D; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 4 ORGANISM_TAXID: 562 KEYWDS FOUR-HELIX BUNDLE, HYDROPHOBIC CORE, ION-PAIR STABILIZATION, KEYWDS 2 STRUCTURAL STABILITY, EXTREMOPHILE, DE NOVO PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.BAUMGART,M.ROEPKE,M.E.MUEHLBAUER,S.ASAMI,S.L.MADER,K.FREDRIKSSON, AUTHOR 2 M.GROLL,A.P.GAMIZ-HERNANDEZ,V.R.I.KAILA REVDAT 3 01-MAY-24 6Z0C 1 REMARK REVDAT 2 31-MAR-21 6Z0C 1 JRNL REVDAT 1 17-MAR-21 6Z0C 0 JRNL AUTH M.BAUMGART,M.ROPKE,M.E.MUHLBAUER,S.ASAMI,S.L.MADER, JRNL AUTH 2 K.FREDRIKSSON,M.GROLL,A.P.GAMIZ-HERNANDEZ,V.R.I.KAILA JRNL TITL DESIGN OF BURIED CHARGED NETWORKS IN ARTIFICIAL PROTEINS JRNL REF NAT COMMUN V. 12 1895 2021 JRNL REFN ESSN 2041-1723 JRNL DOI 10.1038/S41467-021-21909-7 REMARK 2 REMARK 2 RESOLUTION. 1.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0238 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.5 REMARK 3 NUMBER OF REFLECTIONS : 76730 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.189 REMARK 3 R VALUE (WORKING SET) : 0.189 REMARK 3 FREE R VALUE : 0.223 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 4038 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.85 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.90 REMARK 3 REFLECTION IN BIN (WORKING SET) : 5743 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.63 REMARK 3 BIN R VALUE (WORKING SET) : 0.2780 REMARK 3 BIN FREE R VALUE SET COUNT : 302 REMARK 3 BIN FREE R VALUE : 0.3190 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6488 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 2 REMARK 3 SOLVENT ATOMS : 123 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 41.22 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.83000 REMARK 3 B22 (A**2) : -1.18000 REMARK 3 B33 (A**2) : -0.76000 REMARK 3 B12 (A**2) : 0.70000 REMARK 3 B13 (A**2) : 0.93000 REMARK 3 B23 (A**2) : 0.12000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.219 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.128 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.104 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.939 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.965 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.952 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6534 ; 0.003 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 6412 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 8736 ; 1.096 ; 1.637 REMARK 3 BOND ANGLES OTHERS (DEGREES): 15059 ; 1.165 ; 1.573 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 777 ; 3.417 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 389 ;34.860 ;26.298 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1472 ;13.897 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 28 ;12.107 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 807 ; 0.054 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 7081 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1071 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 12946 ; 0.776 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2 A 200 REMARK 3 ORIGIN FOR THE GROUP (A): 5.7500 32.6348 15.3348 REMARK 3 T TENSOR REMARK 3 T11: 0.0062 T22: 0.0071 REMARK 3 T33: 0.0675 T12: -0.0053 REMARK 3 T13: -0.0107 T23: -0.0018 REMARK 3 L TENSOR REMARK 3 L11: 0.0386 L22: 0.2465 REMARK 3 L33: 0.1223 L12: -0.0961 REMARK 3 L13: -0.0667 L23: 0.1729 REMARK 3 S TENSOR REMARK 3 S11: -0.0024 S12: -0.0010 S13: -0.0016 REMARK 3 S21: -0.0029 S22: 0.0077 S23: 0.0026 REMARK 3 S31: -0.0026 S32: 0.0084 S33: -0.0054 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 2 B 197 REMARK 3 ORIGIN FOR THE GROUP (A): -10.9122 20.3636 4.9337 REMARK 3 T TENSOR REMARK 3 T11: 0.0060 T22: 0.0087 REMARK 3 T33: 0.0652 T12: -0.0053 REMARK 3 T13: -0.0118 T23: 0.0012 REMARK 3 L TENSOR REMARK 3 L11: 0.0714 L22: 0.3799 REMARK 3 L33: 0.0159 L12: -0.0455 REMARK 3 L13: 0.0117 L23: 0.0623 REMARK 3 S TENSOR REMARK 3 S11: -0.0023 S12: -0.0004 S13: -0.0081 REMARK 3 S21: 0.0140 S22: 0.0062 S23: -0.0001 REMARK 3 S31: 0.0021 S32: 0.0015 S33: -0.0040 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 2 C 199 REMARK 3 ORIGIN FOR THE GROUP (A): -36.1137 25.8134 -18.6803 REMARK 3 T TENSOR REMARK 3 T11: 0.0053 T22: 0.0076 REMARK 3 T33: 0.0669 T12: -0.0048 REMARK 3 T13: -0.0133 T23: 0.0018 REMARK 3 L TENSOR REMARK 3 L11: 0.0418 L22: 0.2696 REMARK 3 L33: 0.1463 L12: -0.1005 REMARK 3 L13: 0.0737 L23: -0.1984 REMARK 3 S TENSOR REMARK 3 S11: -0.0001 S12: -0.0009 S13: 0.0011 REMARK 3 S21: -0.0025 S22: 0.0032 S23: 0.0010 REMARK 3 S31: 0.0031 S32: -0.0039 S33: -0.0031 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 2 D 197 REMARK 3 ORIGIN FOR THE GROUP (A): -19.3720 38.2480 -29.2195 REMARK 3 T TENSOR REMARK 3 T11: 0.0054 T22: 0.0094 REMARK 3 T33: 0.0640 T12: -0.0049 REMARK 3 T13: -0.0124 T23: -0.0002 REMARK 3 L TENSOR REMARK 3 L11: 0.0634 L22: 0.4216 REMARK 3 L33: 0.0107 L12: -0.0409 REMARK 3 L13: 0.0005 L23: -0.0651 REMARK 3 S TENSOR REMARK 3 S11: -0.0014 S12: -0.0009 S13: 0.0081 REMARK 3 S21: 0.0122 S22: 0.0036 S23: -0.0061 REMARK 3 S31: -0.0013 S32: -0.0006 S33: -0.0022 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 6Z0C COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 08-MAY-20. REMARK 100 THE DEPOSITION ID IS D_1292108627. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-JUL-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 80776 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.850 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.5 REMARK 200 DATA REDUNDANCY : 3.400 REMARK 200 R MERGE (I) : 0.05100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.95 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.5 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.54500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: IN SILICO MAQUETTE MODEL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.78 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.66 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM HEPES, 1.5 M POTASSIUM REMARK 280 PHOSPHATE, PH 7.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 MET B 1 REMARK 465 TYR B 198 REMARK 465 PHE B 199 REMARK 465 GLN B 200 REMARK 465 MET C 1 REMARK 465 GLN C 200 REMARK 465 MET D 1 REMARK 465 GLY D 101 REMARK 465 SER D 102 REMARK 465 GLY D 103 REMARK 465 GLY D 149 REMARK 465 SER D 150 REMARK 465 GLY D 151 REMARK 465 TYR D 198 REMARK 465 PHE D 199 REMARK 465 GLN D 200 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K A 301 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A 101 O REMARK 620 2 GLY A 103 O 94.6 REMARK 620 3 GLN A 200 OE1 71.4 117.9 REMARK 620 4 HOH A 413 O 124.2 105.2 53.2 REMARK 620 5 ALA B 2 O 82.3 49.9 68.1 73.2 REMARK 620 6 HOH B 316 O 157.1 80.0 130.8 78.5 109.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K C 301 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY C 101 O REMARK 620 2 GLY C 103 O 93.4 REMARK 620 3 ALA D 2 O 81.6 47.9 REMARK 620 4 HOH D 311 O 157.9 81.9 109.9 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue K A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue K C 301 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1MFT RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF FOUR-HELIX BUNDLE MODEL DBREF 6Z0C A 1 200 PDB 6Z0C 6Z0C 1 200 DBREF 6Z0C B 1 200 PDB 6Z0C 6Z0C 1 200 DBREF 6Z0C C 1 200 PDB 6Z0C 6Z0C 1 200 DBREF 6Z0C D 1 200 PDB 6Z0C 6Z0C 1 200 SEQRES 1 A 200 MET ALA SER PRO GLU LEU ARG GLN GLU PHE GLN GLN LEU SEQRES 2 A 200 ILE GLN GLU PHE GLN GLN LEU LEU GLN GLU ILE GLN GLN SEQRES 3 A 200 LEU ILE ARG GLU LEU LEU LYS ILE LYS LEU GLN ILE ILE SEQRES 4 A 200 LYS GLN LEU ARG GLU ALA SER GLU LYS ALA ARG ASN PRO SEQRES 5 A 200 GLU LYS LYS SER VAL LEU GLN LYS GLN LEU GLU LEU GLU SEQRES 6 A 200 GLU LYS GLN ILE GLU LEU LEU GLU THR LEU GLN GLN THR SEQRES 7 A 200 ALA GLN GLU ALA GLN GLN LEU LEU GLN GLU LEU GLN GLN SEQRES 8 A 200 THR GLY GLN GLU LEU TRP GLN LEU GLY GLY SER GLY GLY SEQRES 9 A 200 PRO GLU LEU ARG GLN LYS PHE GLN GLN LEU ALA GLN LYS SEQRES 10 A 200 ILE GLN GLN LEU LEU GLN LYS PHE GLN GLN LEU VAL ALA SEQRES 11 A 200 LYS GLN LEU GLU ASP GLU GLU LYS PHE ILE GLU LEU LEU SEQRES 12 A 200 GLU THR ILE LEU GLY GLY SER GLY GLY ASP GLU LEU ARG SEQRES 13 A 200 GLU LEU LEU LYS GLY LYS LEU GLN VAL ILE LYS GLN GLN SEQRES 14 A 200 ARG GLU LEU LEU GLN LEU VAL GLN LYS ALA GLN GLN LEU SEQRES 15 A 200 VAL GLN LYS LEU GLN GLN THR GLY GLN LYS LEU TRP GLU SEQRES 16 A 200 ASN LEU TYR PHE GLN SEQRES 1 B 200 MET ALA SER PRO GLU LEU ARG GLN GLU PHE GLN GLN LEU SEQRES 2 B 200 ILE GLN GLU PHE GLN GLN LEU LEU GLN GLU ILE GLN GLN SEQRES 3 B 200 LEU ILE ARG GLU LEU LEU LYS ILE LYS LEU GLN ILE ILE SEQRES 4 B 200 LYS GLN LEU ARG GLU ALA SER GLU LYS ALA ARG ASN PRO SEQRES 5 B 200 GLU LYS LYS SER VAL LEU GLN LYS GLN LEU GLU LEU GLU SEQRES 6 B 200 GLU LYS GLN ILE GLU LEU LEU GLU THR LEU GLN GLN THR SEQRES 7 B 200 ALA GLN GLU ALA GLN GLN LEU LEU GLN GLU LEU GLN GLN SEQRES 8 B 200 THR GLY GLN GLU LEU TRP GLN LEU GLY GLY SER GLY GLY SEQRES 9 B 200 PRO GLU LEU ARG GLN LYS PHE GLN GLN LEU ALA GLN LYS SEQRES 10 B 200 ILE GLN GLN LEU LEU GLN LYS PHE GLN GLN LEU VAL ALA SEQRES 11 B 200 LYS GLN LEU GLU ASP GLU GLU LYS PHE ILE GLU LEU LEU SEQRES 12 B 200 GLU THR ILE LEU GLY GLY SER GLY GLY ASP GLU LEU ARG SEQRES 13 B 200 GLU LEU LEU LYS GLY LYS LEU GLN VAL ILE LYS GLN GLN SEQRES 14 B 200 ARG GLU LEU LEU GLN LEU VAL GLN LYS ALA GLN GLN LEU SEQRES 15 B 200 VAL GLN LYS LEU GLN GLN THR GLY GLN LYS LEU TRP GLU SEQRES 16 B 200 ASN LEU TYR PHE GLN SEQRES 1 C 200 MET ALA SER PRO GLU LEU ARG GLN GLU PHE GLN GLN LEU SEQRES 2 C 200 ILE GLN GLU PHE GLN GLN LEU LEU GLN GLU ILE GLN GLN SEQRES 3 C 200 LEU ILE ARG GLU LEU LEU LYS ILE LYS LEU GLN ILE ILE SEQRES 4 C 200 LYS GLN LEU ARG GLU ALA SER GLU LYS ALA ARG ASN PRO SEQRES 5 C 200 GLU LYS LYS SER VAL LEU GLN LYS GLN LEU GLU LEU GLU SEQRES 6 C 200 GLU LYS GLN ILE GLU LEU LEU GLU THR LEU GLN GLN THR SEQRES 7 C 200 ALA GLN GLU ALA GLN GLN LEU LEU GLN GLU LEU GLN GLN SEQRES 8 C 200 THR GLY GLN GLU LEU TRP GLN LEU GLY GLY SER GLY GLY SEQRES 9 C 200 PRO GLU LEU ARG GLN LYS PHE GLN GLN LEU ALA GLN LYS SEQRES 10 C 200 ILE GLN GLN LEU LEU GLN LYS PHE GLN GLN LEU VAL ALA SEQRES 11 C 200 LYS GLN LEU GLU ASP GLU GLU LYS PHE ILE GLU LEU LEU SEQRES 12 C 200 GLU THR ILE LEU GLY GLY SER GLY GLY ASP GLU LEU ARG SEQRES 13 C 200 GLU LEU LEU LYS GLY LYS LEU GLN VAL ILE LYS GLN GLN SEQRES 14 C 200 ARG GLU LEU LEU GLN LEU VAL GLN LYS ALA GLN GLN LEU SEQRES 15 C 200 VAL GLN LYS LEU GLN GLN THR GLY GLN LYS LEU TRP GLU SEQRES 16 C 200 ASN LEU TYR PHE GLN SEQRES 1 D 200 MET ALA SER PRO GLU LEU ARG GLN GLU PHE GLN GLN LEU SEQRES 2 D 200 ILE GLN GLU PHE GLN GLN LEU LEU GLN GLU ILE GLN GLN SEQRES 3 D 200 LEU ILE ARG GLU LEU LEU LYS ILE LYS LEU GLN ILE ILE SEQRES 4 D 200 LYS GLN LEU ARG GLU ALA SER GLU LYS ALA ARG ASN PRO SEQRES 5 D 200 GLU LYS LYS SER VAL LEU GLN LYS GLN LEU GLU LEU GLU SEQRES 6 D 200 GLU LYS GLN ILE GLU LEU LEU GLU THR LEU GLN GLN THR SEQRES 7 D 200 ALA GLN GLU ALA GLN GLN LEU LEU GLN GLU LEU GLN GLN SEQRES 8 D 200 THR GLY GLN GLU LEU TRP GLN LEU GLY GLY SER GLY GLY SEQRES 9 D 200 PRO GLU LEU ARG GLN LYS PHE GLN GLN LEU ALA GLN LYS SEQRES 10 D 200 ILE GLN GLN LEU LEU GLN LYS PHE GLN GLN LEU VAL ALA SEQRES 11 D 200 LYS GLN LEU GLU ASP GLU GLU LYS PHE ILE GLU LEU LEU SEQRES 12 D 200 GLU THR ILE LEU GLY GLY SER GLY GLY ASP GLU LEU ARG SEQRES 13 D 200 GLU LEU LEU LYS GLY LYS LEU GLN VAL ILE LYS GLN GLN SEQRES 14 D 200 ARG GLU LEU LEU GLN LEU VAL GLN LYS ALA GLN GLN LEU SEQRES 15 D 200 VAL GLN LYS LEU GLN GLN THR GLY GLN LYS LEU TRP GLU SEQRES 16 D 200 ASN LEU TYR PHE GLN HET K A 301 1 HET K C 301 1 HETNAM K POTASSIUM ION FORMUL 5 K 2(K 1+) FORMUL 7 HOH *123(H2 O) HELIX 1 AA1 SER A 3 ALA A 49 1 47 HELIX 2 AA2 ASN A 51 GLY A 100 1 50 HELIX 3 AA3 GLY A 101 GLY A 103 5 3 HELIX 4 AA4 GLY A 104 THR A 145 1 42 HELIX 5 AA5 GLY A 151 GLU A 195 1 45 HELIX 6 AA6 ASN A 196 GLN A 200 5 5 HELIX 7 AA7 SER B 3 LYS B 48 1 46 HELIX 8 AA8 ASN B 51 ILE B 69 1 19 HELIX 9 AA9 ILE B 69 GLY B 100 1 32 HELIX 10 AB1 PRO B 105 THR B 145 1 41 HELIX 11 AB2 GLY B 151 GLU B 195 1 45 HELIX 12 AB3 SER C 3 ALA C 49 1 47 HELIX 13 AB4 ASN C 51 GLY C 100 1 50 HELIX 14 AB5 GLY C 101 GLY C 103 5 3 HELIX 15 AB6 GLY C 104 GLU C 144 1 41 HELIX 16 AB7 THR C 145 LEU C 147 5 3 HELIX 17 AB8 GLY C 151 GLU C 195 1 45 HELIX 18 AB9 ASN C 196 PHE C 199 5 4 HELIX 19 AC1 SER D 3 ALA D 49 1 47 HELIX 20 AC2 ASN D 51 ILE D 69 1 19 HELIX 21 AC3 ILE D 69 GLY D 100 1 32 HELIX 22 AC4 PRO D 105 THR D 145 1 41 HELIX 23 AC5 ASP D 153 GLU D 195 1 43 LINK O GLY A 101 K K A 301 1555 1555 2.75 LINK O GLY A 103 K K A 301 1555 1555 2.71 LINK OE1 GLN A 200 K K A 301 1555 1555 2.82 LINK K K A 301 O HOH A 413 1555 1555 3.03 LINK K K A 301 O ALA B 2 1565 1555 2.77 LINK K K A 301 O HOH B 316 1555 1545 2.71 LINK O GLY C 101 K K C 301 1555 1555 2.74 LINK O GLY C 103 K K C 301 1555 1555 2.76 LINK K K C 301 O ALA D 2 1545 1555 2.81 LINK K K C 301 O HOH D 311 1555 1565 2.69 SITE 1 AC1 7 GLY A 101 GLY A 103 GLN A 200 HOH A 413 SITE 2 AC1 7 ALA B 2 TRP B 97 HOH B 316 SITE 1 AC2 5 GLY C 101 GLY C 103 ALA D 2 TRP D 97 SITE 2 AC2 5 HOH D 311 CRYST1 62.690 65.900 68.260 89.86 90.29 117.36 P 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015952 0.008256 0.000078 0.00000 SCALE2 0.000000 0.017086 -0.000003 0.00000 SCALE3 0.000000 0.000000 0.014650 0.00000