data_6Z1I # _entry.id 6Z1I # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.338 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 6Z1I WWPDB D_1292108709 EMDB EMD-11030 # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type EMDB 'amyloid fibril from a cardiac lambda 1 light chain' EMD-4452 'other EM volume' PDB 'amyloid fibril from a cardiac lambda 1 light chain' 6IC3 unspecified EMDB 'AL amyloid fibril from a lambda 3 light chain in conformation B' EMD-11030 'associated EM volume' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6Z1I _pdbx_database_status.recvd_initial_deposition_date 2020-05-13 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Radamaker, L.' 1 0000-0002-6610-0907 'Fandrich, M.' 2 0000-0003-2123-6816 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nat Commun' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2041-1723 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 12 _citation.language ? _citation.page_first 875 _citation.page_last 875 _citation.title 'Cryo-EM reveals structural breaks in a patient-derived amyloid fibril from systemic AL amyloidosis.' _citation.year 2021 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41467-021-21126-2 _citation.pdbx_database_id_PubMed 33558536 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Radamaker, L.' 1 0000-0002-6610-0907 primary 'Baur, J.' 2 ? primary 'Huhn, S.' 3 ? primary 'Haupt, C.' 4 ? primary 'Hegenbart, U.' 5 0000-0003-1917-6746 primary 'Schonland, S.' 6 ? primary 'Bansal, A.' 7 0000-0002-4526-366X primary 'Schmidt, M.' 8 0000-0002-9442-460X primary 'Fandrich, M.' 9 0000-0003-2123-6816 # _entity.id 1 _entity.type polymer _entity.src_method nat _entity.pdbx_description 'lambda 3 light chain fragment, residues 2-116' _entity.formula_weight 8664.521 _entity.pdbx_number_of_molecules 6 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;AVSVALGQTVRITCQGDSLRSYSASWYQQKPGQAPVLVIFRNTASLTITGAQAEDEADYYCNSRDSSANHQVFGGGTKLT V ; _entity_poly.pdbx_seq_one_letter_code_can ;AVSVALGQTVRITCQGDSLRSYSASWYQQKPGQAPVLVIFRNTASLTITGAQAEDEADYYCNSRDSSANHQVFGGGTKLT V ; _entity_poly.pdbx_strand_id D,E,F,C,B,A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 VAL n 1 3 SER n 1 4 VAL n 1 5 ALA n 1 6 LEU n 1 7 GLY n 1 8 GLN n 1 9 THR n 1 10 VAL n 1 11 ARG n 1 12 ILE n 1 13 THR n 1 14 CYS n 1 15 GLN n 1 16 GLY n 1 17 ASP n 1 18 SER n 1 19 LEU n 1 20 ARG n 1 21 SER n 1 22 TYR n 1 23 SER n 1 24 ALA n 1 25 SER n 1 26 TRP n 1 27 TYR n 1 28 GLN n 1 29 GLN n 1 30 LYS n 1 31 PRO n 1 32 GLY n 1 33 GLN n 1 34 ALA n 1 35 PRO n 1 36 VAL n 1 37 LEU n 1 38 VAL n 1 39 ILE n 1 40 PHE n 1 41 ARG n 1 42 ASN n 1 43 THR n 1 44 ALA n 1 45 SER n 1 46 LEU n 1 47 THR n 1 48 ILE n 1 49 THR n 1 50 GLY n 1 51 ALA n 1 52 GLN n 1 53 ALA n 1 54 GLU n 1 55 ASP n 1 56 GLU n 1 57 ALA n 1 58 ASP n 1 59 TYR n 1 60 TYR n 1 61 CYS n 1 62 ASN n 1 63 SER n 1 64 ARG n 1 65 ASP n 1 66 SER n 1 67 SER n 1 68 ALA n 1 69 ASN n 1 70 HIS n 1 71 GLN n 1 72 VAL n 1 73 PHE n 1 74 GLY n 1 75 GLY n 1 76 GLY n 1 77 THR n 1 78 LYS n 1 79 LEU n 1 80 THR n 1 81 VAL n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num 1 _entity_src_nat.pdbx_end_seq_num 81 _entity_src_nat.common_name Human _entity_src_nat.pdbx_organism_scientific 'Homo sapiens' _entity_src_nat.pdbx_ncbi_taxonomy_id 9606 _entity_src_nat.genus ? _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue 'heart muscle' _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ Heart _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 6Z1I _struct_ref.pdbx_db_accession 6Z1I _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 6Z1I D 1 ? 81 ? 6Z1I 9 ? 107 ? 9 107 2 1 6Z1I E 1 ? 81 ? 6Z1I 9 ? 107 ? 9 107 3 1 6Z1I F 1 ? 81 ? 6Z1I 9 ? 107 ? 9 107 4 1 6Z1I C 1 ? 81 ? 6Z1I 9 ? 107 ? 9 107 5 1 6Z1I B 1 ? 81 ? 6Z1I 9 ? 107 ? 9 107 6 1 6Z1I A 1 ? 81 ? 6Z1I 9 ? 107 ? 9 107 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6Z1I _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _struct.entry_id 6Z1I _struct.title 'AL amyloid fibril from a lambda 3 light chain in conformation B' _struct.pdbx_descriptor 'lambda 3 light chain fragment, residues 2-116' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6Z1I _struct_keywords.text 'amyloid fibril, antibody, beta sheet, heart, PROTEIN FIBRIL' _struct_keywords.pdbx_keywords 'PROTEIN FIBRIL' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 1 ? E N N 1 ? F N N 1 ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 14 SG ? ? ? 1_555 A CYS 61 SG ? ? D CYS 22 D CYS 87 1_555 ? ? ? ? ? ? ? 1.989 ? ? disulf2 disulf ? ? B CYS 14 SG ? ? ? 1_555 B CYS 61 SG ? ? E CYS 22 E CYS 87 1_555 ? ? ? ? ? ? ? 1.988 ? ? disulf3 disulf ? ? C CYS 14 SG ? ? ? 1_555 C CYS 61 SG ? ? F CYS 22 F CYS 87 1_555 ? ? ? ? ? ? ? 1.989 ? ? disulf4 disulf ? ? D CYS 14 SG ? ? ? 1_555 D CYS 61 SG ? ? C CYS 22 C CYS 87 1_555 ? ? ? ? ? ? ? 1.989 ? ? disulf5 disulf ? ? E CYS 14 SG ? ? ? 1_555 E CYS 61 SG ? ? B CYS 22 B CYS 87 1_555 ? ? ? ? ? ? ? 1.989 ? ? disulf6 disulf ? ? F CYS 14 SG ? ? ? 1_555 F CYS 61 SG ? ? A CYS 22 A CYS 87 1_555 ? ? ? ? ? ? ? 1.989 ? ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 6 ? AA2 ? 6 ? AA3 ? 6 ? AA4 ? 6 ? AA5 ? 6 ? AA6 ? 6 ? AA9 ? 6 ? AB1 ? 6 ? AB2 ? 6 ? AB3 ? 6 ? AB4 ? 6 ? AB5 ? 6 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? parallel AA1 2 3 ? parallel AA1 3 4 ? parallel AA1 4 5 ? parallel AA1 5 6 ? parallel AA2 1 2 ? parallel AA2 2 3 ? parallel AA2 3 4 ? parallel AA2 4 5 ? parallel AA2 5 6 ? parallel AA3 1 2 ? parallel AA3 2 3 ? parallel AA3 3 4 ? parallel AA3 4 5 ? parallel AA3 5 6 ? parallel AA4 1 2 ? parallel AA4 2 3 ? parallel AA4 3 4 ? parallel AA4 4 5 ? parallel AA4 5 6 ? parallel AA5 1 2 ? parallel AA5 2 3 ? parallel AA5 3 4 ? parallel AA5 4 5 ? parallel AA5 5 6 ? parallel AA6 1 2 ? parallel AA6 2 3 ? parallel AA6 3 4 ? parallel AA6 4 5 ? parallel AA6 5 6 ? parallel AA9 1 2 ? parallel AA9 2 3 ? parallel AA9 3 4 ? parallel AA9 4 5 ? parallel AA9 5 6 ? parallel AB1 1 2 ? parallel AB1 2 3 ? parallel AB1 3 4 ? parallel AB1 4 5 ? parallel AB1 5 6 ? parallel AB2 1 2 ? parallel AB2 2 3 ? parallel AB2 3 4 ? parallel AB2 4 5 ? parallel AB2 5 6 ? parallel AB3 1 2 ? parallel AB3 2 3 ? parallel AB3 3 4 ? parallel AB3 4 5 ? parallel AB3 5 6 ? parallel AB4 1 2 ? parallel AB4 2 3 ? parallel AB4 3 4 ? parallel AB4 4 5 ? parallel AB4 5 6 ? parallel AB5 1 2 ? parallel AB5 2 3 ? parallel AB5 3 4 ? parallel AB5 4 5 ? parallel AB5 5 6 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 VAL F 2 ? LEU F 6 ? VAL A 10 LEU A 14 AA1 2 VAL E 2 ? LEU E 6 ? VAL B 10 LEU B 14 AA1 3 VAL D 2 ? LEU D 6 ? VAL C 10 LEU C 14 AA1 4 VAL A 2 ? LEU A 6 ? VAL D 10 LEU D 14 AA1 5 VAL B 2 ? LEU B 6 ? VAL E 10 LEU E 14 AA1 6 VAL C 2 ? LEU C 6 ? VAL F 10 LEU F 14 AA2 1 THR F 9 ? GLN F 15 ? THR A 17 GLN A 23 AA2 2 THR E 9 ? GLN E 15 ? THR B 17 GLN B 23 AA2 3 THR D 9 ? GLN D 15 ? THR C 17 GLN C 23 AA2 4 THR A 9 ? GLN A 15 ? THR D 17 GLN D 23 AA2 5 THR B 9 ? GLN B 15 ? THR E 17 GLN E 23 AA2 6 THR C 9 ? GLN C 15 ? THR F 17 GLN F 23 AA3 1 ASP F 17 ? SER F 18 ? ASP A 25 SER A 26 AA3 2 ASP E 17 ? SER E 18 ? ASP B 25 SER B 26 AA3 3 ASP D 17 ? SER D 18 ? ASP C 25 SER C 26 AA3 4 ASP A 17 ? SER A 18 ? ASP D 25 SER D 26 AA3 5 ASP B 17 ? SER B 18 ? ASP E 25 SER E 26 AA3 6 ASP C 17 ? SER C 18 ? ASP F 25 SER F 26 AA4 1 ARG F 20 ? SER F 23 ? ARG A 28 SER A 31 AA4 2 ARG E 20 ? SER E 23 ? ARG B 28 SER B 31 AA4 3 ARG D 20 ? SER D 23 ? ARG C 28 SER C 31 AA4 4 ARG A 20 ? SER A 23 ? ARG D 28 SER D 31 AA4 5 ARG B 20 ? SER B 23 ? ARG E 28 SER E 31 AA4 6 ARG C 20 ? SER C 23 ? ARG F 28 SER F 31 AA5 1 TRP F 26 ? GLN F 29 ? TRP A 34 GLN A 37 AA5 2 TRP E 26 ? GLN E 29 ? TRP B 34 GLN B 37 AA5 3 TRP D 26 ? GLN D 29 ? TRP C 34 GLN C 37 AA5 4 TRP A 26 ? GLN A 29 ? TRP D 34 GLN D 37 AA5 5 TRP B 26 ? GLN B 29 ? TRP E 34 GLN E 37 AA5 6 TRP C 26 ? GLN C 29 ? TRP F 34 GLN F 37 AA6 1 PRO F 35 ? ILE F 39 ? PRO A 43 ILE A 47 AA6 2 PRO E 35 ? ILE E 39 ? PRO B 43 ILE B 47 AA6 3 PRO D 35 ? ILE D 39 ? PRO C 43 ILE C 47 AA6 4 PRO A 35 ? ILE A 39 ? PRO D 43 ILE D 47 AA6 5 PRO B 35 ? ILE B 39 ? PRO E 43 ILE E 47 AA6 6 PRO C 35 ? ILE C 39 ? PRO F 43 ILE F 47 AA9 1 LEU F 46 ? THR F 49 ? LEU A 72 THR A 75 AA9 2 LEU E 46 ? THR E 49 ? LEU B 72 THR B 75 AA9 3 LEU D 46 ? THR D 49 ? LEU C 72 THR C 75 AA9 4 LEU A 46 ? THR A 49 ? LEU D 72 THR D 75 AA9 5 LEU B 46 ? THR B 49 ? LEU E 72 THR E 75 AA9 6 LEU C 46 ? THR C 49 ? LEU F 72 THR F 75 AB1 1 ALA F 53 ? GLU F 56 ? ALA A 79 GLU A 82 AB1 2 ALA E 53 ? GLU E 56 ? ALA B 79 GLU B 82 AB1 3 ALA D 53 ? GLU D 56 ? ALA C 79 GLU C 82 AB1 4 ALA A 53 ? GLU A 56 ? ALA D 79 GLU D 82 AB1 5 ALA B 53 ? GLU B 56 ? ALA E 79 GLU E 82 AB1 6 ALA C 53 ? GLU C 56 ? ALA F 79 GLU F 82 AB2 1 TYR F 59 ? TYR F 60 ? TYR A 85 TYR A 86 AB2 2 TYR E 59 ? TYR E 60 ? TYR B 85 TYR B 86 AB2 3 TYR D 59 ? TYR D 60 ? TYR C 85 TYR C 86 AB2 4 TYR A 59 ? TYR A 60 ? TYR D 85 TYR D 86 AB2 5 TYR B 59 ? TYR B 60 ? TYR E 85 TYR E 86 AB2 6 TYR C 59 ? TYR C 60 ? TYR F 85 TYR F 86 AB3 1 ASN F 62 ? ASP F 65 ? ASN A 88 ASP A 91 AB3 2 ASN E 62 ? ASP E 65 ? ASN B 88 ASP B 91 AB3 3 ASN D 62 ? ASP D 65 ? ASN C 88 ASP C 91 AB3 4 ASN A 62 ? ASP A 65 ? ASN D 88 ASP D 91 AB3 5 ASN B 62 ? ASP B 65 ? ASN E 88 ASP E 91 AB3 6 ASN C 62 ? ASP C 65 ? ASN F 88 ASP F 91 AB4 1 ASN F 69 ? GLN F 71 ? ASN A 95 GLN A 97 AB4 2 ASN E 69 ? GLN E 71 ? ASN B 95 GLN B 97 AB4 3 ASN D 69 ? GLN D 71 ? ASN C 95 GLN C 97 AB4 4 ASN A 69 ? GLN A 71 ? ASN D 95 GLN D 97 AB4 5 ASN B 69 ? GLN B 71 ? ASN E 95 GLN E 97 AB4 6 ASN C 69 ? GLN C 71 ? ASN F 95 GLN F 97 AB5 1 THR F 77 ? THR F 80 ? THR A 103 THR A 106 AB5 2 THR E 77 ? THR E 80 ? THR B 103 THR B 106 AB5 3 THR D 77 ? THR D 80 ? THR C 103 THR C 106 AB5 4 THR A 77 ? THR A 80 ? THR D 103 THR D 106 AB5 5 THR B 77 ? THR B 80 ? THR E 103 THR E 106 AB5 6 THR C 77 ? THR C 80 ? THR F 103 THR F 106 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N SER F 3 ? N SER A 11 O VAL E 2 ? O VAL B 10 AA1 2 3 N SER E 3 ? N SER B 11 O VAL D 2 ? O VAL C 10 AA1 3 4 N SER D 3 ? N SER C 11 O VAL A 2 ? O VAL D 10 AA1 4 5 N SER A 3 ? N SER D 11 O VAL B 2 ? O VAL E 10 AA1 5 6 N SER B 3 ? N SER E 11 O VAL C 2 ? O VAL F 10 AA2 1 2 N ARG F 11 ? N ARG A 19 O VAL E 10 ? O VAL B 18 AA2 2 3 N ARG E 11 ? N ARG B 19 O VAL D 10 ? O VAL C 18 AA2 3 4 N ARG D 11 ? N ARG C 19 O VAL A 10 ? O VAL D 18 AA2 4 5 N ARG A 11 ? N ARG D 19 O VAL B 10 ? O VAL E 18 AA2 5 6 N ARG B 11 ? N ARG E 19 O VAL C 10 ? O VAL F 18 AA3 1 2 N SER F 18 ? N SER A 26 O ASP E 17 ? O ASP B 25 AA3 2 3 N SER E 18 ? N SER B 26 O ASP D 17 ? O ASP C 25 AA3 3 4 N SER D 18 ? N SER C 26 O ASP A 17 ? O ASP D 25 AA3 4 5 N SER A 18 ? N SER D 26 O ASP B 17 ? O ASP E 25 AA3 5 6 N SER B 18 ? N SER E 26 O ASP C 17 ? O ASP F 25 AA4 1 2 N SER F 21 ? N SER A 29 O ARG E 20 ? O ARG B 28 AA4 2 3 N SER E 21 ? N SER B 29 O ARG D 20 ? O ARG C 28 AA4 3 4 N SER D 21 ? N SER C 29 O ARG A 20 ? O ARG D 28 AA4 4 5 N SER A 21 ? N SER D 29 O ARG B 20 ? O ARG E 28 AA4 5 6 N SER B 21 ? N SER E 29 O ARG C 20 ? O ARG F 28 AA5 1 2 N TYR F 27 ? N TYR A 35 O TRP E 26 ? O TRP B 34 AA5 2 3 N TYR E 27 ? N TYR B 35 O TRP D 26 ? O TRP C 34 AA5 3 4 N TYR D 27 ? N TYR C 35 O TRP A 26 ? O TRP D 34 AA5 4 5 N TYR A 27 ? N TYR D 35 O TRP B 26 ? O TRP E 34 AA5 5 6 N TYR B 27 ? N TYR E 35 O TRP C 26 ? O TRP F 34 AA6 1 2 N VAL F 36 ? N VAL A 44 O PRO E 35 ? O PRO B 43 AA6 2 3 N VAL E 36 ? N VAL B 44 O PRO D 35 ? O PRO C 43 AA6 3 4 N VAL D 36 ? N VAL C 44 O PRO A 35 ? O PRO D 43 AA6 4 5 N VAL A 36 ? N VAL D 44 O PRO B 35 ? O PRO E 43 AA6 5 6 N VAL B 36 ? N VAL E 44 O PRO C 35 ? O PRO F 43 AA9 1 2 N THR F 47 ? N THR A 73 O LEU E 46 ? O LEU B 72 AA9 2 3 N THR E 47 ? N THR B 73 O LEU D 46 ? O LEU C 72 AA9 3 4 N THR D 47 ? N THR C 73 O LEU A 46 ? O LEU D 72 AA9 4 5 N THR A 47 ? N THR D 73 O LEU B 46 ? O LEU E 72 AA9 5 6 N THR B 47 ? N THR E 73 O LEU C 46 ? O LEU F 72 AB1 1 2 N GLU F 54 ? N GLU A 80 O ALA E 53 ? O ALA B 79 AB1 2 3 N GLU E 54 ? N GLU B 80 O ALA D 53 ? O ALA C 79 AB1 3 4 N GLU D 54 ? N GLU C 80 O ALA A 53 ? O ALA D 79 AB1 4 5 N GLU A 54 ? N GLU D 80 O ALA B 53 ? O ALA E 79 AB1 5 6 N GLU B 54 ? N GLU E 80 O ALA C 53 ? O ALA F 79 AB2 1 2 N TYR E 60 ? N TYR B 86 O TYR F 59 ? O TYR A 85 AB2 2 3 N TYR D 60 ? N TYR C 86 O TYR E 59 ? O TYR B 85 AB2 3 4 N TYR A 60 ? N TYR D 86 O TYR D 59 ? O TYR C 85 AB2 4 5 N TYR B 60 ? N TYR E 86 O TYR A 59 ? O TYR D 85 AB2 5 6 N TYR C 60 ? N TYR F 86 O TYR B 59 ? O TYR E 85 AB3 1 2 N ARG F 64 ? N ARG A 90 O SER E 63 ? O SER B 89 AB3 2 3 N ARG E 64 ? N ARG B 90 O SER D 63 ? O SER C 89 AB3 3 4 N ARG D 64 ? N ARG C 90 O SER A 63 ? O SER D 89 AB3 4 5 N ARG A 64 ? N ARG D 90 O SER B 63 ? O SER E 89 AB3 5 6 N ARG B 64 ? N ARG E 90 O SER C 63 ? O SER F 89 AB4 1 2 N GLN F 71 ? N GLN A 97 O HIS E 70 ? O HIS B 96 AB4 2 3 N GLN E 71 ? N GLN B 97 O HIS D 70 ? O HIS C 96 AB4 3 4 N GLN D 71 ? N GLN C 97 O HIS A 70 ? O HIS D 96 AB4 4 5 N GLN A 71 ? N GLN D 97 O HIS B 70 ? O HIS E 96 AB4 5 6 N GLN B 71 ? N GLN E 97 O HIS C 70 ? O HIS F 96 AB5 1 2 N LYS F 78 ? N LYS A 104 O THR E 77 ? O THR B 103 AB5 2 3 N LYS E 78 ? N LYS B 104 O THR D 77 ? O THR C 103 AB5 3 4 N LYS D 78 ? N LYS C 104 O THR A 77 ? O THR D 103 AB5 4 5 N LYS A 78 ? N LYS D 104 O THR B 77 ? O THR E 103 AB5 5 6 N LYS B 78 ? N LYS E 104 O THR C 77 ? O THR F 103 # _atom_sites.entry_id 6Z1I _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 9 9 ALA ALA D . n A 1 2 VAL 2 10 10 VAL VAL D . n A 1 3 SER 3 11 11 SER SER D . n A 1 4 VAL 4 12 12 VAL VAL D . n A 1 5 ALA 5 13 13 ALA ALA D . n A 1 6 LEU 6 14 14 LEU LEU D . n A 1 7 GLY 7 15 15 GLY GLY D . n A 1 8 GLN 8 16 16 GLN GLN D . n A 1 9 THR 9 17 17 THR THR D . n A 1 10 VAL 10 18 18 VAL VAL D . n A 1 11 ARG 11 19 19 ARG ARG D . n A 1 12 ILE 12 20 20 ILE ILE D . n A 1 13 THR 13 21 21 THR THR D . n A 1 14 CYS 14 22 22 CYS CYS D . n A 1 15 GLN 15 23 23 GLN GLN D . n A 1 16 GLY 16 24 24 GLY GLY D . n A 1 17 ASP 17 25 25 ASP ASP D . n A 1 18 SER 18 26 26 SER SER D . n A 1 19 LEU 19 27 27 LEU LEU D . n A 1 20 ARG 20 28 28 ARG ARG D . n A 1 21 SER 21 29 29 SER SER D . n A 1 22 TYR 22 30 30 TYR TYR D . n A 1 23 SER 23 31 31 SER SER D . n A 1 24 ALA 24 32 32 ALA ALA D . n A 1 25 SER 25 33 33 SER SER D . n A 1 26 TRP 26 34 34 TRP TRP D . n A 1 27 TYR 27 35 35 TYR TYR D . n A 1 28 GLN 28 36 36 GLN GLN D . n A 1 29 GLN 29 37 37 GLN GLN D . n A 1 30 LYS 30 38 38 LYS LYS D . n A 1 31 PRO 31 39 39 PRO PRO D . n A 1 32 GLY 32 40 40 GLY GLY D . n A 1 33 GLN 33 41 41 GLN GLN D . n A 1 34 ALA 34 42 42 ALA ALA D . n A 1 35 PRO 35 43 43 PRO PRO D . n A 1 36 VAL 36 44 44 VAL VAL D . n A 1 37 LEU 37 45 45 LEU LEU D . n A 1 38 VAL 38 46 46 VAL VAL D . n A 1 39 ILE 39 47 47 ILE ILE D . n A 1 40 PHE 40 48 48 PHE PHE D . n A 1 41 ARG 41 49 49 ARG ARG D . n A 1 42 ASN 42 68 68 ASN ASN D . n A 1 43 THR 43 69 69 THR THR D . n A 1 44 ALA 44 70 70 ALA ALA D . n A 1 45 SER 45 71 71 SER SER D . n A 1 46 LEU 46 72 72 LEU LEU D . n A 1 47 THR 47 73 73 THR THR D . n A 1 48 ILE 48 74 74 ILE ILE D . n A 1 49 THR 49 75 75 THR THR D . n A 1 50 GLY 50 76 76 GLY GLY D . n A 1 51 ALA 51 77 77 ALA ALA D . n A 1 52 GLN 52 78 78 GLN GLN D . n A 1 53 ALA 53 79 79 ALA ALA D . n A 1 54 GLU 54 80 80 GLU GLU D . n A 1 55 ASP 55 81 81 ASP ASP D . n A 1 56 GLU 56 82 82 GLU GLU D . n A 1 57 ALA 57 83 83 ALA ALA D . n A 1 58 ASP 58 84 84 ASP ASP D . n A 1 59 TYR 59 85 85 TYR TYR D . n A 1 60 TYR 60 86 86 TYR TYR D . n A 1 61 CYS 61 87 87 CYS CYS D . n A 1 62 ASN 62 88 88 ASN ASN D . n A 1 63 SER 63 89 89 SER SER D . n A 1 64 ARG 64 90 90 ARG ARG D . n A 1 65 ASP 65 91 91 ASP ASP D . n A 1 66 SER 66 92 92 SER SER D . n A 1 67 SER 67 93 93 SER SER D . n A 1 68 ALA 68 94 94 ALA ALA D . n A 1 69 ASN 69 95 95 ASN ASN D . n A 1 70 HIS 70 96 96 HIS HIS D . n A 1 71 GLN 71 97 97 GLN GLN D . n A 1 72 VAL 72 98 98 VAL VAL D . n A 1 73 PHE 73 99 99 PHE PHE D . n A 1 74 GLY 74 100 100 GLY GLY D . n A 1 75 GLY 75 101 101 GLY GLY D . n A 1 76 GLY 76 102 102 GLY GLY D . n A 1 77 THR 77 103 103 THR THR D . n A 1 78 LYS 78 104 104 LYS LYS D . n A 1 79 LEU 79 105 105 LEU LEU D . n A 1 80 THR 80 106 106 THR THR D . n A 1 81 VAL 81 107 107 VAL VAL D . n B 1 1 ALA 1 9 9 ALA ALA E . n B 1 2 VAL 2 10 10 VAL VAL E . n B 1 3 SER 3 11 11 SER SER E . n B 1 4 VAL 4 12 12 VAL VAL E . n B 1 5 ALA 5 13 13 ALA ALA E . n B 1 6 LEU 6 14 14 LEU LEU E . n B 1 7 GLY 7 15 15 GLY GLY E . n B 1 8 GLN 8 16 16 GLN GLN E . n B 1 9 THR 9 17 17 THR THR E . n B 1 10 VAL 10 18 18 VAL VAL E . n B 1 11 ARG 11 19 19 ARG ARG E . n B 1 12 ILE 12 20 20 ILE ILE E . n B 1 13 THR 13 21 21 THR THR E . n B 1 14 CYS 14 22 22 CYS CYS E . n B 1 15 GLN 15 23 23 GLN GLN E . n B 1 16 GLY 16 24 24 GLY GLY E . n B 1 17 ASP 17 25 25 ASP ASP E . n B 1 18 SER 18 26 26 SER SER E . n B 1 19 LEU 19 27 27 LEU LEU E . n B 1 20 ARG 20 28 28 ARG ARG E . n B 1 21 SER 21 29 29 SER SER E . n B 1 22 TYR 22 30 30 TYR TYR E . n B 1 23 SER 23 31 31 SER SER E . n B 1 24 ALA 24 32 32 ALA ALA E . n B 1 25 SER 25 33 33 SER SER E . n B 1 26 TRP 26 34 34 TRP TRP E . n B 1 27 TYR 27 35 35 TYR TYR E . n B 1 28 GLN 28 36 36 GLN GLN E . n B 1 29 GLN 29 37 37 GLN GLN E . n B 1 30 LYS 30 38 38 LYS LYS E . n B 1 31 PRO 31 39 39 PRO PRO E . n B 1 32 GLY 32 40 40 GLY GLY E . n B 1 33 GLN 33 41 41 GLN GLN E . n B 1 34 ALA 34 42 42 ALA ALA E . n B 1 35 PRO 35 43 43 PRO PRO E . n B 1 36 VAL 36 44 44 VAL VAL E . n B 1 37 LEU 37 45 45 LEU LEU E . n B 1 38 VAL 38 46 46 VAL VAL E . n B 1 39 ILE 39 47 47 ILE ILE E . n B 1 40 PHE 40 48 48 PHE PHE E . n B 1 41 ARG 41 49 49 ARG ARG E . n B 1 42 ASN 42 68 68 ASN ASN E . n B 1 43 THR 43 69 69 THR THR E . n B 1 44 ALA 44 70 70 ALA ALA E . n B 1 45 SER 45 71 71 SER SER E . n B 1 46 LEU 46 72 72 LEU LEU E . n B 1 47 THR 47 73 73 THR THR E . n B 1 48 ILE 48 74 74 ILE ILE E . n B 1 49 THR 49 75 75 THR THR E . n B 1 50 GLY 50 76 76 GLY GLY E . n B 1 51 ALA 51 77 77 ALA ALA E . n B 1 52 GLN 52 78 78 GLN GLN E . n B 1 53 ALA 53 79 79 ALA ALA E . n B 1 54 GLU 54 80 80 GLU GLU E . n B 1 55 ASP 55 81 81 ASP ASP E . n B 1 56 GLU 56 82 82 GLU GLU E . n B 1 57 ALA 57 83 83 ALA ALA E . n B 1 58 ASP 58 84 84 ASP ASP E . n B 1 59 TYR 59 85 85 TYR TYR E . n B 1 60 TYR 60 86 86 TYR TYR E . n B 1 61 CYS 61 87 87 CYS CYS E . n B 1 62 ASN 62 88 88 ASN ASN E . n B 1 63 SER 63 89 89 SER SER E . n B 1 64 ARG 64 90 90 ARG ARG E . n B 1 65 ASP 65 91 91 ASP ASP E . n B 1 66 SER 66 92 92 SER SER E . n B 1 67 SER 67 93 93 SER SER E . n B 1 68 ALA 68 94 94 ALA ALA E . n B 1 69 ASN 69 95 95 ASN ASN E . n B 1 70 HIS 70 96 96 HIS HIS E . n B 1 71 GLN 71 97 97 GLN GLN E . n B 1 72 VAL 72 98 98 VAL VAL E . n B 1 73 PHE 73 99 99 PHE PHE E . n B 1 74 GLY 74 100 100 GLY GLY E . n B 1 75 GLY 75 101 101 GLY GLY E . n B 1 76 GLY 76 102 102 GLY GLY E . n B 1 77 THR 77 103 103 THR THR E . n B 1 78 LYS 78 104 104 LYS LYS E . n B 1 79 LEU 79 105 105 LEU LEU E . n B 1 80 THR 80 106 106 THR THR E . n B 1 81 VAL 81 107 107 VAL VAL E . n C 1 1 ALA 1 9 9 ALA ALA F . n C 1 2 VAL 2 10 10 VAL VAL F . n C 1 3 SER 3 11 11 SER SER F . n C 1 4 VAL 4 12 12 VAL VAL F . n C 1 5 ALA 5 13 13 ALA ALA F . n C 1 6 LEU 6 14 14 LEU LEU F . n C 1 7 GLY 7 15 15 GLY GLY F . n C 1 8 GLN 8 16 16 GLN GLN F . n C 1 9 THR 9 17 17 THR THR F . n C 1 10 VAL 10 18 18 VAL VAL F . n C 1 11 ARG 11 19 19 ARG ARG F . n C 1 12 ILE 12 20 20 ILE ILE F . n C 1 13 THR 13 21 21 THR THR F . n C 1 14 CYS 14 22 22 CYS CYS F . n C 1 15 GLN 15 23 23 GLN GLN F . n C 1 16 GLY 16 24 24 GLY GLY F . n C 1 17 ASP 17 25 25 ASP ASP F . n C 1 18 SER 18 26 26 SER SER F . n C 1 19 LEU 19 27 27 LEU LEU F . n C 1 20 ARG 20 28 28 ARG ARG F . n C 1 21 SER 21 29 29 SER SER F . n C 1 22 TYR 22 30 30 TYR TYR F . n C 1 23 SER 23 31 31 SER SER F . n C 1 24 ALA 24 32 32 ALA ALA F . n C 1 25 SER 25 33 33 SER SER F . n C 1 26 TRP 26 34 34 TRP TRP F . n C 1 27 TYR 27 35 35 TYR TYR F . n C 1 28 GLN 28 36 36 GLN GLN F . n C 1 29 GLN 29 37 37 GLN GLN F . n C 1 30 LYS 30 38 38 LYS LYS F . n C 1 31 PRO 31 39 39 PRO PRO F . n C 1 32 GLY 32 40 40 GLY GLY F . n C 1 33 GLN 33 41 41 GLN GLN F . n C 1 34 ALA 34 42 42 ALA ALA F . n C 1 35 PRO 35 43 43 PRO PRO F . n C 1 36 VAL 36 44 44 VAL VAL F . n C 1 37 LEU 37 45 45 LEU LEU F . n C 1 38 VAL 38 46 46 VAL VAL F . n C 1 39 ILE 39 47 47 ILE ILE F . n C 1 40 PHE 40 48 48 PHE PHE F . n C 1 41 ARG 41 49 49 ARG ARG F . n C 1 42 ASN 42 68 68 ASN ASN F . n C 1 43 THR 43 69 69 THR THR F . n C 1 44 ALA 44 70 70 ALA ALA F . n C 1 45 SER 45 71 71 SER SER F . n C 1 46 LEU 46 72 72 LEU LEU F . n C 1 47 THR 47 73 73 THR THR F . n C 1 48 ILE 48 74 74 ILE ILE F . n C 1 49 THR 49 75 75 THR THR F . n C 1 50 GLY 50 76 76 GLY GLY F . n C 1 51 ALA 51 77 77 ALA ALA F . n C 1 52 GLN 52 78 78 GLN GLN F . n C 1 53 ALA 53 79 79 ALA ALA F . n C 1 54 GLU 54 80 80 GLU GLU F . n C 1 55 ASP 55 81 81 ASP ASP F . n C 1 56 GLU 56 82 82 GLU GLU F . n C 1 57 ALA 57 83 83 ALA ALA F . n C 1 58 ASP 58 84 84 ASP ASP F . n C 1 59 TYR 59 85 85 TYR TYR F . n C 1 60 TYR 60 86 86 TYR TYR F . n C 1 61 CYS 61 87 87 CYS CYS F . n C 1 62 ASN 62 88 88 ASN ASN F . n C 1 63 SER 63 89 89 SER SER F . n C 1 64 ARG 64 90 90 ARG ARG F . n C 1 65 ASP 65 91 91 ASP ASP F . n C 1 66 SER 66 92 92 SER SER F . n C 1 67 SER 67 93 93 SER SER F . n C 1 68 ALA 68 94 94 ALA ALA F . n C 1 69 ASN 69 95 95 ASN ASN F . n C 1 70 HIS 70 96 96 HIS HIS F . n C 1 71 GLN 71 97 97 GLN GLN F . n C 1 72 VAL 72 98 98 VAL VAL F . n C 1 73 PHE 73 99 99 PHE PHE F . n C 1 74 GLY 74 100 100 GLY GLY F . n C 1 75 GLY 75 101 101 GLY GLY F . n C 1 76 GLY 76 102 102 GLY GLY F . n C 1 77 THR 77 103 103 THR THR F . n C 1 78 LYS 78 104 104 LYS LYS F . n C 1 79 LEU 79 105 105 LEU LEU F . n C 1 80 THR 80 106 106 THR THR F . n C 1 81 VAL 81 107 107 VAL VAL F . n D 1 1 ALA 1 9 9 ALA ALA C . n D 1 2 VAL 2 10 10 VAL VAL C . n D 1 3 SER 3 11 11 SER SER C . n D 1 4 VAL 4 12 12 VAL VAL C . n D 1 5 ALA 5 13 13 ALA ALA C . n D 1 6 LEU 6 14 14 LEU LEU C . n D 1 7 GLY 7 15 15 GLY GLY C . n D 1 8 GLN 8 16 16 GLN GLN C . n D 1 9 THR 9 17 17 THR THR C . n D 1 10 VAL 10 18 18 VAL VAL C . n D 1 11 ARG 11 19 19 ARG ARG C . n D 1 12 ILE 12 20 20 ILE ILE C . n D 1 13 THR 13 21 21 THR THR C . n D 1 14 CYS 14 22 22 CYS CYS C . n D 1 15 GLN 15 23 23 GLN GLN C . n D 1 16 GLY 16 24 24 GLY GLY C . n D 1 17 ASP 17 25 25 ASP ASP C . n D 1 18 SER 18 26 26 SER SER C . n D 1 19 LEU 19 27 27 LEU LEU C . n D 1 20 ARG 20 28 28 ARG ARG C . n D 1 21 SER 21 29 29 SER SER C . n D 1 22 TYR 22 30 30 TYR TYR C . n D 1 23 SER 23 31 31 SER SER C . n D 1 24 ALA 24 32 32 ALA ALA C . n D 1 25 SER 25 33 33 SER SER C . n D 1 26 TRP 26 34 34 TRP TRP C . n D 1 27 TYR 27 35 35 TYR TYR C . n D 1 28 GLN 28 36 36 GLN GLN C . n D 1 29 GLN 29 37 37 GLN GLN C . n D 1 30 LYS 30 38 38 LYS LYS C . n D 1 31 PRO 31 39 39 PRO PRO C . n D 1 32 GLY 32 40 40 GLY GLY C . n D 1 33 GLN 33 41 41 GLN GLN C . n D 1 34 ALA 34 42 42 ALA ALA C . n D 1 35 PRO 35 43 43 PRO PRO C . n D 1 36 VAL 36 44 44 VAL VAL C . n D 1 37 LEU 37 45 45 LEU LEU C . n D 1 38 VAL 38 46 46 VAL VAL C . n D 1 39 ILE 39 47 47 ILE ILE C . n D 1 40 PHE 40 48 48 PHE PHE C . n D 1 41 ARG 41 49 49 ARG ARG C . n D 1 42 ASN 42 68 68 ASN ASN C . n D 1 43 THR 43 69 69 THR THR C . n D 1 44 ALA 44 70 70 ALA ALA C . n D 1 45 SER 45 71 71 SER SER C . n D 1 46 LEU 46 72 72 LEU LEU C . n D 1 47 THR 47 73 73 THR THR C . n D 1 48 ILE 48 74 74 ILE ILE C . n D 1 49 THR 49 75 75 THR THR C . n D 1 50 GLY 50 76 76 GLY GLY C . n D 1 51 ALA 51 77 77 ALA ALA C . n D 1 52 GLN 52 78 78 GLN GLN C . n D 1 53 ALA 53 79 79 ALA ALA C . n D 1 54 GLU 54 80 80 GLU GLU C . n D 1 55 ASP 55 81 81 ASP ASP C . n D 1 56 GLU 56 82 82 GLU GLU C . n D 1 57 ALA 57 83 83 ALA ALA C . n D 1 58 ASP 58 84 84 ASP ASP C . n D 1 59 TYR 59 85 85 TYR TYR C . n D 1 60 TYR 60 86 86 TYR TYR C . n D 1 61 CYS 61 87 87 CYS CYS C . n D 1 62 ASN 62 88 88 ASN ASN C . n D 1 63 SER 63 89 89 SER SER C . n D 1 64 ARG 64 90 90 ARG ARG C . n D 1 65 ASP 65 91 91 ASP ASP C . n D 1 66 SER 66 92 92 SER SER C . n D 1 67 SER 67 93 93 SER SER C . n D 1 68 ALA 68 94 94 ALA ALA C . n D 1 69 ASN 69 95 95 ASN ASN C . n D 1 70 HIS 70 96 96 HIS HIS C . n D 1 71 GLN 71 97 97 GLN GLN C . n D 1 72 VAL 72 98 98 VAL VAL C . n D 1 73 PHE 73 99 99 PHE PHE C . n D 1 74 GLY 74 100 100 GLY GLY C . n D 1 75 GLY 75 101 101 GLY GLY C . n D 1 76 GLY 76 102 102 GLY GLY C . n D 1 77 THR 77 103 103 THR THR C . n D 1 78 LYS 78 104 104 LYS LYS C . n D 1 79 LEU 79 105 105 LEU LEU C . n D 1 80 THR 80 106 106 THR THR C . n D 1 81 VAL 81 107 107 VAL VAL C . n E 1 1 ALA 1 9 9 ALA ALA B . n E 1 2 VAL 2 10 10 VAL VAL B . n E 1 3 SER 3 11 11 SER SER B . n E 1 4 VAL 4 12 12 VAL VAL B . n E 1 5 ALA 5 13 13 ALA ALA B . n E 1 6 LEU 6 14 14 LEU LEU B . n E 1 7 GLY 7 15 15 GLY GLY B . n E 1 8 GLN 8 16 16 GLN GLN B . n E 1 9 THR 9 17 17 THR THR B . n E 1 10 VAL 10 18 18 VAL VAL B . n E 1 11 ARG 11 19 19 ARG ARG B . n E 1 12 ILE 12 20 20 ILE ILE B . n E 1 13 THR 13 21 21 THR THR B . n E 1 14 CYS 14 22 22 CYS CYS B . n E 1 15 GLN 15 23 23 GLN GLN B . n E 1 16 GLY 16 24 24 GLY GLY B . n E 1 17 ASP 17 25 25 ASP ASP B . n E 1 18 SER 18 26 26 SER SER B . n E 1 19 LEU 19 27 27 LEU LEU B . n E 1 20 ARG 20 28 28 ARG ARG B . n E 1 21 SER 21 29 29 SER SER B . n E 1 22 TYR 22 30 30 TYR TYR B . n E 1 23 SER 23 31 31 SER SER B . n E 1 24 ALA 24 32 32 ALA ALA B . n E 1 25 SER 25 33 33 SER SER B . n E 1 26 TRP 26 34 34 TRP TRP B . n E 1 27 TYR 27 35 35 TYR TYR B . n E 1 28 GLN 28 36 36 GLN GLN B . n E 1 29 GLN 29 37 37 GLN GLN B . n E 1 30 LYS 30 38 38 LYS LYS B . n E 1 31 PRO 31 39 39 PRO PRO B . n E 1 32 GLY 32 40 40 GLY GLY B . n E 1 33 GLN 33 41 41 GLN GLN B . n E 1 34 ALA 34 42 42 ALA ALA B . n E 1 35 PRO 35 43 43 PRO PRO B . n E 1 36 VAL 36 44 44 VAL VAL B . n E 1 37 LEU 37 45 45 LEU LEU B . n E 1 38 VAL 38 46 46 VAL VAL B . n E 1 39 ILE 39 47 47 ILE ILE B . n E 1 40 PHE 40 48 48 PHE PHE B . n E 1 41 ARG 41 49 49 ARG ARG B . n E 1 42 ASN 42 68 68 ASN ASN B . n E 1 43 THR 43 69 69 THR THR B . n E 1 44 ALA 44 70 70 ALA ALA B . n E 1 45 SER 45 71 71 SER SER B . n E 1 46 LEU 46 72 72 LEU LEU B . n E 1 47 THR 47 73 73 THR THR B . n E 1 48 ILE 48 74 74 ILE ILE B . n E 1 49 THR 49 75 75 THR THR B . n E 1 50 GLY 50 76 76 GLY GLY B . n E 1 51 ALA 51 77 77 ALA ALA B . n E 1 52 GLN 52 78 78 GLN GLN B . n E 1 53 ALA 53 79 79 ALA ALA B . n E 1 54 GLU 54 80 80 GLU GLU B . n E 1 55 ASP 55 81 81 ASP ASP B . n E 1 56 GLU 56 82 82 GLU GLU B . n E 1 57 ALA 57 83 83 ALA ALA B . n E 1 58 ASP 58 84 84 ASP ASP B . n E 1 59 TYR 59 85 85 TYR TYR B . n E 1 60 TYR 60 86 86 TYR TYR B . n E 1 61 CYS 61 87 87 CYS CYS B . n E 1 62 ASN 62 88 88 ASN ASN B . n E 1 63 SER 63 89 89 SER SER B . n E 1 64 ARG 64 90 90 ARG ARG B . n E 1 65 ASP 65 91 91 ASP ASP B . n E 1 66 SER 66 92 92 SER SER B . n E 1 67 SER 67 93 93 SER SER B . n E 1 68 ALA 68 94 94 ALA ALA B . n E 1 69 ASN 69 95 95 ASN ASN B . n E 1 70 HIS 70 96 96 HIS HIS B . n E 1 71 GLN 71 97 97 GLN GLN B . n E 1 72 VAL 72 98 98 VAL VAL B . n E 1 73 PHE 73 99 99 PHE PHE B . n E 1 74 GLY 74 100 100 GLY GLY B . n E 1 75 GLY 75 101 101 GLY GLY B . n E 1 76 GLY 76 102 102 GLY GLY B . n E 1 77 THR 77 103 103 THR THR B . n E 1 78 LYS 78 104 104 LYS LYS B . n E 1 79 LEU 79 105 105 LEU LEU B . n E 1 80 THR 80 106 106 THR THR B . n E 1 81 VAL 81 107 107 VAL VAL B . n F 1 1 ALA 1 9 9 ALA ALA A . n F 1 2 VAL 2 10 10 VAL VAL A . n F 1 3 SER 3 11 11 SER SER A . n F 1 4 VAL 4 12 12 VAL VAL A . n F 1 5 ALA 5 13 13 ALA ALA A . n F 1 6 LEU 6 14 14 LEU LEU A . n F 1 7 GLY 7 15 15 GLY GLY A . n F 1 8 GLN 8 16 16 GLN GLN A . n F 1 9 THR 9 17 17 THR THR A . n F 1 10 VAL 10 18 18 VAL VAL A . n F 1 11 ARG 11 19 19 ARG ARG A . n F 1 12 ILE 12 20 20 ILE ILE A . n F 1 13 THR 13 21 21 THR THR A . n F 1 14 CYS 14 22 22 CYS CYS A . n F 1 15 GLN 15 23 23 GLN GLN A . n F 1 16 GLY 16 24 24 GLY GLY A . n F 1 17 ASP 17 25 25 ASP ASP A . n F 1 18 SER 18 26 26 SER SER A . n F 1 19 LEU 19 27 27 LEU LEU A . n F 1 20 ARG 20 28 28 ARG ARG A . n F 1 21 SER 21 29 29 SER SER A . n F 1 22 TYR 22 30 30 TYR TYR A . n F 1 23 SER 23 31 31 SER SER A . n F 1 24 ALA 24 32 32 ALA ALA A . n F 1 25 SER 25 33 33 SER SER A . n F 1 26 TRP 26 34 34 TRP TRP A . n F 1 27 TYR 27 35 35 TYR TYR A . n F 1 28 GLN 28 36 36 GLN GLN A . n F 1 29 GLN 29 37 37 GLN GLN A . n F 1 30 LYS 30 38 38 LYS LYS A . n F 1 31 PRO 31 39 39 PRO PRO A . n F 1 32 GLY 32 40 40 GLY GLY A . n F 1 33 GLN 33 41 41 GLN GLN A . n F 1 34 ALA 34 42 42 ALA ALA A . n F 1 35 PRO 35 43 43 PRO PRO A . n F 1 36 VAL 36 44 44 VAL VAL A . n F 1 37 LEU 37 45 45 LEU LEU A . n F 1 38 VAL 38 46 46 VAL VAL A . n F 1 39 ILE 39 47 47 ILE ILE A . n F 1 40 PHE 40 48 48 PHE PHE A . n F 1 41 ARG 41 49 49 ARG ARG A . n F 1 42 ASN 42 68 68 ASN ASN A . n F 1 43 THR 43 69 69 THR THR A . n F 1 44 ALA 44 70 70 ALA ALA A . n F 1 45 SER 45 71 71 SER SER A . n F 1 46 LEU 46 72 72 LEU LEU A . n F 1 47 THR 47 73 73 THR THR A . n F 1 48 ILE 48 74 74 ILE ILE A . n F 1 49 THR 49 75 75 THR THR A . n F 1 50 GLY 50 76 76 GLY GLY A . n F 1 51 ALA 51 77 77 ALA ALA A . n F 1 52 GLN 52 78 78 GLN GLN A . n F 1 53 ALA 53 79 79 ALA ALA A . n F 1 54 GLU 54 80 80 GLU GLU A . n F 1 55 ASP 55 81 81 ASP ASP A . n F 1 56 GLU 56 82 82 GLU GLU A . n F 1 57 ALA 57 83 83 ALA ALA A . n F 1 58 ASP 58 84 84 ASP ASP A . n F 1 59 TYR 59 85 85 TYR TYR A . n F 1 60 TYR 60 86 86 TYR TYR A . n F 1 61 CYS 61 87 87 CYS CYS A . n F 1 62 ASN 62 88 88 ASN ASN A . n F 1 63 SER 63 89 89 SER SER A . n F 1 64 ARG 64 90 90 ARG ARG A . n F 1 65 ASP 65 91 91 ASP ASP A . n F 1 66 SER 66 92 92 SER SER A . n F 1 67 SER 67 93 93 SER SER A . n F 1 68 ALA 68 94 94 ALA ALA A . n F 1 69 ASN 69 95 95 ASN ASN A . n F 1 70 HIS 70 96 96 HIS HIS A . n F 1 71 GLN 71 97 97 GLN GLN A . n F 1 72 VAL 72 98 98 VAL VAL A . n F 1 73 PHE 73 99 99 PHE PHE A . n F 1 74 GLY 74 100 100 GLY GLY A . n F 1 75 GLY 75 101 101 GLY GLY A . n F 1 76 GLY 76 102 102 GLY GLY A . n F 1 77 THR 77 103 103 THR THR A . n F 1 78 LYS 78 104 104 LYS LYS A . n F 1 79 LEU 79 105 105 LEU LEU A . n F 1 80 THR 80 106 106 THR THR A . n F 1 81 VAL 81 107 107 VAL VAL A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 32740 ? 1 MORE -101 ? 1 'SSA (A^2)' 18250 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2021-02-24 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _em_3d_fitting.entry_id 6Z1I _em_3d_fitting.id 1 _em_3d_fitting.details 'Secondary structure restraints and NCS were applied during refinement' _em_3d_fitting.overall_b_value 73.24 _em_3d_fitting.ref_protocol OTHER _em_3d_fitting.ref_space REAL _em_3d_fitting.target_criteria 'REAL-SPACE (WEIGHTED MAP SUM AT ATOM CENTERS)' _em_3d_fitting.method ? # _em_3d_reconstruction.entry_id 6Z1I _em_3d_reconstruction.id 1 _em_3d_reconstruction.algorithm 'FOURIER SPACE' _em_3d_reconstruction.details ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.num_class_averages 1 _em_3d_reconstruction.num_particles 12122 _em_3d_reconstruction.resolution 3.4 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.symmetry_type HELICAL _em_3d_reconstruction.method ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.magnification_calibration ? # _em_buffer.id 1 _em_buffer.details ? _em_buffer.pH 7.0 _em_buffer.specimen_id 1 _em_buffer.name ? # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.details 'Extracted fibrils from the explanted heart of a systemic AL amyloidosis patient' _em_entity_assembly.name 'Amyloid fibril of an antibody lambda 3 immunoglobulin light chain' _em_entity_assembly.source NATURAL _em_entity_assembly.type COMPLEX _em_entity_assembly.entity_id_list 1 _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? # _em_image_scans.entry_id 6Z1I _em_image_scans.id 1 _em_image_scans.dimension_height 3710 _em_image_scans.dimension_width 3838 _em_image_scans.frames_per_image 40 _em_image_scans.image_recording_id 1 _em_image_scans.sampling_size ? _em_image_scans.scanner_model ? _em_image_scans.used_frames_per_image ? _em_image_scans.citation_id ? _em_image_scans.number_digital_images ? _em_image_scans.od_range ? _em_image_scans.quant_bit_size ? _em_image_scans.details ? # _em_imaging.id 1 _em_imaging.entry_id 6Z1I _em_imaging.accelerating_voltage 300 _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.calibrated_defocus_max ? _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_magnification ? _em_imaging.cryogen NITROGEN _em_imaging.details ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.microscope_model 'FEI TITAN KRIOS' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs 2.7 _em_imaging.nominal_defocus_max ? _em_imaging.nominal_defocus_min ? _em_imaging.nominal_magnification ? _em_imaging.recording_temperature_maximum ? _em_imaging.recording_temperature_minimum ? _em_imaging.residual_tilt ? _em_imaging.specimen_holder_model 'FEI TITAN KRIOS AUTOGRID HOLDER' _em_imaging.specimen_id 1 _em_imaging.citation_id ? _em_imaging.date ? _em_imaging.temperature ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.astigmatism ? _em_imaging.detector_distance ? _em_imaging.electron_beam_tilt_params ? _em_imaging.specimen_holder_type ? # _em_sample_support.id 1 _em_sample_support.specimen_id 1 _em_sample_support.details '40 mA' _em_sample_support.grid_material COPPER _em_sample_support.grid_mesh_size 400 _em_sample_support.grid_type C-flat-1.2/1.3 _em_sample_support.method ? _em_sample_support.film_material ? # _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.chamber_temperature 295 _em_vitrification.cryogen_name ETHANE _em_vitrification.details 'blot for 9s before plunging' _em_vitrification.humidity 95 _em_vitrification.instrument 'FEI VITROBOT MARK III' _em_vitrification.entry_id 6Z1I _em_vitrification.citation_id ? _em_vitrification.method ? _em_vitrification.temp ? _em_vitrification.time_resolved_state ? # _em_experiment.entry_id 6Z1I _em_experiment.id 1 _em_experiment.aggregation_state FILAMENT _em_experiment.reconstruction_method HELICAL _em_experiment.entity_assembly_id 1 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LEU D 27 ? ? 32.34 51.56 2 1 ALA D 42 ? ? -119.24 72.39 3 1 THR D 69 ? ? 36.69 41.64 4 1 ALA D 83 ? ? -109.67 -80.72 5 1 ALA D 94 ? ? -103.85 -85.66 6 1 LEU E 27 ? ? 32.37 51.53 7 1 ALA E 42 ? ? -119.24 72.44 8 1 THR E 69 ? ? 36.60 41.66 9 1 ALA E 83 ? ? -109.66 -80.73 10 1 ALA E 94 ? ? -103.83 -85.63 11 1 LEU F 27 ? ? 32.39 51.60 12 1 ALA F 42 ? ? -119.39 72.48 13 1 THR F 69 ? ? 36.69 41.65 14 1 ALA F 83 ? ? -109.68 -80.76 15 1 ALA F 94 ? ? -103.87 -85.63 16 1 LEU C 27 ? ? 32.37 51.55 17 1 ALA C 42 ? ? -119.31 72.38 18 1 THR C 69 ? ? 36.72 41.63 19 1 ALA C 83 ? ? -109.67 -80.78 20 1 ALA C 94 ? ? -103.76 -85.70 21 1 LEU B 27 ? ? 32.34 51.53 22 1 ALA B 42 ? ? -119.28 72.39 23 1 THR B 69 ? ? 36.63 41.65 24 1 ALA B 83 ? ? -109.63 -80.80 25 1 ALA B 94 ? ? -103.78 -85.65 26 1 LEU A 27 ? ? 32.44 51.52 27 1 ALA A 42 ? ? -119.24 72.39 28 1 THR A 69 ? ? 36.72 41.64 29 1 ALA A 83 ? ? -109.58 -80.85 30 1 ALA A 94 ? ? -103.84 -85.62 # loop_ _pdbx_validate_polymer_linkage.id _pdbx_validate_polymer_linkage.PDB_model_num _pdbx_validate_polymer_linkage.auth_atom_id_1 _pdbx_validate_polymer_linkage.auth_asym_id_1 _pdbx_validate_polymer_linkage.auth_comp_id_1 _pdbx_validate_polymer_linkage.auth_seq_id_1 _pdbx_validate_polymer_linkage.PDB_ins_code_1 _pdbx_validate_polymer_linkage.label_alt_id_1 _pdbx_validate_polymer_linkage.auth_atom_id_2 _pdbx_validate_polymer_linkage.auth_asym_id_2 _pdbx_validate_polymer_linkage.auth_comp_id_2 _pdbx_validate_polymer_linkage.auth_seq_id_2 _pdbx_validate_polymer_linkage.PDB_ins_code_2 _pdbx_validate_polymer_linkage.label_alt_id_2 _pdbx_validate_polymer_linkage.dist 1 1 C D ARG 49 ? ? N D ASN 68 ? ? 16.82 2 1 C E ARG 49 ? ? N E ASN 68 ? ? 16.82 3 1 C F ARG 49 ? ? N F ASN 68 ? ? 16.82 4 1 C C ARG 49 ? ? N C ASN 68 ? ? 16.82 5 1 C B ARG 49 ? ? N B ASN 68 ? ? 16.82 6 1 C A ARG 49 ? ? N A ASN 68 ? ? 16.82 # _em_buffer_component.buffer_id 1 _em_buffer_component.id 1 _em_buffer_component.concentration ? _em_buffer_component.concentration_units ? _em_buffer_component.formula H2O _em_buffer_component.name 'Distilled water' # _em_ctf_correction.id 1 _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' _em_ctf_correction.details 'CTF was estimated from the non-dose-weighted micrographs' # _em_entity_assembly_molwt.entity_assembly_id 1 _em_entity_assembly_molwt.id 1 _em_entity_assembly_molwt.experimental_flag NO _em_entity_assembly_molwt.units ? _em_entity_assembly_molwt.value ? # _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.ncbi_tax_id 9606 _em_entity_assembly_naturalsource.organ Heart _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organism 'Homo sapiens' _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue 'Heart muscle' # _em_helical_entity.id 1 _em_helical_entity.image_processing_id 1 _em_helical_entity.angular_rotation_per_subunit -1.1 _em_helical_entity.axial_rise_per_subunit 4.8 _em_helical_entity.axial_symmetry C1 _em_helical_entity.details ? # _em_image_processing.id 1 _em_image_processing.image_recording_id 1 _em_image_processing.details 'Motion-corrected and dose-weighted movie frames' # _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.avg_electron_dose_per_image 40 _em_image_recording.average_exposure_time ? _em_image_recording.details ? _em_image_recording.detector_mode COUNTING _em_image_recording.film_or_detector_model 'GATAN K2 SUMMIT (4k x 4k)' _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged 1 _em_image_recording.num_real_images 1964 # _em_imaging_optics.id 1 _em_imaging_optics.imaging_id 1 _em_imaging_optics.chr_aberration_corrector ? _em_imaging_optics.energyfilter_lower ? _em_imaging_optics.energyfilter_name ? _em_imaging_optics.energyfilter_upper ? _em_imaging_optics.energyfilter_slit_width 20 _em_imaging_optics.phase_plate ? _em_imaging_optics.sph_aberration_corrector ? # _em_particle_selection.id 1 _em_particle_selection.image_processing_id 1 _em_particle_selection.details 'manual particle picking helical start-end coordinates' _em_particle_selection.method ? _em_particle_selection.num_particles_selected 194502 _em_particle_selection.reference_model ? # loop_ _em_software.id _em_software.category _em_software.details _em_software.name _em_software.version _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id 1 'PARTICLE SELECTION' ? RELION 2.1.0 1 ? ? 2 'IMAGE ACQUISITION' ? SerialEM ? ? ? 1 3 MASKING ? ? ? ? ? ? 4 'CTF CORRECTION' ? Gctf 1.06 1 ? ? 5 'LAYERLINE INDEXING' ? ? ? ? ? ? 6 'DIFFRACTION INDEXING' ? ? ? ? ? ? 7 'MODEL FITTING' 'Backbone was traced using baton mode; backbone mutated to the protein sequence; real-space refinement with restraints' Coot 0.8.9.2 ? 1 ? 8 OTHER ? ? ? ? ? ? 9 'MODEL REFINEMENT' phenix.real_space_refine PHENIX 1.16 ? 1 ? 10 'INITIAL EULER ASSIGNMENT' ? ? ? 1 ? ? 11 'FINAL EULER ASSIGNMENT' ? ? ? 1 ? ? 12 CLASSIFICATION ? ? ? 1 ? ? 13 RECONSTRUCTION ? RELION 2.1.0 1 ? ? # _em_specimen.id 1 _em_specimen.experiment_id 1 _em_specimen.concentration ? _em_specimen.details 'Sample in pure water, pH not determined' _em_specimen.embedding_applied NO _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # _pdbx_audit_support.funding_organization 'German Research Foundation (DFG)' _pdbx_audit_support.country Germany _pdbx_audit_support.grant_number FOR2969 _pdbx_audit_support.ordinal 1 # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'mass spectrometry' _pdbx_struct_assembly_auth_evidence.details 'Identification of the light chain fragment constituting the fibril' #