HEADER TRANSLATION 15-MAY-20 6Z29 TITLE STRUCTURE OF EIF4G1 (37-49) - PUB1 RRM3 CHIMERA IN SOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: EUKARYOTIC INITIATION FACTOR 4F SUBUNIT P150,NUCLEAR AND COMPND 3 CYTOPLASMIC POLYADENYLATED RNA-BINDING PROTEIN PUB1; COMPND 4 CHAIN: A; COMPND 5 SYNONYM: EIF4F P150,EIF4G1,MRNA CAP-BINDING PROTEIN COMPLEX SUBUNIT COMPND 6 P150,ARS CONSENSUS-BINDING PROTEIN ACBP-60,POLY URIDYLATE-BINDING COMPND 7 PROTEIN,POLY(U)-BINDING PROTEIN; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE S288C; SOURCE 3 ORGANISM_TAXID: 559292; SOURCE 4 GENE: TIF4631, YGR162W, PUB1, RNP1, YNL016W, N2842; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS STRESS GRANULES, TRANSLATION REGULATION, TRANSLATION EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR B.CHAVES-ARQUERO,S.MARTINEZ-LUMBRERAS,J.M.PEREZ-CANADILLAS REVDAT 4 19-JUN-24 6Z29 1 REMARK REVDAT 3 14-JUN-23 6Z29 1 REMARK REVDAT 2 07-DEC-22 6Z29 1 JRNL REVDAT 1 26-MAY-21 6Z29 0 JRNL AUTH B.CHAVES-ARQUERO,S.MARTINEZ-LUMBRERAS,N.SIBILLE,S.CAMERO, JRNL AUTH 2 P.BERNADO,M.A.JIMENEZ,S.ZORRILLA,J.M.PEREZ-CANADILLAS JRNL TITL EIF4G1 N-TERMINAL INTRINSICALLY DISORDERED DOMAIN IS A JRNL TITL 2 MULTI-DOCKING STATION FOR RNA, PAB1, PUB1, AND JRNL TITL 3 SELF-ASSEMBLY. JRNL REF FRONT MOL BIOSCI V. 9 86121 2022 JRNL REFN ESSN 2296-889X JRNL PMID 36213119 JRNL DOI 10.3389/FMOLB.2022.986121 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : AMBER REMARK 3 AUTHORS : CASE, DARDEN, CHEATHAM III, SIMMERLING, WANG, REMARK 3 DUKE, LUO, ... AND KOLLMAN REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6Z29 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 17-MAY-20. REMARK 100 THE DEPOSITION ID IS D_1292108487. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 301.2; 301.2; 301.2 REMARK 210 PH : 5.0; 5.0; 5.0 REMARK 210 IONIC STRENGTH : 0.050; 0.050; 0.050 REMARK 210 PRESSURE : 1 ATM; 1 ATM; 1 ATM REMARK 210 SAMPLE CONTENTS : 250 UM EIF4G1(37-49)/PUB1(RRM3) REMARK 210 CHIMERA, 25 MM POTASSIUM REMARK 210 PHOSPHATE, 25 MM SODIUM CHLORIDE, REMARK 210 0.1 MM DTT, 90% H2O/10% D2O; REMARK 210 250 UM EIF4G1(37-49)/PUB1(RRM3) REMARK 210 CHIMERA, 25 MM POTASSIUM REMARK 210 PHOSPHATE, 25 MM SODIUM CHLORIDE, REMARK 210 0.1 MM DTT, 100% D2O; 148 UM [U- REMARK 210 13C; U-15N] EIF4G1(37-49)/ REMARK 210 PUB1(RRM3) CHIMERA, 25 MM REMARK 210 POTASSIUM PHOSPHATE, 25 MM REMARK 210 SODIUM CHLORIDE, 0.1 MM DTT, 90% REMARK 210 H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D 1H-13C HSQC REMARK 210 ALIPHATIC; 3D HNCO; 3D HNCA; 3D REMARK 210 CBCA(CO)NH; 2D 1H-1H NOESY; 2D REMARK 210 1H-1H TOCSY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE II REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : TOPSPIN, NMRPIPE, CCPNMR REMARK 210 ANALYSIS, CYANA REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 0 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8280 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 THR A 303 -61.59 -103.65 REMARK 500 1 ASN A 306 -169.51 -122.38 REMARK 500 1 ASN A 310 53.26 -97.98 REMARK 500 1 TYR A 311 52.88 -169.99 REMARK 500 1 GLN A 313 91.10 56.67 REMARK 500 1 ILE A 318 88.68 53.44 REMARK 500 1 LEU A 320 68.05 -151.70 REMARK 500 1 GLN A 323 -73.00 -52.57 REMARK 500 1 ALA A 328 31.11 -93.14 REMARK 500 1 VAL A 329 -41.26 -135.09 REMARK 500 1 SER A 335 -75.53 -50.58 REMARK 500 1 PRO A 338 64.98 -69.70 REMARK 500 1 ARG A 339 -62.74 -157.55 REMARK 500 1 ALA A 343 -168.05 -79.00 REMARK 500 1 PHE A 351 40.74 -91.34 REMARK 500 1 PRO A 359 37.10 -69.77 REMARK 500 1 LEU A 360 -53.84 -147.91 REMARK 500 1 ASP A 369 55.46 -152.82 REMARK 500 1 GLU A 375 35.19 -94.34 REMARK 500 1 LYS A 376 -61.33 -156.11 REMARK 500 1 CYS A 378 137.42 -179.74 REMARK 500 1 LEU A 396 -75.36 -113.13 REMARK 500 1 ALA A 397 85.85 43.90 REMARK 500 1 PRO A 400 97.62 -69.69 REMARK 500 1 PHE A 401 -60.61 -94.36 REMARK 500 1 GLN A 402 54.82 -157.71 REMARK 500 1 LEU A 406 -174.93 -57.82 REMARK 500 1 LYS A 412 101.54 63.33 REMARK 500 2 SER A 300 99.18 -171.26 REMARK 500 2 THR A 303 -55.09 -135.43 REMARK 500 2 ASN A 304 -169.61 63.31 REMARK 500 2 ASN A 306 102.73 -179.46 REMARK 500 2 ASN A 310 -170.23 56.61 REMARK 500 2 LYS A 314 55.58 -175.25 REMARK 500 2 THR A 317 102.93 -160.25 REMARK 500 2 ILE A 318 99.75 60.55 REMARK 500 2 VAL A 324 158.24 63.81 REMARK 500 2 GLN A 327 34.41 -93.84 REMARK 500 2 SER A 335 -75.78 -51.18 REMARK 500 2 PRO A 338 65.05 -69.76 REMARK 500 2 ARG A 339 -61.34 -155.62 REMARK 500 2 THR A 341 20.14 -153.51 REMARK 500 2 ALA A 343 -167.33 -61.16 REMARK 500 2 PHE A 351 46.27 -88.12 REMARK 500 2 LYS A 371 -75.08 -72.97 REMARK 500 2 HIS A 372 88.30 58.69 REMARK 500 2 LYS A 376 -55.12 -121.91 REMARK 500 2 CYS A 378 110.58 -175.63 REMARK 500 2 TYR A 383 -176.20 -57.56 REMARK 500 2 GLN A 388 -58.41 -121.35 REMARK 500 REMARK 500 THIS ENTRY HAS 528 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 34517 RELATED DB: BMRB REMARK 900 STRUCTURE OF EIF4G1 (37-49) - PUB1 RRM3 CHIMERA IN SOLUTION DBREF 6Z29 A 301 315 UNP P39935 IF4F1_YEAST 35 49 DBREF 6Z29 A 316 414 UNP P32588 PUB1_YEAST 316 414 SEQADV 6Z29 GLY A 299 UNP P39935 EXPRESSION TAG SEQADV 6Z29 SER A 300 UNP P39935 EXPRESSION TAG SEQRES 1 A 116 GLY SER GLY TYR THR ASN TYR ASN ASN GLY SER ASN TYR SEQRES 2 A 116 THR GLN LYS LYS GLN THR ILE GLY LEU PRO PRO GLN VAL SEQRES 3 A 116 ASN PRO GLN ALA VAL ASP HIS ILE ILE ARG SER ALA PRO SEQRES 4 A 116 PRO ARG VAL THR THR ALA TYR ILE GLY ASN ILE PRO HIS SEQRES 5 A 116 PHE ALA THR GLU ALA ASP LEU ILE PRO LEU PHE GLN ASN SEQRES 6 A 116 PHE GLY PHE ILE LEU ASP PHE LYS HIS TYR PRO GLU LYS SEQRES 7 A 116 GLY CYS CYS PHE ILE LYS TYR ASP THR HIS GLU GLN ALA SEQRES 8 A 116 ALA VAL CYS ILE VAL ALA LEU ALA ASN PHE PRO PHE GLN SEQRES 9 A 116 GLY ARG ASN LEU ARG THR GLY TRP GLY LYS GLU ARG HELIX 1 AA1 PRO A 326 ARG A 334 1 9 HELIX 2 AA2 THR A 353 GLY A 365 1 13 HELIX 3 AA3 THR A 385 LEU A 396 1 12 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1