data_6Z2P # _entry.id 6Z2P # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6Z2P pdb_00006z2p 10.2210/pdb6z2p/pdb WWPDB D_1292108752 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2020-09-30 2 'Structure model' 1 1 2021-11-03 3 'Structure model' 1 2 2021-11-10 4 'Structure model' 1 3 2024-01-24 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Database references' 5 4 'Structure model' 'Data collection' 6 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 2 'Structure model' database_2 4 2 'Structure model' pdbx_database_proc 5 3 'Structure model' citation 6 3 'Structure model' pdbx_database_proc 7 4 'Structure model' chem_comp_atom 8 4 'Structure model' chem_comp_bond 9 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.pdbx_database_id_DOI' 2 2 'Structure model' '_citation.title' 3 2 'Structure model' '_citation_author.identifier_ORCID' 4 2 'Structure model' '_citation_author.name' 5 2 'Structure model' '_database_2.pdbx_DOI' 6 2 'Structure model' '_database_2.pdbx_database_accession' 7 3 'Structure model' '_citation.journal_volume' 8 3 'Structure model' '_citation.page_first' 9 3 'Structure model' '_citation.page_last' 10 3 'Structure model' '_citation.pdbx_database_id_PubMed' 11 3 'Structure model' '_citation.title' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6Z2P _pdbx_database_status.recvd_initial_deposition_date 2020-05-18 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Trastoy, B.' 1 0000-0002-2178-732X 'Naegali, A.' 2 0000-0002-5938-9124 'Anso, I.' 3 0000-0002-4106-8031 'Sjogren, J.' 4 0000-0003-1371-9623 'Guerin, M.E.' 5 0000-0001-9524-3184 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nat Commun' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2041-1723 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 11 _citation.language ? _citation.page_first 4844 _citation.page_last 4844 _citation.title 'Structural basis of mammalian mucin processing by the human gut O-glycopeptidase OgpA from Akkermansia muciniphila.' _citation.year 2020 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41467-020-18696-y _citation.pdbx_database_id_PubMed 32973204 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Trastoy, B.' 1 ? primary 'Naegeli, A.' 2 ? primary 'Anso, I.' 3 ? primary 'Sjogren, J.' 4 ? primary 'Guerin, M.E.' 5 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'O-glycan protease' 41731.031 1 ? 'H205A, D206A' ? ? 2 polymer syn Glycodrosocin 2204.579 1 ? ? ? ? 3 branched man 'beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-alpha-D-galactopyranose' 383.349 1 ? ? ? ? 4 non-polymer man 'CALCIUM ION' 40.078 1 ? ? ? ? 5 water nat water 18.015 38 ? ? ? ? # _entity_name_com.entity_id 3 _entity_name_com.name 'Thomsen-Friedenreich antigen' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MEVTVPDALKDRIALKKTARQLNIVYFLGSDTEPVPDYERRLSELLLYLQQFYGKEMQRHGYGARSFGLDIKSPGRVNII EYKAKNPAAHYPYENGGGWKAAQELDEFFKAHPDRKKSQHTLIIMPTWNDEKNGPDNPGGVPFYGMGRNCFALDYPAFDI KHLGQKTREGRLLTKWYGGMAAALGHGLNLPHNHQTASDGKKYGTALMGSGNYTFGTSPTFLTPASCALLDACEVFSVTP SQQFYEGKPEVEVGDVAISFKGDQILVSGNYKSPQTVKALNVYIQDPPYAVNQDYDAVSFSRRLGKKSGKFSMKIDKKEL EGLNNNEFRISLMFILANGLHMQKHFTFHWDALQDYRDGSKSGSGHHHHHH ; ;MEVTVPDALKDRIALKKTARQLNIVYFLGSDTEPVPDYERRLSELLLYLQQFYGKEMQRHGYGARSFGLDIKSPGRVNII EYKAKNPAAHYPYENGGGWKAAQELDEFFKAHPDRKKSQHTLIIMPTWNDEKNGPDNPGGVPFYGMGRNCFALDYPAFDI KHLGQKTREGRLLTKWYGGMAAALGHGLNLPHNHQTASDGKKYGTALMGSGNYTFGTSPTFLTPASCALLDACEVFSVTP SQQFYEGKPEVEVGDVAISFKGDQILVSGNYKSPQTVKALNVYIQDPPYAVNQDYDAVSFSRRLGKKSGKFSMKIDKKEL EGLNNNEFRISLMFILANGLHMQKHFTFHWDALQDYRDGSKSGSGHHHHHH ; A ? 2 'polypeptide(L)' no no GKPRPYSPRPTSHPRPIRV GKPRPYSPRPTSHPRPIRV C ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'CALCIUM ION' CA 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLU n 1 3 VAL n 1 4 THR n 1 5 VAL n 1 6 PRO n 1 7 ASP n 1 8 ALA n 1 9 LEU n 1 10 LYS n 1 11 ASP n 1 12 ARG n 1 13 ILE n 1 14 ALA n 1 15 LEU n 1 16 LYS n 1 17 LYS n 1 18 THR n 1 19 ALA n 1 20 ARG n 1 21 GLN n 1 22 LEU n 1 23 ASN n 1 24 ILE n 1 25 VAL n 1 26 TYR n 1 27 PHE n 1 28 LEU n 1 29 GLY n 1 30 SER n 1 31 ASP n 1 32 THR n 1 33 GLU n 1 34 PRO n 1 35 VAL n 1 36 PRO n 1 37 ASP n 1 38 TYR n 1 39 GLU n 1 40 ARG n 1 41 ARG n 1 42 LEU n 1 43 SER n 1 44 GLU n 1 45 LEU n 1 46 LEU n 1 47 LEU n 1 48 TYR n 1 49 LEU n 1 50 GLN n 1 51 GLN n 1 52 PHE n 1 53 TYR n 1 54 GLY n 1 55 LYS n 1 56 GLU n 1 57 MET n 1 58 GLN n 1 59 ARG n 1 60 HIS n 1 61 GLY n 1 62 TYR n 1 63 GLY n 1 64 ALA n 1 65 ARG n 1 66 SER n 1 67 PHE n 1 68 GLY n 1 69 LEU n 1 70 ASP n 1 71 ILE n 1 72 LYS n 1 73 SER n 1 74 PRO n 1 75 GLY n 1 76 ARG n 1 77 VAL n 1 78 ASN n 1 79 ILE n 1 80 ILE n 1 81 GLU n 1 82 TYR n 1 83 LYS n 1 84 ALA n 1 85 LYS n 1 86 ASN n 1 87 PRO n 1 88 ALA n 1 89 ALA n 1 90 HIS n 1 91 TYR n 1 92 PRO n 1 93 TYR n 1 94 GLU n 1 95 ASN n 1 96 GLY n 1 97 GLY n 1 98 GLY n 1 99 TRP n 1 100 LYS n 1 101 ALA n 1 102 ALA n 1 103 GLN n 1 104 GLU n 1 105 LEU n 1 106 ASP n 1 107 GLU n 1 108 PHE n 1 109 PHE n 1 110 LYS n 1 111 ALA n 1 112 HIS n 1 113 PRO n 1 114 ASP n 1 115 ARG n 1 116 LYS n 1 117 LYS n 1 118 SER n 1 119 GLN n 1 120 HIS n 1 121 THR n 1 122 LEU n 1 123 ILE n 1 124 ILE n 1 125 MET n 1 126 PRO n 1 127 THR n 1 128 TRP n 1 129 ASN n 1 130 ASP n 1 131 GLU n 1 132 LYS n 1 133 ASN n 1 134 GLY n 1 135 PRO n 1 136 ASP n 1 137 ASN n 1 138 PRO n 1 139 GLY n 1 140 GLY n 1 141 VAL n 1 142 PRO n 1 143 PHE n 1 144 TYR n 1 145 GLY n 1 146 MET n 1 147 GLY n 1 148 ARG n 1 149 ASN n 1 150 CYS n 1 151 PHE n 1 152 ALA n 1 153 LEU n 1 154 ASP n 1 155 TYR n 1 156 PRO n 1 157 ALA n 1 158 PHE n 1 159 ASP n 1 160 ILE n 1 161 LYS n 1 162 HIS n 1 163 LEU n 1 164 GLY n 1 165 GLN n 1 166 LYS n 1 167 THR n 1 168 ARG n 1 169 GLU n 1 170 GLY n 1 171 ARG n 1 172 LEU n 1 173 LEU n 1 174 THR n 1 175 LYS n 1 176 TRP n 1 177 TYR n 1 178 GLY n 1 179 GLY n 1 180 MET n 1 181 ALA n 1 182 ALA n 1 183 ALA n 1 184 LEU n 1 185 GLY n 1 186 HIS n 1 187 GLY n 1 188 LEU n 1 189 ASN n 1 190 LEU n 1 191 PRO n 1 192 HIS n 1 193 ASN n 1 194 HIS n 1 195 GLN n 1 196 THR n 1 197 ALA n 1 198 SER n 1 199 ASP n 1 200 GLY n 1 201 LYS n 1 202 LYS n 1 203 TYR n 1 204 GLY n 1 205 THR n 1 206 ALA n 1 207 LEU n 1 208 MET n 1 209 GLY n 1 210 SER n 1 211 GLY n 1 212 ASN n 1 213 TYR n 1 214 THR n 1 215 PHE n 1 216 GLY n 1 217 THR n 1 218 SER n 1 219 PRO n 1 220 THR n 1 221 PHE n 1 222 LEU n 1 223 THR n 1 224 PRO n 1 225 ALA n 1 226 SER n 1 227 CYS n 1 228 ALA n 1 229 LEU n 1 230 LEU n 1 231 ASP n 1 232 ALA n 1 233 CYS n 1 234 GLU n 1 235 VAL n 1 236 PHE n 1 237 SER n 1 238 VAL n 1 239 THR n 1 240 PRO n 1 241 SER n 1 242 GLN n 1 243 GLN n 1 244 PHE n 1 245 TYR n 1 246 GLU n 1 247 GLY n 1 248 LYS n 1 249 PRO n 1 250 GLU n 1 251 VAL n 1 252 GLU n 1 253 VAL n 1 254 GLY n 1 255 ASP n 1 256 VAL n 1 257 ALA n 1 258 ILE n 1 259 SER n 1 260 PHE n 1 261 LYS n 1 262 GLY n 1 263 ASP n 1 264 GLN n 1 265 ILE n 1 266 LEU n 1 267 VAL n 1 268 SER n 1 269 GLY n 1 270 ASN n 1 271 TYR n 1 272 LYS n 1 273 SER n 1 274 PRO n 1 275 GLN n 1 276 THR n 1 277 VAL n 1 278 LYS n 1 279 ALA n 1 280 LEU n 1 281 ASN n 1 282 VAL n 1 283 TYR n 1 284 ILE n 1 285 GLN n 1 286 ASP n 1 287 PRO n 1 288 PRO n 1 289 TYR n 1 290 ALA n 1 291 VAL n 1 292 ASN n 1 293 GLN n 1 294 ASP n 1 295 TYR n 1 296 ASP n 1 297 ALA n 1 298 VAL n 1 299 SER n 1 300 PHE n 1 301 SER n 1 302 ARG n 1 303 ARG n 1 304 LEU n 1 305 GLY n 1 306 LYS n 1 307 LYS n 1 308 SER n 1 309 GLY n 1 310 LYS n 1 311 PHE n 1 312 SER n 1 313 MET n 1 314 LYS n 1 315 ILE n 1 316 ASP n 1 317 LYS n 1 318 LYS n 1 319 GLU n 1 320 LEU n 1 321 GLU n 1 322 GLY n 1 323 LEU n 1 324 ASN n 1 325 ASN n 1 326 ASN n 1 327 GLU n 1 328 PHE n 1 329 ARG n 1 330 ILE n 1 331 SER n 1 332 LEU n 1 333 MET n 1 334 PHE n 1 335 ILE n 1 336 LEU n 1 337 ALA n 1 338 ASN n 1 339 GLY n 1 340 LEU n 1 341 HIS n 1 342 MET n 1 343 GLN n 1 344 LYS n 1 345 HIS n 1 346 PHE n 1 347 THR n 1 348 PHE n 1 349 HIS n 1 350 TRP n 1 351 ASP n 1 352 ALA n 1 353 LEU n 1 354 GLN n 1 355 ASP n 1 356 TYR n 1 357 ARG n 1 358 ASP n 1 359 GLY n 1 360 SER n 1 361 LYS n 1 362 SER n 1 363 GLY n 1 364 SER n 1 365 GLY n 1 366 HIS n 1 367 HIS n 1 368 HIS n 1 369 HIS n 1 370 HIS n 1 371 HIS n 2 1 GLY n 2 2 LYS n 2 3 PRO n 2 4 ARG n 2 5 PRO n 2 6 TYR n 2 7 SER n 2 8 PRO n 2 9 ARG n 2 10 PRO n 2 11 THR n 2 12 SER n 2 13 HIS n 2 14 PRO n 2 15 ARG n 2 16 PRO n 2 17 ILE n 2 18 ARG n 2 19 VAL n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 371 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene Amuc_1119 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Akkermansia muciniphila ATCC BAA-835' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 349741 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 19 _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # _pdbx_entity_branch.entity_id 3 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 3 DGalpb1-3DGalpNAca1- 'Glycam Condensed Sequence' GMML 1.0 2 3 'WURCS=2.0/2,2,1/[a2112h-1a_1-5_2*NCC/3=O][a2112h-1b_1-5]/1-2/a3-b1' WURCS PDB2Glycan 1.1.0 3 3 '[]{[(3+1)][a-D-GalpNAc]{[(3+1)][b-D-Galp]{}}}' LINUCS PDB-CARE ? # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.entity_id 3 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.comp_id_1 GAL _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_2 A2G _pdbx_entity_branch_link.atom_id_2 O3 _pdbx_entity_branch_link.leaving_atom_id_2 HO3 _pdbx_entity_branch_link.value_order sing _pdbx_entity_branch_link.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A2G 'D-saccharide, alpha linking' . 2-acetamido-2-deoxy-alpha-D-galactopyranose ;N-acetyl-alpha-D-galactosamine; 2-acetamido-2-deoxy-alpha-D-galactose; 2-acetamido-2-deoxy-D-galactose; 2-acetamido-2-deoxy-galactose; N-ACETYL-2-DEOXY-2-AMINO-GALACTOSE ; 'C8 H15 N O6' 221.208 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GAL 'D-saccharide, beta linking' . beta-D-galactopyranose 'beta-D-galactose; D-galactose; galactose' 'C6 H12 O6' 180.156 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A2G 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGalpNAca A2G 'COMMON NAME' GMML 1.0 N-acetyl-a-D-galactopyranosamine A2G 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-GalpNAc A2G 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GalNAc GAL 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGalpb GAL 'COMMON NAME' GMML 1.0 b-D-galactopyranose GAL 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Galp GAL 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Gal # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 24 ? ? ? A . n A 1 2 GLU 2 25 ? ? ? A . n A 1 3 VAL 3 26 26 VAL VAL A . n A 1 4 THR 4 27 27 THR THR A . n A 1 5 VAL 5 28 28 VAL VAL A . n A 1 6 PRO 6 29 29 PRO PRO A . n A 1 7 ASP 7 30 30 ASP ASP A . n A 1 8 ALA 8 31 31 ALA ALA A . n A 1 9 LEU 9 32 32 LEU LEU A . n A 1 10 LYS 10 33 33 LYS LYS A . n A 1 11 ASP 11 34 34 ASP ASP A . n A 1 12 ARG 12 35 35 ARG ARG A . n A 1 13 ILE 13 36 36 ILE ILE A . n A 1 14 ALA 14 37 37 ALA ALA A . n A 1 15 LEU 15 38 38 LEU LEU A . n A 1 16 LYS 16 39 39 LYS LYS A . n A 1 17 LYS 17 40 40 LYS LYS A . n A 1 18 THR 18 41 41 THR THR A . n A 1 19 ALA 19 42 42 ALA ALA A . n A 1 20 ARG 20 43 43 ARG ARG A . n A 1 21 GLN 21 44 44 GLN GLN A . n A 1 22 LEU 22 45 45 LEU LEU A . n A 1 23 ASN 23 46 46 ASN ASN A . n A 1 24 ILE 24 47 47 ILE ILE A . n A 1 25 VAL 25 48 48 VAL VAL A . n A 1 26 TYR 26 49 49 TYR TYR A . n A 1 27 PHE 27 50 50 PHE PHE A . n A 1 28 LEU 28 51 51 LEU LEU A . n A 1 29 GLY 29 52 52 GLY GLY A . n A 1 30 SER 30 53 53 SER SER A . n A 1 31 ASP 31 54 54 ASP ASP A . n A 1 32 THR 32 55 55 THR THR A . n A 1 33 GLU 33 56 56 GLU GLU A . n A 1 34 PRO 34 57 57 PRO PRO A . n A 1 35 VAL 35 58 58 VAL VAL A . n A 1 36 PRO 36 59 59 PRO PRO A . n A 1 37 ASP 37 60 60 ASP ASP A . n A 1 38 TYR 38 61 61 TYR TYR A . n A 1 39 GLU 39 62 62 GLU GLU A . n A 1 40 ARG 40 63 63 ARG ARG A . n A 1 41 ARG 41 64 64 ARG ARG A . n A 1 42 LEU 42 65 65 LEU LEU A . n A 1 43 SER 43 66 66 SER SER A . n A 1 44 GLU 44 67 67 GLU GLU A . n A 1 45 LEU 45 68 68 LEU LEU A . n A 1 46 LEU 46 69 69 LEU LEU A . n A 1 47 LEU 47 70 70 LEU LEU A . n A 1 48 TYR 48 71 71 TYR TYR A . n A 1 49 LEU 49 72 72 LEU LEU A . n A 1 50 GLN 50 73 73 GLN GLN A . n A 1 51 GLN 51 74 74 GLN GLN A . n A 1 52 PHE 52 75 75 PHE PHE A . n A 1 53 TYR 53 76 76 TYR TYR A . n A 1 54 GLY 54 77 77 GLY GLY A . n A 1 55 LYS 55 78 78 LYS LYS A . n A 1 56 GLU 56 79 79 GLU GLU A . n A 1 57 MET 57 80 80 MET MET A . n A 1 58 GLN 58 81 81 GLN GLN A . n A 1 59 ARG 59 82 82 ARG ARG A . n A 1 60 HIS 60 83 83 HIS HIS A . n A 1 61 GLY 61 84 84 GLY GLY A . n A 1 62 TYR 62 85 85 TYR TYR A . n A 1 63 GLY 63 86 86 GLY GLY A . n A 1 64 ALA 64 87 87 ALA ALA A . n A 1 65 ARG 65 88 88 ARG ARG A . n A 1 66 SER 66 89 89 SER SER A . n A 1 67 PHE 67 90 90 PHE PHE A . n A 1 68 GLY 68 91 91 GLY GLY A . n A 1 69 LEU 69 92 92 LEU LEU A . n A 1 70 ASP 70 93 93 ASP ASP A . n A 1 71 ILE 71 94 94 ILE ILE A . n A 1 72 LYS 72 95 95 LYS LYS A . n A 1 73 SER 73 96 96 SER SER A . n A 1 74 PRO 74 97 97 PRO PRO A . n A 1 75 GLY 75 98 98 GLY GLY A . n A 1 76 ARG 76 99 99 ARG ARG A . n A 1 77 VAL 77 100 100 VAL VAL A . n A 1 78 ASN 78 101 101 ASN ASN A . n A 1 79 ILE 79 102 102 ILE ILE A . n A 1 80 ILE 80 103 103 ILE ILE A . n A 1 81 GLU 81 104 104 GLU GLU A . n A 1 82 TYR 82 105 105 TYR TYR A . n A 1 83 LYS 83 106 106 LYS LYS A . n A 1 84 ALA 84 107 107 ALA ALA A . n A 1 85 LYS 85 108 108 LYS LYS A . n A 1 86 ASN 86 109 109 ASN ASN A . n A 1 87 PRO 87 110 110 PRO PRO A . n A 1 88 ALA 88 111 111 ALA ALA A . n A 1 89 ALA 89 112 112 ALA ALA A . n A 1 90 HIS 90 113 113 HIS HIS A . n A 1 91 TYR 91 114 114 TYR TYR A . n A 1 92 PRO 92 115 115 PRO PRO A . n A 1 93 TYR 93 116 116 TYR TYR A . n A 1 94 GLU 94 117 117 GLU GLU A . n A 1 95 ASN 95 118 118 ASN ASN A . n A 1 96 GLY 96 119 119 GLY GLY A . n A 1 97 GLY 97 120 120 GLY GLY A . n A 1 98 GLY 98 121 121 GLY GLY A . n A 1 99 TRP 99 122 122 TRP TRP A . n A 1 100 LYS 100 123 123 LYS LYS A . n A 1 101 ALA 101 124 124 ALA ALA A . n A 1 102 ALA 102 125 125 ALA ALA A . n A 1 103 GLN 103 126 126 GLN GLN A . n A 1 104 GLU 104 127 127 GLU GLU A . n A 1 105 LEU 105 128 128 LEU LEU A . n A 1 106 ASP 106 129 129 ASP ASP A . n A 1 107 GLU 107 130 130 GLU GLU A . n A 1 108 PHE 108 131 131 PHE PHE A . n A 1 109 PHE 109 132 132 PHE PHE A . n A 1 110 LYS 110 133 133 LYS LYS A . n A 1 111 ALA 111 134 134 ALA ALA A . n A 1 112 HIS 112 135 135 HIS HIS A . n A 1 113 PRO 113 136 136 PRO PRO A . n A 1 114 ASP 114 137 137 ASP ASP A . n A 1 115 ARG 115 138 138 ARG ARG A . n A 1 116 LYS 116 139 139 LYS LYS A . n A 1 117 LYS 117 140 140 LYS LYS A . n A 1 118 SER 118 141 141 SER SER A . n A 1 119 GLN 119 142 142 GLN GLN A . n A 1 120 HIS 120 143 143 HIS HIS A . n A 1 121 THR 121 144 144 THR THR A . n A 1 122 LEU 122 145 145 LEU LEU A . n A 1 123 ILE 123 146 146 ILE ILE A . n A 1 124 ILE 124 147 147 ILE ILE A . n A 1 125 MET 125 148 148 MET MET A . n A 1 126 PRO 126 149 149 PRO PRO A . n A 1 127 THR 127 150 150 THR THR A . n A 1 128 TRP 128 151 151 TRP TRP A . n A 1 129 ASN 129 152 152 ASN ASN A . n A 1 130 ASP 130 153 153 ASP ASP A . n A 1 131 GLU 131 154 154 GLU GLU A . n A 1 132 LYS 132 155 155 LYS LYS A . n A 1 133 ASN 133 156 156 ASN ASN A . n A 1 134 GLY 134 157 157 GLY GLY A . n A 1 135 PRO 135 158 158 PRO PRO A . n A 1 136 ASP 136 159 159 ASP ASP A . n A 1 137 ASN 137 160 160 ASN ASN A . n A 1 138 PRO 138 161 161 PRO PRO A . n A 1 139 GLY 139 162 162 GLY GLY A . n A 1 140 GLY 140 163 163 GLY GLY A . n A 1 141 VAL 141 164 164 VAL VAL A . n A 1 142 PRO 142 165 165 PRO PRO A . n A 1 143 PHE 143 166 166 PHE PHE A . n A 1 144 TYR 144 167 167 TYR TYR A . n A 1 145 GLY 145 168 168 GLY GLY A . n A 1 146 MET 146 169 169 MET MET A . n A 1 147 GLY 147 170 170 GLY GLY A . n A 1 148 ARG 148 171 171 ARG ARG A . n A 1 149 ASN 149 172 172 ASN ASN A . n A 1 150 CYS 150 173 173 CYS CYS A . n A 1 151 PHE 151 174 174 PHE PHE A . n A 1 152 ALA 152 175 175 ALA ALA A . n A 1 153 LEU 153 176 176 LEU LEU A . n A 1 154 ASP 154 177 177 ASP ASP A . n A 1 155 TYR 155 178 178 TYR TYR A . n A 1 156 PRO 156 179 179 PRO PRO A . n A 1 157 ALA 157 180 180 ALA ALA A . n A 1 158 PHE 158 181 181 PHE PHE A . n A 1 159 ASP 159 182 182 ASP ASP A . n A 1 160 ILE 160 183 183 ILE ILE A . n A 1 161 LYS 161 184 184 LYS LYS A . n A 1 162 HIS 162 185 185 HIS HIS A . n A 1 163 LEU 163 186 186 LEU LEU A . n A 1 164 GLY 164 187 187 GLY GLY A . n A 1 165 GLN 165 188 188 GLN GLN A . n A 1 166 LYS 166 189 189 LYS LYS A . n A 1 167 THR 167 190 190 THR THR A . n A 1 168 ARG 168 191 191 ARG ARG A . n A 1 169 GLU 169 192 192 GLU GLU A . n A 1 170 GLY 170 193 193 GLY GLY A . n A 1 171 ARG 171 194 194 ARG ARG A . n A 1 172 LEU 172 195 195 LEU LEU A . n A 1 173 LEU 173 196 196 LEU LEU A . n A 1 174 THR 174 197 197 THR THR A . n A 1 175 LYS 175 198 198 LYS LYS A . n A 1 176 TRP 176 199 199 TRP TRP A . n A 1 177 TYR 177 200 200 TYR TYR A . n A 1 178 GLY 178 201 201 GLY GLY A . n A 1 179 GLY 179 202 202 GLY GLY A . n A 1 180 MET 180 203 203 MET MET A . n A 1 181 ALA 181 204 204 ALA ALA A . n A 1 182 ALA 182 205 205 ALA ALA A . n A 1 183 ALA 183 206 206 ALA ALA A . n A 1 184 LEU 184 207 207 LEU LEU A . n A 1 185 GLY 185 208 208 GLY GLY A . n A 1 186 HIS 186 209 209 HIS HIS A . n A 1 187 GLY 187 210 210 GLY GLY A . n A 1 188 LEU 188 211 211 LEU LEU A . n A 1 189 ASN 189 212 212 ASN ASN A . n A 1 190 LEU 190 213 213 LEU LEU A . n A 1 191 PRO 191 214 214 PRO PRO A . n A 1 192 HIS 192 215 215 HIS HIS A . n A 1 193 ASN 193 216 216 ASN ASN A . n A 1 194 HIS 194 217 217 HIS HIS A . n A 1 195 GLN 195 218 218 GLN GLN A . n A 1 196 THR 196 219 219 THR THR A . n A 1 197 ALA 197 220 220 ALA ALA A . n A 1 198 SER 198 221 221 SER SER A . n A 1 199 ASP 199 222 222 ASP ASP A . n A 1 200 GLY 200 223 223 GLY GLY A . n A 1 201 LYS 201 224 224 LYS LYS A . n A 1 202 LYS 202 225 225 LYS LYS A . n A 1 203 TYR 203 226 226 TYR TYR A . n A 1 204 GLY 204 227 227 GLY GLY A . n A 1 205 THR 205 228 228 THR THR A . n A 1 206 ALA 206 229 229 ALA ALA A . n A 1 207 LEU 207 230 230 LEU LEU A . n A 1 208 MET 208 231 231 MET MET A . n A 1 209 GLY 209 232 232 GLY GLY A . n A 1 210 SER 210 233 233 SER SER A . n A 1 211 GLY 211 234 234 GLY GLY A . n A 1 212 ASN 212 235 235 ASN ASN A . n A 1 213 TYR 213 236 236 TYR TYR A . n A 1 214 THR 214 237 237 THR THR A . n A 1 215 PHE 215 238 238 PHE PHE A . n A 1 216 GLY 216 239 239 GLY GLY A . n A 1 217 THR 217 240 240 THR THR A . n A 1 218 SER 218 241 241 SER SER A . n A 1 219 PRO 219 242 242 PRO PRO A . n A 1 220 THR 220 243 243 THR THR A . n A 1 221 PHE 221 244 244 PHE PHE A . n A 1 222 LEU 222 245 245 LEU LEU A . n A 1 223 THR 223 246 246 THR THR A . n A 1 224 PRO 224 247 247 PRO PRO A . n A 1 225 ALA 225 248 248 ALA ALA A . n A 1 226 SER 226 249 249 SER SER A . n A 1 227 CYS 227 250 250 CYS CYS A . n A 1 228 ALA 228 251 251 ALA ALA A . n A 1 229 LEU 229 252 252 LEU LEU A . n A 1 230 LEU 230 253 253 LEU LEU A . n A 1 231 ASP 231 254 254 ASP ASP A . n A 1 232 ALA 232 255 255 ALA ALA A . n A 1 233 CYS 233 256 256 CYS CYS A . n A 1 234 GLU 234 257 257 GLU GLU A . n A 1 235 VAL 235 258 258 VAL VAL A . n A 1 236 PHE 236 259 259 PHE PHE A . n A 1 237 SER 237 260 260 SER SER A . n A 1 238 VAL 238 261 261 VAL VAL A . n A 1 239 THR 239 262 262 THR THR A . n A 1 240 PRO 240 263 263 PRO PRO A . n A 1 241 SER 241 264 264 SER SER A . n A 1 242 GLN 242 265 265 GLN GLN A . n A 1 243 GLN 243 266 266 GLN GLN A . n A 1 244 PHE 244 267 267 PHE PHE A . n A 1 245 TYR 245 268 268 TYR TYR A . n A 1 246 GLU 246 269 269 GLU GLU A . n A 1 247 GLY 247 270 270 GLY GLY A . n A 1 248 LYS 248 271 271 LYS LYS A . n A 1 249 PRO 249 272 272 PRO PRO A . n A 1 250 GLU 250 273 273 GLU GLU A . n A 1 251 VAL 251 274 274 VAL VAL A . n A 1 252 GLU 252 275 275 GLU GLU A . n A 1 253 VAL 253 276 276 VAL VAL A . n A 1 254 GLY 254 277 277 GLY GLY A . n A 1 255 ASP 255 278 278 ASP ASP A . n A 1 256 VAL 256 279 279 VAL VAL A . n A 1 257 ALA 257 280 280 ALA ALA A . n A 1 258 ILE 258 281 281 ILE ILE A . n A 1 259 SER 259 282 282 SER SER A . n A 1 260 PHE 260 283 283 PHE PHE A . n A 1 261 LYS 261 284 284 LYS LYS A . n A 1 262 GLY 262 285 285 GLY GLY A . n A 1 263 ASP 263 286 286 ASP ASP A . n A 1 264 GLN 264 287 287 GLN GLN A . n A 1 265 ILE 265 288 288 ILE ILE A . n A 1 266 LEU 266 289 289 LEU LEU A . n A 1 267 VAL 267 290 290 VAL VAL A . n A 1 268 SER 268 291 291 SER SER A . n A 1 269 GLY 269 292 292 GLY GLY A . n A 1 270 ASN 270 293 293 ASN ASN A . n A 1 271 TYR 271 294 294 TYR TYR A . n A 1 272 LYS 272 295 295 LYS LYS A . n A 1 273 SER 273 296 296 SER SER A . n A 1 274 PRO 274 297 297 PRO PRO A . n A 1 275 GLN 275 298 298 GLN GLN A . n A 1 276 THR 276 299 299 THR THR A . n A 1 277 VAL 277 300 300 VAL VAL A . n A 1 278 LYS 278 301 301 LYS LYS A . n A 1 279 ALA 279 302 302 ALA ALA A . n A 1 280 LEU 280 303 303 LEU LEU A . n A 1 281 ASN 281 304 304 ASN ASN A . n A 1 282 VAL 282 305 305 VAL VAL A . n A 1 283 TYR 283 306 306 TYR TYR A . n A 1 284 ILE 284 307 307 ILE ILE A . n A 1 285 GLN 285 308 308 GLN GLN A . n A 1 286 ASP 286 309 309 ASP ASP A . n A 1 287 PRO 287 310 310 PRO PRO A . n A 1 288 PRO 288 311 311 PRO PRO A . n A 1 289 TYR 289 312 312 TYR TYR A . n A 1 290 ALA 290 313 313 ALA ALA A . n A 1 291 VAL 291 314 314 VAL VAL A . n A 1 292 ASN 292 315 315 ASN ASN A . n A 1 293 GLN 293 316 316 GLN GLN A . n A 1 294 ASP 294 317 317 ASP ASP A . n A 1 295 TYR 295 318 318 TYR TYR A . n A 1 296 ASP 296 319 319 ASP ASP A . n A 1 297 ALA 297 320 320 ALA ALA A . n A 1 298 VAL 298 321 321 VAL VAL A . n A 1 299 SER 299 322 322 SER SER A . n A 1 300 PHE 300 323 323 PHE PHE A . n A 1 301 SER 301 324 324 SER SER A . n A 1 302 ARG 302 325 325 ARG ARG A . n A 1 303 ARG 303 326 326 ARG ARG A . n A 1 304 LEU 304 327 327 LEU LEU A . n A 1 305 GLY 305 328 328 GLY GLY A . n A 1 306 LYS 306 329 329 LYS LYS A . n A 1 307 LYS 307 330 330 LYS LYS A . n A 1 308 SER 308 331 331 SER SER A . n A 1 309 GLY 309 332 332 GLY GLY A . n A 1 310 LYS 310 333 333 LYS LYS A . n A 1 311 PHE 311 334 334 PHE PHE A . n A 1 312 SER 312 335 335 SER SER A . n A 1 313 MET 313 336 336 MET MET A . n A 1 314 LYS 314 337 337 LYS LYS A . n A 1 315 ILE 315 338 338 ILE ILE A . n A 1 316 ASP 316 339 339 ASP ASP A . n A 1 317 LYS 317 340 340 LYS LYS A . n A 1 318 LYS 318 341 341 LYS LYS A . n A 1 319 GLU 319 342 342 GLU GLU A . n A 1 320 LEU 320 343 343 LEU LEU A . n A 1 321 GLU 321 344 344 GLU GLU A . n A 1 322 GLY 322 345 345 GLY GLY A . n A 1 323 LEU 323 346 346 LEU LEU A . n A 1 324 ASN 324 347 347 ASN ASN A . n A 1 325 ASN 325 348 348 ASN ASN A . n A 1 326 ASN 326 349 349 ASN ASN A . n A 1 327 GLU 327 350 350 GLU GLU A . n A 1 328 PHE 328 351 351 PHE PHE A . n A 1 329 ARG 329 352 352 ARG ARG A . n A 1 330 ILE 330 353 353 ILE ILE A . n A 1 331 SER 331 354 354 SER SER A . n A 1 332 LEU 332 355 355 LEU LEU A . n A 1 333 MET 333 356 356 MET MET A . n A 1 334 PHE 334 357 357 PHE PHE A . n A 1 335 ILE 335 358 358 ILE ILE A . n A 1 336 LEU 336 359 359 LEU LEU A . n A 1 337 ALA 337 360 360 ALA ALA A . n A 1 338 ASN 338 361 361 ASN ASN A . n A 1 339 GLY 339 362 362 GLY GLY A . n A 1 340 LEU 340 363 363 LEU LEU A . n A 1 341 HIS 341 364 364 HIS HIS A . n A 1 342 MET 342 365 365 MET MET A . n A 1 343 GLN 343 366 366 GLN GLN A . n A 1 344 LYS 344 367 367 LYS LYS A . n A 1 345 HIS 345 368 368 HIS HIS A . n A 1 346 PHE 346 369 369 PHE PHE A . n A 1 347 THR 347 370 370 THR THR A . n A 1 348 PHE 348 371 371 PHE PHE A . n A 1 349 HIS 349 372 372 HIS HIS A . n A 1 350 TRP 350 373 373 TRP TRP A . n A 1 351 ASP 351 374 374 ASP ASP A . n A 1 352 ALA 352 375 375 ALA ALA A . n A 1 353 LEU 353 376 376 LEU LEU A . n A 1 354 GLN 354 377 377 GLN GLN A . n A 1 355 ASP 355 378 378 ASP ASP A . n A 1 356 TYR 356 379 379 TYR TYR A . n A 1 357 ARG 357 380 380 ARG ARG A . n A 1 358 ASP 358 381 381 ASP ASP A . n A 1 359 GLY 359 382 ? ? ? A . n A 1 360 SER 360 383 ? ? ? A . n A 1 361 LYS 361 384 ? ? ? A . n A 1 362 SER 362 385 ? ? ? A . n A 1 363 GLY 363 386 ? ? ? A . n A 1 364 SER 364 387 ? ? ? A . n A 1 365 GLY 365 388 ? ? ? A . n A 1 366 HIS 366 389 ? ? ? A . n A 1 367 HIS 367 390 ? ? ? A . n A 1 368 HIS 368 391 ? ? ? A . n A 1 369 HIS 369 392 ? ? ? A . n A 1 370 HIS 370 393 ? ? ? A . n A 1 371 HIS 371 394 ? ? ? A . n B 2 1 GLY 1 -2 ? ? ? C . n B 2 2 LYS 2 -1 ? ? ? C . n B 2 3 PRO 3 0 ? ? ? C . n B 2 4 ARG 4 1 1 ARG ARG C . n B 2 5 PRO 5 2 2 PRO PRO C . n B 2 6 TYR 6 3 3 TYR TYR C . n B 2 7 SER 7 4 4 SER SER C . n B 2 8 PRO 8 5 5 PRO PRO C . n B 2 9 ARG 9 6 6 ARG ARG C . n B 2 10 PRO 10 7 7 PRO PRO C . n B 2 11 THR 11 8 8 THR THR C . n B 2 12 SER 12 9 9 SER SER C . n B 2 13 HIS 13 10 10 HIS HIS C . n B 2 14 PRO 14 11 ? ? ? C . n B 2 15 ARG 15 12 ? ? ? C . n B 2 16 PRO 16 13 ? ? ? C . n B 2 17 ILE 17 14 ? ? ? C . n B 2 18 ARG 18 15 ? ? ? C . n B 2 19 VAL 19 16 ? ? ? C . n # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero C 3 A2G 1 B A2G 1 C A2G 15 n C 3 GAL 2 B GAL 2 C GAL 16 n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 CA 1 401 1 CA CA A . E 5 HOH 1 501 35 HOH HOH A . E 5 HOH 2 502 5 HOH HOH A . E 5 HOH 3 503 4 HOH HOH A . E 5 HOH 4 504 39 HOH HOH A . E 5 HOH 5 505 44 HOH HOH A . E 5 HOH 6 506 13 HOH HOH A . E 5 HOH 7 507 56 HOH HOH A . E 5 HOH 8 508 6 HOH HOH A . E 5 HOH 9 509 16 HOH HOH A . E 5 HOH 10 510 11 HOH HOH A . E 5 HOH 11 511 14 HOH HOH A . E 5 HOH 12 512 33 HOH HOH A . E 5 HOH 13 513 9 HOH HOH A . E 5 HOH 14 514 8 HOH HOH A . E 5 HOH 15 515 40 HOH HOH A . E 5 HOH 16 516 24 HOH HOH A . E 5 HOH 17 517 10 HOH HOH A . E 5 HOH 18 518 25 HOH HOH A . E 5 HOH 19 519 30 HOH HOH A . E 5 HOH 20 520 3 HOH HOH A . E 5 HOH 21 521 65 HOH HOH A . E 5 HOH 22 522 2 HOH HOH A . E 5 HOH 23 523 19 HOH HOH A . E 5 HOH 24 524 46 HOH HOH A . E 5 HOH 25 525 32 HOH HOH A . E 5 HOH 26 526 50 HOH HOH A . E 5 HOH 27 527 89 HOH HOH A . E 5 HOH 28 528 7 HOH HOH A . E 5 HOH 29 529 72 HOH HOH A . E 5 HOH 30 530 26 HOH HOH A . E 5 HOH 31 531 27 HOH HOH A . E 5 HOH 32 532 57 HOH HOH A . E 5 HOH 33 533 47 HOH HOH A . E 5 HOH 34 534 67 HOH HOH A . E 5 HOH 35 535 90 HOH HOH A . E 5 HOH 36 536 43 HOH HOH A . E 5 HOH 37 537 45 HOH HOH A . F 5 HOH 1 201 23 HOH HOH C . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 33 ? CG ? A LYS 10 CG 2 1 Y 1 A LYS 33 ? CD ? A LYS 10 CD 3 1 Y 1 A LYS 33 ? CE ? A LYS 10 CE 4 1 Y 1 A LYS 33 ? NZ ? A LYS 10 NZ 5 1 Y 1 A ASP 34 ? CG ? A ASP 11 CG 6 1 Y 1 A ASP 34 ? OD1 ? A ASP 11 OD1 7 1 Y 1 A ASP 34 ? OD2 ? A ASP 11 OD2 8 1 Y 1 A GLU 130 ? CG ? A GLU 107 CG 9 1 Y 1 A GLU 130 ? CD ? A GLU 107 CD 10 1 Y 1 A GLU 130 ? OE1 ? A GLU 107 OE1 11 1 Y 1 A GLU 130 ? OE2 ? A GLU 107 OE2 12 1 Y 1 A LYS 133 ? CG ? A LYS 110 CG 13 1 Y 1 A LYS 133 ? CD ? A LYS 110 CD 14 1 Y 1 A LYS 133 ? CE ? A LYS 110 CE 15 1 Y 1 A LYS 133 ? NZ ? A LYS 110 NZ 16 1 Y 1 A LYS 271 ? CG ? A LYS 248 CG 17 1 Y 1 A LYS 271 ? CD ? A LYS 248 CD 18 1 Y 1 A LYS 271 ? CE ? A LYS 248 CE 19 1 Y 1 A LYS 271 ? NZ ? A LYS 248 NZ 20 1 Y 1 A GLU 275 ? CG ? A GLU 252 CG 21 1 Y 1 A GLU 275 ? CD ? A GLU 252 CD 22 1 Y 1 A GLU 275 ? OE1 ? A GLU 252 OE1 23 1 Y 1 A GLU 275 ? OE2 ? A GLU 252 OE2 24 1 Y 1 A LYS 284 ? CG ? A LYS 261 CG 25 1 Y 1 A LYS 284 ? CD ? A LYS 261 CD 26 1 Y 1 A LYS 284 ? CE ? A LYS 261 CE 27 1 Y 1 A LYS 284 ? NZ ? A LYS 261 NZ 28 1 Y 1 A GLN 287 ? CG ? A GLN 264 CG 29 1 Y 1 A GLN 287 ? CD ? A GLN 264 CD 30 1 Y 1 A GLN 287 ? OE1 ? A GLN 264 OE1 31 1 Y 1 A GLN 287 ? NE2 ? A GLN 264 NE2 32 1 Y 1 A LYS 295 ? CG ? A LYS 272 CG 33 1 Y 1 A LYS 295 ? CD ? A LYS 272 CD 34 1 Y 1 A LYS 295 ? CE ? A LYS 272 CE 35 1 Y 1 A LYS 295 ? NZ ? A LYS 272 NZ 36 1 Y 1 A VAL 314 ? CG1 ? A VAL 291 CG1 37 1 Y 1 A VAL 314 ? CG2 ? A VAL 291 CG2 38 1 Y 1 A ARG 325 ? CG ? A ARG 302 CG 39 1 Y 1 A ARG 325 ? CD ? A ARG 302 CD 40 1 Y 1 A ARG 325 ? NE ? A ARG 302 NE 41 1 Y 1 A ARG 325 ? CZ ? A ARG 302 CZ 42 1 Y 1 A ARG 325 ? NH1 ? A ARG 302 NH1 43 1 Y 1 A ARG 325 ? NH2 ? A ARG 302 NH2 44 1 Y 1 A LYS 340 ? CG ? A LYS 317 CG 45 1 Y 1 A LYS 340 ? CD ? A LYS 317 CD 46 1 Y 1 A LYS 340 ? CE ? A LYS 317 CE 47 1 Y 1 A LYS 340 ? NZ ? A LYS 317 NZ 48 1 Y 1 A LYS 341 ? CG ? A LYS 318 CG 49 1 Y 1 A LYS 341 ? CD ? A LYS 318 CD 50 1 Y 1 A LYS 341 ? CE ? A LYS 318 CE 51 1 Y 1 A LYS 341 ? NZ ? A LYS 318 NZ 52 1 Y 1 A ARG 380 ? CG ? A ARG 357 CG 53 1 Y 1 A ARG 380 ? CD ? A ARG 357 CD 54 1 Y 1 A ARG 380 ? NE ? A ARG 357 NE 55 1 Y 1 A ARG 380 ? CZ ? A ARG 357 CZ 56 1 Y 1 A ARG 380 ? NH1 ? A ARG 357 NH1 57 1 Y 1 A ARG 380 ? NH2 ? A ARG 357 NH2 58 1 Y 1 A ASP 381 ? CG ? A ASP 358 CG 59 1 Y 1 A ASP 381 ? OD1 ? A ASP 358 OD1 60 1 Y 1 A ASP 381 ? OD2 ? A ASP 358 OD2 61 1 Y 1 C ARG 1 ? CG ? B ARG 4 CG 62 1 Y 1 C ARG 1 ? CD ? B ARG 4 CD 63 1 Y 1 C ARG 1 ? NE ? B ARG 4 NE 64 1 Y 1 C ARG 1 ? CZ ? B ARG 4 CZ 65 1 Y 1 C ARG 1 ? NH1 ? B ARG 4 NH1 66 1 Y 1 C ARG 1 ? NH2 ? B ARG 4 NH2 67 1 Y 1 C TYR 3 ? CG ? B TYR 6 CG 68 1 Y 1 C TYR 3 ? CD1 ? B TYR 6 CD1 69 1 Y 1 C TYR 3 ? CD2 ? B TYR 6 CD2 70 1 Y 1 C TYR 3 ? CE1 ? B TYR 6 CE1 71 1 Y 1 C TYR 3 ? CE2 ? B TYR 6 CE2 72 1 Y 1 C TYR 3 ? CZ ? B TYR 6 CZ 73 1 Y 1 C TYR 3 ? OH ? B TYR 6 OH 74 1 Y 1 C HIS 10 ? CG ? B HIS 13 CG 75 1 Y 1 C HIS 10 ? ND1 ? B HIS 13 ND1 76 1 Y 1 C HIS 10 ? CD2 ? B HIS 13 CD2 77 1 Y 1 C HIS 10 ? CE1 ? B HIS 13 CE1 78 1 Y 1 C HIS 10 ? NE2 ? B HIS 13 NE2 # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.14_3260 1 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.25 2 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 3 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? . 5 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 6Z2P _cell.details ? _cell.formula_units_Z ? _cell.length_a 126.920 _cell.length_a_esd ? _cell.length_b 126.920 _cell.length_b_esd ? _cell.length_c 65.540 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6Z2P _symmetry.cell_setting ? _symmetry.Int_Tables_number 79 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 4' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6Z2P _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 3.16 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 61.1 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '100 mM MIB pH 5.0 and 25% (w/v) PEG 1,500' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS3 S 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2019-09-18 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.979181 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'ALBA BEAMLINE XALOC' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.979181 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline XALOC _diffrn_source.pdbx_synchrotron_site ALBA # _reflns.B_iso_Wilson_estimate 51.51 _reflns.entry_id 6Z2P _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.16 _reflns.d_resolution_low 44.8730 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 27920 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.02 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 2.0 _reflns.pdbx_Rmerge_I_obs 0.02598 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 14.42 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.03675 _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.992 _reflns.pdbx_CC_star 0.999 _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.16 _reflns_shell.d_res_low 2.238 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 1.39 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 2619 _reflns_shell.percent_possible_all 93.63 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.433 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 1.9 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all 0.6123 _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.433 _reflns_shell.pdbx_CC_star 0.695 _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max 105.490 _refine.B_iso_mean 54.1285 _refine.B_iso_min 31.060 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6Z2P _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.1600 _refine.ls_d_res_low 44.8730 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 27837 _refine.ls_number_reflns_R_free 2676 _refine.ls_number_reflns_R_work 50441 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 96.8100 _refine.ls_percent_reflns_R_free 5.0400 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2005 _refine.ls_R_factor_R_free 0.2319 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1988 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.120 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 6Z2D _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 28.5800 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.3200 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id final _refine_hist.details ? _refine_hist.d_res_high 2.1600 _refine_hist.d_res_low 44.8730 _refine_hist.number_atoms_solvent 38 _refine_hist.number_atoms_total 2897 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total 365 _refine_hist.pdbx_B_iso_mean_ligand 53.55 _refine_hist.pdbx_B_iso_mean_solvent 49.77 _refine_hist.pdbx_number_atoms_protein 2833 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 26 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.1605 2.1998 . . 120 2224 81.0000 . . . 0.3233 0.0000 0.3096 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.1998 2.2421 . . 144 2634 97.0000 . . . 0.3719 0.0000 0.3170 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.2421 2.2878 . . 140 2631 97.0000 . . . 0.3599 0.0000 0.3464 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.2878 2.3376 . . 147 2743 97.0000 . . . 0.3401 0.0000 0.3444 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.3376 2.3920 . . 141 2664 98.0000 . . . 0.3204 0.0000 0.2989 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.3920 2.4518 . . 137 2642 97.0000 . . . 0.3896 0.0000 0.2958 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.4518 2.5181 . . 144 2680 97.0000 . . . 0.3170 0.0000 0.2794 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.5181 2.5921 . . 142 2670 98.0000 . . . 0.3019 0.0000 0.2545 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.5921 2.6758 . . 140 2664 98.0000 . . . 0.2736 0.0000 0.2322 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.6758 2.7714 . . 143 2654 97.0000 . . . 0.2988 0.0000 0.2383 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.7714 2.8824 . . 143 2689 98.0000 . . . 0.2689 0.0000 0.2357 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.8824 3.0135 . . 142 2684 98.0000 . . . 0.3262 0.0000 0.2331 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.0135 3.1724 . . 147 2717 99.0000 . . . 0.2536 0.0000 0.2235 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.1724 3.3711 . . 138 2660 99.0000 . . . 0.2952 0.0000 0.2190 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.3711 3.6312 . . 139 2688 97.0000 . . . 0.2226 0.0000 0.2074 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.6312 3.9965 . . 139 2706 98.0000 . . . 0.1952 0.0000 0.1654 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.9965 4.5743 . . 143 2703 99.0000 . . . 0.1472 0.0000 0.1405 . . . . . . . . . . . 'X-RAY DIFFRACTION' 4.5743 5.7612 . . 141 2674 98.0000 . . . 0.1601 0.0000 0.1525 . . . . . . . . . . . 'X-RAY DIFFRACTION' 5.7612 44.8730 . . 146 2714 98.0000 . . . 0.2107 0.0000 0.1603 . . . . . . . . . . . # _struct.entry_id 6Z2P _struct.title ;Crystal structure of catalytic inactive OgpA from Akkermansia muciniphila in complex with an O-glycopeptide (glycodrosocin) substrate ; _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6Z2P _struct_keywords.text 'O-glycan endopeptidase, mucins, OgpA. metalloprotease, HYDROLASE' _struct_keywords.pdbx_keywords HYDROLASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP B2UR60_AKKM8 B2UR60 ? 1 ;EVTVPDALKDRIALKKTARQLNIVYFLGSDTEPVPDYERRLSELLLYLQQFYGKEMQRHGYGARSFGLDIKSPGRVNIIE YKAKNPAAHYPYENGGGWKAAQELDEFFKAHPDRKKSQHTLIIMPTWNDEKNGPDNPGGVPFYGMGRNCFALDYPAFDIK HLGQKTREGRLLTKWYGGMAHELGHGLNLPHNHQTASDGKKYGTALMGSGNYTFGTSPTFLTPASCALLDACEVFSVTPS QQFYEGKPEVEVGDVAISFKGDQILVSGNYKSPQTVKALNVYIQDPPYAVNQDYDAVSFSRRLGKKSGKFSMKIDKKELE GLNNNEFRISLMFILANGLHMQKHFTFHWDALQDYRDGSKS ; 25 2 PDB 6Z2P 6Z2P ? 2 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 6Z2P A 2 ? 362 ? B2UR60 25 ? 385 ? 25 385 2 2 6Z2P C 1 ? 19 ? 6Z2P -2 ? 16 ? -2 16 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 6Z2P MET A 1 ? UNP B2UR60 ? ? 'initiating methionine' 24 1 1 6Z2P ALA A 182 ? UNP B2UR60 HIS 205 'engineered mutation' 205 2 1 6Z2P ALA A 183 ? UNP B2UR60 GLU 206 'engineered mutation' 206 3 1 6Z2P GLY A 363 ? UNP B2UR60 ? ? 'expression tag' 386 4 1 6Z2P SER A 364 ? UNP B2UR60 ? ? 'expression tag' 387 5 1 6Z2P GLY A 365 ? UNP B2UR60 ? ? 'expression tag' 388 6 1 6Z2P HIS A 366 ? UNP B2UR60 ? ? 'expression tag' 389 7 1 6Z2P HIS A 367 ? UNP B2UR60 ? ? 'expression tag' 390 8 1 6Z2P HIS A 368 ? UNP B2UR60 ? ? 'expression tag' 391 9 1 6Z2P HIS A 369 ? UNP B2UR60 ? ? 'expression tag' 392 10 1 6Z2P HIS A 370 ? UNP B2UR60 ? ? 'expression tag' 393 11 1 6Z2P HIS A 371 ? UNP B2UR60 ? ? 'expression tag' 394 12 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2030 ? 1 MORE -4 ? 1 'SSA (A^2)' 15840 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 PRO A 6 ? LYS A 10 ? PRO A 29 LYS A 33 5 ? 5 HELX_P HELX_P2 AA2 ASP A 37 ? HIS A 60 ? ASP A 60 HIS A 83 1 ? 24 HELX_P HELX_P3 AA3 PRO A 87 ? TYR A 91 ? PRO A 110 TYR A 114 5 ? 5 HELX_P HELX_P4 AA4 GLY A 96 ? HIS A 112 ? GLY A 119 HIS A 135 1 ? 17 HELX_P HELX_P5 AA5 PRO A 113 ? LYS A 116 ? PRO A 136 LYS A 139 5 ? 4 HELX_P HELX_P6 AA6 ASP A 159 ? LEU A 163 ? ASP A 182 LEU A 186 5 ? 5 HELX_P HELX_P7 AA7 THR A 167 ? LEU A 188 ? THR A 190 LEU A 211 1 ? 22 HELX_P HELX_P8 AA8 THR A 196 ? GLY A 204 ? THR A 219 GLY A 227 1 ? 9 HELX_P HELX_P9 AA9 SER A 210 ? THR A 214 ? SER A 233 THR A 237 5 ? 5 HELX_P HELX_P10 AB1 THR A 223 ? ASP A 231 ? THR A 246 ASP A 254 1 ? 9 HELX_P HELX_P11 AB2 ALA A 232 ? SER A 237 ? ALA A 255 SER A 260 5 ? 6 HELX_P HELX_P12 AB3 LYS A 318 ? LEU A 320 ? LYS A 341 LEU A 343 5 ? 3 HELX_P HELX_P13 AB4 ASP A 351 ? LEU A 353 ? ASP A 374 LEU A 376 5 ? 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale one ? B THR 11 OG1 ? ? ? 1_555 C A2G . C1 ? ? C THR 8 B A2G 1 1_555 ? ? ? ? ? ? ? 1.420 ? O-Glycosylation covale2 covale both ? C A2G . O3 ? ? ? 1_555 C GAL . C1 ? ? B A2G 1 B GAL 2 1_555 ? ? ? ? ? ? ? 1.406 ? ? metalc1 metalc ? ? A GLN 285 OE1 ? ? ? 1_555 D CA . CA ? ? A GLN 308 A CA 401 1_555 ? ? ? ? ? ? ? 2.437 ? ? metalc2 metalc ? ? A ASP 286 O ? ? ? 1_555 D CA . CA ? ? A ASP 309 A CA 401 1_555 ? ? ? ? ? ? ? 2.441 ? ? metalc3 metalc ? ? A PRO 288 O ? ? ? 1_555 D CA . CA ? ? A PRO 311 A CA 401 1_555 ? ? ? ? ? ? ? 2.575 ? ? metalc4 metalc ? ? A GLN 293 O ? ? ? 1_555 D CA . CA ? ? A GLN 316 A CA 401 1_555 ? ? ? ? ? ? ? 2.484 ? ? metalc5 metalc ? ? A ASP 296 OD2 ? ? ? 1_555 D CA . CA ? ? A ASP 319 A CA 401 1_555 ? ? ? ? ? ? ? 2.610 ? ? metalc6 metalc ? ? D CA . CA ? ? ? 1_555 E HOH . O ? ? A CA 401 A HOH 535 1_555 ? ? ? ? ? ? ? 2.478 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OE1 ? A GLN 285 ? A GLN 308 ? 1_555 CA ? D CA . ? A CA 401 ? 1_555 O ? A ASP 286 ? A ASP 309 ? 1_555 91.2 ? 2 OE1 ? A GLN 285 ? A GLN 308 ? 1_555 CA ? D CA . ? A CA 401 ? 1_555 O ? A PRO 288 ? A PRO 311 ? 1_555 95.2 ? 3 O ? A ASP 286 ? A ASP 309 ? 1_555 CA ? D CA . ? A CA 401 ? 1_555 O ? A PRO 288 ? A PRO 311 ? 1_555 83.8 ? 4 OE1 ? A GLN 285 ? A GLN 308 ? 1_555 CA ? D CA . ? A CA 401 ? 1_555 O ? A GLN 293 ? A GLN 316 ? 1_555 101.9 ? 5 O ? A ASP 286 ? A ASP 309 ? 1_555 CA ? D CA . ? A CA 401 ? 1_555 O ? A GLN 293 ? A GLN 316 ? 1_555 162.0 ? 6 O ? A PRO 288 ? A PRO 311 ? 1_555 CA ? D CA . ? A CA 401 ? 1_555 O ? A GLN 293 ? A GLN 316 ? 1_555 82.8 ? 7 OE1 ? A GLN 285 ? A GLN 308 ? 1_555 CA ? D CA . ? A CA 401 ? 1_555 OD2 ? A ASP 296 ? A ASP 319 ? 1_555 98.5 ? 8 O ? A ASP 286 ? A ASP 309 ? 1_555 CA ? D CA . ? A CA 401 ? 1_555 OD2 ? A ASP 296 ? A ASP 319 ? 1_555 112.6 ? 9 O ? A PRO 288 ? A PRO 311 ? 1_555 CA ? D CA . ? A CA 401 ? 1_555 OD2 ? A ASP 296 ? A ASP 319 ? 1_555 158.3 ? 10 O ? A GLN 293 ? A GLN 316 ? 1_555 CA ? D CA . ? A CA 401 ? 1_555 OD2 ? A ASP 296 ? A ASP 319 ? 1_555 77.9 ? 11 OE1 ? A GLN 285 ? A GLN 308 ? 1_555 CA ? D CA . ? A CA 401 ? 1_555 O ? E HOH . ? A HOH 535 ? 1_555 172.8 ? 12 O ? A ASP 286 ? A ASP 309 ? 1_555 CA ? D CA . ? A CA 401 ? 1_555 O ? E HOH . ? A HOH 535 ? 1_555 90.9 ? 13 O ? A PRO 288 ? A PRO 311 ? 1_555 CA ? D CA . ? A CA 401 ? 1_555 O ? E HOH . ? A HOH 535 ? 1_555 91.9 ? 14 O ? A GLN 293 ? A GLN 316 ? 1_555 CA ? D CA . ? A CA 401 ? 1_555 O ? E HOH . ? A HOH 535 ? 1_555 77.6 ? 15 OD2 ? A ASP 296 ? A ASP 319 ? 1_555 CA ? D CA . ? A CA 401 ? 1_555 O ? E HOH . ? A HOH 535 ? 1_555 74.4 ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id PRO _struct_mon_prot_cis.label_seq_id 287 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id PRO _struct_mon_prot_cis.auth_seq_id 310 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 288 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 311 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -1.52 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 3 ? AA2 ? 6 ? AA3 ? 2 ? AA4 ? 2 ? AA5 ? 3 ? AA6 ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? parallel AA1 2 3 ? parallel AA2 1 2 ? parallel AA2 2 3 ? parallel AA2 3 4 ? parallel AA2 4 5 ? anti-parallel AA2 5 6 ? anti-parallel AA3 1 2 ? anti-parallel AA4 1 2 ? parallel AA5 1 2 ? anti-parallel AA5 2 3 ? anti-parallel AA6 1 2 ? anti-parallel AA6 2 3 ? anti-parallel AA6 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 GLY A 68 ? LEU A 69 ? GLY A 91 LEU A 92 AA1 2 GLN A 21 ? LEU A 28 ? GLN A 44 LEU A 51 AA1 3 ILE A 80 ? LYS A 83 ? ILE A 103 LYS A 106 AA2 1 GLY A 68 ? LEU A 69 ? GLY A 91 LEU A 92 AA2 2 GLN A 21 ? LEU A 28 ? GLN A 44 LEU A 51 AA2 3 THR A 121 ? PRO A 126 ? THR A 144 PRO A 149 AA2 4 ASN A 149 ? ASP A 154 ? ASN A 172 ASP A 177 AA2 5 TYR A 144 ? MET A 146 ? TYR A 167 MET A 169 AA2 6 ARG B 9 ? PRO B 10 ? ARG C 6 PRO C 7 AA3 1 ILE A 71 ? SER A 73 ? ILE A 94 SER A 96 AA3 2 ARG A 76 ? VAL A 77 ? ARG A 99 VAL A 100 AA4 1 THR A 205 ? ALA A 206 ? THR A 228 ALA A 229 AA4 2 THR A 220 ? PHE A 221 ? THR A 243 PHE A 244 AA5 1 GLU A 252 ? LYS A 261 ? GLU A 275 LYS A 284 AA5 2 GLN A 264 ? GLN A 285 ? GLN A 287 GLN A 308 AA5 3 VAL A 298 ? ASP A 316 ? VAL A 321 ASP A 339 AA6 1 GLU A 252 ? LYS A 261 ? GLU A 275 LYS A 284 AA6 2 GLN A 264 ? GLN A 285 ? GLN A 287 GLN A 308 AA6 3 GLU A 327 ? LEU A 336 ? GLU A 350 LEU A 359 AA6 4 HIS A 341 ? HIS A 349 ? HIS A 364 HIS A 372 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O GLY A 68 ? O GLY A 91 N LEU A 22 ? N LEU A 45 AA1 2 3 N LEU A 28 ? N LEU A 51 O TYR A 82 ? O TYR A 105 AA2 1 2 O GLY A 68 ? O GLY A 91 N LEU A 22 ? N LEU A 45 AA2 2 3 N VAL A 25 ? N VAL A 48 O ILE A 124 ? O ILE A 147 AA2 3 4 N ILE A 123 ? N ILE A 146 O ALA A 152 ? O ALA A 175 AA2 4 5 O ASN A 149 ? O ASN A 172 N MET A 146 ? N MET A 169 AA2 5 6 N GLY A 145 ? N GLY A 168 O ARG B 9 ? O ARG C 6 AA3 1 2 N SER A 73 ? N SER A 96 O ARG A 76 ? O ARG A 99 AA4 1 2 N THR A 205 ? N THR A 228 O PHE A 221 ? O PHE A 244 AA5 1 2 N GLU A 252 ? N GLU A 275 O LYS A 272 ? O LYS A 295 AA5 2 3 N LEU A 280 ? N LEU A 303 O ARG A 302 ? O ARG A 325 AA6 1 2 N GLU A 252 ? N GLU A 275 O LYS A 272 ? O LYS A 295 AA6 2 3 N ASN A 281 ? N ASN A 304 O MET A 333 ? O MET A 356 AA6 3 4 N ILE A 330 ? N ILE A 353 O PHE A 346 ? O PHE A 369 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 141 ? ? 178.43 175.31 2 1 ASP A 153 ? ? -156.51 -157.25 3 1 PHE A 166 ? ? -164.33 77.59 4 1 ASN A 212 ? ? 83.20 20.74 5 1 LEU A 327 ? ? -124.31 -84.73 6 1 ALA A 375 ? ? -151.33 56.05 7 1 ARG A 380 ? ? -143.47 -7.78 # _pdbx_molecule_features.prd_id PRD_900084 _pdbx_molecule_features.name 'Thomsen-Friedenreich antigen' _pdbx_molecule_features.type Oligosaccharide _pdbx_molecule_features.class Antigen _pdbx_molecule_features.details oligosaccharide # _pdbx_molecule.instance_id 1 _pdbx_molecule.prd_id PRD_900084 _pdbx_molecule.asym_id C # _pdbx_entry_details.entry_id 6Z2P _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 24 ? A MET 1 2 1 Y 1 A GLU 25 ? A GLU 2 3 1 Y 1 A GLY 382 ? A GLY 359 4 1 Y 1 A SER 383 ? A SER 360 5 1 Y 1 A LYS 384 ? A LYS 361 6 1 Y 1 A SER 385 ? A SER 362 7 1 Y 1 A GLY 386 ? A GLY 363 8 1 Y 1 A SER 387 ? A SER 364 9 1 Y 1 A GLY 388 ? A GLY 365 10 1 Y 1 A HIS 389 ? A HIS 366 11 1 Y 1 A HIS 390 ? A HIS 367 12 1 Y 1 A HIS 391 ? A HIS 368 13 1 Y 1 A HIS 392 ? A HIS 369 14 1 Y 1 A HIS 393 ? A HIS 370 15 1 Y 1 A HIS 394 ? A HIS 371 16 1 Y 1 C GLY -2 ? B GLY 1 17 1 Y 1 C LYS -1 ? B LYS 2 18 1 Y 1 C PRO 0 ? B PRO 3 19 1 Y 1 C PRO 11 ? B PRO 14 20 1 Y 1 C ARG 12 ? B ARG 15 21 1 Y 1 C PRO 13 ? B PRO 16 22 1 Y 1 C ILE 14 ? B ILE 17 23 1 Y 1 C ARG 15 ? B ARG 18 24 1 Y 1 C VAL 16 ? B VAL 19 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A2G O5 O N N 1 A2G C1 C N S 2 A2G O1 O N N 3 A2G C2 C N R 4 A2G N2 N N N 5 A2G C3 C N R 6 A2G O3 O N N 7 A2G C4 C N R 8 A2G O4 O N N 9 A2G C5 C N R 10 A2G C6 C N N 11 A2G O6 O N N 12 A2G C7 C N N 13 A2G O7 O N N 14 A2G C8 C N N 15 A2G H1 H N N 16 A2G HO1 H N N 17 A2G H2 H N N 18 A2G HN2 H N N 19 A2G H3 H N N 20 A2G HO3 H N N 21 A2G H4 H N N 22 A2G HO4 H N N 23 A2G H5 H N N 24 A2G H61 H N N 25 A2G H81 H N N 26 A2G H82 H N N 27 A2G H83 H N N 28 A2G H62 H N N 29 A2G HO6 H N N 30 ALA N N N N 31 ALA CA C N S 32 ALA C C N N 33 ALA O O N N 34 ALA CB C N N 35 ALA OXT O N N 36 ALA H H N N 37 ALA H2 H N N 38 ALA HA H N N 39 ALA HB1 H N N 40 ALA HB2 H N N 41 ALA HB3 H N N 42 ALA HXT H N N 43 ARG N N N N 44 ARG CA C N S 45 ARG C C N N 46 ARG O O N N 47 ARG CB C N N 48 ARG CG C N N 49 ARG CD C N N 50 ARG NE N N N 51 ARG CZ C N N 52 ARG NH1 N N N 53 ARG NH2 N N N 54 ARG OXT O N N 55 ARG H H N N 56 ARG H2 H N N 57 ARG HA H N N 58 ARG HB2 H N N 59 ARG HB3 H N N 60 ARG HG2 H N N 61 ARG HG3 H N N 62 ARG HD2 H N N 63 ARG HD3 H N N 64 ARG HE H N N 65 ARG HH11 H N N 66 ARG HH12 H N N 67 ARG HH21 H N N 68 ARG HH22 H N N 69 ARG HXT H N N 70 ASN N N N N 71 ASN CA C N S 72 ASN C C N N 73 ASN O O N N 74 ASN CB C N N 75 ASN CG C N N 76 ASN OD1 O N N 77 ASN ND2 N N N 78 ASN OXT O N N 79 ASN H H N N 80 ASN H2 H N N 81 ASN HA H N N 82 ASN HB2 H N N 83 ASN HB3 H N N 84 ASN HD21 H N N 85 ASN HD22 H N N 86 ASN HXT H N N 87 ASP N N N N 88 ASP CA C N S 89 ASP C C N N 90 ASP O O N N 91 ASP CB C N N 92 ASP CG C N N 93 ASP OD1 O N N 94 ASP OD2 O N N 95 ASP OXT O N N 96 ASP H H N N 97 ASP H2 H N N 98 ASP HA H N N 99 ASP HB2 H N N 100 ASP HB3 H N N 101 ASP HD2 H N N 102 ASP HXT H N N 103 CA CA CA N N 104 CYS N N N N 105 CYS CA C N R 106 CYS C C N N 107 CYS O O N N 108 CYS CB C N N 109 CYS SG S N N 110 CYS OXT O N N 111 CYS H H N N 112 CYS H2 H N N 113 CYS HA H N N 114 CYS HB2 H N N 115 CYS HB3 H N N 116 CYS HG H N N 117 CYS HXT H N N 118 GAL C1 C N R 119 GAL C2 C N R 120 GAL C3 C N S 121 GAL C4 C N R 122 GAL C5 C N R 123 GAL C6 C N N 124 GAL O1 O N N 125 GAL O2 O N N 126 GAL O3 O N N 127 GAL O4 O N N 128 GAL O5 O N N 129 GAL O6 O N N 130 GAL H1 H N N 131 GAL H2 H N N 132 GAL H3 H N N 133 GAL H4 H N N 134 GAL H5 H N N 135 GAL H61 H N N 136 GAL H62 H N N 137 GAL HO1 H N N 138 GAL HO2 H N N 139 GAL HO3 H N N 140 GAL HO4 H N N 141 GAL HO6 H N N 142 GLN N N N N 143 GLN CA C N S 144 GLN C C N N 145 GLN O O N N 146 GLN CB C N N 147 GLN CG C N N 148 GLN CD C N N 149 GLN OE1 O N N 150 GLN NE2 N N N 151 GLN OXT O N N 152 GLN H H N N 153 GLN H2 H N N 154 GLN HA H N N 155 GLN HB2 H N N 156 GLN HB3 H N N 157 GLN HG2 H N N 158 GLN HG3 H N N 159 GLN HE21 H N N 160 GLN HE22 H N N 161 GLN HXT H N N 162 GLU N N N N 163 GLU CA C N S 164 GLU C C N N 165 GLU O O N N 166 GLU CB C N N 167 GLU CG C N N 168 GLU CD C N N 169 GLU OE1 O N N 170 GLU OE2 O N N 171 GLU OXT O N N 172 GLU H H N N 173 GLU H2 H N N 174 GLU HA H N N 175 GLU HB2 H N N 176 GLU HB3 H N N 177 GLU HG2 H N N 178 GLU HG3 H N N 179 GLU HE2 H N N 180 GLU HXT H N N 181 GLY N N N N 182 GLY CA C N N 183 GLY C C N N 184 GLY O O N N 185 GLY OXT O N N 186 GLY H H N N 187 GLY H2 H N N 188 GLY HA2 H N N 189 GLY HA3 H N N 190 GLY HXT H N N 191 HIS N N N N 192 HIS CA C N S 193 HIS C C N N 194 HIS O O N N 195 HIS CB C N N 196 HIS CG C Y N 197 HIS ND1 N Y N 198 HIS CD2 C Y N 199 HIS CE1 C Y N 200 HIS NE2 N Y N 201 HIS OXT O N N 202 HIS H H N N 203 HIS H2 H N N 204 HIS HA H N N 205 HIS HB2 H N N 206 HIS HB3 H N N 207 HIS HD1 H N N 208 HIS HD2 H N N 209 HIS HE1 H N N 210 HIS HE2 H N N 211 HIS HXT H N N 212 HOH O O N N 213 HOH H1 H N N 214 HOH H2 H N N 215 ILE N N N N 216 ILE CA C N S 217 ILE C C N N 218 ILE O O N N 219 ILE CB C N S 220 ILE CG1 C N N 221 ILE CG2 C N N 222 ILE CD1 C N N 223 ILE OXT O N N 224 ILE H H N N 225 ILE H2 H N N 226 ILE HA H N N 227 ILE HB H N N 228 ILE HG12 H N N 229 ILE HG13 H N N 230 ILE HG21 H N N 231 ILE HG22 H N N 232 ILE HG23 H N N 233 ILE HD11 H N N 234 ILE HD12 H N N 235 ILE HD13 H N N 236 ILE HXT H N N 237 LEU N N N N 238 LEU CA C N S 239 LEU C C N N 240 LEU O O N N 241 LEU CB C N N 242 LEU CG C N N 243 LEU CD1 C N N 244 LEU CD2 C N N 245 LEU OXT O N N 246 LEU H H N N 247 LEU H2 H N N 248 LEU HA H N N 249 LEU HB2 H N N 250 LEU HB3 H N N 251 LEU HG H N N 252 LEU HD11 H N N 253 LEU HD12 H N N 254 LEU HD13 H N N 255 LEU HD21 H N N 256 LEU HD22 H N N 257 LEU HD23 H N N 258 LEU HXT H N N 259 LYS N N N N 260 LYS CA C N S 261 LYS C C N N 262 LYS O O N N 263 LYS CB C N N 264 LYS CG C N N 265 LYS CD C N N 266 LYS CE C N N 267 LYS NZ N N N 268 LYS OXT O N N 269 LYS H H N N 270 LYS H2 H N N 271 LYS HA H N N 272 LYS HB2 H N N 273 LYS HB3 H N N 274 LYS HG2 H N N 275 LYS HG3 H N N 276 LYS HD2 H N N 277 LYS HD3 H N N 278 LYS HE2 H N N 279 LYS HE3 H N N 280 LYS HZ1 H N N 281 LYS HZ2 H N N 282 LYS HZ3 H N N 283 LYS HXT H N N 284 MET N N N N 285 MET CA C N S 286 MET C C N N 287 MET O O N N 288 MET CB C N N 289 MET CG C N N 290 MET SD S N N 291 MET CE C N N 292 MET OXT O N N 293 MET H H N N 294 MET H2 H N N 295 MET HA H N N 296 MET HB2 H N N 297 MET HB3 H N N 298 MET HG2 H N N 299 MET HG3 H N N 300 MET HE1 H N N 301 MET HE2 H N N 302 MET HE3 H N N 303 MET HXT H N N 304 PHE N N N N 305 PHE CA C N S 306 PHE C C N N 307 PHE O O N N 308 PHE CB C N N 309 PHE CG C Y N 310 PHE CD1 C Y N 311 PHE CD2 C Y N 312 PHE CE1 C Y N 313 PHE CE2 C Y N 314 PHE CZ C Y N 315 PHE OXT O N N 316 PHE H H N N 317 PHE H2 H N N 318 PHE HA H N N 319 PHE HB2 H N N 320 PHE HB3 H N N 321 PHE HD1 H N N 322 PHE HD2 H N N 323 PHE HE1 H N N 324 PHE HE2 H N N 325 PHE HZ H N N 326 PHE HXT H N N 327 PRO N N N N 328 PRO CA C N S 329 PRO C C N N 330 PRO O O N N 331 PRO CB C N N 332 PRO CG C N N 333 PRO CD C N N 334 PRO OXT O N N 335 PRO H H N N 336 PRO HA H N N 337 PRO HB2 H N N 338 PRO HB3 H N N 339 PRO HG2 H N N 340 PRO HG3 H N N 341 PRO HD2 H N N 342 PRO HD3 H N N 343 PRO HXT H N N 344 SER N N N N 345 SER CA C N S 346 SER C C N N 347 SER O O N N 348 SER CB C N N 349 SER OG O N N 350 SER OXT O N N 351 SER H H N N 352 SER H2 H N N 353 SER HA H N N 354 SER HB2 H N N 355 SER HB3 H N N 356 SER HG H N N 357 SER HXT H N N 358 THR N N N N 359 THR CA C N S 360 THR C C N N 361 THR O O N N 362 THR CB C N R 363 THR OG1 O N N 364 THR CG2 C N N 365 THR OXT O N N 366 THR H H N N 367 THR H2 H N N 368 THR HA H N N 369 THR HB H N N 370 THR HG1 H N N 371 THR HG21 H N N 372 THR HG22 H N N 373 THR HG23 H N N 374 THR HXT H N N 375 TRP N N N N 376 TRP CA C N S 377 TRP C C N N 378 TRP O O N N 379 TRP CB C N N 380 TRP CG C Y N 381 TRP CD1 C Y N 382 TRP CD2 C Y N 383 TRP NE1 N Y N 384 TRP CE2 C Y N 385 TRP CE3 C Y N 386 TRP CZ2 C Y N 387 TRP CZ3 C Y N 388 TRP CH2 C Y N 389 TRP OXT O N N 390 TRP H H N N 391 TRP H2 H N N 392 TRP HA H N N 393 TRP HB2 H N N 394 TRP HB3 H N N 395 TRP HD1 H N N 396 TRP HE1 H N N 397 TRP HE3 H N N 398 TRP HZ2 H N N 399 TRP HZ3 H N N 400 TRP HH2 H N N 401 TRP HXT H N N 402 TYR N N N N 403 TYR CA C N S 404 TYR C C N N 405 TYR O O N N 406 TYR CB C N N 407 TYR CG C Y N 408 TYR CD1 C Y N 409 TYR CD2 C Y N 410 TYR CE1 C Y N 411 TYR CE2 C Y N 412 TYR CZ C Y N 413 TYR OH O N N 414 TYR OXT O N N 415 TYR H H N N 416 TYR H2 H N N 417 TYR HA H N N 418 TYR HB2 H N N 419 TYR HB3 H N N 420 TYR HD1 H N N 421 TYR HD2 H N N 422 TYR HE1 H N N 423 TYR HE2 H N N 424 TYR HH H N N 425 TYR HXT H N N 426 VAL N N N N 427 VAL CA C N S 428 VAL C C N N 429 VAL O O N N 430 VAL CB C N N 431 VAL CG1 C N N 432 VAL CG2 C N N 433 VAL OXT O N N 434 VAL H H N N 435 VAL H2 H N N 436 VAL HA H N N 437 VAL HB H N N 438 VAL HG11 H N N 439 VAL HG12 H N N 440 VAL HG13 H N N 441 VAL HG21 H N N 442 VAL HG22 H N N 443 VAL HG23 H N N 444 VAL HXT H N N 445 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A2G O5 C5 sing N N 1 A2G C1 O5 sing N N 2 A2G C1 C2 sing N N 3 A2G C1 H1 sing N N 4 A2G O1 C1 sing N N 5 A2G O1 HO1 sing N N 6 A2G C2 C3 sing N N 7 A2G C2 H2 sing N N 8 A2G N2 C2 sing N N 9 A2G N2 HN2 sing N N 10 A2G C3 C4 sing N N 11 A2G C3 O3 sing N N 12 A2G C3 H3 sing N N 13 A2G O3 HO3 sing N N 14 A2G C4 O4 sing N N 15 A2G C4 H4 sing N N 16 A2G O4 HO4 sing N N 17 A2G C5 C4 sing N N 18 A2G C5 C6 sing N N 19 A2G C5 H5 sing N N 20 A2G C6 O6 sing N N 21 A2G C6 H61 sing N N 22 A2G C7 N2 sing N N 23 A2G O7 C7 doub N N 24 A2G C8 C7 sing N N 25 A2G C8 H81 sing N N 26 A2G C8 H82 sing N N 27 A2G C8 H83 sing N N 28 A2G C6 H62 sing N N 29 A2G O6 HO6 sing N N 30 ALA N CA sing N N 31 ALA N H sing N N 32 ALA N H2 sing N N 33 ALA CA C sing N N 34 ALA CA CB sing N N 35 ALA CA HA sing N N 36 ALA C O doub N N 37 ALA C OXT sing N N 38 ALA CB HB1 sing N N 39 ALA CB HB2 sing N N 40 ALA CB HB3 sing N N 41 ALA OXT HXT sing N N 42 ARG N CA sing N N 43 ARG N H sing N N 44 ARG N H2 sing N N 45 ARG CA C sing N N 46 ARG CA CB sing N N 47 ARG CA HA sing N N 48 ARG C O doub N N 49 ARG C OXT sing N N 50 ARG CB CG sing N N 51 ARG CB HB2 sing N N 52 ARG CB HB3 sing N N 53 ARG CG CD sing N N 54 ARG CG HG2 sing N N 55 ARG CG HG3 sing N N 56 ARG CD NE sing N N 57 ARG CD HD2 sing N N 58 ARG CD HD3 sing N N 59 ARG NE CZ sing N N 60 ARG NE HE sing N N 61 ARG CZ NH1 sing N N 62 ARG CZ NH2 doub N N 63 ARG NH1 HH11 sing N N 64 ARG NH1 HH12 sing N N 65 ARG NH2 HH21 sing N N 66 ARG NH2 HH22 sing N N 67 ARG OXT HXT sing N N 68 ASN N CA sing N N 69 ASN N H sing N N 70 ASN N H2 sing N N 71 ASN CA C sing N N 72 ASN CA CB sing N N 73 ASN CA HA sing N N 74 ASN C O doub N N 75 ASN C OXT sing N N 76 ASN CB CG sing N N 77 ASN CB HB2 sing N N 78 ASN CB HB3 sing N N 79 ASN CG OD1 doub N N 80 ASN CG ND2 sing N N 81 ASN ND2 HD21 sing N N 82 ASN ND2 HD22 sing N N 83 ASN OXT HXT sing N N 84 ASP N CA sing N N 85 ASP N H sing N N 86 ASP N H2 sing N N 87 ASP CA C sing N N 88 ASP CA CB sing N N 89 ASP CA HA sing N N 90 ASP C O doub N N 91 ASP C OXT sing N N 92 ASP CB CG sing N N 93 ASP CB HB2 sing N N 94 ASP CB HB3 sing N N 95 ASP CG OD1 doub N N 96 ASP CG OD2 sing N N 97 ASP OD2 HD2 sing N N 98 ASP OXT HXT sing N N 99 CYS N CA sing N N 100 CYS N H sing N N 101 CYS N H2 sing N N 102 CYS CA C sing N N 103 CYS CA CB sing N N 104 CYS CA HA sing N N 105 CYS C O doub N N 106 CYS C OXT sing N N 107 CYS CB SG sing N N 108 CYS CB HB2 sing N N 109 CYS CB HB3 sing N N 110 CYS SG HG sing N N 111 CYS OXT HXT sing N N 112 GAL C1 C2 sing N N 113 GAL C1 O1 sing N N 114 GAL C1 O5 sing N N 115 GAL C1 H1 sing N N 116 GAL C2 C3 sing N N 117 GAL C2 O2 sing N N 118 GAL C2 H2 sing N N 119 GAL C3 C4 sing N N 120 GAL C3 O3 sing N N 121 GAL C3 H3 sing N N 122 GAL C4 C5 sing N N 123 GAL C4 O4 sing N N 124 GAL C4 H4 sing N N 125 GAL C5 C6 sing N N 126 GAL C5 O5 sing N N 127 GAL C5 H5 sing N N 128 GAL C6 O6 sing N N 129 GAL C6 H61 sing N N 130 GAL C6 H62 sing N N 131 GAL O1 HO1 sing N N 132 GAL O2 HO2 sing N N 133 GAL O3 HO3 sing N N 134 GAL O4 HO4 sing N N 135 GAL O6 HO6 sing N N 136 GLN N CA sing N N 137 GLN N H sing N N 138 GLN N H2 sing N N 139 GLN CA C sing N N 140 GLN CA CB sing N N 141 GLN CA HA sing N N 142 GLN C O doub N N 143 GLN C OXT sing N N 144 GLN CB CG sing N N 145 GLN CB HB2 sing N N 146 GLN CB HB3 sing N N 147 GLN CG CD sing N N 148 GLN CG HG2 sing N N 149 GLN CG HG3 sing N N 150 GLN CD OE1 doub N N 151 GLN CD NE2 sing N N 152 GLN NE2 HE21 sing N N 153 GLN NE2 HE22 sing N N 154 GLN OXT HXT sing N N 155 GLU N CA sing N N 156 GLU N H sing N N 157 GLU N H2 sing N N 158 GLU CA C sing N N 159 GLU CA CB sing N N 160 GLU CA HA sing N N 161 GLU C O doub N N 162 GLU C OXT sing N N 163 GLU CB CG sing N N 164 GLU CB HB2 sing N N 165 GLU CB HB3 sing N N 166 GLU CG CD sing N N 167 GLU CG HG2 sing N N 168 GLU CG HG3 sing N N 169 GLU CD OE1 doub N N 170 GLU CD OE2 sing N N 171 GLU OE2 HE2 sing N N 172 GLU OXT HXT sing N N 173 GLY N CA sing N N 174 GLY N H sing N N 175 GLY N H2 sing N N 176 GLY CA C sing N N 177 GLY CA HA2 sing N N 178 GLY CA HA3 sing N N 179 GLY C O doub N N 180 GLY C OXT sing N N 181 GLY OXT HXT sing N N 182 HIS N CA sing N N 183 HIS N H sing N N 184 HIS N H2 sing N N 185 HIS CA C sing N N 186 HIS CA CB sing N N 187 HIS CA HA sing N N 188 HIS C O doub N N 189 HIS C OXT sing N N 190 HIS CB CG sing N N 191 HIS CB HB2 sing N N 192 HIS CB HB3 sing N N 193 HIS CG ND1 sing Y N 194 HIS CG CD2 doub Y N 195 HIS ND1 CE1 doub Y N 196 HIS ND1 HD1 sing N N 197 HIS CD2 NE2 sing Y N 198 HIS CD2 HD2 sing N N 199 HIS CE1 NE2 sing Y N 200 HIS CE1 HE1 sing N N 201 HIS NE2 HE2 sing N N 202 HIS OXT HXT sing N N 203 HOH O H1 sing N N 204 HOH O H2 sing N N 205 ILE N CA sing N N 206 ILE N H sing N N 207 ILE N H2 sing N N 208 ILE CA C sing N N 209 ILE CA CB sing N N 210 ILE CA HA sing N N 211 ILE C O doub N N 212 ILE C OXT sing N N 213 ILE CB CG1 sing N N 214 ILE CB CG2 sing N N 215 ILE CB HB sing N N 216 ILE CG1 CD1 sing N N 217 ILE CG1 HG12 sing N N 218 ILE CG1 HG13 sing N N 219 ILE CG2 HG21 sing N N 220 ILE CG2 HG22 sing N N 221 ILE CG2 HG23 sing N N 222 ILE CD1 HD11 sing N N 223 ILE CD1 HD12 sing N N 224 ILE CD1 HD13 sing N N 225 ILE OXT HXT sing N N 226 LEU N CA sing N N 227 LEU N H sing N N 228 LEU N H2 sing N N 229 LEU CA C sing N N 230 LEU CA CB sing N N 231 LEU CA HA sing N N 232 LEU C O doub N N 233 LEU C OXT sing N N 234 LEU CB CG sing N N 235 LEU CB HB2 sing N N 236 LEU CB HB3 sing N N 237 LEU CG CD1 sing N N 238 LEU CG CD2 sing N N 239 LEU CG HG sing N N 240 LEU CD1 HD11 sing N N 241 LEU CD1 HD12 sing N N 242 LEU CD1 HD13 sing N N 243 LEU CD2 HD21 sing N N 244 LEU CD2 HD22 sing N N 245 LEU CD2 HD23 sing N N 246 LEU OXT HXT sing N N 247 LYS N CA sing N N 248 LYS N H sing N N 249 LYS N H2 sing N N 250 LYS CA C sing N N 251 LYS CA CB sing N N 252 LYS CA HA sing N N 253 LYS C O doub N N 254 LYS C OXT sing N N 255 LYS CB CG sing N N 256 LYS CB HB2 sing N N 257 LYS CB HB3 sing N N 258 LYS CG CD sing N N 259 LYS CG HG2 sing N N 260 LYS CG HG3 sing N N 261 LYS CD CE sing N N 262 LYS CD HD2 sing N N 263 LYS CD HD3 sing N N 264 LYS CE NZ sing N N 265 LYS CE HE2 sing N N 266 LYS CE HE3 sing N N 267 LYS NZ HZ1 sing N N 268 LYS NZ HZ2 sing N N 269 LYS NZ HZ3 sing N N 270 LYS OXT HXT sing N N 271 MET N CA sing N N 272 MET N H sing N N 273 MET N H2 sing N N 274 MET CA C sing N N 275 MET CA CB sing N N 276 MET CA HA sing N N 277 MET C O doub N N 278 MET C OXT sing N N 279 MET CB CG sing N N 280 MET CB HB2 sing N N 281 MET CB HB3 sing N N 282 MET CG SD sing N N 283 MET CG HG2 sing N N 284 MET CG HG3 sing N N 285 MET SD CE sing N N 286 MET CE HE1 sing N N 287 MET CE HE2 sing N N 288 MET CE HE3 sing N N 289 MET OXT HXT sing N N 290 PHE N CA sing N N 291 PHE N H sing N N 292 PHE N H2 sing N N 293 PHE CA C sing N N 294 PHE CA CB sing N N 295 PHE CA HA sing N N 296 PHE C O doub N N 297 PHE C OXT sing N N 298 PHE CB CG sing N N 299 PHE CB HB2 sing N N 300 PHE CB HB3 sing N N 301 PHE CG CD1 doub Y N 302 PHE CG CD2 sing Y N 303 PHE CD1 CE1 sing Y N 304 PHE CD1 HD1 sing N N 305 PHE CD2 CE2 doub Y N 306 PHE CD2 HD2 sing N N 307 PHE CE1 CZ doub Y N 308 PHE CE1 HE1 sing N N 309 PHE CE2 CZ sing Y N 310 PHE CE2 HE2 sing N N 311 PHE CZ HZ sing N N 312 PHE OXT HXT sing N N 313 PRO N CA sing N N 314 PRO N CD sing N N 315 PRO N H sing N N 316 PRO CA C sing N N 317 PRO CA CB sing N N 318 PRO CA HA sing N N 319 PRO C O doub N N 320 PRO C OXT sing N N 321 PRO CB CG sing N N 322 PRO CB HB2 sing N N 323 PRO CB HB3 sing N N 324 PRO CG CD sing N N 325 PRO CG HG2 sing N N 326 PRO CG HG3 sing N N 327 PRO CD HD2 sing N N 328 PRO CD HD3 sing N N 329 PRO OXT HXT sing N N 330 SER N CA sing N N 331 SER N H sing N N 332 SER N H2 sing N N 333 SER CA C sing N N 334 SER CA CB sing N N 335 SER CA HA sing N N 336 SER C O doub N N 337 SER C OXT sing N N 338 SER CB OG sing N N 339 SER CB HB2 sing N N 340 SER CB HB3 sing N N 341 SER OG HG sing N N 342 SER OXT HXT sing N N 343 THR N CA sing N N 344 THR N H sing N N 345 THR N H2 sing N N 346 THR CA C sing N N 347 THR CA CB sing N N 348 THR CA HA sing N N 349 THR C O doub N N 350 THR C OXT sing N N 351 THR CB OG1 sing N N 352 THR CB CG2 sing N N 353 THR CB HB sing N N 354 THR OG1 HG1 sing N N 355 THR CG2 HG21 sing N N 356 THR CG2 HG22 sing N N 357 THR CG2 HG23 sing N N 358 THR OXT HXT sing N N 359 TRP N CA sing N N 360 TRP N H sing N N 361 TRP N H2 sing N N 362 TRP CA C sing N N 363 TRP CA CB sing N N 364 TRP CA HA sing N N 365 TRP C O doub N N 366 TRP C OXT sing N N 367 TRP CB CG sing N N 368 TRP CB HB2 sing N N 369 TRP CB HB3 sing N N 370 TRP CG CD1 doub Y N 371 TRP CG CD2 sing Y N 372 TRP CD1 NE1 sing Y N 373 TRP CD1 HD1 sing N N 374 TRP CD2 CE2 doub Y N 375 TRP CD2 CE3 sing Y N 376 TRP NE1 CE2 sing Y N 377 TRP NE1 HE1 sing N N 378 TRP CE2 CZ2 sing Y N 379 TRP CE3 CZ3 doub Y N 380 TRP CE3 HE3 sing N N 381 TRP CZ2 CH2 doub Y N 382 TRP CZ2 HZ2 sing N N 383 TRP CZ3 CH2 sing Y N 384 TRP CZ3 HZ3 sing N N 385 TRP CH2 HH2 sing N N 386 TRP OXT HXT sing N N 387 TYR N CA sing N N 388 TYR N H sing N N 389 TYR N H2 sing N N 390 TYR CA C sing N N 391 TYR CA CB sing N N 392 TYR CA HA sing N N 393 TYR C O doub N N 394 TYR C OXT sing N N 395 TYR CB CG sing N N 396 TYR CB HB2 sing N N 397 TYR CB HB3 sing N N 398 TYR CG CD1 doub Y N 399 TYR CG CD2 sing Y N 400 TYR CD1 CE1 sing Y N 401 TYR CD1 HD1 sing N N 402 TYR CD2 CE2 doub Y N 403 TYR CD2 HD2 sing N N 404 TYR CE1 CZ doub Y N 405 TYR CE1 HE1 sing N N 406 TYR CE2 CZ sing Y N 407 TYR CE2 HE2 sing N N 408 TYR CZ OH sing N N 409 TYR OH HH sing N N 410 TYR OXT HXT sing N N 411 VAL N CA sing N N 412 VAL N H sing N N 413 VAL N H2 sing N N 414 VAL CA C sing N N 415 VAL CA CB sing N N 416 VAL CA HA sing N N 417 VAL C O doub N N 418 VAL C OXT sing N N 419 VAL CB CG1 sing N N 420 VAL CB CG2 sing N N 421 VAL CB HB sing N N 422 VAL CG1 HG11 sing N N 423 VAL CG1 HG12 sing N N 424 VAL CG1 HG13 sing N N 425 VAL CG2 HG21 sing N N 426 VAL CG2 HG22 sing N N 427 VAL CG2 HG23 sing N N 428 VAL OXT HXT sing N N 429 # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 3 A2G 1 n 3 GAL 2 n # loop_ _pdbx_entity_instance_feature.ordinal _pdbx_entity_instance_feature.comp_id _pdbx_entity_instance_feature.asym_id _pdbx_entity_instance_feature.seq_num _pdbx_entity_instance_feature.auth_comp_id _pdbx_entity_instance_feature.auth_asym_id _pdbx_entity_instance_feature.auth_seq_num _pdbx_entity_instance_feature.feature_type _pdbx_entity_instance_feature.details 1 A2G ? ? A2G ? ? 'SUBJECT OF INVESTIGATION' ? 2 GAL ? ? GAL ? ? 'SUBJECT OF INVESTIGATION' ? # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 6Z2D _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 6Z2P _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.007879 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.007879 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.015258 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C CA N O S # loop_