HEADER CHAPERONE 27-MAY-20 6Z5N TITLE DNAJB1 JD-GF COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNAJ HOMOLOG SUBFAMILY B MEMBER 1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: DNAJ PROTEIN HOMOLOG 1,HEAT SHOCK 40 KDA PROTEIN 1,HEAT COMPND 5 SHOCK PROTEIN 40,HUMAN DNAJ PROTEIN 1,HDJ-1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: DNAJB1, DNAJ1, HDJ1, HSPF1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS MOLECULAR CHAPERONE, J-DOMAIN PROTEIN, HSP40, DNAJ, CHAPERONE EXPDTA SOLUTION NMR NUMMDL 10 AUTHOR M.AVRAHAM-ABAYEV,N.LONDON,R.ROSENZWEIG REVDAT 4 14-JUN-23 6Z5N 1 REMARK REVDAT 3 02-DEC-20 6Z5N 1 JRNL REVDAT 2 25-NOV-20 6Z5N 1 JRNL REVDAT 1 18-NOV-20 6Z5N 0 JRNL AUTH O.FAUST,M.ABAYEV-AVRAHAM,A.S.WENTINK,M.MAURER,N.B.NILLEGODA, JRNL AUTH 2 N.LONDON,B.BUKAU,R.ROSENZWEIG JRNL TITL HSP40 PROTEINS USE CLASS-SPECIFIC REGULATION TO DRIVE HSP70 JRNL TITL 2 FUNCTIONAL DIVERSITY. JRNL REF NATURE V. 587 489 2020 JRNL REFN ESSN 1476-4687 JRNL PMID 33177718 JRNL DOI 10.1038/S41586-020-2906-4 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CS-ROSETTA REMARK 3 AUTHORS : SHEN, VERNON, BAKER AND BAX REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6Z5N COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 27-MAY-20. REMARK 100 THE DEPOSITION ID IS D_1292108688. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298; 298 REMARK 210 PH : 7.0; 7.0 REMARK 210 IONIC STRENGTH : 50; 150 REMARK 210 PRESSURE : 1 PA; 1 PA REMARK 210 SAMPLE CONTENTS : 4.0 MM [U-13C; U-15N] DNAJB1 JD REMARK 210 -GF, 2.0 MM [U-15N] DNAJB1 JD-GF, REMARK 210 90% H2O/10% D2O; 2.5 MM [U-13C; REMARK 210 U-15N] DNAJB1 JD-GF, 100% D2O; REMARK 210 0.4 MM [U-15N] DNAJB1 JD-GF, 90% REMARK 210 H2O/10% D2O; 4.0 MM [U-13C; U- REMARK 210 15N] DNAJB1 JD-GF, 2.0 MM [U-15N] REMARK 210 DNAJB1 JD-GF, 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D HNCACB; 3D CBCA(CO)NH; 3D REMARK 210 HN(CO)CA; 3D 1H-15N NOESY; 3D REMARK 210 HCCH-TOCSY; 3D CCH-TOCSY; IPAP; REMARK 210 3D 13C-EDITED NOESY; (HB) REMARK 210 CB(CGCDCE)HE REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 800 MHZ; 1000 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE NEO; AVANCE III REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CS-ROSETTA, CCPNMR ANALYSIS REMARK 210 METHOD USED : NA REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 2500 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 10 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 0 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 6960 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HH TYR A 24 O PRO A 98 1.57 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 LYS A 3 42.48 -92.56 REMARK 500 1 ASP A 53 -56.47 -27.52 REMARK 500 1 SER A 78 41.42 -100.55 REMARK 500 1 ASN A 86 -84.88 68.08 REMARK 500 1 PRO A 98 45.64 -78.14 REMARK 500 2 LYS A 3 44.57 -162.86 REMARK 500 2 ALA A 49 -77.78 -45.62 REMARK 500 2 THR A 88 99.37 -48.78 REMARK 500 2 SER A 91 -156.48 -56.08 REMARK 500 2 THR A 93 79.31 -68.81 REMARK 500 3 SER A 16 162.24 -48.90 REMARK 500 3 SER A 91 -143.37 -111.36 REMARK 500 4 SER A 16 163.82 -48.81 REMARK 500 4 TYR A 67 -65.84 -125.50 REMARK 500 4 ALA A 85 49.75 -149.69 REMARK 500 4 PRO A 98 49.06 -77.79 REMARK 500 5 ARG A 25 -62.08 -26.47 REMARK 500 5 ILE A 63 -72.50 -65.18 REMARK 500 5 ASN A 86 -85.16 68.62 REMARK 500 5 PRO A 98 49.10 -75.66 REMARK 500 6 ASP A 4 -159.83 -73.16 REMARK 500 6 SER A 91 -150.00 -136.89 REMARK 500 6 THR A 93 73.35 -68.07 REMARK 500 6 HIS A 95 -51.84 -131.48 REMARK 500 7 ASP A 4 -161.66 -78.65 REMARK 500 7 PRO A 77 85.03 -68.13 REMARK 500 7 PHE A 90 21.95 -154.17 REMARK 500 7 SER A 91 -159.75 -162.40 REMARK 500 7 THR A 93 80.16 -62.41 REMARK 500 7 PHE A 94 55.24 -90.35 REMARK 500 8 TYR A 67 -56.31 -127.22 REMARK 500 8 SER A 78 43.27 -103.51 REMARK 500 8 ASN A 86 -88.09 65.97 REMARK 500 8 PHE A 90 108.04 -170.11 REMARK 500 8 PRO A 98 48.15 -75.62 REMARK 500 9 SER A 78 43.61 -105.01 REMARK 500 9 ASN A 86 -84.59 68.74 REMARK 500 9 PHE A 90 119.76 -168.11 REMARK 500 9 PRO A 98 48.65 -76.34 REMARK 500 10 ALA A 49 -76.91 -41.06 REMARK 500 10 ASP A 53 -55.47 -23.68 REMARK 500 10 ARG A 61 -47.14 -26.57 REMARK 500 10 PHE A 64 -70.03 -49.44 REMARK 500 10 ASN A 86 -85.35 67.96 REMARK 500 10 THR A 93 77.47 -62.42 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 50167 RELATED DB: BMRB DBREF 6Z5N A 1 110 UNP P25685 DNJB1_HUMAN 1 110 SEQRES 1 A 110 MET GLY LYS ASP TYR TYR GLN THR LEU GLY LEU ALA ARG SEQRES 2 A 110 GLY ALA SER ASP GLU GLU ILE LYS ARG ALA TYR ARG ARG SEQRES 3 A 110 GLN ALA LEU ARG TYR HIS PRO ASP LYS ASN LYS GLU PRO SEQRES 4 A 110 GLY ALA GLU GLU LYS PHE LYS GLU ILE ALA GLU ALA TYR SEQRES 5 A 110 ASP VAL LEU SER ASP PRO ARG LYS ARG GLU ILE PHE ASP SEQRES 6 A 110 ARG TYR GLY GLU GLU GLY LEU LYS GLY SER GLY PRO SER SEQRES 7 A 110 GLY GLY SER GLY GLY GLY ALA ASN GLY THR SER PHE SER SEQRES 8 A 110 TYR THR PHE HIS GLY ASP PRO HIS ALA MET PHE ALA GLU SEQRES 9 A 110 PHE PHE GLY GLY ARG ASN HELIX 1 AA1 ASP A 4 GLY A 10 1 7 HELIX 2 AA2 SER A 16 TYR A 31 1 16 HELIX 3 AA3 GLY A 40 ASP A 57 1 18 HELIX 4 AA4 ASP A 57 TYR A 67 1 11 HELIX 5 AA5 GLU A 69 GLY A 74 1 6 HELIX 6 AA6 PRO A 98 PHE A 106 1 9 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1