HEADER VIRAL PROTEIN 27-MAY-20 6Z5T TITLE SARS-COV-2 MACRODOMAIN IN COMPLEX WITH ADP-RIBOSE COMPND MOL_ID: 1; COMPND 2 MOLECULE: REPLICASE POLYPROTEIN 1AB; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: PP1AB,ORF1AB POLYPROTEIN; COMPND 5 EC: 3.4.19.12,3.4.22.-,3.4.22.69,2.7.7.48,3.6.4.12,3.6.4.13,3.1.13.-, COMPND 6 3.1.-.-,2.1.1.-; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS SOURCE 3 2; SOURCE 4 ORGANISM_COMMON: 2019-NCOV; SOURCE 5 ORGANISM_TAXID: 2697049; SOURCE 6 GENE: REP, 1A-1B; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS VIRAL MACRODOMAIN, ADP-RIBOSE BINDING MODULE, ADP-RIBOSYLHYDROLASE, KEYWDS 2 ADP-RIBOSYLATION, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR V.ZORZINI,J.RACK,I.AHEL REVDAT 2 24-JAN-24 6Z5T 1 REMARK REVDAT 1 02-DEC-20 6Z5T 0 JRNL AUTH J.G.M.RACK,V.ZORZINI,Z.ZHU,M.SCHULLER,D.AHEL,I.AHEL JRNL TITL VIRAL MACRODOMAINS: A STRUCTURAL AND EVOLUTIONARY ASSESSMENT JRNL TITL 2 OF THE PHARMACOLOGICAL POTENTIAL. JRNL REF OPEN BIOLOGY V. 10 00237 2020 JRNL REFN ESSN 2046-2441 JRNL PMID 33202171 JRNL DOI 10.1098/RSOB.200237 REMARK 2 REMARK 2 RESOLUTION. 1.57 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.13_2998 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.57 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 55.98 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 3 NUMBER OF REFLECTIONS : 51838 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.212 REMARK 3 R VALUE (WORKING SET) : 0.209 REMARK 3 FREE R VALUE : 0.249 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 2597 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 55.9750 - 4.1916 0.99 2800 142 0.1457 0.1778 REMARK 3 2 4.1916 - 3.3271 1.00 2658 167 0.1266 0.1522 REMARK 3 3 3.3271 - 2.9066 1.00 2609 179 0.1754 0.2394 REMARK 3 4 2.9066 - 2.6408 1.00 2645 137 0.2015 0.2638 REMARK 3 5 2.6408 - 2.4515 1.00 2628 123 0.2093 0.2816 REMARK 3 6 2.4515 - 2.3070 1.00 2626 126 0.1993 0.2422 REMARK 3 7 2.3070 - 2.1914 1.00 2591 133 0.1931 0.2615 REMARK 3 8 2.1914 - 2.0960 0.99 2612 125 0.1998 0.2329 REMARK 3 9 2.0960 - 2.0154 1.00 2587 131 0.2141 0.2936 REMARK 3 10 2.0154 - 1.9458 1.00 2571 145 0.2432 0.3162 REMARK 3 11 1.9458 - 1.8850 1.00 2582 154 0.3023 0.3492 REMARK 3 12 1.8850 - 1.8311 1.00 2587 135 0.3091 0.3496 REMARK 3 13 1.8311 - 1.7829 1.00 2572 134 0.3151 0.3713 REMARK 3 14 1.7829 - 1.7394 1.00 2620 123 0.3530 0.3795 REMARK 3 15 1.7394 - 1.6998 1.00 2571 136 0.3639 0.3387 REMARK 3 16 1.6998 - 1.6636 0.99 2559 122 0.3891 0.4072 REMARK 3 17 1.6636 - 1.6304 0.99 2549 115 0.4245 0.4510 REMARK 3 18 1.6304 - 1.5996 0.98 2539 141 0.4382 0.4191 REMARK 3 19 1.5996 - 1.5710 0.90 2335 129 0.4658 0.4586 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.310 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 33.780 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 21.56 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.88 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN A AND (RESID 207 THROUGH 237 OR REMARK 3 RESID 239 OR RESID 241 THROUGH 265 OR REMARK 3 RESID 267 THROUGH 306 OR (RESID 307 AND REMARK 3 (NAME N OR NAME CA OR NAME C OR NAME O OR REMARK 3 NAME CB )) OR RESID 308 THROUGH 314 OR REMARK 3 (RESID 315 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB OR NAME CG )) OR REMARK 3 RESID 317 THROUGH 341 OR RESID 343 REMARK 3 THROUGH 345 OR (RESID 346 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB OR REMARK 3 NAME CG )) OR RESID 347 THROUGH 367 OR REMARK 3 (RESID 368 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB OR NAME CG )) OR REMARK 3 RESID 369 THROUGH 370 OR RESID 373 REMARK 3 THROUGH 375 OR RESID 377 THROUGH 378 OR REMARK 3 RESID 401)) REMARK 3 SELECTION : (CHAIN B AND (RESID 207 THROUGH 235 OR REMARK 3 (RESID 236 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB )) OR RESID 237 OR REMARK 3 RESID 239 OR RESID 241 THROUGH 265 OR REMARK 3 RESID 267 THROUGH 315 OR RESID 317 REMARK 3 THROUGH 341 OR RESID 343 THROUGH 370 OR REMARK 3 RESID 373 THROUGH 375 OR RESID 377 REMARK 3 THROUGH 378 OR RESID 401)) REMARK 3 ATOM PAIRS NUMBER : 1434 REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6Z5T COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 27-MAY-20. REMARK 100 THE DEPOSITION ID IS D_1292108973. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-APR-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.976230 REMARK 200 MONOCHROMATOR : M REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 XE 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : XIA2 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 52532 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.570 REMARK 200 RESOLUTION RANGE LOW (A) : 82.330 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 13.00 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 4.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.57 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.60 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 12.30 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2ACF REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.45 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.43 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.775 M DL-MALIC ACID PH 7.0 10 MM REMARK 280 TCEP, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 29.39100 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 41.16300 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 38.16700 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 41.16300 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 29.39100 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 38.16700 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 204 REMARK 465 PRO A 205 REMARK 465 GLY B 204 REMARK 465 PRO B 205 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 206 CG CD OE1 OE2 REMARK 470 LYS A 235 CG CD CE NZ REMARK 470 LYS A 259 CE NZ REMARK 470 LYS A 280 CD CE NZ REMARK 470 LYS A 306 CE NZ REMARK 470 LYS A 367 NZ REMARK 470 LYS A 379 CG CD CE NZ REMARK 470 GLU B 206 CG CD OE1 OE2 REMARK 470 LYS B 235 CE NZ REMARK 470 LYS B 259 CE NZ REMARK 470 LYS B 280 CD CE NZ REMARK 470 LYS B 306 CG CD CE NZ REMARK 470 LYS B 314 CD CE NZ REMARK 470 ARG B 345 CD NE CZ NH1 NH2 REMARK 470 LYS B 367 CD CE NZ REMARK 470 LYS B 379 CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 290 -130.34 55.26 REMARK 500 SER A 332 -1.95 67.48 REMARK 500 HIS B 290 -130.11 54.87 REMARK 500 SER B 332 -0.67 68.55 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 686 DISTANCE = 5.92 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 402 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 525 O REMARK 620 2 HOH A 526 O 87.9 REMARK 620 3 HOH A 559 O 144.4 64.3 REMARK 620 4 HOH A 580 O 115.0 115.8 97.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 402 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B 572 O REMARK 620 2 HOH B 592 O 139.3 REMARK 620 3 HOH B 639 O 112.8 93.6 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue APR A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue APR B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA B 402 DBREF 6Z5T A 206 379 UNP P0DTD1 R1AB_SARS2 1024 1197 DBREF 6Z5T B 206 379 UNP P0DTD1 R1AB_SARS2 1024 1197 SEQADV 6Z5T GLY A 204 UNP P0DTD1 EXPRESSION TAG SEQADV 6Z5T PRO A 205 UNP P0DTD1 EXPRESSION TAG SEQADV 6Z5T GLY B 204 UNP P0DTD1 EXPRESSION TAG SEQADV 6Z5T PRO B 205 UNP P0DTD1 EXPRESSION TAG SEQRES 1 A 176 GLY PRO GLU VAL ASN SER PHE SER GLY TYR LEU LYS LEU SEQRES 2 A 176 THR ASP ASN VAL TYR ILE LYS ASN ALA ASP ILE VAL GLU SEQRES 3 A 176 GLU ALA LYS LYS VAL LYS PRO THR VAL VAL VAL ASN ALA SEQRES 4 A 176 ALA ASN VAL TYR LEU LYS HIS GLY GLY GLY VAL ALA GLY SEQRES 5 A 176 ALA LEU ASN LYS ALA THR ASN ASN ALA MET GLN VAL GLU SEQRES 6 A 176 SER ASP ASP TYR ILE ALA THR ASN GLY PRO LEU LYS VAL SEQRES 7 A 176 GLY GLY SER CYS VAL LEU SER GLY HIS ASN LEU ALA LYS SEQRES 8 A 176 HIS CYS LEU HIS VAL VAL GLY PRO ASN VAL ASN LYS GLY SEQRES 9 A 176 GLU ASP ILE GLN LEU LEU LYS SER ALA TYR GLU ASN PHE SEQRES 10 A 176 ASN GLN HIS GLU VAL LEU LEU ALA PRO LEU LEU SER ALA SEQRES 11 A 176 GLY ILE PHE GLY ALA ASP PRO ILE HIS SER LEU ARG VAL SEQRES 12 A 176 CYS VAL ASP THR VAL ARG THR ASN VAL TYR LEU ALA VAL SEQRES 13 A 176 PHE ASP LYS ASN LEU TYR ASP LYS LEU VAL SER SER PHE SEQRES 14 A 176 LEU GLU MET LYS SER GLU LYS SEQRES 1 B 176 GLY PRO GLU VAL ASN SER PHE SER GLY TYR LEU LYS LEU SEQRES 2 B 176 THR ASP ASN VAL TYR ILE LYS ASN ALA ASP ILE VAL GLU SEQRES 3 B 176 GLU ALA LYS LYS VAL LYS PRO THR VAL VAL VAL ASN ALA SEQRES 4 B 176 ALA ASN VAL TYR LEU LYS HIS GLY GLY GLY VAL ALA GLY SEQRES 5 B 176 ALA LEU ASN LYS ALA THR ASN ASN ALA MET GLN VAL GLU SEQRES 6 B 176 SER ASP ASP TYR ILE ALA THR ASN GLY PRO LEU LYS VAL SEQRES 7 B 176 GLY GLY SER CYS VAL LEU SER GLY HIS ASN LEU ALA LYS SEQRES 8 B 176 HIS CYS LEU HIS VAL VAL GLY PRO ASN VAL ASN LYS GLY SEQRES 9 B 176 GLU ASP ILE GLN LEU LEU LYS SER ALA TYR GLU ASN PHE SEQRES 10 B 176 ASN GLN HIS GLU VAL LEU LEU ALA PRO LEU LEU SER ALA SEQRES 11 B 176 GLY ILE PHE GLY ALA ASP PRO ILE HIS SER LEU ARG VAL SEQRES 12 B 176 CYS VAL ASP THR VAL ARG THR ASN VAL TYR LEU ALA VAL SEQRES 13 B 176 PHE ASP LYS ASN LEU TYR ASP LYS LEU VAL SER SER PHE SEQRES 14 B 176 LEU GLU MET LYS SER GLU LYS HET APR A 401 36 HET NA A 402 1 HET APR B 401 36 HET NA B 402 1 HETNAM APR ADENOSINE-5-DIPHOSPHORIBOSE HETNAM NA SODIUM ION FORMUL 3 APR 2(C15 H23 N5 O14 P2) FORMUL 4 NA 2(NA 1+) FORMUL 7 HOH *346(H2 O) HELIX 1 AA1 ASP A 226 LYS A 235 1 10 HELIX 2 AA2 GLY A 252 THR A 261 1 10 HELIX 3 AA3 ASN A 263 GLY A 277 1 15 HELIX 4 AA4 ASN A 303 GLY A 307 5 5 HELIX 5 AA5 GLN A 311 ASN A 319 1 9 HELIX 6 AA6 PHE A 320 HIS A 323 5 4 HELIX 7 AA7 ASP A 339 VAL A 351 1 13 HELIX 8 AA8 ASP A 361 GLU A 378 1 18 HELIX 9 AA9 ASP B 226 LYS B 235 1 10 HELIX 10 AB1 GLY B 252 THR B 261 1 10 HELIX 11 AB2 ASN B 263 GLY B 277 1 15 HELIX 12 AB3 ASN B 303 GLY B 307 5 5 HELIX 13 AB4 GLN B 311 ASN B 319 1 9 HELIX 14 AB5 PHE B 320 HIS B 323 5 4 HELIX 15 AB6 ASP B 339 VAL B 351 1 13 HELIX 16 AB7 ASP B 361 LYS B 379 1 19 SHEET 1 AA1 4 LEU A 214 LYS A 215 0 SHEET 2 AA1 4 VAL A 220 LYS A 223 -1 O ILE A 222 N LEU A 214 SHEET 3 AA1 4 ASN A 354 ALA A 358 1 O LEU A 357 N TYR A 221 SHEET 4 AA1 4 VAL A 325 ALA A 328 1 N ALA A 328 O TYR A 356 SHEET 1 AA2 3 VAL A 238 ALA A 243 0 SHEET 2 AA2 3 HIS A 295 VAL A 300 1 O VAL A 299 N ALA A 243 SHEET 3 AA2 3 SER A 284 SER A 288 -1 N LEU A 287 O CYS A 296 SHEET 1 AA3 4 LEU B 214 LYS B 215 0 SHEET 2 AA3 4 VAL B 220 LYS B 223 -1 O ILE B 222 N LEU B 214 SHEET 3 AA3 4 ASN B 354 ALA B 358 1 O VAL B 355 N TYR B 221 SHEET 4 AA3 4 VAL B 325 ALA B 328 1 N LEU B 326 O TYR B 356 SHEET 1 AA4 3 VAL B 238 ALA B 242 0 SHEET 2 AA4 3 HIS B 295 VAL B 299 1 O VAL B 299 N ASN B 241 SHEET 3 AA4 3 SER B 284 SER B 288 -1 N LEU B 287 O CYS B 296 LINK NA NA A 402 O HOH A 525 1555 1555 2.69 LINK NA NA A 402 O HOH A 526 1555 1555 2.91 LINK NA NA A 402 O HOH A 559 1555 1555 2.83 LINK NA NA A 402 O HOH A 580 1555 1555 2.93 LINK NA NA B 402 O HOH B 572 1555 1555 2.67 LINK NA NA B 402 O HOH B 592 1555 1555 3.00 LINK NA NA B 402 O HOH B 639 1555 1555 2.70 SITE 1 AC1 30 ASP A 226 ILE A 227 ALA A 242 ASN A 244 SITE 2 AC1 30 LYS A 248 HIS A 249 GLY A 250 GLY A 251 SITE 3 AC1 30 GLY A 252 VAL A 253 ALA A 254 LEU A 330 SITE 4 AC1 30 SER A 332 ALA A 333 GLY A 334 ILE A 335 SITE 5 AC1 30 PHE A 336 ALA A 358 PHE A 360 HOH A 505 SITE 6 AC1 30 HOH A 530 HOH A 537 HOH A 539 HOH A 541 SITE 7 AC1 30 HOH A 547 HOH A 548 HOH A 561 HOH A 562 SITE 8 AC1 30 HOH A 581 HOH A 610 SITE 1 AC2 5 ASN A 224 HOH A 525 HOH A 526 HOH A 559 SITE 2 AC2 5 HOH A 580 SITE 1 AC3 29 GLU A 324 ASP B 226 ILE B 227 ALA B 242 SITE 2 AC3 29 ASN B 244 LYS B 248 HIS B 249 GLY B 250 SITE 3 AC3 29 GLY B 251 GLY B 252 VAL B 253 ALA B 254 SITE 4 AC3 29 LEU B 330 SER B 332 ALA B 333 GLY B 334 SITE 5 AC3 29 ILE B 335 PHE B 336 ALA B 358 PHE B 360 SITE 6 AC3 29 HOH B 508 HOH B 515 HOH B 520 HOH B 529 SITE 7 AC3 29 HOH B 541 HOH B 567 HOH B 569 HOH B 576 SITE 8 AC3 29 HOH B 590 SITE 1 AC4 5 ASN B 224 TYR B 365 HOH B 572 HOH B 592 SITE 2 AC4 5 HOH B 639 CRYST1 58.782 76.334 82.326 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017012 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013100 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012147 0.00000