HEADER VIRUS LIKE PARTICLE 02-JUN-20 6Z8D TITLE HUMAN PICOBIRNAVIRUS CP VLP COMPND MOL_ID: 1; COMPND 2 MOLECULE: CAPSID PROTEIN PRECURSOR; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HUMAN PICOBIRNAVIRUS; SOURCE 3 ORGANISM_TAXID: 145856; SOURCE 4 GENE: SEGMENT-1, ORF2; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS HUMAN PICOBIRNAVIRUS, CRYOEM, ASSEMBLY, CAPSID PROTEIN, VIRUS LIKE KEYWDS 2 PARTICLE EXPDTA ELECTRON MICROSCOPY AUTHOR A.ORTEGA-ESTEBAN,C.P.MATA,M.J.RODRIGUEZ-ESPINOSA,D.LUQUE,N.IRIGOYEN, AUTHOR 2 J.M.RODRIGUEZ,P.J.DE PABLO,J.R.CASTON REVDAT 4 22-MAY-24 6Z8D 1 REMARK REVDAT 3 02-DEC-20 6Z8D 1 JRNL REVDAT 2 21-OCT-20 6Z8D 1 JRNL REVDAT 1 23-SEP-20 6Z8D 0 JRNL AUTH A.ORTEGA-ESTEBAN,C.P.MATA,M.J.RODRIGUEZ-ESPINOSA,D.LUQUE, JRNL AUTH 2 N.IRIGOYEN,J.M.RODRIGUEZ,P.J.DE PABLO,J.R.CASTON JRNL TITL CRYO-ELECTRON MICROSCOPY STRUCTURE, ASSEMBLY, AND MECHANICS JRNL TITL 2 SHOW MORPHOGENESIS AND EVOLUTION OF HUMAN PICOBIRNAVIRUS. JRNL REF J.VIROL. V. 94 2020 JRNL REFN ESSN 1098-5514 JRNL PMID 32938763 JRNL DOI 10.1128/JVI.01542-20 REMARK 2 REMARK 2 RESOLUTION. 2.63 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : RELION, EPU, CTFFIND, COOT, RELION, REMARK 3 RELION, RELION, RELION, PHENIX REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : 2VF1 REMARK 3 REFINEMENT SPACE : REAL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 2.630 REMARK 3 NUMBER OF PARTICLES : 102722 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 6Z8D COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 02-JUN-20. REMARK 100 THE DEPOSITION ID IS D_1292109108. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : HUMAN PICOBIRNAVIRUS REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.50 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : 2360 REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : FEI FALCON III (4K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 800.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 3500.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : 2.70 REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 156.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : 75000 REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: 60-MERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.499980 -0.806268 0.316153 0.51804 REMARK 350 BIOMT2 2 0.810215 -0.306529 0.499591 -0.12671 REMARK 350 BIOMT3 2 -0.305894 0.505937 0.806509 0.04673 REMARK 350 BIOMT1 3 -0.500302 -0.808740 0.309253 0.51481 REMARK 350 BIOMT2 3 -0.808740 0.308911 -0.500513 -0.04521 REMARK 350 BIOMT3 3 0.309253 -0.500513 -0.808609 -0.95008 REMARK 350 BIOMT1 4 -0.809017 0.309459 0.499728 0.78795 REMARK 350 BIOMT2 4 -0.311056 0.495977 -0.810710 -0.31656 REMARK 350 BIOMT3 4 -0.498735 -0.811321 -0.304995 -0.51015 REMARK 350 BIOMT1 5 -0.001900 0.999990 -0.003942 0.38077 REMARK 350 BIOMT2 5 -0.005846 -0.003953 -0.999975 -0.53517 REMARK 350 BIOMT3 5 -0.999981 -0.001877 0.005853 -0.15212 REMARK 350 BIOMT1 6 0.805640 0.308564 -0.505701 -0.14402 REMARK 350 BIOMT2 6 -0.314899 -0.499992 -0.806751 -0.39893 REMARK 350 BIOMT3 6 -0.501781 0.809195 -0.305647 -0.37077 REMARK 350 BIOMT1 7 0.497610 -0.809293 -0.312136 -0.06117 REMARK 350 BIOMT2 7 -0.811115 -0.306632 -0.498066 -0.09612 REMARK 350 BIOMT3 7 0.307371 0.501021 -0.809013 -0.86394 REMARK 350 BIOMT1 8 0.305029 0.495303 -0.813407 -0.11843 REMARK 350 BIOMT2 8 0.495303 -0.812015 -0.308716 -0.44117 REMARK 350 BIOMT3 8 -0.813407 -0.308716 -0.493014 -0.45864 REMARK 350 BIOMT1 9 0.302102 -0.502603 -0.810015 -0.20149 REMARK 350 BIOMT2 9 -0.502603 -0.805998 0.312661 0.13528 REMARK 350 BIOMT3 9 -0.810015 0.312661 -0.496104 -0.40783 REMARK 350 BIOMT1 10 -0.504448 -0.806905 -0.307306 0.23817 REMARK 350 BIOMT2 10 -0.806905 0.313879 0.500385 0.40601 REMARK 350 BIOMT3 10 -0.307306 0.500385 -0.809431 -0.68202 REMARK 350 BIOMT1 11 -0.999996 0.002933 -0.000007 0.59295 REMARK 350 BIOMT2 11 0.002933 0.999983 -0.004973 -0.00311 REMARK 350 BIOMT3 11 -0.000007 -0.004973 -0.999988 -0.90230 REMARK 350 BIOMT1 12 0.502081 -0.806843 0.311318 0.21885 REMARK 350 BIOMT2 12 0.807818 0.309018 -0.501933 -0.52491 REMARK 350 BIOMT3 12 0.308778 0.503500 0.806935 -0.13545 REMARK 350 BIOMT1 13 -0.499711 0.807742 -0.312795 0.37256 REMARK 350 BIOMT2 13 0.807742 0.304143 -0.505024 -0.52670 REMARK 350 BIOMT3 13 -0.312795 -0.505024 -0.804431 -0.76424 REMARK 350 BIOMT1 14 -0.499990 -0.811170 -0.303337 0.23827 REMARK 350 BIOMT2 14 0.808386 -0.311492 -0.499484 -0.57711 REMARK 350 BIOMT3 14 0.310679 -0.494950 0.811482 -0.21947 REMARK 350 BIOMT1 15 -0.999977 0.000017 0.006724 0.59573 REMARK 350 BIOMT2 15 0.000017 -0.999988 0.004963 -0.16904 REMARK 350 BIOMT3 15 0.006724 0.004963 0.999965 -0.00158 REMARK 350 BIOMT1 16 -0.499980 0.810215 -0.305894 0.37596 REMARK 350 BIOMT2 16 -0.806268 -0.306529 0.505937 0.35520 REMARK 350 BIOMT3 16 0.316153 0.499591 0.806509 -0.13816 REMARK 350 BIOMT1 17 0.309023 0.499759 -0.809163 -0.11732 REMARK 350 BIOMT2 17 -0.496209 0.810548 0.311109 0.27112 REMARK 350 BIOMT3 17 0.811345 0.305374 0.498463 -0.44046 REMARK 350 BIOMT1 18 0.309017 -0.502312 -0.807583 -0.20241 REMARK 350 BIOMT2 18 0.501702 0.807480 -0.310275 -0.30508 REMARK 350 BIOMT3 18 0.807963 -0.309286 0.501536 -0.49070 REMARK 350 BIOMT1 19 -0.004824 0.000883 -0.999988 -0.15308 REMARK 350 BIOMT2 19 -0.999981 0.003960 0.004827 0.21323 REMARK 350 BIOMT3 19 0.003964 0.999992 0.000864 -0.36609 REMARK 350 BIOMT1 20 -0.310483 -0.499329 -0.808870 -0.01915 REMARK 350 BIOMT2 20 -0.497382 0.810482 -0.309405 -0.00835 REMARK 350 BIOMT3 20 0.810069 0.306252 -0.499998 -0.89025 REMARK 350 BIOMT1 21 -0.809017 -0.311056 -0.498735 0.28457 REMARK 350 BIOMT2 21 0.309459 0.495977 -0.811321 -0.50073 REMARK 350 BIOMT3 21 0.499728 -0.810710 -0.304995 -0.80599 REMARK 350 BIOMT1 22 -0.811467 0.305514 -0.498179 0.33834 REMARK 350 BIOMT2 22 0.305514 -0.504919 -0.807291 -0.58345 REMARK 350 BIOMT3 22 -0.498179 -0.807291 0.316386 -0.22977 REMARK 350 BIOMT1 23 -0.303569 -0.497681 0.812502 0.71009 REMARK 350 BIOMT2 23 0.500235 -0.809014 -0.308645 -0.44234 REMARK 350 BIOMT3 23 0.810932 0.312746 0.494549 -0.44147 REMARK 350 BIOMT1 24 -0.314449 0.498303 -0.807970 0.06786 REMARK 350 BIOMT2 24 -0.503763 -0.809002 -0.302883 -0.14220 REMARK 350 BIOMT3 24 -0.804577 0.311785 0.505417 0.04211 REMARK 350 BIOMT1 25 0.812364 0.305606 0.496659 0.30574 REMARK 350 BIOMT2 25 -0.306988 -0.500000 0.809789 0.32769 REMARK 350 BIOMT3 25 0.495806 -0.810312 -0.312364 -0.80812 REMARK 350 BIOMT1 26 0.808104 -0.310944 0.500281 0.25584 REMARK 350 BIOMT2 26 -0.307997 0.500911 0.808842 0.41328 REMARK 350 BIOMT3 26 -0.502101 -0.807714 0.309019 -0.23196 REMARK 350 BIOMT1 27 0.309023 -0.496209 0.811345 0.52815 REMARK 350 BIOMT2 27 0.499759 0.810548 0.305374 -0.02662 REMARK 350 BIOMT3 27 -0.809163 0.311109 0.498463 0.04028 REMARK 350 BIOMT1 28 0.004834 0.005841 0.999971 0.74635 REMARK 350 BIOMT2 28 0.999988 0.001003 -0.004840 -0.38408 REMARK 350 BIOMT3 28 -0.001031 0.999982 -0.005836 -0.36763 REMARK 350 BIOMT1 29 0.315915 0.501390 0.805485 0.60889 REMARK 350 BIOMT2 29 0.501390 -0.808960 0.306906 -0.16510 REMARK 350 BIOMT3 29 0.805485 0.306906 -0.506955 -0.89197 REMARK 350 BIOMT1 30 -0.307550 0.504681 0.806666 0.79447 REMARK 350 BIOMT2 30 0.498582 0.807531 -0.315133 -0.30634 REMARK 350 BIOMT3 30 -0.810450 0.305270 -0.499981 -0.41008 REMARK 350 BIOMT1 31 0.502357 0.810256 0.301865 0.35299 REMARK 350 BIOMT2 31 0.805361 -0.311405 -0.504401 -0.57843 REMARK 350 BIOMT3 31 -0.314692 0.496499 -0.808986 -0.67997 REMARK 350 BIOMT1 32 0.999973 -0.002950 -0.006717 -0.00327 REMARK 350 BIOMT2 32 -0.002950 -0.999996 0.000010 -0.17039 REMARK 350 BIOMT3 32 -0.006717 0.000010 -0.999977 -0.89988 REMARK 350 BIOMT1 33 0.497610 -0.811115 0.307371 0.21803 REMARK 350 BIOMT2 33 -0.809293 -0.306632 0.501021 0.35387 REMARK 350 BIOMT3 33 -0.312136 -0.498066 -0.809013 -0.76591 REMARK 350 BIOMT1 34 -0.303569 0.500235 0.810932 0.79483 REMARK 350 BIOMT2 34 -0.497681 -0.809014 0.312746 0.13360 REMARK 350 BIOMT3 34 0.812502 -0.308645 0.494549 -0.49514 REMARK 350 BIOMT1 35 -0.310483 -0.497382 0.810069 0.71106 REMARK 350 BIOMT2 35 -0.499329 0.810482 0.306252 0.26985 REMARK 350 BIOMT3 35 -0.808870 -0.309405 -0.499998 -0.46320 REMARK 350 BIOMT1 36 -0.499990 0.808386 0.310679 0.65385 REMARK 350 BIOMT2 36 -0.811170 -0.311492 -0.494950 -0.09511 REMARK 350 BIOMT3 36 -0.303337 -0.499484 0.811482 -0.03789 REMARK 350 BIOMT1 37 0.497925 0.809646 -0.310714 0.07801 REMARK 350 BIOMT2 37 -0.811732 0.309023 -0.495577 -0.04209 REMARK 350 BIOMT3 37 -0.305224 0.498977 0.811086 0.04799 REMARK 350 BIOMT1 38 0.808104 -0.307997 -0.502101 -0.19592 REMARK 350 BIOMT2 38 -0.310944 0.500911 -0.807714 -0.31482 REMARK 350 BIOMT3 38 0.500281 0.808842 0.309019 -0.39059 REMARK 350 BIOMT1 39 0.001890 -0.999998 0.001008 0.21061 REMARK 350 BIOMT2 39 -0.000878 -0.001010 -0.999999 -0.53640 REMARK 350 BIOMT3 39 0.999998 0.001889 -0.000880 -0.74753 REMARK 350 BIOMT1 40 -0.806556 -0.310035 0.503334 0.73580 REMARK 350 BIOMT2 40 -0.310035 -0.503103 -0.806701 -0.40061 REMARK 350 BIOMT3 40 0.503334 -0.806701 0.309659 -0.52955 REMARK 350 BIOMT1 41 0.812364 -0.306988 0.495806 0.25290 REMARK 350 BIOMT2 41 0.305606 -0.500000 -0.810312 -0.58442 REMARK 350 BIOMT3 41 0.496659 0.809789 -0.312364 -0.66964 REMARK 350 BIOMT1 42 0.312975 -0.500677 0.807075 0.52467 REMARK 350 BIOMT2 42 -0.500677 -0.809077 -0.307762 -0.14533 REMARK 350 BIOMT3 42 0.807075 -0.307762 -0.503898 -0.94370 REMARK 350 BIOMT1 43 0.001890 -0.000878 0.999998 0.74665 REMARK 350 BIOMT2 43 -0.999998 -0.001010 0.001889 0.21148 REMARK 350 BIOMT3 43 0.001008 -0.999999 -0.000880 -0.53727 REMARK 350 BIOMT1 44 0.309017 0.501702 0.807963 0.61208 REMARK 350 BIOMT2 44 -0.502312 0.807480 -0.309286 -0.00709 REMARK 350 BIOMT3 44 -0.807583 -0.310275 0.501536 -0.01202 REMARK 350 BIOMT1 45 0.502081 0.807818 0.308778 0.35598 REMARK 350 BIOMT2 45 -0.806843 0.309018 0.503500 0.40699 REMARK 350 BIOMT3 45 0.311318 -0.501933 0.806935 -0.22230 REMARK 350 BIOMT1 46 0.809917 0.312516 0.496355 0.30692 REMARK 350 BIOMT2 46 0.304595 0.499088 -0.811254 -0.49899 REMARK 350 BIOMT3 46 -0.501254 0.808236 0.309029 -0.09383 REMARK 350 BIOMT1 47 -0.307550 0.498582 -0.810450 0.06473 REMARK 350 BIOMT2 47 0.504681 0.807531 0.305270 -0.02839 REMARK 350 BIOMT3 47 0.806666 -0.315133 -0.499981 -0.94244 REMARK 350 BIOMT1 48 -0.001900 -0.005846 -0.999981 -0.15452 REMARK 350 BIOMT2 48 0.999990 -0.003953 -0.001877 -0.38317 REMARK 350 BIOMT3 48 -0.003942 -0.999975 0.005853 -0.53277 REMARK 350 BIOMT1 49 -0.314449 -0.503763 -0.804577 -0.01642 REMARK 350 BIOMT2 49 0.498303 -0.809002 0.311785 -0.16199 REMARK 350 BIOMT3 49 -0.807970 -0.302883 0.505417 -0.00952 REMARK 350 BIOMT1 50 -0.813264 -0.307066 -0.494279 0.28818 REMARK 350 BIOMT2 50 -0.307066 -0.495065 0.812786 0.32949 REMARK 350 BIOMT3 50 -0.494279 0.812786 0.308330 -0.09582 REMARK 350 BIOMT1 51 -0.809001 0.312418 -0.497909 0.33833 REMARK 350 BIOMT2 51 -0.303124 0.504007 0.808760 0.41206 REMARK 350 BIOMT3 51 0.503621 0.805215 -0.313041 -0.67240 REMARK 350 BIOMT1 52 -0.004824 -0.999981 0.003964 0.21394 REMARK 350 BIOMT2 52 0.000883 0.003960 0.999992 0.36538 REMARK 350 BIOMT3 52 -0.999988 0.004827 0.000864 -0.15379 REMARK 350 BIOMT1 53 -0.809001 -0.303124 0.503621 0.73724 REMARK 350 BIOMT2 53 0.312418 0.504007 0.805215 0.22804 REMARK 350 BIOMT3 53 -0.497909 0.808760 -0.313041 -0.37529 REMARK 350 BIOMT1 54 -0.495546 0.812638 0.306681 0.65109 REMARK 350 BIOMT2 54 0.812638 0.309101 0.494040 -0.07721 REMARK 350 BIOMT3 54 0.306681 0.494040 -0.813555 -0.86638 REMARK 350 BIOMT1 55 0.502357 0.805361 -0.314692 0.07454 REMARK 350 BIOMT2 55 0.810256 -0.311405 0.496499 -0.12853 REMARK 350 BIOMT3 55 0.301865 -0.504401 -0.808986 -0.94840 REMARK 350 BIOMT1 56 -0.804727 0.313437 0.504154 0.78902 REMARK 350 BIOMT2 56 0.313437 -0.496896 0.809229 0.14384 REMARK 350 BIOMT3 56 0.504154 0.809229 0.301623 -0.39503 REMARK 350 BIOMT1 57 0.805640 -0.314899 -0.501781 -0.19564 REMARK 350 BIOMT2 57 0.308564 -0.499992 0.809195 0.14500 REMARK 350 BIOMT3 57 -0.505701 -0.806751 -0.305647 -0.50799 REMARK 350 BIOMT1 58 0.004834 0.999988 -0.001031 0.38009 REMARK 350 BIOMT2 58 0.005841 0.001003 0.999982 0.36365 REMARK 350 BIOMT3 58 0.999971 -0.004840 -0.005836 -0.75033 REMARK 350 BIOMT1 59 0.809917 0.304595 -0.501254 -0.14362 REMARK 350 BIOMT2 59 0.312516 0.499088 0.808236 0.22896 REMARK 350 BIOMT3 59 0.496355 -0.811254 0.309029 -0.52815 REMARK 350 BIOMT1 60 0.497925 -0.811732 -0.305224 -0.05836 REMARK 350 BIOMT2 60 0.809646 0.309023 0.498977 -0.07410 REMARK 350 BIOMT3 60 -0.310714 -0.495577 0.811086 -0.03555 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 LYS A 2 REMARK 465 GLN A 3 REMARK 465 ASN A 4 REMARK 465 ASP A 5 REMARK 465 THR A 6 REMARK 465 LYS A 7 REMARK 465 LYS A 8 REMARK 465 THR A 9 REMARK 465 THR A 10 REMARK 465 GLN A 11 REMARK 465 ARG A 12 REMARK 465 ARG A 13 REMARK 465 ASN A 14 REMARK 465 SER A 15 REMARK 465 LYS A 16 REMARK 465 LYS A 17 REMARK 465 TYR A 18 REMARK 465 SER A 19 REMARK 465 SER A 20 REMARK 465 LYS A 21 REMARK 465 THR A 22 REMARK 465 ASN A 23 REMARK 465 ARG A 24 REMARK 465 GLY A 25 REMARK 465 THR A 26 REMARK 465 LYS A 27 REMARK 465 ARG A 28 REMARK 465 ALA A 29 REMARK 465 PRO A 30 REMARK 465 ARG A 31 REMARK 465 ASP A 32 REMARK 465 GLN A 33 REMARK 465 GLU A 34 REMARK 465 VAL A 35 REMARK 465 GLY A 36 REMARK 465 THR A 37 REMARK 465 GLY A 38 REMARK 465 ALA A 39 REMARK 465 GLN A 40 REMARK 465 GLU A 41 REMARK 465 SER A 42 REMARK 465 PHE A 550 REMARK 465 ASN A 551 REMARK 465 LYS A 552 REMARK 465 MET B 1 REMARK 465 LYS B 2 REMARK 465 GLN B 3 REMARK 465 ASN B 4 REMARK 465 ASP B 5 REMARK 465 THR B 6 REMARK 465 LYS B 7 REMARK 465 LYS B 8 REMARK 465 THR B 9 REMARK 465 THR B 10 REMARK 465 GLN B 11 REMARK 465 ARG B 12 REMARK 465 ARG B 13 REMARK 465 ASN B 14 REMARK 465 SER B 15 REMARK 465 LYS B 16 REMARK 465 LYS B 17 REMARK 465 TYR B 18 REMARK 465 SER B 19 REMARK 465 SER B 20 REMARK 465 LYS B 21 REMARK 465 THR B 22 REMARK 465 ASN B 23 REMARK 465 ARG B 24 REMARK 465 GLY B 25 REMARK 465 THR B 26 REMARK 465 LYS B 27 REMARK 465 ARG B 28 REMARK 465 ALA B 29 REMARK 465 PRO B 30 REMARK 465 ARG B 31 REMARK 465 ASP B 32 REMARK 465 GLN B 33 REMARK 465 GLU B 34 REMARK 465 VAL B 35 REMARK 465 GLY B 36 REMARK 465 THR B 37 REMARK 465 GLY B 38 REMARK 465 ALA B 39 REMARK 465 GLN B 40 REMARK 465 GLU B 41 REMARK 465 SER B 42 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 80 -8.04 72.77 REMARK 500 TRP A 85 52.08 -119.25 REMARK 500 SER A 218 48.04 -91.74 REMARK 500 ARG A 240 36.53 -98.26 REMARK 500 GLU A 255 70.56 57.72 REMARK 500 ASP A 321 -168.85 -104.76 REMARK 500 ASP A 384 18.74 -143.75 REMARK 500 GLN A 386 77.10 59.77 REMARK 500 ASP A 387 85.66 -64.67 REMARK 500 MET A 548 162.94 179.28 REMARK 500 ARG B 44 75.66 55.96 REMARK 500 TRP B 85 45.24 -108.90 REMARK 500 ASN B 372 17.99 58.42 REMARK 500 TRP B 499 59.08 -98.83 REMARK 500 ASN B 521 -151.23 -150.31 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-11115 RELATED DB: EMDB REMARK 900 HUMAN PICOBIRNAVIRUS CP VLP DBREF 6Z8D A 1 552 UNP Q50LE5 CAPSD_HPBVH 1 552 DBREF 6Z8D B 1 552 UNP Q50LE5 CAPSD_HPBVH 1 552 SEQRES 1 A 552 MET LYS GLN ASN ASP THR LYS LYS THR THR GLN ARG ARG SEQRES 2 A 552 ASN SER LYS LYS TYR SER SER LYS THR ASN ARG GLY THR SEQRES 3 A 552 LYS ARG ALA PRO ARG ASP GLN GLU VAL GLY THR GLY ALA SEQRES 4 A 552 GLN GLU SER THR ARG ASN ASP VAL ALA TRP TYR ALA ARG SEQRES 5 A 552 TYR PRO HIS ILE LEU GLU GLU ALA THR ARG LEU PRO PHE SEQRES 6 A 552 ALA TYR PRO ILE GLY GLN TYR TYR ASP THR GLY TYR SER SEQRES 7 A 552 VAL ALA SER ALA THR GLU TRP SER LYS TYR VAL ASP THR SEQRES 8 A 552 SER LEU THR ILE PRO GLY VAL MET CYS VAL ASN PHE THR SEQRES 9 A 552 PRO THR PRO GLY GLU SER TYR ASN LYS ASN SER PRO ILE SEQRES 10 A 552 ASN ILE ALA ALA GLN ASN VAL TYR THR TYR VAL ARG HIS SEQRES 11 A 552 MET ASN SER GLY HIS ALA ASN TYR GLU GLN ALA ASP LEU SEQRES 12 A 552 MET MET TYR LEU LEU ALA MET ASP SER LEU TYR ILE PHE SEQRES 13 A 552 HIS SER TYR VAL ARG LYS ILE LEU ALA ILE SER LYS LEU SEQRES 14 A 552 TYR THR PRO VAL ASN LYS TYR PHE PRO ARG ALA LEU LEU SEQRES 15 A 552 VAL ALA LEU GLY VAL ASP PRO GLU ASP VAL PHE ALA ASN SEQRES 16 A 552 GLN ALA GLN TRP GLU TYR PHE VAL ASN MET VAL ALA TYR SEQRES 17 A 552 ARG ALA GLY ALA PHE ALA ALA PRO ALA SER MET THR TYR SEQRES 18 A 552 TYR GLU ARG HIS ALA TRP MET SER ASN GLY LEU TYR VAL SEQRES 19 A 552 ASP GLN ASP VAL THR ARG ALA GLN ILE TYR MET PHE LYS SEQRES 20 A 552 PRO THR MET LEU TRP LYS TYR GLU ASN LEU GLY THR THR SEQRES 21 A 552 GLY THR LYS LEU VAL PRO LEU MET MET PRO LYS ALA GLY SEQRES 22 A 552 ASP ASN ARG LYS LEU VAL ASP PHE GLN VAL LEU PHE ASN SEQRES 23 A 552 ASN LEU VAL SER THR MET LEU GLY ASP GLU ASP PHE GLY SEQRES 24 A 552 ILE MET SER GLY ASP VAL PHE LYS ALA PHE GLY ALA ASP SEQRES 25 A 552 GLY LEU VAL LYS LEU LEU ALA VAL ASP SER THR THR MET SEQRES 26 A 552 THR LEU PRO THR TYR ASP PRO LEU ILE LEU ALA GLN ILE SEQRES 27 A 552 HIS SER ALA ARG ALA VAL GLY ALA PRO ILE LEU GLU THR SEQRES 28 A 552 SER THR LEU THR GLY PHE PRO GLY ARG GLN TRP GLN ILE SEQRES 29 A 552 THR GLN ASN PRO ASP VAL ASN ASN GLY ALA ILE ILE PHE SEQRES 30 A 552 HIS PRO SER PHE GLY TYR ASP GLY GLN ASP HIS GLU GLU SEQRES 31 A 552 LEU SER PHE ARG ALA MET CYS SER ASN MET ILE LEU ASN SEQRES 32 A 552 LEU PRO GLY GLU ALA HIS SER ALA GLU MET ILE ILE GLU SEQRES 33 A 552 ALA THR ARG LEU ALA THR MET PHE GLN VAL LYS ALA VAL SEQRES 34 A 552 PRO ALA GLY ASP THR SER LYS PRO VAL LEU TYR LEU PRO SEQRES 35 A 552 ASN GLY PHE GLY THR GLU VAL VAL ASN ASP TYR THR MET SEQRES 36 A 552 ILE SER VAL ASP LYS ALA THR PRO HIS ASP LEU THR ILE SEQRES 37 A 552 HIS THR PHE PHE ASN ASN ILE LEU VAL PRO ASN ALA LYS SEQRES 38 A 552 GLU ASN TYR VAL ALA ASN LEU GLU LEU LEU ASN ASN ILE SEQRES 39 A 552 ILE GLN PHE ASP TRP ALA PRO GLN LEU TYR LEU THR TYR SEQRES 40 A 552 GLY ILE ALA GLN GLU SER PHE GLY PRO PHE ALA GLN LEU SEQRES 41 A 552 ASN ASP TRP THR ILE LEU THR GLY GLU THR LEU ALA ARG SEQRES 42 A 552 MET HIS GLU VAL CYS VAL THR SER MET PHE ASP VAL PRO SEQRES 43 A 552 GLN MET GLY PHE ASN LYS SEQRES 1 B 552 MET LYS GLN ASN ASP THR LYS LYS THR THR GLN ARG ARG SEQRES 2 B 552 ASN SER LYS LYS TYR SER SER LYS THR ASN ARG GLY THR SEQRES 3 B 552 LYS ARG ALA PRO ARG ASP GLN GLU VAL GLY THR GLY ALA SEQRES 4 B 552 GLN GLU SER THR ARG ASN ASP VAL ALA TRP TYR ALA ARG SEQRES 5 B 552 TYR PRO HIS ILE LEU GLU GLU ALA THR ARG LEU PRO PHE SEQRES 6 B 552 ALA TYR PRO ILE GLY GLN TYR TYR ASP THR GLY TYR SER SEQRES 7 B 552 VAL ALA SER ALA THR GLU TRP SER LYS TYR VAL ASP THR SEQRES 8 B 552 SER LEU THR ILE PRO GLY VAL MET CYS VAL ASN PHE THR SEQRES 9 B 552 PRO THR PRO GLY GLU SER TYR ASN LYS ASN SER PRO ILE SEQRES 10 B 552 ASN ILE ALA ALA GLN ASN VAL TYR THR TYR VAL ARG HIS SEQRES 11 B 552 MET ASN SER GLY HIS ALA ASN TYR GLU GLN ALA ASP LEU SEQRES 12 B 552 MET MET TYR LEU LEU ALA MET ASP SER LEU TYR ILE PHE SEQRES 13 B 552 HIS SER TYR VAL ARG LYS ILE LEU ALA ILE SER LYS LEU SEQRES 14 B 552 TYR THR PRO VAL ASN LYS TYR PHE PRO ARG ALA LEU LEU SEQRES 15 B 552 VAL ALA LEU GLY VAL ASP PRO GLU ASP VAL PHE ALA ASN SEQRES 16 B 552 GLN ALA GLN TRP GLU TYR PHE VAL ASN MET VAL ALA TYR SEQRES 17 B 552 ARG ALA GLY ALA PHE ALA ALA PRO ALA SER MET THR TYR SEQRES 18 B 552 TYR GLU ARG HIS ALA TRP MET SER ASN GLY LEU TYR VAL SEQRES 19 B 552 ASP GLN ASP VAL THR ARG ALA GLN ILE TYR MET PHE LYS SEQRES 20 B 552 PRO THR MET LEU TRP LYS TYR GLU ASN LEU GLY THR THR SEQRES 21 B 552 GLY THR LYS LEU VAL PRO LEU MET MET PRO LYS ALA GLY SEQRES 22 B 552 ASP ASN ARG LYS LEU VAL ASP PHE GLN VAL LEU PHE ASN SEQRES 23 B 552 ASN LEU VAL SER THR MET LEU GLY ASP GLU ASP PHE GLY SEQRES 24 B 552 ILE MET SER GLY ASP VAL PHE LYS ALA PHE GLY ALA ASP SEQRES 25 B 552 GLY LEU VAL LYS LEU LEU ALA VAL ASP SER THR THR MET SEQRES 26 B 552 THR LEU PRO THR TYR ASP PRO LEU ILE LEU ALA GLN ILE SEQRES 27 B 552 HIS SER ALA ARG ALA VAL GLY ALA PRO ILE LEU GLU THR SEQRES 28 B 552 SER THR LEU THR GLY PHE PRO GLY ARG GLN TRP GLN ILE SEQRES 29 B 552 THR GLN ASN PRO ASP VAL ASN ASN GLY ALA ILE ILE PHE SEQRES 30 B 552 HIS PRO SER PHE GLY TYR ASP GLY GLN ASP HIS GLU GLU SEQRES 31 B 552 LEU SER PHE ARG ALA MET CYS SER ASN MET ILE LEU ASN SEQRES 32 B 552 LEU PRO GLY GLU ALA HIS SER ALA GLU MET ILE ILE GLU SEQRES 33 B 552 ALA THR ARG LEU ALA THR MET PHE GLN VAL LYS ALA VAL SEQRES 34 B 552 PRO ALA GLY ASP THR SER LYS PRO VAL LEU TYR LEU PRO SEQRES 35 B 552 ASN GLY PHE GLY THR GLU VAL VAL ASN ASP TYR THR MET SEQRES 36 B 552 ILE SER VAL ASP LYS ALA THR PRO HIS ASP LEU THR ILE SEQRES 37 B 552 HIS THR PHE PHE ASN ASN ILE LEU VAL PRO ASN ALA LYS SEQRES 38 B 552 GLU ASN TYR VAL ALA ASN LEU GLU LEU LEU ASN ASN ILE SEQRES 39 B 552 ILE GLN PHE ASP TRP ALA PRO GLN LEU TYR LEU THR TYR SEQRES 40 B 552 GLY ILE ALA GLN GLU SER PHE GLY PRO PHE ALA GLN LEU SEQRES 41 B 552 ASN ASP TRP THR ILE LEU THR GLY GLU THR LEU ALA ARG SEQRES 42 B 552 MET HIS GLU VAL CYS VAL THR SER MET PHE ASP VAL PRO SEQRES 43 B 552 GLN MET GLY PHE ASN LYS HELIX 1 AA1 ALA A 48 TYR A 53 1 6 HELIX 2 AA2 TYR A 53 THR A 61 1 9 HELIX 3 AA3 SER A 81 TRP A 85 5 5 HELIX 4 AA4 SER A 115 HIS A 130 1 16 HELIX 5 AA5 GLU A 139 SER A 167 1 29 HELIX 6 AA6 PRO A 178 LEU A 185 1 8 HELIX 7 AA7 ASP A 188 ASN A 195 1 8 HELIX 8 AA8 ASN A 195 GLY A 211 1 17 HELIX 9 AA9 MET A 219 ASN A 230 1 12 HELIX 10 AB1 LYS A 277 VAL A 289 1 13 HELIX 11 AB2 ASP A 295 PHE A 309 1 15 HELIX 12 AB3 GLY A 310 LEU A 314 5 5 HELIX 13 AB4 ASP A 331 SER A 340 1 10 HELIX 14 AB5 VAL A 370 ALA A 374 5 5 HELIX 15 AB6 GLU A 390 SER A 398 5 9 HELIX 16 AB7 SER A 410 ALA A 417 1 8 HELIX 17 AB8 LYS A 481 ILE A 495 1 15 HELIX 18 AB9 THR A 527 PHE A 543 1 17 HELIX 19 AC1 VAL B 47 TYR B 53 1 7 HELIX 20 AC2 TYR B 53 THR B 61 1 9 HELIX 21 AC3 SER B 81 VAL B 89 5 9 HELIX 22 AC4 SER B 115 HIS B 130 1 16 HELIX 23 AC5 GLU B 139 SER B 167 1 29 HELIX 24 AC6 PRO B 178 LEU B 185 1 8 HELIX 25 AC7 ASP B 188 ASN B 195 1 8 HELIX 26 AC8 ASN B 195 ALA B 210 1 16 HELIX 27 AC9 GLY B 211 PHE B 213 5 3 HELIX 28 AD1 MET B 219 SER B 229 1 11 HELIX 29 AD2 GLY B 258 THR B 260 5 3 HELIX 30 AD3 LYS B 277 VAL B 289 1 13 HELIX 31 AD4 ASP B 295 GLY B 310 1 16 HELIX 32 AD5 ASP B 331 HIS B 339 1 9 HELIX 33 AD6 VAL B 370 ALA B 374 5 5 HELIX 34 AD7 GLU B 390 CYS B 397 5 8 HELIX 35 AD8 SER B 410 ALA B 417 1 8 HELIX 36 AD9 GLU B 482 ILE B 495 1 14 HELIX 37 AE1 THR B 527 PHE B 543 1 17 SHEET 1 AA1 2 TYR A 73 ASP A 74 0 SHEET 2 AA1 2 SER A 92 LEU A 93 -1 O LEU A 93 N TYR A 73 SHEET 1 AA2 6 PRO A 328 THR A 329 0 SHEET 2 AA2 6 LEU A 232 VAL A 234 1 N LEU A 232 O THR A 329 SHEET 3 AA2 6 ILE A 243 PRO A 248 -1 O TYR A 244 N TYR A 233 SHEET 4 AA2 6 VAL A 98 PRO A 105 1 N VAL A 101 O MET A 245 SHEET 5 AA2 6 GLU A 448 VAL A 458 -1 O THR A 454 N CYS A 100 SHEET 6 AA2 6 LEU A 466 PHE A 471 -1 O THR A 467 N SER A 457 SHEET 1 AA3 3 MET A 250 LYS A 253 0 SHEET 2 AA3 3 GLY A 261 MET A 268 -1 O VAL A 265 N LYS A 253 SHEET 3 AA3 3 ASN A 256 GLY A 258 -1 N LEU A 257 O GLY A 261 SHEET 1 AA4 3 MET A 250 LYS A 253 0 SHEET 2 AA4 3 GLY A 261 MET A 268 -1 O VAL A 265 N LYS A 253 SHEET 3 AA4 3 ILE A 364 GLN A 366 -1 O ILE A 364 N LEU A 264 SHEET 1 AA5 2 ILE A 401 LEU A 404 0 SHEET 2 AA5 2 ASP A 522 ILE A 525 -1 O THR A 524 N LEU A 402 SHEET 1 AA6 2 PHE A 424 LYS A 427 0 SHEET 2 AA6 2 TYR A 440 PRO A 442 -1 O LEU A 441 N GLN A 425 SHEET 1 AA7 3 ASN A 474 VAL A 477 0 SHEET 2 AA7 3 LEU A 503 TYR A 507 1 O TYR A 504 N ILE A 475 SHEET 3 AA7 3 GLU A 512 PHE A 517 -1 O PHE A 514 N LEU A 505 SHEET 1 AA8 2 TYR B 73 ASP B 74 0 SHEET 2 AA8 2 SER B 92 LEU B 93 -1 O LEU B 93 N TYR B 73 SHEET 1 AA9 6 THR B 329 TYR B 330 0 SHEET 2 AA9 6 TYR B 233 VAL B 234 1 N VAL B 234 O THR B 329 SHEET 3 AA9 6 ILE B 243 PRO B 248 -1 O TYR B 244 N TYR B 233 SHEET 4 AA9 6 VAL B 98 PRO B 105 1 N VAL B 101 O MET B 245 SHEET 5 AA9 6 GLU B 448 VAL B 458 -1 O THR B 454 N CYS B 100 SHEET 6 AA9 6 LEU B 466 PHE B 471 -1 O THR B 467 N SER B 457 SHEET 1 AB1 3 MET B 250 ASN B 256 0 SHEET 2 AB1 3 THR B 262 MET B 268 -1 O VAL B 265 N LYS B 253 SHEET 3 AB1 3 ILE B 364 GLN B 366 -1 O ILE B 364 N LEU B 264 SHEET 1 AB2 2 MET B 400 LEU B 404 0 SHEET 2 AB2 2 ASP B 522 LEU B 526 -1 O ASP B 522 N LEU B 404 SHEET 1 AB3 2 PHE B 424 LYS B 427 0 SHEET 2 AB3 2 TYR B 440 PRO B 442 -1 O LEU B 441 N GLN B 425 SHEET 1 AB4 3 ASN B 474 VAL B 477 0 SHEET 2 AB4 3 LEU B 503 TYR B 507 1 O THR B 506 N VAL B 477 SHEET 3 AB4 3 GLU B 512 PHE B 517 -1 O PHE B 514 N LEU B 505 CISPEP 1 PHE A 177 PRO A 178 0 -3.29 CISPEP 2 THR A 462 PRO A 463 0 5.21 CISPEP 3 PHE B 177 PRO B 178 0 -4.90 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000