HEADER VIRUS LIKE PARTICLE 02-JUN-20 6Z8F TITLE HUMAN PICOBIRNAVIRUS D45-CP VLP COMPND MOL_ID: 1; COMPND 2 MOLECULE: CAPSID PROTEIN PRECURSOR; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HUMAN PICOBIRNAVIRUS (STRAIN SOURCE 3 HUMAN/THAILAND/HY005102/-); SOURCE 4 ORGANISM_TAXID: 647332; SOURCE 5 GENE: SEGMENT-1, ORF2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS HUMAN PICOBIRNAVIRUS, CRYOEM, ASSEMBLY, CAPSID PROTEIN, VIRUS LIKE KEYWDS 2 PARTICLE EXPDTA ELECTRON MICROSCOPY AUTHOR A.ORTEGA-ESTEBAN,C.P.MATA,M.J.RODRIGUEZ-ESPINOSA,D.LUQUE,N.IRIGOYEN, AUTHOR 2 J.M.RODRIGUEZ,P.J.DE PABLO,J.R.CASTON REVDAT 4 01-MAY-24 6Z8F 1 REMARK REVDAT 3 02-DEC-20 6Z8F 1 JRNL REVDAT 2 21-OCT-20 6Z8F 1 JRNL REVDAT 1 16-SEP-20 6Z8F 0 JRNL AUTH A.ORTEGA-ESTEBAN,C.P.MATA,M.J.RODRIGUEZ-ESPINOSA,D.LUQUE, JRNL AUTH 2 N.IRIGOYEN,J.M.RODRIGUEZ,P.J.DE PABLO,J.R.CASTON JRNL TITL CRYO-ELECTRON MICROSCOPY STRUCTURE, ASSEMBLY, AND MECHANICS JRNL TITL 2 SHOW MORPHOGENESIS AND EVOLUTION OF HUMAN PICOBIRNAVIRUS. JRNL REF J.VIROL. V. 94 2020 JRNL REFN ESSN 1098-5514 JRNL PMID 32938763 JRNL DOI 10.1128/JVI.01542-20 REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : RELION, EPU, CTFFIND, COOT, PHENIX, REMARK 3 RELION, RELION, RELION, RELION REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : REAL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 2.800 REMARK 3 NUMBER OF PARTICLES : 51194 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 6Z8F COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 02-JUN-20. REMARK 100 THE DEPOSITION ID IS D_1292109111. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : HUMAN PICOBIRNAVIRUS REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.50 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : 1990 REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : FEI FALCON III (4K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 800.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 3500.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : 2.70 REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 156.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : 75000 REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: 120-MERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.809031 0.308982 0.00974 REMARK 350 BIOMT2 2 0.809009 -0.309026 0.500008 0.00967 REMARK 350 BIOMT3 2 -0.309038 0.499973 0.809026 -0.00369 REMARK 350 BIOMT1 3 -0.499993 -0.809020 0.309020 0.00974 REMARK 350 BIOMT2 3 -0.809020 0.309008 -0.500001 -0.00411 REMARK 350 BIOMT3 3 0.309021 -0.500001 -0.809015 -0.02653 REMARK 350 BIOMT1 4 -0.809017 0.309012 0.500003 0.01010 REMARK 350 BIOMT2 4 -0.309013 0.500015 -0.809010 -0.01025 REMARK 350 BIOMT3 4 -0.500003 -0.809010 -0.309032 -0.01659 REMARK 350 BIOMT1 5 0.000007 1.000000 0.000020 -0.00090 REMARK 350 BIOMT2 5 0.000026 0.000020 -1.000000 -0.01233 REMARK 350 BIOMT3 5 -1.000000 0.000007 -0.000026 -0.01324 REMARK 350 BIOMT1 6 0.809034 0.309022 -0.499969 -0.00806 REMARK 350 BIOMT2 6 -0.308984 -0.500000 -0.809030 -0.00748 REMARK 350 BIOMT3 6 -0.499992 0.809015 -0.309034 -0.02110 REMARK 350 BIOMT1 7 0.500017 -0.809014 -0.308996 -0.00147 REMARK 350 BIOMT2 7 -0.809003 -0.309034 -0.500013 -0.00240 REMARK 350 BIOMT3 7 0.309027 0.499994 -0.809017 -0.02932 REMARK 350 BIOMT1 8 0.309034 0.500025 -0.808995 -0.01232 REMARK 350 BIOMT2 8 0.500025 -0.809001 -0.309020 -0.00058 REMARK 350 BIOMT3 8 -0.808995 -0.309020 -0.500034 -0.02029 REMARK 350 BIOMT1 9 0.309056 -0.499985 -0.809011 -0.00954 REMARK 350 BIOMT2 9 -0.499985 -0.809034 0.308997 0.01064 REMARK 350 BIOMT3 9 -0.809011 0.308996 -0.500022 -0.02201 REMARK 350 BIOMT1 10 -0.499972 -0.809032 -0.309024 0.00040 REMARK 350 BIOMT2 10 -0.809032 0.308990 0.499993 0.01100 REMARK 350 BIOMT3 10 -0.309024 0.499993 -0.809019 -0.02815 REMARK 350 BIOMT1 11 -1.000000 -0.000022 0.000000 0.00376 REMARK 350 BIOMT2 11 -0.000022 1.000000 0.000018 0.00000 REMARK 350 BIOMT3 11 0.000000 0.000018 -1.000000 -0.03023 REMARK 350 BIOMT1 12 0.499989 -0.809026 0.309009 0.00786 REMARK 350 BIOMT2 12 0.809025 0.309017 -0.499987 -0.00716 REMARK 350 BIOMT3 12 0.309014 0.499985 0.809028 -0.00486 REMARK 350 BIOMT1 13 -0.500007 0.809020 -0.308999 -0.00410 REMARK 350 BIOMT2 13 0.809020 0.309044 -0.499979 -0.00716 REMARK 350 BIOMT3 13 -0.308999 -0.499979 -0.809037 -0.02537 REMARK 350 BIOMT1 14 -0.500000 -0.809007 -0.309042 0.00040 REMARK 350 BIOMT2 14 0.809021 -0.309008 -0.500000 -0.00544 REMARK 350 BIOMT3 14 0.309007 -0.500021 0.809008 -0.00208 REMARK 350 BIOMT1 15 -1.000000 0.000000 -0.000035 0.00376 REMARK 350 BIOMT2 15 0.000000 -1.000000 -0.000018 0.00556 REMARK 350 BIOMT3 15 -0.000035 -0.000018 1.000000 0.00000 REMARK 350 BIOMT1 16 -0.500000 0.809009 -0.309038 -0.00410 REMARK 350 BIOMT2 16 -0.809031 -0.309026 0.499972 0.01272 REMARK 350 BIOMT3 16 0.308981 0.500008 0.809026 -0.00486 REMARK 350 BIOMT1 17 0.309017 0.499997 -0.809019 -0.01232 REMARK 350 BIOMT2 17 -0.500018 0.809011 0.309002 0.00614 REMARK 350 BIOMT3 17 0.809006 0.309037 0.500006 -0.00994 REMARK 350 BIOMT1 18 0.309017 -0.499993 -0.809022 -0.00953 REMARK 350 BIOMT2 18 0.499993 0.809023 -0.309014 -0.00508 REMARK 350 BIOMT3 18 0.809022 -0.309014 0.499994 -0.00822 REMARK 350 BIOMT1 19 0.000028 -0.000008 -1.000000 -0.01324 REMARK 350 BIOMT2 19 -1.000000 -0.000020 -0.000028 0.00467 REMARK 350 BIOMT3 19 -0.000020 1.000000 -0.000008 -0.01790 REMARK 350 BIOMT1 20 -0.309006 -0.500010 -0.809015 -0.00838 REMARK 350 BIOMT2 20 -0.500014 0.809006 -0.309023 -0.00320 REMARK 350 BIOMT3 20 0.809012 0.309029 -0.500000 -0.02506 REMARK 350 BIOMT1 21 -0.809017 -0.309012 -0.500003 -0.00329 REMARK 350 BIOMT2 21 0.309013 0.500015 -0.809010 -0.01142 REMARK 350 BIOMT3 21 0.500003 -0.809010 -0.309032 -0.01847 REMARK 350 BIOMT1 22 -0.809006 0.309032 -0.500008 -0.00502 REMARK 350 BIOMT2 22 0.309033 -0.499979 -0.809024 -0.00863 REMARK 350 BIOMT3 22 -0.500008 -0.809024 0.308985 -0.00726 REMARK 350 BIOMT1 23 -0.309045 -0.500007 0.809002 0.01609 REMARK 350 BIOMT2 23 0.500004 -0.809017 -0.309011 -0.00058 REMARK 350 BIOMT3 23 0.809004 0.309006 0.500028 -0.00994 REMARK 350 BIOMT1 24 -0.308989 0.500007 -0.809023 -0.01116 REMARK 350 BIOMT2 24 -0.499981 -0.809017 -0.309046 0.00131 REMARK 350 BIOMT3 24 -0.809039 0.309005 0.499972 -0.00690 REMARK 350 BIOMT1 25 0.809000 0.309041 0.500013 0.00706 REMARK 350 BIOMT2 25 -0.309021 -0.500000 0.809015 0.01698 REMARK 350 BIOMT3 25 0.500025 -0.809008 -0.309000 -0.01848 REMARK 350 BIOMT1 26 0.809024 -0.309004 0.499997 0.00878 REMARK 350 BIOMT2 26 -0.309023 0.499993 0.809019 0.01421 REMARK 350 BIOMT3 26 -0.499985 -0.809026 0.309017 -0.00725 REMARK 350 BIOMT1 27 0.309017 -0.500018 0.809006 0.01492 REMARK 350 BIOMT2 27 0.499996 0.809011 0.309037 0.00426 REMARK 350 BIOMT3 27 -0.809019 0.309002 0.500005 -0.00689 REMARK 350 BIOMT1 28 -0.000028 -0.000027 1.000000 0.01700 REMARK 350 BIOMT2 28 1.000000 0.000002 0.000028 0.00090 REMARK 350 BIOMT3 28 -0.000002 1.000000 0.000027 -0.01789 REMARK 350 BIOMT1 29 0.308978 0.499999 0.809033 0.01214 REMARK 350 BIOMT2 29 0.499999 -0.809012 0.309032 0.00876 REMARK 350 BIOMT3 29 0.809033 0.309032 -0.499966 -0.02505 REMARK 350 BIOMT1 30 -0.309028 0.499975 0.809028 0.01330 REMARK 350 BIOMT2 30 0.500000 0.809028 -0.308988 -0.00508 REMARK 350 BIOMT3 30 -0.809013 0.309028 -0.500000 -0.02201 REMARK 350 BIOMT1 31 0.499983 0.809014 0.309053 0.00337 REMARK 350 BIOMT2 31 0.809037 -0.308999 -0.499978 -0.00544 REMARK 350 BIOMT3 31 -0.308992 0.500016 -0.809017 -0.02816 REMARK 350 BIOMT1 32 1.000000 0.000022 0.000035 0.00000 REMARK 350 BIOMT2 32 0.000022 -1.000000 0.000000 0.00556 REMARK 350 BIOMT3 32 0.000035 0.000000 -1.000000 -0.03023 REMARK 350 BIOMT1 33 0.500017 -0.809002 0.309027 0.00786 REMARK 350 BIOMT2 33 -0.809014 -0.309034 0.499994 0.01272 REMARK 350 BIOMT3 33 -0.308996 -0.500013 -0.809017 -0.02538 REMARK 350 BIOMT1 34 -0.309045 0.500004 0.809004 0.01330 REMARK 350 BIOMT2 34 -0.500008 -0.809017 0.309005 0.01064 REMARK 350 BIOMT3 34 0.809002 -0.309011 0.500028 -0.00822 REMARK 350 BIOMT1 35 -0.309006 -0.500014 0.809012 0.01608 REMARK 350 BIOMT2 35 -0.500010 0.809006 0.309029 0.00614 REMARK 350 BIOMT3 35 -0.809015 -0.309023 -0.500000 -0.02030 REMARK 350 BIOMT1 36 -0.500000 0.809021 0.309007 0.00524 REMARK 350 BIOMT2 36 -0.809007 -0.309009 -0.500021 -0.00239 REMARK 350 BIOMT3 36 -0.309041 -0.499999 0.809008 -0.00092 REMARK 350 BIOMT1 37 0.500011 0.809013 -0.309010 -0.00598 REMARK 350 BIOMT2 37 -0.809003 0.309017 -0.500022 -0.00411 REMARK 350 BIOMT3 37 -0.309035 0.500006 0.809006 -0.00370 REMARK 350 BIOMT1 38 0.809024 -0.309024 -0.499985 -0.00633 REMARK 350 BIOMT2 38 -0.309004 0.499993 -0.809026 -0.01026 REMARK 350 BIOMT3 38 0.499997 0.809019 0.309017 -0.01364 REMARK 350 BIOMT1 39 -0.000007 -1.000000 0.000001 0.00466 REMARK 350 BIOMT2 39 0.000009 -0.000001 -1.000000 -0.01233 REMARK 350 BIOMT3 39 1.000000 -0.000007 0.000009 -0.01700 REMARK 350 BIOMT1 40 -0.809028 -0.309011 0.499986 0.01182 REMARK 350 BIOMT2 40 -0.309011 -0.499992 -0.809024 -0.00747 REMARK 350 BIOMT3 40 0.499986 -0.809024 0.309020 -0.00914 REMARK 350 BIOMT1 41 0.809000 -0.309021 0.500025 0.00878 REMARK 350 BIOMT2 41 0.309041 -0.500000 -0.809008 -0.00864 REMARK 350 BIOMT3 41 0.500013 0.809015 -0.309000 -0.02298 REMARK 350 BIOMT1 42 0.308999 -0.499990 0.809030 0.01492 REMARK 350 BIOMT2 42 -0.499990 -0.809022 -0.309020 0.00130 REMARK 350 BIOMT3 42 0.809030 -0.309020 -0.499977 -0.02334 REMARK 350 BIOMT1 43 -0.000007 0.000009 1.000000 0.01699 REMARK 350 BIOMT2 43 -1.000000 -0.000002 -0.000007 0.00466 REMARK 350 BIOMT3 43 0.000002 -1.000000 0.000009 -0.01233 REMARK 350 BIOMT1 44 0.309017 0.499992 0.809022 0.01214 REMARK 350 BIOMT2 44 -0.499993 0.809023 -0.309014 -0.00319 REMARK 350 BIOMT3 44 -0.809022 -0.309014 0.499994 -0.00518 REMARK 350 BIOMT1 45 0.499990 0.809025 0.309013 0.00336 REMARK 350 BIOMT2 45 -0.809026 0.309017 0.499985 0.01101 REMARK 350 BIOMT3 45 0.309010 -0.499987 0.809028 -0.00207 REMARK 350 BIOMT1 46 0.809010 0.309002 0.500020 0.00706 REMARK 350 BIOMT2 46 0.309039 0.500007 -0.809004 -0.01142 REMARK 350 BIOMT3 46 -0.499998 0.809018 0.309017 -0.01176 REMARK 350 BIOMT1 47 -0.309028 0.500000 -0.809013 -0.01115 REMARK 350 BIOMT2 47 0.499975 0.809028 0.309028 0.00426 REMARK 350 BIOMT3 47 0.809028 -0.308988 -0.500000 -0.02333 REMARK 350 BIOMT1 48 0.000007 0.000026 -1.000000 -0.01324 REMARK 350 BIOMT2 48 1.000000 0.000020 0.000007 0.00090 REMARK 350 BIOMT3 48 0.000020 -1.000000 -0.000026 -0.01234 REMARK 350 BIOMT1 49 -0.308989 -0.499981 -0.809039 -0.00838 REMARK 350 BIOMT2 49 0.500007 -0.809017 0.309005 0.00876 REMARK 350 BIOMT3 49 -0.809023 -0.309046 0.499972 -0.00517 REMARK 350 BIOMT1 50 -0.808993 -0.309030 -0.500031 -0.00329 REMARK 350 BIOMT2 50 -0.309030 -0.500021 0.808999 0.01699 REMARK 350 BIOMT3 50 -0.500031 0.808999 0.309014 -0.01176 REMARK 350 BIOMT1 51 -0.809017 0.308993 -0.500015 -0.00501 REMARK 350 BIOMT2 51 -0.309050 0.499985 0.809013 0.01420 REMARK 350 BIOMT3 51 0.499979 0.809035 -0.309002 -0.02298 REMARK 350 BIOMT1 52 0.000028 -1.000000 -0.000020 0.00467 REMARK 350 BIOMT2 52 -0.000008 -0.000020 1.000000 0.01790 REMARK 350 BIOMT3 52 -1.000000 -0.000028 -0.000008 -0.01323 REMARK 350 BIOMT1 53 -0.809017 -0.309050 0.499980 0.01182 REMARK 350 BIOMT2 53 0.308993 0.499985 0.809035 0.01303 REMARK 350 BIOMT3 53 -0.500015 0.809014 -0.309002 -0.02110 REMARK 350 BIOMT1 54 -0.500029 0.808996 0.309025 0.00524 REMARK 350 BIOMT2 54 0.808997 0.309026 0.500028 0.00796 REMARK 350 BIOMT3 54 0.309024 0.500028 -0.808997 -0.02931 REMARK 350 BIOMT1 55 0.499983 0.809037 -0.308993 -0.00598 REMARK 350 BIOMT2 55 0.809014 -0.309000 0.500015 0.00968 REMARK 350 BIOMT3 55 0.309052 -0.499978 -0.809017 -0.02654 REMARK 350 BIOMT1 56 -0.809041 0.308995 0.499974 0.01010 REMARK 350 BIOMT2 56 0.308995 -0.500008 0.809021 0.01582 REMARK 350 BIOMT3 56 0.499975 0.809020 0.309049 -0.01363 REMARK 350 BIOMT1 57 0.809034 -0.308984 -0.499992 -0.00634 REMARK 350 BIOMT2 57 0.309022 -0.500000 0.809015 0.01582 REMARK 350 BIOMT3 57 -0.499969 -0.809030 -0.309034 -0.01660 REMARK 350 BIOMT1 58 -0.000028 1.000000 -0.000002 -0.00090 REMARK 350 BIOMT2 58 -0.000027 0.000002 1.000000 0.01790 REMARK 350 BIOMT3 58 1.000000 0.000028 0.000027 -0.01700 REMARK 350 BIOMT1 59 0.809010 0.309039 -0.499997 -0.00806 REMARK 350 BIOMT2 59 0.309002 0.500007 0.809019 0.01304 REMARK 350 BIOMT3 59 0.500020 -0.809005 0.309017 -0.00913 REMARK 350 BIOMT1 60 0.500011 -0.809004 -0.309035 -0.00148 REMARK 350 BIOMT2 60 0.809013 0.309017 0.500006 0.00796 REMARK 350 BIOMT3 60 -0.309010 -0.500022 0.809006 -0.00092 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 41 REMARK 465 SER A 42 REMARK 465 THR A 43 REMARK 465 ARG A 44 REMARK 465 ASN A 45 REMARK 465 PHE A 550 REMARK 465 ASN A 551 REMARK 465 LYS A 552 REMARK 465 GLU B 41 REMARK 465 SER B 42 REMARK 465 THR B 43 REMARK 465 ARG B 44 REMARK 465 ASN B 45 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TRP A 85 52.53 -119.32 REMARK 500 ASN A 230 56.68 -97.19 REMARK 500 ARG A 240 51.96 -93.33 REMARK 500 ASP A 321 31.99 -140.66 REMARK 500 GLU A 389 74.26 58.08 REMARK 500 ASN A 443 40.64 -108.53 REMARK 500 TRP A 499 62.40 -101.39 REMARK 500 ASN A 521 -151.76 -152.31 REMARK 500 THR B 61 -73.01 -82.73 REMARK 500 ARG B 62 63.72 35.38 REMARK 500 PHE B 65 101.73 62.87 REMARK 500 ALA B 66 49.95 91.71 REMARK 500 TYR B 67 136.58 -36.56 REMARK 500 ARG B 240 79.91 -110.54 REMARK 500 THR B 260 48.50 -89.77 REMARK 500 ARG B 360 25.60 -143.51 REMARK 500 ASN B 372 59.72 39.28 REMARK 500 GLU B 482 47.57 -91.67 REMARK 500 ASN B 483 -31.23 -132.03 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-11117 RELATED DB: EMDB REMARK 900 HUMAN PICOBIRNAVIRUS D45-CP VLP DBREF 6Z8F A 41 552 UNP Q50LE5 CAPSD_HPBVH 41 552 DBREF 6Z8F B 41 552 UNP Q50LE5 CAPSD_HPBVH 41 552 SEQRES 1 A 512 GLU SER THR ARG ASN ASP VAL ALA TRP TYR ALA ARG TYR SEQRES 2 A 512 PRO HIS ILE LEU GLU GLU ALA THR ARG LEU PRO PHE ALA SEQRES 3 A 512 TYR PRO ILE GLY GLN TYR TYR ASP THR GLY TYR SER VAL SEQRES 4 A 512 ALA SER ALA THR GLU TRP SER LYS TYR VAL ASP THR SER SEQRES 5 A 512 LEU THR ILE PRO GLY VAL MET CYS VAL ASN PHE THR PRO SEQRES 6 A 512 THR PRO GLY GLU SER TYR ASN LYS ASN SER PRO ILE ASN SEQRES 7 A 512 ILE ALA ALA GLN ASN VAL TYR THR TYR VAL ARG HIS MET SEQRES 8 A 512 ASN SER GLY HIS ALA ASN TYR GLU GLN ALA ASP LEU MET SEQRES 9 A 512 MET TYR LEU LEU ALA MET ASP SER LEU TYR ILE PHE HIS SEQRES 10 A 512 SER TYR VAL ARG LYS ILE LEU ALA ILE SER LYS LEU TYR SEQRES 11 A 512 THR PRO VAL ASN LYS TYR PHE PRO ARG ALA LEU LEU VAL SEQRES 12 A 512 ALA LEU GLY VAL ASP PRO GLU ASP VAL PHE ALA ASN GLN SEQRES 13 A 512 ALA GLN TRP GLU TYR PHE VAL ASN MET VAL ALA TYR ARG SEQRES 14 A 512 ALA GLY ALA PHE ALA ALA PRO ALA SER MET THR TYR TYR SEQRES 15 A 512 GLU ARG HIS ALA TRP MET SER ASN GLY LEU TYR VAL ASP SEQRES 16 A 512 GLN ASP VAL THR ARG ALA GLN ILE TYR MET PHE LYS PRO SEQRES 17 A 512 THR MET LEU TRP LYS TYR GLU ASN LEU GLY THR THR GLY SEQRES 18 A 512 THR LYS LEU VAL PRO LEU MET MET PRO LYS ALA GLY ASP SEQRES 19 A 512 ASN ARG LYS LEU VAL ASP PHE GLN VAL LEU PHE ASN ASN SEQRES 20 A 512 LEU VAL SER THR MET LEU GLY ASP GLU ASP PHE GLY ILE SEQRES 21 A 512 MET SER GLY ASP VAL PHE LYS ALA PHE GLY ALA ASP GLY SEQRES 22 A 512 LEU VAL LYS LEU LEU ALA VAL ASP SER THR THR MET THR SEQRES 23 A 512 LEU PRO THR TYR ASP PRO LEU ILE LEU ALA GLN ILE HIS SEQRES 24 A 512 SER ALA ARG ALA VAL GLY ALA PRO ILE LEU GLU THR SER SEQRES 25 A 512 THR LEU THR GLY PHE PRO GLY ARG GLN TRP GLN ILE THR SEQRES 26 A 512 GLN ASN PRO ASP VAL ASN ASN GLY ALA ILE ILE PHE HIS SEQRES 27 A 512 PRO SER PHE GLY TYR ASP GLY GLN ASP HIS GLU GLU LEU SEQRES 28 A 512 SER PHE ARG ALA MET CYS SER ASN MET ILE LEU ASN LEU SEQRES 29 A 512 PRO GLY GLU ALA HIS SER ALA GLU MET ILE ILE GLU ALA SEQRES 30 A 512 THR ARG LEU ALA THR MET PHE GLN VAL LYS ALA VAL PRO SEQRES 31 A 512 ALA GLY ASP THR SER LYS PRO VAL LEU TYR LEU PRO ASN SEQRES 32 A 512 GLY PHE GLY THR GLU VAL VAL ASN ASP TYR THR MET ILE SEQRES 33 A 512 SER VAL ASP LYS ALA THR PRO HIS ASP LEU THR ILE HIS SEQRES 34 A 512 THR PHE PHE ASN ASN ILE LEU VAL PRO ASN ALA LYS GLU SEQRES 35 A 512 ASN TYR VAL ALA ASN LEU GLU LEU LEU ASN ASN ILE ILE SEQRES 36 A 512 GLN PHE ASP TRP ALA PRO GLN LEU TYR LEU THR TYR GLY SEQRES 37 A 512 ILE ALA GLN GLU SER PHE GLY PRO PHE ALA GLN LEU ASN SEQRES 38 A 512 ASP TRP THR ILE LEU THR GLY GLU THR LEU ALA ARG MET SEQRES 39 A 512 HIS GLU VAL CYS VAL THR SER MET PHE ASP VAL PRO GLN SEQRES 40 A 512 MET GLY PHE ASN LYS SEQRES 1 B 512 GLU SER THR ARG ASN ASP VAL ALA TRP TYR ALA ARG TYR SEQRES 2 B 512 PRO HIS ILE LEU GLU GLU ALA THR ARG LEU PRO PHE ALA SEQRES 3 B 512 TYR PRO ILE GLY GLN TYR TYR ASP THR GLY TYR SER VAL SEQRES 4 B 512 ALA SER ALA THR GLU TRP SER LYS TYR VAL ASP THR SER SEQRES 5 B 512 LEU THR ILE PRO GLY VAL MET CYS VAL ASN PHE THR PRO SEQRES 6 B 512 THR PRO GLY GLU SER TYR ASN LYS ASN SER PRO ILE ASN SEQRES 7 B 512 ILE ALA ALA GLN ASN VAL TYR THR TYR VAL ARG HIS MET SEQRES 8 B 512 ASN SER GLY HIS ALA ASN TYR GLU GLN ALA ASP LEU MET SEQRES 9 B 512 MET TYR LEU LEU ALA MET ASP SER LEU TYR ILE PHE HIS SEQRES 10 B 512 SER TYR VAL ARG LYS ILE LEU ALA ILE SER LYS LEU TYR SEQRES 11 B 512 THR PRO VAL ASN LYS TYR PHE PRO ARG ALA LEU LEU VAL SEQRES 12 B 512 ALA LEU GLY VAL ASP PRO GLU ASP VAL PHE ALA ASN GLN SEQRES 13 B 512 ALA GLN TRP GLU TYR PHE VAL ASN MET VAL ALA TYR ARG SEQRES 14 B 512 ALA GLY ALA PHE ALA ALA PRO ALA SER MET THR TYR TYR SEQRES 15 B 512 GLU ARG HIS ALA TRP MET SER ASN GLY LEU TYR VAL ASP SEQRES 16 B 512 GLN ASP VAL THR ARG ALA GLN ILE TYR MET PHE LYS PRO SEQRES 17 B 512 THR MET LEU TRP LYS TYR GLU ASN LEU GLY THR THR GLY SEQRES 18 B 512 THR LYS LEU VAL PRO LEU MET MET PRO LYS ALA GLY ASP SEQRES 19 B 512 ASN ARG LYS LEU VAL ASP PHE GLN VAL LEU PHE ASN ASN SEQRES 20 B 512 LEU VAL SER THR MET LEU GLY ASP GLU ASP PHE GLY ILE SEQRES 21 B 512 MET SER GLY ASP VAL PHE LYS ALA PHE GLY ALA ASP GLY SEQRES 22 B 512 LEU VAL LYS LEU LEU ALA VAL ASP SER THR THR MET THR SEQRES 23 B 512 LEU PRO THR TYR ASP PRO LEU ILE LEU ALA GLN ILE HIS SEQRES 24 B 512 SER ALA ARG ALA VAL GLY ALA PRO ILE LEU GLU THR SER SEQRES 25 B 512 THR LEU THR GLY PHE PRO GLY ARG GLN TRP GLN ILE THR SEQRES 26 B 512 GLN ASN PRO ASP VAL ASN ASN GLY ALA ILE ILE PHE HIS SEQRES 27 B 512 PRO SER PHE GLY TYR ASP GLY GLN ASP HIS GLU GLU LEU SEQRES 28 B 512 SER PHE ARG ALA MET CYS SER ASN MET ILE LEU ASN LEU SEQRES 29 B 512 PRO GLY GLU ALA HIS SER ALA GLU MET ILE ILE GLU ALA SEQRES 30 B 512 THR ARG LEU ALA THR MET PHE GLN VAL LYS ALA VAL PRO SEQRES 31 B 512 ALA GLY ASP THR SER LYS PRO VAL LEU TYR LEU PRO ASN SEQRES 32 B 512 GLY PHE GLY THR GLU VAL VAL ASN ASP TYR THR MET ILE SEQRES 33 B 512 SER VAL ASP LYS ALA THR PRO HIS ASP LEU THR ILE HIS SEQRES 34 B 512 THR PHE PHE ASN ASN ILE LEU VAL PRO ASN ALA LYS GLU SEQRES 35 B 512 ASN TYR VAL ALA ASN LEU GLU LEU LEU ASN ASN ILE ILE SEQRES 36 B 512 GLN PHE ASP TRP ALA PRO GLN LEU TYR LEU THR TYR GLY SEQRES 37 B 512 ILE ALA GLN GLU SER PHE GLY PRO PHE ALA GLN LEU ASN SEQRES 38 B 512 ASP TRP THR ILE LEU THR GLY GLU THR LEU ALA ARG MET SEQRES 39 B 512 HIS GLU VAL CYS VAL THR SER MET PHE ASP VAL PRO GLN SEQRES 40 B 512 MET GLY PHE ASN LYS HELIX 1 1 TRP A 49 ARG A 52 1 4 HELIX 2 2 PRO A 54 ALA A 60 1 7 HELIX 3 3 ALA A 82 GLU A 84 1 3 HELIX 4 4 SER A 86 TYR A 88 1 3 HELIX 5 5 PRO A 116 ARG A 129 1 14 HELIX 6 6 GLN A 140 ILE A 166 1 27 HELIX 7 7 ARG A 179 ALA A 184 1 6 HELIX 8 8 GLU A 190 ALA A 194 1 5 HELIX 9 9 GLN A 196 ALA A 210 1 15 HELIX 10 10 TYR A 221 SER A 229 1 9 HELIX 11 11 LEU A 278 LEU A 288 1 11 HELIX 12 12 SER A 290 LEU A 293 1 4 HELIX 13 13 GLU A 296 PHE A 309 1 14 HELIX 14 14 ALA A 311 GLY A 313 1 3 HELIX 15 15 LEU A 333 HIS A 339 1 7 HELIX 16 16 PHE A 393 MET A 396 1 4 HELIX 17 17 ALA A 411 THR A 418 1 8 HELIX 18 18 ASN A 483 ILE A 495 1 13 HELIX 19 19 GLY A 528 SER A 541 1 14 HELIX 20 20 TRP B 49 ARG B 52 1 4 HELIX 21 21 PRO B 54 ALA B 60 1 7 HELIX 22 22 ALA B 82 GLU B 84 1 3 HELIX 23 23 SER B 86 TYR B 88 1 3 HELIX 24 24 PRO B 116 ARG B 129 1 14 HELIX 25 25 GLN B 140 ILE B 166 1 27 HELIX 26 26 ARG B 179 ALA B 184 1 6 HELIX 27 27 GLU B 190 ALA B 194 1 5 HELIX 28 28 GLN B 196 ALA B 210 1 15 HELIX 29 29 TYR B 221 SER B 229 1 9 HELIX 30 30 LEU B 278 LEU B 288 1 11 HELIX 31 31 SER B 290 LEU B 293 1 4 HELIX 32 32 GLU B 296 PHE B 309 1 14 HELIX 33 33 ALA B 311 GLY B 313 1 3 HELIX 34 34 LEU B 333 HIS B 339 1 7 HELIX 35 35 PHE B 393 MET B 396 1 4 HELIX 36 36 ALA B 411 THR B 418 1 8 HELIX 37 37 ASN B 483 ILE B 495 1 13 HELIX 38 38 GLY B 528 SER B 541 1 14 SHEET 1 1 1 VAL A 98 PRO A 105 0 SHEET 1 2 1 GLY A 231 VAL A 234 0 SHEET 1 3 1 ILE A 243 PRO A 248 0 SHEET 1 4 1 MET A 250 ASN A 256 0 SHEET 1 5 1 THR A 262 MET A 268 0 SHEET 1 6 1 GLN A 363 GLN A 366 0 SHEET 1 7 1 ILE A 375 HIS A 378 0 SHEET 1 8 1 MET A 400 LEU A 404 0 SHEET 1 9 1 GLN A 425 LYS A 427 0 SHEET 1 10 1 TYR A 440 PRO A 442 0 SHEET 1 11 1 GLU A 448 VAL A 458 0 SHEET 1 12 1 LEU A 466 PHE A 471 0 SHEET 1 13 1 ASN A 474 VAL A 477 0 SHEET 1 14 1 TYR A 504 TYR A 507 0 SHEET 1 15 1 GLU A 512 GLY A 515 0 SHEET 1 16 1 ASP A 522 LEU A 526 0 SHEET 1 17 1 VAL B 98 PRO B 105 0 SHEET 1 18 1 GLY B 231 VAL B 234 0 SHEET 1 19 1 ILE B 243 PRO B 248 0 SHEET 1 20 1 MET B 250 ASN B 256 0 SHEET 1 21 1 THR B 262 MET B 268 0 SHEET 1 22 1 GLN B 363 GLN B 366 0 SHEET 1 23 1 ILE B 375 HIS B 378 0 SHEET 1 24 1 MET B 400 LEU B 404 0 SHEET 1 25 1 GLN B 425 LYS B 427 0 SHEET 1 26 1 TYR B 440 PRO B 442 0 SHEET 1 27 1 GLU B 448 VAL B 458 0 SHEET 1 28 1 LEU B 466 PHE B 471 0 SHEET 1 29 1 ASN B 474 VAL B 477 0 SHEET 1 30 1 TYR B 504 TYR B 507 0 SHEET 1 31 1 GLU B 512 GLY B 515 0 SHEET 1 32 1 ASP B 522 LEU B 526 0 CISPEP 1 PHE A 177 PRO A 178 0 -2.44 CISPEP 2 THR A 462 PRO A 463 0 -7.02 CISPEP 3 PHE B 177 PRO B 178 0 -6.48 CISPEP 4 THR B 462 PRO B 463 0 2.68 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000