HEADER MEMBRANE PROTEIN 02-JUN-20 6Z8G TITLE CRYSTAL STRUCTURE OF VSG13 SOAKED IN 0.5 M USED TO PHASE VSG13 TO TITLE 2 SOLVE THE STRUCTURE. COMPND MOL_ID: 1; COMPND 2 MOLECULE: VARIANT SURFACE GLYCOPROTEIN MITAT 1.13; COMPND 3 CHAIN: A, B SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: TRYPANOSOMA BRUCEI; SOURCE 3 ORGANISM_TAXID: 5691 KEYWDS VARIANT SURFACE GLYCOPROTEIN, IMMUNE RECOGNITION, IMMUNE EVASION, KEYWDS 2 TRYPANOSOMIASIS, MEMBRANE PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR C.E.STEBBINS,A.HEMPELMANN,M.VAN STRAATEN,J.ZEELEN REVDAT 1 17-MAR-21 6Z8G 0 JRNL AUTH J.ZEELEN,M.VAN STRAATEN,J.VERDI,A.HEMPELMANN,H.HASHEMI, JRNL AUTH 2 K.PEREZ,P.D.JEFFREY,S.HALG,N.WIEDEMAR,P.MASER, JRNL AUTH 3 F.N.PAPAVASILIOU,C.E.STEBBINS JRNL TITL STRUCTURE OF TRYPANOSOME COAT PROTEIN VSGSUR AND FUNCTION IN JRNL TITL 2 SURAMIN RESISTANCE. JRNL REF NAT MICROBIOL V. 6 392 2021 JRNL REFN ESSN 2058-5276 JRNL PMID 33462435 JRNL DOI 10.1038/S41564-020-00844-1 REMARK 2 REMARK 2 RESOLUTION. 1.56 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.15.2_3472 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.56 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 52.55 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.7 REMARK 3 NUMBER OF REFLECTIONS : 109077 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.226 REMARK 3 R VALUE (WORKING SET) : 0.226 REMARK 3 FREE R VALUE : 0.233 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 1.850 REMARK 3 FREE R VALUE TEST SET COUNT : 3905 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 52.5500 - 4.7400 1.00 7740 136 0.1937 0.1989 REMARK 3 2 4.7400 - 3.7600 1.00 7703 166 0.1590 0.1605 REMARK 3 3 3.7600 - 3.2800 1.00 7727 159 0.1809 0.1701 REMARK 3 4 3.2800 - 2.9800 1.00 7648 144 0.2049 0.2119 REMARK 3 5 2.9800 - 2.7700 1.00 7771 153 0.2266 0.2392 REMARK 3 6 2.7700 - 2.6100 1.00 7763 130 0.2257 0.2303 REMARK 3 7 2.6100 - 2.4800 1.00 7759 144 0.2319 0.2479 REMARK 3 8 2.4800 - 2.3700 1.00 7678 167 0.2261 0.2414 REMARK 3 9 2.3700 - 2.2800 1.00 7676 143 0.2355 0.3006 REMARK 3 10 2.2800 - 2.2000 1.00 7715 130 0.2384 0.2988 REMARK 3 11 2.2000 - 2.1300 1.00 7830 137 0.2407 0.2666 REMARK 3 12 2.1300 - 2.0700 1.00 7734 145 0.2501 0.2430 REMARK 3 13 2.0700 - 2.0100 1.00 7618 149 0.2557 0.3232 REMARK 3 14 2.0100 - 1.9700 1.00 7875 119 0.2548 0.2876 REMARK 3 15 1.9700 - 1.9200 1.00 7698 161 0.2585 0.2464 REMARK 3 16 1.9200 - 1.8800 1.00 7659 146 0.2725 0.2488 REMARK 3 17 1.8800 - 1.8400 1.00 7781 139 0.2781 0.2736 REMARK 3 18 1.8400 - 1.8100 1.00 7569 142 0.2880 0.2575 REMARK 3 19 1.8100 - 1.7800 1.00 7867 131 0.2963 0.2521 REMARK 3 20 1.7800 - 1.7500 1.00 7590 164 0.3095 0.3024 REMARK 3 21 1.7500 - 1.7200 1.00 7761 140 0.3054 0.2822 REMARK 3 22 1.7200 - 1.6900 1.00 7687 129 0.3098 0.3399 REMARK 3 23 1.6900 - 1.6700 0.98 7645 145 0.3290 0.3079 REMARK 3 24 1.6700 - 1.6400 0.92 7138 124 0.3360 0.3320 REMARK 3 25 1.6400 - 1.6200 0.84 6347 141 0.3427 0.3700 REMARK 3 26 1.6200 - 1.6000 0.76 5998 128 0.3604 0.3613 REMARK 3 27 1.6000 - 1.5800 0.68 5136 106 0.3768 0.3437 REMARK 3 28 1.5800 - 1.5600 0.64 5067 87 0.3928 0.3981 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.178 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 29.680 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 19.34 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 32.92 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 28 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 28:45) REMARK 3 ORIGIN FOR THE GROUP (A): 31.0539 46.7095 53.8033 REMARK 3 T TENSOR REMARK 3 T11: 0.5537 T22: 0.3709 REMARK 3 T33: 0.3740 T12: -0.2194 REMARK 3 T13: 0.1315 T23: -0.0719 REMARK 3 L TENSOR REMARK 3 L11: 0.0067 L22: 0.1019 REMARK 3 L33: 0.2502 L12: 0.0108 REMARK 3 L13: 0.0232 L23: 0.1560 REMARK 3 S TENSOR REMARK 3 S11: -0.1953 S12: -0.0654 S13: -0.2248 REMARK 3 S21: 0.1152 S22: -0.1103 S23: 0.2137 REMARK 3 S31: 0.7037 S32: -0.5246 S33: 0.1250 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 46:80) REMARK 3 ORIGIN FOR THE GROUP (A): 54.6330 52.1910 28.1601 REMARK 3 T TENSOR REMARK 3 T11: 0.3343 T22: 0.1587 REMARK 3 T33: 0.2550 T12: -0.0369 REMARK 3 T13: 0.0061 T23: -0.0125 REMARK 3 L TENSOR REMARK 3 L11: 2.0883 L22: 0.3703 REMARK 3 L33: 2.7603 L12: -0.0080 REMARK 3 L13: -1.9166 L23: 0.1170 REMARK 3 S TENSOR REMARK 3 S11: -0.2063 S12: -0.1416 S13: -0.2158 REMARK 3 S21: 0.1264 S22: -0.0273 S23: -0.0618 REMARK 3 S31: 0.3327 S32: 0.0411 S33: 0.1485 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 81:111) REMARK 3 ORIGIN FOR THE GROUP (A): 48.0513 53.5506 23.6701 REMARK 3 T TENSOR REMARK 3 T11: 0.2812 T22: 0.1661 REMARK 3 T33: 0.2264 T12: -0.0778 REMARK 3 T13: 0.0063 T23: -0.0324 REMARK 3 L TENSOR REMARK 3 L11: 1.7078 L22: 0.4768 REMARK 3 L33: 2.5195 L12: -0.4877 REMARK 3 L13: -1.6381 L23: 0.5012 REMARK 3 S TENSOR REMARK 3 S11: 0.0242 S12: 0.0968 S13: -0.0482 REMARK 3 S21: -0.0248 S22: -0.0931 S23: -0.0177 REMARK 3 S31: 0.1568 S32: -0.2509 S33: 0.1286 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN A AND RESID 112:152) REMARK 3 ORIGIN FOR THE GROUP (A): 23.6167 59.0101 73.9808 REMARK 3 T TENSOR REMARK 3 T11: 0.2266 T22: 0.4165 REMARK 3 T33: 0.2338 T12: -0.0980 REMARK 3 T13: -0.0077 T23: -0.0511 REMARK 3 L TENSOR REMARK 3 L11: 0.5649 L22: 0.6017 REMARK 3 L33: 2.7595 L12: -0.0629 REMARK 3 L13: -0.8731 L23: 0.5769 REMARK 3 S TENSOR REMARK 3 S11: -0.2731 S12: 0.0188 S13: -0.1639 REMARK 3 S21: 0.1217 S22: -0.0911 S23: 0.0308 REMARK 3 S31: 0.6345 S32: -0.4409 S33: 0.2033 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN A AND RESID 153:166) REMARK 3 ORIGIN FOR THE GROUP (A): 29.5126 55.8513 75.1999 REMARK 3 T TENSOR REMARK 3 T11: 0.3309 T22: 0.3560 REMARK 3 T33: 0.2349 T12: -0.0712 REMARK 3 T13: 0.0491 T23: -0.0243 REMARK 3 L TENSOR REMARK 3 L11: 1.9772 L22: 1.0363 REMARK 3 L33: 2.4589 L12: -0.5033 REMARK 3 L13: -1.0420 L23: 0.4549 REMARK 3 S TENSOR REMARK 3 S11: -0.1665 S12: -0.1687 S13: -0.0873 REMARK 3 S21: 0.1285 S22: -0.0764 S23: 0.1089 REMARK 3 S31: 0.5775 S32: -0.2531 S33: 0.2244 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN A AND RESID 167:179) REMARK 3 ORIGIN FOR THE GROUP (A): 35.6214 41.2564 54.2000 REMARK 3 T TENSOR REMARK 3 T11: 0.8106 T22: 0.5189 REMARK 3 T33: 0.4267 T12: -0.1001 REMARK 3 T13: 0.1364 T23: 0.0185 REMARK 3 L TENSOR REMARK 3 L11: 0.0096 L22: 0.4096 REMARK 3 L33: 1.5958 L12: -0.0625 REMARK 3 L13: -0.1232 L23: 0.8003 REMARK 3 S TENSOR REMARK 3 S11: -0.1326 S12: -0.1785 S13: -0.1335 REMARK 3 S21: 0.2667 S22: -0.0098 S23: -0.0106 REMARK 3 S31: 0.6915 S32: -0.2511 S33: 0.1794 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: (CHAIN A AND RESID 180:187) REMARK 3 ORIGIN FOR THE GROUP (A): 28.0243 42.2079 43.6644 REMARK 3 T TENSOR REMARK 3 T11: 1.0049 T22: 0.5718 REMARK 3 T33: 0.4992 T12: -0.3403 REMARK 3 T13: 0.1779 T23: -0.1167 REMARK 3 L TENSOR REMARK 3 L11: 1.4087 L22: 1.7251 REMARK 3 L33: 3.9134 L12: 0.4498 REMARK 3 L13: -1.3119 L23: 1.1086 REMARK 3 S TENSOR REMARK 3 S11: -0.1463 S12: 0.2835 S13: -0.3539 REMARK 3 S21: -0.0756 S22: -0.1252 S23: 0.1425 REMARK 3 S31: 0.5355 S32: -0.4551 S33: 0.2603 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: (CHAIN A AND RESID 188:205) REMARK 3 ORIGIN FOR THE GROUP (A): 15.3763 52.5908 70.6194 REMARK 3 T TENSOR REMARK 3 T11: 0.4212 T22: 0.6861 REMARK 3 T33: 0.3013 T12: -0.3282 REMARK 3 T13: 0.0764 T23: -0.1546 REMARK 3 L TENSOR REMARK 3 L11: 0.2983 L22: 0.5591 REMARK 3 L33: 0.8294 L12: -0.2060 REMARK 3 L13: -0.0655 L23: 0.6125 REMARK 3 S TENSOR REMARK 3 S11: -0.0333 S12: -0.1795 S13: 0.0009 REMARK 3 S21: 0.2481 S22: -0.1683 S23: 0.2224 REMARK 3 S31: 0.2761 S32: -0.4749 S33: 0.0983 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: (CHAIN A AND RESID 206:217) REMARK 3 ORIGIN FOR THE GROUP (A): 5.4695 52.8621 91.5412 REMARK 3 T TENSOR REMARK 3 T11: 0.8209 T22: 0.9286 REMARK 3 T33: 0.5166 T12: -0.4097 REMARK 3 T13: 0.3120 T23: -0.1227 REMARK 3 L TENSOR REMARK 3 L11: 0.0157 L22: 0.7721 REMARK 3 L33: 0.2512 L12: 0.1097 REMARK 3 L13: 0.0621 L23: 0.4391 REMARK 3 S TENSOR REMARK 3 S11: -0.0924 S12: -0.0323 S13: -0.1575 REMARK 3 S21: 0.0849 S22: -0.0563 S23: 0.2334 REMARK 3 S31: 0.4101 S32: -0.4811 S33: 0.0958 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: (CHAIN A AND RESID 218:280) REMARK 3 ORIGIN FOR THE GROUP (A): 17.9042 52.3253 63.0978 REMARK 3 T TENSOR REMARK 3 T11: 0.3409 T22: 0.5773 REMARK 3 T33: 0.3221 T12: -0.2658 REMARK 3 T13: 0.0571 T23: -0.1142 REMARK 3 L TENSOR REMARK 3 L11: 0.3402 L22: 0.4482 REMARK 3 L33: 0.5304 L12: 0.1222 REMARK 3 L13: -0.2695 L23: -0.0498 REMARK 3 S TENSOR REMARK 3 S11: -0.1340 S12: 0.0931 S13: -0.1865 REMARK 3 S21: 0.1265 S22: -0.1667 S23: 0.1703 REMARK 3 S31: 0.3989 S32: -0.5752 S33: 0.1483 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: (CHAIN A AND RESID 281:298) REMARK 3 ORIGIN FOR THE GROUP (A): 51.2161 43.3118 18.7170 REMARK 3 T TENSOR REMARK 3 T11: 0.4521 T22: 0.2097 REMARK 3 T33: 0.2738 T12: -0.0864 REMARK 3 T13: 0.0230 T23: -0.0202 REMARK 3 L TENSOR REMARK 3 L11: 0.0151 L22: 0.3300 REMARK 3 L33: 1.2472 L12: -0.0688 REMARK 3 L13: -0.1134 L23: 0.6308 REMARK 3 S TENSOR REMARK 3 S11: -0.0496 S12: -0.0383 S13: -0.1092 REMARK 3 S21: -0.0798 S22: -0.1568 S23: 0.1068 REMARK 3 S31: 0.5135 S32: -0.2347 S33: 0.1524 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: (CHAIN A AND RESID 299:334) REMARK 3 ORIGIN FOR THE GROUP (A): 56.5732 39.3583 7.3976 REMARK 3 T TENSOR REMARK 3 T11: 0.6022 T22: 0.1024 REMARK 3 T33: 0.3070 T12: -0.0664 REMARK 3 T13: 0.0561 T23: -0.0556 REMARK 3 L TENSOR REMARK 3 L11: 1.2076 L22: 1.4289 REMARK 3 L33: 0.7159 L12: -0.3272 REMARK 3 L13: -0.7389 L23: 0.4282 REMARK 3 S TENSOR REMARK 3 S11: -0.0127 S12: 0.3225 S13: -0.2617 REMARK 3 S21: -0.1316 S22: -0.0573 S23: -0.0847 REMARK 3 S31: 0.5050 S32: -0.2574 S33: -0.0049 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: (CHAIN A AND RESID 335:379) REMARK 3 ORIGIN FOR THE GROUP (A): 69.7191 55.9162 23.6112 REMARK 3 T TENSOR REMARK 3 T11: 0.2130 T22: 0.1571 REMARK 3 T33: 0.2906 T12: 0.0127 REMARK 3 T13: -0.0309 T23: -0.0093 REMARK 3 L TENSOR REMARK 3 L11: 0.7447 L22: 1.1058 REMARK 3 L33: 1.5332 L12: 0.2175 REMARK 3 L13: -0.3935 L23: 0.0907 REMARK 3 S TENSOR REMARK 3 S11: -0.0026 S12: -0.1948 S13: -0.1298 REMARK 3 S21: 0.0854 S22: -0.0169 S23: -0.3534 REMARK 3 S31: 0.3397 S32: 0.2258 S33: 0.0329 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: (CHAIN A AND RESID 380:384) REMARK 3 ORIGIN FOR THE GROUP (A): 71.8477 66.4364 9.9487 REMARK 3 T TENSOR REMARK 3 T11: 0.3861 T22: 0.4125 REMARK 3 T33: 0.4554 T12: -0.0498 REMARK 3 T13: 0.1151 T23: -0.1120 REMARK 3 L TENSOR REMARK 3 L11: 2.4877 L22: 4.2011 REMARK 3 L33: 6.0068 L12: -1.3563 REMARK 3 L13: -2.5340 L23: 0.9214 REMARK 3 S TENSOR REMARK 3 S11: 0.0232 S12: 0.1185 S13: -0.2188 REMARK 3 S21: -0.3002 S22: 0.0289 S23: -0.0641 REMARK 3 S31: 0.2042 S32: 0.1830 S33: -0.0620 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: (CHAIN B AND RESID 28:65) REMARK 3 ORIGIN FOR THE GROUP (A): 39.8044 72.1493 43.1910 REMARK 3 T TENSOR REMARK 3 T11: 0.1842 T22: 0.2474 REMARK 3 T33: 0.2434 T12: -0.0270 REMARK 3 T13: -0.0346 T23: -0.0126 REMARK 3 L TENSOR REMARK 3 L11: 0.9561 L22: 0.3809 REMARK 3 L33: 2.0629 L12: -0.2898 REMARK 3 L13: -1.0623 L23: 0.3639 REMARK 3 S TENSOR REMARK 3 S11: 0.1218 S12: 0.0757 S13: 0.1027 REMARK 3 S21: -0.0035 S22: -0.0126 S23: 0.0510 REMARK 3 S31: -0.2436 S32: -0.3930 S33: 0.0379 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: (CHAIN B AND RESID 66:79) REMARK 3 ORIGIN FOR THE GROUP (A): 58.3869 66.9143 12.4592 REMARK 3 T TENSOR REMARK 3 T11: 0.2417 T22: 0.1431 REMARK 3 T33: 0.2200 T12: -0.0571 REMARK 3 T13: -0.0339 T23: -0.0065 REMARK 3 L TENSOR REMARK 3 L11: 1.3573 L22: 1.7740 REMARK 3 L33: 4.1910 L12: -0.1416 REMARK 3 L13: -0.5325 L23: -0.2337 REMARK 3 S TENSOR REMARK 3 S11: 0.0666 S12: 0.1160 S13: -0.0508 REMARK 3 S21: -0.2795 S22: 0.0867 S23: -0.1866 REMARK 3 S31: -0.1353 S32: 0.1910 S33: 0.0310 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: (CHAIN B AND RESID 80:103) REMARK 3 ORIGIN FOR THE GROUP (A): 59.5599 69.1979 24.2586 REMARK 3 T TENSOR REMARK 3 T11: 0.1912 T22: 0.1470 REMARK 3 T33: 0.2264 T12: -0.0422 REMARK 3 T13: -0.0263 T23: -0.0237 REMARK 3 L TENSOR REMARK 3 L11: 0.9673 L22: 0.6972 REMARK 3 L33: 3.2622 L12: 0.1803 REMARK 3 L13: -1.0437 L23: -0.3453 REMARK 3 S TENSOR REMARK 3 S11: -0.0187 S12: -0.0621 S13: 0.0018 REMARK 3 S21: -0.1720 S22: 0.0320 S23: -0.0705 REMARK 3 S31: -0.0167 S32: 0.0623 S33: 0.0227 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: (CHAIN B AND RESID 104:129) REMARK 3 ORIGIN FOR THE GROUP (A): 36.4192 64.2948 52.7666 REMARK 3 T TENSOR REMARK 3 T11: 0.1445 T22: 0.2673 REMARK 3 T33: 0.1956 T12: -0.0590 REMARK 3 T13: -0.0319 T23: -0.0252 REMARK 3 L TENSOR REMARK 3 L11: 1.6724 L22: 0.4090 REMARK 3 L33: 1.3393 L12: 0.0192 REMARK 3 L13: -0.9607 L23: -0.0931 REMARK 3 S TENSOR REMARK 3 S11: -0.1342 S12: -0.0047 S13: -0.1029 REMARK 3 S21: -0.0819 S22: -0.0148 S23: 0.0457 REMARK 3 S31: 0.1709 S32: -0.2446 S33: 0.0815 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: (CHAIN B AND RESID 130:135) REMARK 3 ORIGIN FOR THE GROUP (A): 16.6477 67.1508 69.8643 REMARK 3 T TENSOR REMARK 3 T11: 0.1280 T22: 0.6350 REMARK 3 T33: 0.2723 T12: 0.0180 REMARK 3 T13: -0.0201 T23: -0.0201 REMARK 3 L TENSOR REMARK 3 L11: 3.7513 L22: 1.3888 REMARK 3 L33: 2.7579 L12: 0.5364 REMARK 3 L13: -0.7714 L23: -0.5544 REMARK 3 S TENSOR REMARK 3 S11: 0.0963 S12: -0.0468 S13: 0.1787 REMARK 3 S21: 0.1198 S22: 0.0237 S23: 0.1520 REMARK 3 S31: -0.0440 S32: -0.4948 S33: -0.0038 REMARK 3 TLS GROUP : 20 REMARK 3 SELECTION: (CHAIN B AND RESID 136:149) REMARK 3 ORIGIN FOR THE GROUP (A): 2.5755 61.0165 83.6307 REMARK 3 T TENSOR REMARK 3 T11: 0.1091 T22: 1.2027 REMARK 3 T33: 0.4440 T12: -0.4225 REMARK 3 T13: 0.1056 T23: -0.2895 REMARK 3 L TENSOR REMARK 3 L11: 0.9636 L22: 0.4227 REMARK 3 L33: 1.2669 L12: 0.4103 REMARK 3 L13: -0.4316 L23: -0.4116 REMARK 3 S TENSOR REMARK 3 S11: -0.0573 S12: -0.0123 S13: -0.0152 REMARK 3 S21: 0.1312 S22: -0.1788 S23: 0.2200 REMARK 3 S31: 0.1598 S32: -0.5165 S33: -0.0657 REMARK 3 TLS GROUP : 21 REMARK 3 SELECTION: (CHAIN B AND RESID 150:172) REMARK 3 ORIGIN FOR THE GROUP (A): 13.8639 67.0165 64.5200 REMARK 3 T TENSOR REMARK 3 T11: 0.1080 T22: 0.7442 REMARK 3 T33: 0.2925 T12: -0.0522 REMARK 3 T13: -0.0485 T23: -0.0933 REMARK 3 L TENSOR REMARK 3 L11: 1.2641 L22: 0.8168 REMARK 3 L33: 0.7475 L12: 0.3662 REMARK 3 L13: 0.4567 L23: 0.0579 REMARK 3 S TENSOR REMARK 3 S11: 0.0253 S12: -0.1285 S13: 0.1496 REMARK 3 S21: 0.0004 S22: -0.1832 S23: 0.2180 REMARK 3 S31: 0.0324 S32: -0.4192 S33: -0.1328 REMARK 3 TLS GROUP : 22 REMARK 3 SELECTION: (CHAIN B AND RESID 175:190) REMARK 3 ORIGIN FOR THE GROUP (A): 41.1587 78.4676 55.1837 REMARK 3 T TENSOR REMARK 3 T11: 0.3136 T22: 0.3031 REMARK 3 T33: 0.3205 T12: -0.0324 REMARK 3 T13: 0.0075 T23: -0.0484 REMARK 3 L TENSOR REMARK 3 L11: 0.8635 L22: 0.7988 REMARK 3 L33: 3.7019 L12: 0.6599 REMARK 3 L13: -1.6247 L23: -0.8138 REMARK 3 S TENSOR REMARK 3 S11: 0.0491 S12: -0.1127 S13: 0.0466 REMARK 3 S21: -0.0599 S22: 0.0393 S23: -0.1392 REMARK 3 S31: -0.3360 S32: -0.0257 S33: 0.0012 REMARK 3 TLS GROUP : 23 REMARK 3 SELECTION: (CHAIN B AND RESID 191:217) REMARK 3 ORIGIN FOR THE GROUP (A): 13.9877 70.7535 84.9150 REMARK 3 T TENSOR REMARK 3 T11: 0.0560 T22: 0.7792 REMARK 3 T33: 0.2744 T12: 0.0244 REMARK 3 T13: -0.0285 T23: -0.0950 REMARK 3 L TENSOR REMARK 3 L11: 1.5067 L22: 0.3259 REMARK 3 L33: 1.4494 L12: -0.0789 REMARK 3 L13: -0.6711 L23: 0.1548 REMARK 3 S TENSOR REMARK 3 S11: -0.0180 S12: -0.2711 S13: 0.1138 REMARK 3 S21: 0.2987 S22: -0.0328 S23: 0.2468 REMARK 3 S31: -0.1340 S32: -0.7001 S33: 0.0082 REMARK 3 TLS GROUP : 24 REMARK 3 SELECTION: (CHAIN B AND RESID 218:296) REMARK 3 ORIGIN FOR THE GROUP (A): 35.6849 71.5202 61.3193 REMARK 3 T TENSOR REMARK 3 T11: 0.1155 T22: 0.2877 REMARK 3 T33: 0.1920 T12: -0.0077 REMARK 3 T13: -0.0547 T23: -0.0265 REMARK 3 L TENSOR REMARK 3 L11: -0.0880 L22: 0.2369 REMARK 3 L33: 0.9950 L12: -0.1007 REMARK 3 L13: -0.0983 L23: 0.0984 REMARK 3 S TENSOR REMARK 3 S11: -0.0170 S12: 0.0181 S13: 0.0094 REMARK 3 S21: 0.0075 S22: 0.0149 S23: 0.0257 REMARK 3 S31: -0.1275 S32: -0.2977 S33: 0.0103 REMARK 3 TLS GROUP : 25 REMARK 3 SELECTION: (CHAIN B AND RESID 297:318) REMARK 3 ORIGIN FOR THE GROUP (A): 74.3588 77.0197 18.9116 REMARK 3 T TENSOR REMARK 3 T11: 0.2446 T22: 0.2125 REMARK 3 T33: 0.3597 T12: -0.0574 REMARK 3 T13: 0.0126 T23: -0.0410 REMARK 3 L TENSOR REMARK 3 L11: 0.9668 L22: 1.4505 REMARK 3 L33: 1.2725 L12: -0.3637 REMARK 3 L13: -0.4189 L23: 0.0517 REMARK 3 S TENSOR REMARK 3 S11: 0.0801 S12: -0.0204 S13: 0.0203 REMARK 3 S21: -0.4518 S22: -0.1370 S23: -0.2226 REMARK 3 S31: -0.1481 S32: 0.3296 S33: -0.0914 REMARK 3 TLS GROUP : 26 REMARK 3 SELECTION: (CHAIN B AND RESID 319:338) REMARK 3 ORIGIN FOR THE GROUP (A): 60.9495 84.8055 16.3934 REMARK 3 T TENSOR REMARK 3 T11: 0.3671 T22: 0.1139 REMARK 3 T33: 0.2977 T12: -0.0515 REMARK 3 T13: -0.0224 T23: -0.0100 REMARK 3 L TENSOR REMARK 3 L11: 2.6007 L22: 0.7832 REMARK 3 L33: 1.1095 L12: 0.2529 REMARK 3 L13: -0.6137 L23: -0.2150 REMARK 3 S TENSOR REMARK 3 S11: 0.0658 S12: -0.0117 S13: 0.5309 REMARK 3 S21: -0.1108 S22: 0.0450 S23: 0.0516 REMARK 3 S31: -0.4765 S32: 0.1659 S33: -0.0627 REMARK 3 TLS GROUP : 27 REMARK 3 SELECTION: (CHAIN B AND RESID 339:378) REMARK 3 ORIGIN FOR THE GROUP (A): 50.1370 62.7454 8.1125 REMARK 3 T TENSOR REMARK 3 T11: 0.2567 T22: 0.1997 REMARK 3 T33: 0.2417 T12: -0.0617 REMARK 3 T13: -0.0394 T23: -0.0210 REMARK 3 L TENSOR REMARK 3 L11: 0.7884 L22: 1.2964 REMARK 3 L33: 1.8269 L12: -0.1826 REMARK 3 L13: -0.3846 L23: 0.3348 REMARK 3 S TENSOR REMARK 3 S11: -0.0784 S12: 0.1872 S13: -0.0461 REMARK 3 S21: -0.2478 S22: -0.0911 S23: 0.2228 REMARK 3 S31: 0.1613 S32: -0.3316 S33: 0.0824 REMARK 3 TLS GROUP : 28 REMARK 3 SELECTION: (CHAIN B AND RESID 379:384) REMARK 3 ORIGIN FOR THE GROUP (A): 63.3143 53.5508 4.3126 REMARK 3 T TENSOR REMARK 3 T11: 0.3955 T22: 0.1934 REMARK 3 T33: 0.3448 T12: -0.0276 REMARK 3 T13: 0.0865 T23: 0.0278 REMARK 3 L TENSOR REMARK 3 L11: 1.1711 L22: 1.6243 REMARK 3 L33: 2.4433 L12: 0.5679 REMARK 3 L13: -0.3527 L23: 0.2820 REMARK 3 S TENSOR REMARK 3 S11: -0.0821 S12: 0.1581 S13: -0.1010 REMARK 3 S21: -0.2705 S22: -0.0247 S23: -0.2561 REMARK 3 S31: 0.2952 S32: 0.2109 S33: 0.0542 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6Z8G COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 02-JUN-20. REMARK 100 THE DEPOSITION ID IS D_1292109068. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-APR-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9198 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 XE 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 109295 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.560 REMARK 200 RESOLUTION RANGE LOW (A) : 52.550 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.2 REMARK 200 DATA REDUNDANCY : 4.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 18.7700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.56 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.62 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXDE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): NULL REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): NULL REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PURIFIED METHYLATED VSG13 N-TERMINAL REMARK 280 DOMAIN WAS CONCENTRATED TO 2.5 MG/ML IN 10MM TRIS.CL PH 8.0. REMARK 280 CRYSTALS WERE GROWN AT 23C BY VAPOUR DIFFUSION USING HANGING REMARK 280 DROPS FORMED FROM MIXING A 1:1 VOLUME RATIO OF THE PROTEIN WITH REMARK 280 AN EQUILIBRATION BUFFER CONSISTING OF 1.8-2.0M (NH4)2SO4, 100MM REMARK 280 TRIS.CL PH 8.5., VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 296.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 37.07400 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 34.20350 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 37.07400 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 34.20350 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 14720 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 28540 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -48.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLN A 2 REMARK 465 ARG A 3 REMARK 465 LEU A 4 REMARK 465 GLY A 5 REMARK 465 THR A 6 REMARK 465 ALA A 7 REMARK 465 VAL A 8 REMARK 465 PHE A 9 REMARK 465 PHE A 10 REMARK 465 LEU A 11 REMARK 465 LEU A 12 REMARK 465 ALA A 13 REMARK 465 PHE A 14 REMARK 465 ARG A 15 REMARK 465 TYR A 16 REMARK 465 SER A 17 REMARK 465 THR A 18 REMARK 465 GLU A 19 REMARK 465 GLN A 20 REMARK 465 ALA A 21 REMARK 465 VAL A 22 REMARK 465 GLY A 23 REMARK 465 LEU A 24 REMARK 465 LYS A 25 REMARK 465 GLU A 26 REMARK 465 PRO A 27 REMARK 465 PRO A 170 REMARK 465 GLY A 171 REMARK 465 THR A 173 REMARK 465 ASN A 174 REMARK 465 VAL A 175 REMARK 465 VAL A 205 REMARK 465 GLY A 206 REMARK 465 GLN A 207 REMARK 465 SER A 208 REMARK 465 HIS A 212 REMARK 465 THR A 213 REMARK 465 LYS A 385 REMARK 465 GLN A 386 REMARK 465 GLU A 387 REMARK 465 GLU A 388 REMARK 465 GLN A 389 REMARK 465 SER A 390 REMARK 465 ILE A 391 REMARK 465 LYS A 392 REMARK 465 THR A 393 REMARK 465 SER A 394 REMARK 465 SER A 395 REMARK 465 ASP A 396 REMARK 465 GLU A 397 REMARK 465 ALA A 398 REMARK 465 THR A 399 REMARK 465 ASN A 400 REMARK 465 LYS A 401 REMARK 465 GLU A 402 REMARK 465 CYS A 403 REMARK 465 ASP A 404 REMARK 465 LYS A 405 REMARK 465 HIS A 406 REMARK 465 THR A 407 REMARK 465 ALA A 408 REMARK 465 LYS A 409 REMARK 465 THR A 410 REMARK 465 GLU A 411 REMARK 465 GLY A 412 REMARK 465 GLU A 413 REMARK 465 CYS A 414 REMARK 465 THR A 415 REMARK 465 LYS A 416 REMARK 465 LEU A 417 REMARK 465 GLY A 418 REMARK 465 CYS A 419 REMARK 465 ASP A 420 REMARK 465 TYR A 421 REMARK 465 ASP A 422 REMARK 465 ALA A 423 REMARK 465 GLU A 424 REMARK 465 ASN A 425 REMARK 465 LYS A 426 REMARK 465 LYS A 427 REMARK 465 CYS A 428 REMARK 465 LYS A 429 REMARK 465 PRO A 430 REMARK 465 LYS A 431 REMARK 465 SER A 432 REMARK 465 GLU A 433 REMARK 465 LYS A 434 REMARK 465 GLU A 435 REMARK 465 THR A 436 REMARK 465 THR A 437 REMARK 465 ALA A 438 REMARK 465 ALA A 439 REMARK 465 GLY A 440 REMARK 465 LYS A 441 REMARK 465 LYS A 442 REMARK 465 ASP A 443 REMARK 465 ARG A 444 REMARK 465 ALA A 445 REMARK 465 ALA A 446 REMARK 465 GLY A 447 REMARK 465 GLU A 448 REMARK 465 THR A 449 REMARK 465 GLY A 450 REMARK 465 CYS A 451 REMARK 465 ALA A 452 REMARK 465 LYS A 453 REMARK 465 HIS A 454 REMARK 465 GLY A 455 REMARK 465 THR A 456 REMARK 465 ASP A 457 REMARK 465 LYS A 458 REMARK 465 ASP A 459 REMARK 465 LYS A 460 REMARK 465 CYS A 461 REMARK 465 GLU A 462 REMARK 465 ASN A 463 REMARK 465 ASP A 464 REMARK 465 LYS A 465 REMARK 465 SER A 466 REMARK 465 CYS A 467 REMARK 465 LYS A 468 REMARK 465 TRP A 469 REMARK 465 GLU A 470 REMARK 465 ASN A 471 REMARK 465 ASN A 472 REMARK 465 ALA A 473 REMARK 465 CYS A 474 REMARK 465 LYS A 475 REMARK 465 ASP A 476 REMARK 465 SER A 477 REMARK 465 SER A 478 REMARK 465 ILE A 479 REMARK 465 LEU A 480 REMARK 465 ALA A 481 REMARK 465 THR A 482 REMARK 465 LYS A 483 REMARK 465 LYS A 484 REMARK 465 PHE A 485 REMARK 465 ALA A 486 REMARK 465 LEU A 487 REMARK 465 SER A 488 REMARK 465 MET A 489 REMARK 465 VAL A 490 REMARK 465 SER A 491 REMARK 465 ALA A 492 REMARK 465 ALA A 493 REMARK 465 PHE A 494 REMARK 465 VAL A 495 REMARK 465 THR A 496 REMARK 465 LEU A 497 REMARK 465 LEU A 498 REMARK 465 PHE A 499 REMARK 465 MET B 1 REMARK 465 GLN B 2 REMARK 465 ARG B 3 REMARK 465 LEU B 4 REMARK 465 GLY B 5 REMARK 465 THR B 6 REMARK 465 ALA B 7 REMARK 465 VAL B 8 REMARK 465 PHE B 9 REMARK 465 PHE B 10 REMARK 465 LEU B 11 REMARK 465 LEU B 12 REMARK 465 ALA B 13 REMARK 465 PHE B 14 REMARK 465 ARG B 15 REMARK 465 TYR B 16 REMARK 465 SER B 17 REMARK 465 THR B 18 REMARK 465 GLU B 19 REMARK 465 GLN B 20 REMARK 465 ALA B 21 REMARK 465 VAL B 22 REMARK 465 GLY B 23 REMARK 465 LEU B 24 REMARK 465 LYS B 25 REMARK 465 GLU B 26 REMARK 465 PRO B 27 REMARK 465 GLY B 141 REMARK 465 GLY B 142 REMARK 465 ALA B 168 REMARK 465 ASP B 169 REMARK 465 PRO B 170 REMARK 465 GLY B 171 REMARK 465 THR B 173 REMARK 465 ASN B 174 REMARK 465 LYS B 385 REMARK 465 GLN B 386 REMARK 465 GLU B 387 REMARK 465 GLU B 388 REMARK 465 GLN B 389 REMARK 465 SER B 390 REMARK 465 ILE B 391 REMARK 465 LYS B 392 REMARK 465 THR B 393 REMARK 465 SER B 394 REMARK 465 SER B 395 REMARK 465 ASP B 396 REMARK 465 GLU B 397 REMARK 465 ALA B 398 REMARK 465 THR B 399 REMARK 465 ASN B 400 REMARK 465 LYS B 401 REMARK 465 GLU B 402 REMARK 465 CYS B 403 REMARK 465 ASP B 404 REMARK 465 LYS B 405 REMARK 465 HIS B 406 REMARK 465 THR B 407 REMARK 465 ALA B 408 REMARK 465 LYS B 409 REMARK 465 THR B 410 REMARK 465 GLU B 411 REMARK 465 GLY B 412 REMARK 465 GLU B 413 REMARK 465 CYS B 414 REMARK 465 THR B 415 REMARK 465 LYS B 416 REMARK 465 LEU B 417 REMARK 465 GLY B 418 REMARK 465 CYS B 419 REMARK 465 ASP B 420 REMARK 465 TYR B 421 REMARK 465 ASP B 422 REMARK 465 ALA B 423 REMARK 465 GLU B 424 REMARK 465 ASN B 425 REMARK 465 LYS B 426 REMARK 465 LYS B 427 REMARK 465 CYS B 428 REMARK 465 LYS B 429 REMARK 465 PRO B 430 REMARK 465 LYS B 431 REMARK 465 SER B 432 REMARK 465 GLU B 433 REMARK 465 LYS B 434 REMARK 465 GLU B 435 REMARK 465 THR B 436 REMARK 465 THR B 437 REMARK 465 ALA B 438 REMARK 465 ALA B 439 REMARK 465 GLY B 440 REMARK 465 LYS B 441 REMARK 465 LYS B 442 REMARK 465 ASP B 443 REMARK 465 ARG B 444 REMARK 465 ALA B 445 REMARK 465 ALA B 446 REMARK 465 GLY B 447 REMARK 465 GLU B 448 REMARK 465 THR B 449 REMARK 465 GLY B 450 REMARK 465 CYS B 451 REMARK 465 ALA B 452 REMARK 465 LYS B 453 REMARK 465 HIS B 454 REMARK 465 GLY B 455 REMARK 465 THR B 456 REMARK 465 ASP B 457 REMARK 465 LYS B 458 REMARK 465 ASP B 459 REMARK 465 LYS B 460 REMARK 465 CYS B 461 REMARK 465 GLU B 462 REMARK 465 ASN B 463 REMARK 465 ASP B 464 REMARK 465 LYS B 465 REMARK 465 SER B 466 REMARK 465 CYS B 467 REMARK 465 LYS B 468 REMARK 465 TRP B 469 REMARK 465 GLU B 470 REMARK 465 ASN B 471 REMARK 465 ASN B 472 REMARK 465 ALA B 473 REMARK 465 CYS B 474 REMARK 465 LYS B 475 REMARK 465 ASP B 476 REMARK 465 SER B 477 REMARK 465 SER B 478 REMARK 465 ILE B 479 REMARK 465 LEU B 480 REMARK 465 ALA B 481 REMARK 465 THR B 482 REMARK 465 LYS B 483 REMARK 465 LYS B 484 REMARK 465 PHE B 485 REMARK 465 ALA B 486 REMARK 465 LEU B 487 REMARK 465 SER B 488 REMARK 465 MET B 489 REMARK 465 VAL B 490 REMARK 465 SER B 491 REMARK 465 ALA B 492 REMARK 465 ALA B 493 REMARK 465 PHE B 494 REMARK 465 VAL B 495 REMARK 465 THR B 496 REMARK 465 LEU B 497 REMARK 465 LEU B 498 REMARK 465 PHE B 499 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 137 CG CD CE NZ REMARK 470 LYS A 176 CG CD CE NZ REMARK 470 ILE A 177 CG1 CG2 CD1 REMARK 470 SER A 209 OG REMARK 470 ASP A 253 CG OD1 OD2 REMARK 470 ASP A 319 CG OD1 OD2 REMARK 470 ASN A 323 CG OD1 ND2 REMARK 470 GLU B 130 CG CD OE1 OE2 REMARK 470 ARG B 131 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 146 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 151 CG CD CE NZ REMARK 470 ARG B 153 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 176 CG CD CE NZ REMARK 470 GLU B 180 CG CD OE1 OE2 REMARK 470 HIS B 181 CG ND1 CD2 CE1 NE2 REMARK 470 VAL B 205 CG1 CG2 REMARK 470 LYS B 297 CG CD CE NZ REMARK 470 ASN B 306 CG OD1 ND2 REMARK 470 GLU B 320 CG CD OE1 OE2 REMARK 470 GLN B 381 CG CD OE1 NE2 REMARK 470 GLU B 382 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 155 44.49 -140.57 REMARK 500 LEU A 191 -58.97 70.86 REMARK 500 ALA A 242 75.50 -165.72 REMARK 500 LEU A 365 66.16 -103.67 REMARK 500 LEU B 191 -58.61 71.50 REMARK 500 GLU B 217 -159.30 -136.98 REMARK 500 ALA B 242 74.58 -163.95 REMARK 500 LYS B 339 -52.81 -120.54 REMARK 500 LEU B 365 59.20 -93.88 REMARK 500 REMARK 500 REMARK: NULL DBREF 6Z8G A 1 499 UNP Q58NS4 Q58NS4_9TRYP 1 499 DBREF 6Z8G B 1 499 UNP Q58NS4 Q58NS4_9TRYP 1 499 SEQRES 1 A 499 MET GLN ARG LEU GLY THR ALA VAL PHE PHE LEU LEU ALA SEQRES 2 A 499 PHE ARG TYR SER THR GLU GLN ALA VAL GLY LEU LYS GLU SEQRES 3 A 499 PRO ASN ALA PRO CYS THR THR ALA CYS GLY CYS LYS SER SEQRES 4 A 499 ARG LEU LEU LYS ARG LEU ASP LEU TYR THR SER LYS TYR SEQRES 5 A 499 ALA ASP GLY ILE ASN ASN GLU ARG GLU ASN SER GLU ALA SEQRES 6 A 499 TYR SER LYS LEU VAL THR ALA ALA LEU ALA ALA VAL PRO SEQRES 7 A 499 THR MET GLN ARG LYS ILE LEU PRO LEU LEU GLY ALA ALA SEQRES 8 A 499 ALA ASP ILE LEU ASP ILE CYS ARG ARG GLU LEU ALA THR SEQRES 9 A 499 ALA ARG PRO LEU VAL GLN ALA ALA ILE SER LYS ILE GLU SEQRES 10 A 499 GLU ALA ALA GLY VAL TYR ASN THR LEU HIS LYS LEU GLU SEQRES 11 A 499 ARG GLY LEU GLY GLU ALA LYS ILE GLU PHE GLY GLY THR SEQRES 12 A 499 ASP LEU ARG LEU THR LYS THR LYS PHE ARG ALA THR SER SEQRES 13 A 499 LEU GLY THR ILE HIS THR ALA ASP CYS PRO ASN ALA ASP SEQRES 14 A 499 PRO GLY GLU THR ASN VAL LYS ILE GLY LEU GLU HIS GLU SEQRES 15 A 499 GLU ASN GLU PRO GLU PRO ALA LYS LEU ILE THR HIS GLY SEQRES 16 A 499 HIS LEU ASP ALA THR CYS ALA SER GLY VAL GLY GLN SER SEQRES 17 A 499 SER SER CYS HIS THR THR ALA VAL GLU ALA ASN THR HIS SEQRES 18 A 499 LEU THR LEU GLY LEU THR PHE SER GLY SER SER LYS ASP SEQRES 19 A 499 GLU SER ALA THR TRP ASN ALA ALA THR ASN ASN LYS ARG SEQRES 20 A 499 ALA ILE HIS SER ASN ASP ALA ASP PHE LEU GLY SER ASN SEQRES 21 A 499 ALA THR VAL ALA HIS GLU ALA LEU LYS ALA ILE ARG SER SEQRES 22 A 499 ALA GLY ALA SER THR PRO CYS SER SER LEU ILE THR ASP SEQRES 23 A 499 PHE ASN ALA VAL ARG ALA ASN PRO LYS PHE LYS LEU MET SEQRES 24 A 499 VAL ILE LYS ALA LEU LEU ASN LYS PRO THR ALA GLU LYS SEQRES 25 A 499 GLU SER ASP ALA PRO ALA ASP GLU VAL ASN ASN ALA ILE SEQRES 26 A 499 ASN SER ALA TYR GLY ARG GLU GLY SER GLU TYR ASN THR SEQRES 27 A 499 LYS THR TRP LYS ASP ILE GLY SER THR ARG ILE PRO LYS SEQRES 28 A 499 ALA ASP PRO PRO GLY GLU LYS THR ASP THR ILE ASP LYS SEQRES 29 A 499 LEU SER SER LEU PRO GLN TRP GLY ASP ALA ILE ALA ARG SEQRES 30 A 499 LEU LEU LEU GLN GLU ILE THR LYS GLN GLU GLU GLN SER SEQRES 31 A 499 ILE LYS THR SER SER ASP GLU ALA THR ASN LYS GLU CYS SEQRES 32 A 499 ASP LYS HIS THR ALA LYS THR GLU GLY GLU CYS THR LYS SEQRES 33 A 499 LEU GLY CYS ASP TYR ASP ALA GLU ASN LYS LYS CYS LYS SEQRES 34 A 499 PRO LYS SER GLU LYS GLU THR THR ALA ALA GLY LYS LYS SEQRES 35 A 499 ASP ARG ALA ALA GLY GLU THR GLY CYS ALA LYS HIS GLY SEQRES 36 A 499 THR ASP LYS ASP LYS CYS GLU ASN ASP LYS SER CYS LYS SEQRES 37 A 499 TRP GLU ASN ASN ALA CYS LYS ASP SER SER ILE LEU ALA SEQRES 38 A 499 THR LYS LYS PHE ALA LEU SER MET VAL SER ALA ALA PHE SEQRES 39 A 499 VAL THR LEU LEU PHE SEQRES 1 B 499 MET GLN ARG LEU GLY THR ALA VAL PHE PHE LEU LEU ALA SEQRES 2 B 499 PHE ARG TYR SER THR GLU GLN ALA VAL GLY LEU LYS GLU SEQRES 3 B 499 PRO ASN ALA PRO CYS THR THR ALA CYS GLY CYS LYS SER SEQRES 4 B 499 ARG LEU LEU LYS ARG LEU ASP LEU TYR THR SER LYS TYR SEQRES 5 B 499 ALA ASP GLY ILE ASN ASN GLU ARG GLU ASN SER GLU ALA SEQRES 6 B 499 TYR SER LYS LEU VAL THR ALA ALA LEU ALA ALA VAL PRO SEQRES 7 B 499 THR MET GLN ARG LYS ILE LEU PRO LEU LEU GLY ALA ALA SEQRES 8 B 499 ALA ASP ILE LEU ASP ILE CYS ARG ARG GLU LEU ALA THR SEQRES 9 B 499 ALA ARG PRO LEU VAL GLN ALA ALA ILE SER LYS ILE GLU SEQRES 10 B 499 GLU ALA ALA GLY VAL TYR ASN THR LEU HIS LYS LEU GLU SEQRES 11 B 499 ARG GLY LEU GLY GLU ALA LYS ILE GLU PHE GLY GLY THR SEQRES 12 B 499 ASP LEU ARG LEU THR LYS THR LYS PHE ARG ALA THR SER SEQRES 13 B 499 LEU GLY THR ILE HIS THR ALA ASP CYS PRO ASN ALA ASP SEQRES 14 B 499 PRO GLY GLU THR ASN VAL LYS ILE GLY LEU GLU HIS GLU SEQRES 15 B 499 GLU ASN GLU PRO GLU PRO ALA LYS LEU ILE THR HIS GLY SEQRES 16 B 499 HIS LEU ASP ALA THR CYS ALA SER GLY VAL GLY GLN SER SEQRES 17 B 499 SER SER CYS HIS THR THR ALA VAL GLU ALA ASN THR HIS SEQRES 18 B 499 LEU THR LEU GLY LEU THR PHE SER GLY SER SER LYS ASP SEQRES 19 B 499 GLU SER ALA THR TRP ASN ALA ALA THR ASN ASN LYS ARG SEQRES 20 B 499 ALA ILE HIS SER ASN ASP ALA ASP PHE LEU GLY SER ASN SEQRES 21 B 499 ALA THR VAL ALA HIS GLU ALA LEU LYS ALA ILE ARG SER SEQRES 22 B 499 ALA GLY ALA SER THR PRO CYS SER SER LEU ILE THR ASP SEQRES 23 B 499 PHE ASN ALA VAL ARG ALA ASN PRO LYS PHE LYS LEU MET SEQRES 24 B 499 VAL ILE LYS ALA LEU LEU ASN LYS PRO THR ALA GLU LYS SEQRES 25 B 499 GLU SER ASP ALA PRO ALA ASP GLU VAL ASN ASN ALA ILE SEQRES 26 B 499 ASN SER ALA TYR GLY ARG GLU GLY SER GLU TYR ASN THR SEQRES 27 B 499 LYS THR TRP LYS ASP ILE GLY SER THR ARG ILE PRO LYS SEQRES 28 B 499 ALA ASP PRO PRO GLY GLU LYS THR ASP THR ILE ASP LYS SEQRES 29 B 499 LEU SER SER LEU PRO GLN TRP GLY ASP ALA ILE ALA ARG SEQRES 30 B 499 LEU LEU LEU GLN GLU ILE THR LYS GLN GLU GLU GLN SER SEQRES 31 B 499 ILE LYS THR SER SER ASP GLU ALA THR ASN LYS GLU CYS SEQRES 32 B 499 ASP LYS HIS THR ALA LYS THR GLU GLY GLU CYS THR LYS SEQRES 33 B 499 LEU GLY CYS ASP TYR ASP ALA GLU ASN LYS LYS CYS LYS SEQRES 34 B 499 PRO LYS SER GLU LYS GLU THR THR ALA ALA GLY LYS LYS SEQRES 35 B 499 ASP ARG ALA ALA GLY GLU THR GLY CYS ALA LYS HIS GLY SEQRES 36 B 499 THR ASP LYS ASP LYS CYS GLU ASN ASP LYS SER CYS LYS SEQRES 37 B 499 TRP GLU ASN ASN ALA CYS LYS ASP SER SER ILE LEU ALA SEQRES 38 B 499 THR LYS LYS PHE ALA LEU SER MET VAL SER ALA ALA PHE SEQRES 39 B 499 VAL THR LEU LEU PHE HET NAG C 1 14 HET NAG C 2 14 HET BMA C 3 11 HET MAN C 4 11 HET NAG D 1 14 HET NAG D 2 14 HET BMA D 3 11 HET MAN D 4 11 HET BR A 501 1 HET BR A 502 1 HET BR A 503 1 HET BR A 504 1 HET BR A 505 1 HET BR A 506 1 HET SO4 B 501 5 HET BR B 502 1 HET BR B 503 1 HET BR B 504 1 HET BR B 505 1 HET BR B 506 1 HET BR B 507 1 HET BR B 508 1 HET BR B 509 1 HET BR B 510 1 HET BR B 511 1 HET BR B 512 1 HET BR B 513 1 HET BR B 514 1 HET BR B 515 1 HET BR B 516 1 HET BR B 517 1 HET BR B 518 1 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETNAM BR BROMIDE ION HETNAM SO4 SULFATE ION HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE FORMUL 3 NAG 4(C8 H15 N O6) FORMUL 3 BMA 2(C6 H12 O6) FORMUL 3 MAN 2(C6 H12 O6) FORMUL 5 BR 23(BR 1-) FORMUL 11 SO4 O4 S 2- FORMUL 29 HOH *529(H2 O) HELIX 1 AA1 THR A 33 ALA A 76 1 44 HELIX 2 AA2 VAL A 77 GLU A 130 1 54 HELIX 3 AA3 THR A 148 THR A 150 5 3 HELIX 4 AA4 GLY A 178 GLU A 185 5 8 HELIX 5 AA5 GLU A 235 ASN A 240 1 6 HELIX 6 AA6 SER A 259 ALA A 274 1 16 HELIX 7 AA7 ASP A 286 ALA A 292 1 7 HELIX 8 AA8 ASN A 293 LEU A 305 1 13 HELIX 9 AA9 LYS A 312 ALA A 316 5 5 HELIX 10 AB1 PRO A 317 GLY A 330 1 14 HELIX 11 AB2 ARG A 331 SER A 334 5 4 HELIX 12 AB3 LYS A 339 SER A 346 1 8 HELIX 13 AB4 SER A 367 THR A 384 1 18 HELIX 14 AB5 THR B 33 ALA B 76 1 44 HELIX 15 AB6 VAL B 77 GLU B 130 1 54 HELIX 16 AB7 THR B 148 THR B 150 5 3 HELIX 17 AB8 GLY B 178 GLU B 182 5 5 HELIX 18 AB9 GLY B 204 SER B 208 5 5 HELIX 19 AC1 GLU B 235 ASN B 240 1 6 HELIX 20 AC2 SER B 259 ALA B 274 1 16 HELIX 21 AC3 ASP B 286 ALA B 292 1 7 HELIX 22 AC4 LYS B 295 LEU B 305 1 11 HELIX 23 AC5 LYS B 312 ALA B 316 5 5 HELIX 24 AC6 PRO B 317 GLY B 330 1 14 HELIX 25 AC7 ARG B 331 SER B 334 5 4 HELIX 26 AC8 LYS B 339 SER B 346 1 8 HELIX 27 AC9 SER B 367 THR B 384 1 18 SHEET 1 AA1 5 PHE A 152 THR A 155 0 SHEET 2 AA1 5 GLU A 135 GLU A 139 -1 N LYS A 137 O ALA A 154 SHEET 3 AA1 5 HIS A 221 SER A 229 -1 O LEU A 222 N ILE A 138 SHEET 4 AA1 5 HIS A 194 ALA A 202 -1 N HIS A 196 O THR A 227 SHEET 5 AA1 5 ARG A 247 ASP A 253 -1 O HIS A 250 N LEU A 197 SHEET 1 AA2 2 ARG A 348 LYS A 351 0 SHEET 2 AA2 2 LYS A 358 THR A 361 -1 O ASP A 360 N ILE A 349 SHEET 1 AA3 5 PHE B 152 THR B 155 0 SHEET 2 AA3 5 GLU B 135 GLU B 139 -1 N LYS B 137 O ALA B 154 SHEET 3 AA3 5 HIS B 221 SER B 229 -1 O LEU B 222 N ILE B 138 SHEET 4 AA3 5 HIS B 194 SER B 203 -1 N HIS B 196 O THR B 227 SHEET 5 AA3 5 SER B 209 SER B 210 -1 O SER B 209 N SER B 203 SHEET 1 AA4 5 PHE B 152 THR B 155 0 SHEET 2 AA4 5 GLU B 135 GLU B 139 -1 N LYS B 137 O ALA B 154 SHEET 3 AA4 5 HIS B 221 SER B 229 -1 O LEU B 222 N ILE B 138 SHEET 4 AA4 5 HIS B 194 SER B 203 -1 N HIS B 196 O THR B 227 SHEET 5 AA4 5 ARG B 247 ASP B 253 -1 O ASN B 252 N GLY B 195 SHEET 1 AA5 2 ARG B 348 LYS B 351 0 SHEET 2 AA5 2 LYS B 358 THR B 361 -1 O ASP B 360 N ILE B 349 SSBOND 1 CYS A 31 CYS A 37 1555 1555 2.07 SSBOND 2 CYS A 35 CYS A 165 1555 1555 2.04 SSBOND 3 CYS A 98 CYS A 280 1555 1555 2.05 SSBOND 4 CYS A 201 CYS A 211 1555 1555 2.06 SSBOND 5 CYS B 31 CYS B 37 1555 1555 2.07 SSBOND 6 CYS B 35 CYS B 165 1555 1555 2.06 SSBOND 7 CYS B 98 CYS B 280 1555 1555 2.05 SSBOND 8 CYS B 201 CYS B 211 1555 1555 2.06 LINK ND2 ASN A 260 C1 NAG C 1 1555 1555 1.45 LINK ND2 ASN B 260 C1 NAG D 1 1555 1555 1.46 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.43 LINK O4 NAG C 2 C1 BMA C 3 1555 1555 1.43 LINK O6 BMA C 3 C1 MAN C 4 1555 1555 1.44 LINK O4 NAG D 1 C1 NAG D 2 1555 1555 1.43 LINK O4 NAG D 2 C1 BMA D 3 1555 1555 1.45 LINK O6 BMA D 3 C1 MAN D 4 1555 1555 1.45 CRYST1 74.148 68.407 157.759 90.00 92.17 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013487 0.000000 0.000510 0.00000 SCALE2 0.000000 0.014618 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006343 0.00000