HEADER HYDROLASE 03-JUN-20 6Z9D TITLE HUMAN ECTO-5'-NUCLEOTIDASE (CD73) IN COMPLEX WITH AOPCP DERIVATIVE TITLE 2 AB680 (COMPOUND 55 IN PUBLICATION) IN THE CLOSED FORM (CRYSTAL FORM TITLE 3 III) COMPND MOL_ID: 1; COMPND 2 MOLECULE: 5'-NUCLEOTIDASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: 5'-NT,ECTO-5'-NUCLEOTIDASE; COMPND 5 EC: 3.1.3.5; COMPND 6 ENGINEERED: YES; COMPND 7 OTHER_DETAILS: CD73 CONSTRUCT 8.0 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: NT5E, NT5, NTE; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ZINC ENZYME, NUCLEOTIDE ANALOG, INHIBITOR, ARCUS BIOSCIENCES, KEYWDS 2 HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR N.STRATER REVDAT 3 24-JAN-24 6Z9D 1 REMARK REVDAT 2 04-NOV-20 6Z9D 1 JRNL REVDAT 1 16-SEP-20 6Z9D 0 JRNL AUTH K.V.LAWSON,J.KALISIAK,E.A.LINDSEY,E.T.NEWCOMB,M.R.LELETI, JRNL AUTH 2 L.DEBIEN,B.R.ROSEN,D.H.MILES,E.U.SHARIF,J.L.JEFFREY, JRNL AUTH 3 J.B.L.TAN,A.CHEN,S.ZHAO,G.XU,L.FU,L.JIN,T.W.PARK,W.BERRY, JRNL AUTH 4 S.MOSCHUTZ,E.SCALETTI,N.STRATER,N.P.WALKER,S.W.YOUNG, JRNL AUTH 5 M.J.WALTERS,U.SCHINDLER,J.P.POWERS JRNL TITL DISCOVERY OF AB680: A POTENT AND SELECTIVE INHIBITOR OF JRNL TITL 2 CD73. JRNL REF J.MED.CHEM. V. 63 11448 2020 JRNL REFN ISSN 0022-2623 JRNL PMID 32614585 JRNL DOI 10.1021/ACS.JMEDCHEM.0C00525 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.10.3 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.13 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 47069 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.214 REMARK 3 R VALUE (WORKING SET) : 0.211 REMARK 3 FREE R VALUE : 0.254 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.950 REMARK 3 FREE R VALUE TEST SET COUNT : 2329 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 50 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 1.91 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 94.32 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 942 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2646 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 887 REMARK 3 BIN R VALUE (WORKING SET) : 0.2645 REMARK 3 BIN FREE R VALUE : 0.2668 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.84 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 55 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.000 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3997 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 40 REMARK 3 SOLVENT ATOMS : 304 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 35.72 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 53.22 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.30240 REMARK 3 B22 (A**2) : -2.48480 REMARK 3 B33 (A**2) : 3.78720 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.320 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.159 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.149 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.154 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.147 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.952 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.937 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 4162 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 5651 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1450 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES : 748 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 4162 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : 0 ; 5.000 ; SEMIHARMONIC REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 531 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 5078 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.17 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.59 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 17.54 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: {A|1 - A|333 A|601 - A|603} REMARK 3 ORIGIN FOR THE GROUP (A): -21.5765 21.1336 -16.4328 REMARK 3 T TENSOR REMARK 3 T11: -0.1469 T22: 0.0614 REMARK 3 T33: -0.1548 T12: 0.0613 REMARK 3 T13: -0.0193 T23: -0.1293 REMARK 3 L TENSOR REMARK 3 L11: 1.5521 L22: 1.4097 REMARK 3 L33: 4.2995 L12: -0.4329 REMARK 3 L13: 0.7615 L23: -0.6821 REMARK 3 S TENSOR REMARK 3 S11: -0.0727 S12: 0.1135 S13: 0.0682 REMARK 3 S21: 0.1476 S22: -0.1209 S23: 0.0309 REMARK 3 S31: -0.4551 S32: -0.1560 S33: 0.1937 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: {A|334 - A|549} REMARK 3 ORIGIN FOR THE GROUP (A): -18.1873 18.7166 -47.9366 REMARK 3 T TENSOR REMARK 3 T11: -0.2934 T22: 0.2135 REMARK 3 T33: -0.2292 T12: -0.0064 REMARK 3 T13: 0.0034 T23: -0.0013 REMARK 3 L TENSOR REMARK 3 L11: 1.7153 L22: 1.5393 REMARK 3 L33: 7.2314 L12: -0.2859 REMARK 3 L13: 0.4894 L23: 1.6173 REMARK 3 S TENSOR REMARK 3 S11: -0.2535 S12: 0.1972 S13: 0.1659 REMARK 3 S21: 0.0058 S22: 0.1442 S23: -0.1452 REMARK 3 S31: -0.2977 S32: 0.5442 S33: 0.1093 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6Z9D COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 08-JUN-20. REMARK 100 THE DEPOSITION ID IS D_1292109163. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-MAR-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.91841 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.6.3 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 47139 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 78.480 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 6.200 REMARK 200 R MERGE (I) : 0.10600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.94 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.2 REMARK 200 DATA REDUNDANCY IN SHELL : 4.90 REMARK 200 R MERGE FOR SHELL (I) : 0.95100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: BUSTER REMARK 200 STARTING MODEL: 4H2I REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.59 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.39 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: CRYSTALLIZATION BUFFER: 5 % PEG 6000, REMARK 280 0.1 M MES PH 6.0. 1 UL CRYSTALLIZATION BUFFER + 1 UL OF 4 MG/ML REMARK 280 CD73 IN 50 MM TRIS PH 8.0, 100 MM NACL, 10 UM ZNCL2, 1 MM AB680., REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 117.71400 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 117.71400 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 26.61300 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 47.12700 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 26.61300 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 47.12700 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 117.71400 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 26.61300 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 47.12700 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 117.71400 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 26.61300 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 47.12700 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2540 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 38790 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -31.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -53.22600 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -117.71400 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 8 REMARK 465 GLU A 9 REMARK 465 TRP A 10 REMARK 465 SER A 11 REMARK 465 TRP A 12 REMARK 465 VAL A 13 REMARK 465 PHE A 14 REMARK 465 LEU A 15 REMARK 465 PHE A 16 REMARK 465 PHE A 17 REMARK 465 LEU A 18 REMARK 465 SER A 19 REMARK 465 VAL A 20 REMARK 465 THR A 21 REMARK 465 THR A 22 REMARK 465 GLY A 23 REMARK 465 VAL A 24 REMARK 465 HIS A 25 REMARK 465 SER A 26 REMARK 465 ARG A 374 REMARK 465 HIS A 375 REMARK 465 THR A 376 REMARK 465 ASP A 377 REMARK 465 GLU A 378 REMARK 465 MET A 379 REMARK 465 PHE A 380 REMARK 465 TRP A 381 REMARK 465 ASN A 382 REMARK 465 GLY A 550 REMARK 465 GLY A 551 REMARK 465 GLY A 552 REMARK 465 GLY A 553 REMARK 465 ALA A 554 REMARK 465 GLY A 555 REMARK 465 GLY A 556 REMARK 465 GLY A 557 REMARK 465 GLY A 558 REMARK 465 HIS A 559 REMARK 465 HIS A 560 REMARK 465 HIS A 561 REMARK 465 HIS A 562 REMARK 465 HIS A 563 REMARK 465 HIS A 564 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 48 5.98 86.77 REMARK 500 VAL A 52 -61.86 -106.35 REMARK 500 GLN A 88 129.37 66.15 REMARK 500 SER A 141 116.31 -174.72 REMARK 500 HIS A 243 -35.85 82.16 REMARK 500 SER A 255 -158.82 -144.76 REMARK 500 TYR A 281 -121.16 54.69 REMARK 500 ASN A 306 154.44 176.31 REMARK 500 ASN A 402 25.27 -70.91 REMARK 500 ASP A 467 32.63 -142.97 REMARK 500 LYS A 536 -52.07 71.14 REMARK 500 TYR A 539 56.00 -154.45 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1003 DISTANCE = 5.91 ANGSTROMS REMARK 525 HOH A1004 DISTANCE = 7.76 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 601 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 36 OD1 REMARK 620 2 HIS A 38 NE2 113.5 REMARK 620 3 ASP A 85 OD2 90.2 100.4 REMARK 620 4 QDH A 604 O3 153.4 90.6 96.5 REMARK 620 5 HOH A 707 O 70.8 169.9 70.1 87.3 REMARK 620 6 HOH A 710 O 96.7 82.1 171.0 74.7 106.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 602 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 85 OD2 REMARK 620 2 ASN A 117 OD1 106.3 REMARK 620 3 HIS A 220 NE2 79.9 96.7 REMARK 620 4 HIS A 243 ND1 164.2 89.5 97.2 REMARK 620 5 QDH A 604 O4 84.3 90.8 163.8 97.1 REMARK 620 6 HOH A 707 O 79.0 173.5 87.8 85.4 86.0 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 603 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 213 O REMARK 620 2 ASP A 237 OD1 134.0 REMARK 620 3 ASP A 237 OD2 85.2 48.9 REMARK 620 4 GLY A 298 O 94.3 89.1 97.4 REMARK 620 5 HOH A 727 O 88.5 83.2 74.9 171.6 REMARK 620 6 HOH A 946 O 110.2 115.9 163.7 87.3 99.1 REMARK 620 N 1 2 3 4 5 DBREF 6Z9D A 27 549 UNP P21589 5NTD_HUMAN 27 549 SEQADV 6Z9D MET A 8 UNP P21589 INITIATING METHIONINE SEQADV 6Z9D GLU A 9 UNP P21589 EXPRESSION TAG SEQADV 6Z9D TRP A 10 UNP P21589 EXPRESSION TAG SEQADV 6Z9D SER A 11 UNP P21589 EXPRESSION TAG SEQADV 6Z9D TRP A 12 UNP P21589 EXPRESSION TAG SEQADV 6Z9D VAL A 13 UNP P21589 EXPRESSION TAG SEQADV 6Z9D PHE A 14 UNP P21589 EXPRESSION TAG SEQADV 6Z9D LEU A 15 UNP P21589 EXPRESSION TAG SEQADV 6Z9D PHE A 16 UNP P21589 EXPRESSION TAG SEQADV 6Z9D PHE A 17 UNP P21589 EXPRESSION TAG SEQADV 6Z9D LEU A 18 UNP P21589 EXPRESSION TAG SEQADV 6Z9D SER A 19 UNP P21589 EXPRESSION TAG SEQADV 6Z9D VAL A 20 UNP P21589 EXPRESSION TAG SEQADV 6Z9D THR A 21 UNP P21589 EXPRESSION TAG SEQADV 6Z9D THR A 22 UNP P21589 EXPRESSION TAG SEQADV 6Z9D GLY A 23 UNP P21589 EXPRESSION TAG SEQADV 6Z9D VAL A 24 UNP P21589 EXPRESSION TAG SEQADV 6Z9D HIS A 25 UNP P21589 EXPRESSION TAG SEQADV 6Z9D SER A 26 UNP P21589 EXPRESSION TAG SEQADV 6Z9D ASP A 53 UNP P21589 ASN 53 CONFLICT SEQADV 6Z9D ASP A 311 UNP P21589 ASN 311 CONFLICT SEQADV 6Z9D ASP A 333 UNP P21589 ASN 333 CONFLICT SEQADV 6Z9D ASP A 403 UNP P21589 ASN 403 CONFLICT SEQADV 6Z9D GLY A 550 UNP P21589 EXPRESSION TAG SEQADV 6Z9D GLY A 551 UNP P21589 EXPRESSION TAG SEQADV 6Z9D GLY A 552 UNP P21589 EXPRESSION TAG SEQADV 6Z9D GLY A 553 UNP P21589 EXPRESSION TAG SEQADV 6Z9D ALA A 554 UNP P21589 EXPRESSION TAG SEQADV 6Z9D GLY A 555 UNP P21589 EXPRESSION TAG SEQADV 6Z9D GLY A 556 UNP P21589 EXPRESSION TAG SEQADV 6Z9D GLY A 557 UNP P21589 EXPRESSION TAG SEQADV 6Z9D GLY A 558 UNP P21589 EXPRESSION TAG SEQADV 6Z9D HIS A 559 UNP P21589 EXPRESSION TAG SEQADV 6Z9D HIS A 560 UNP P21589 EXPRESSION TAG SEQADV 6Z9D HIS A 561 UNP P21589 EXPRESSION TAG SEQADV 6Z9D HIS A 562 UNP P21589 EXPRESSION TAG SEQADV 6Z9D HIS A 563 UNP P21589 EXPRESSION TAG SEQADV 6Z9D HIS A 564 UNP P21589 EXPRESSION TAG SEQRES 1 A 557 MET GLU TRP SER TRP VAL PHE LEU PHE PHE LEU SER VAL SEQRES 2 A 557 THR THR GLY VAL HIS SER TRP GLU LEU THR ILE LEU HIS SEQRES 3 A 557 THR ASN ASP VAL HIS SER ARG LEU GLU GLN THR SER GLU SEQRES 4 A 557 ASP SER SER LYS CYS VAL ASP ALA SER ARG CYS MET GLY SEQRES 5 A 557 GLY VAL ALA ARG LEU PHE THR LYS VAL GLN GLN ILE ARG SEQRES 6 A 557 ARG ALA GLU PRO ASN VAL LEU LEU LEU ASP ALA GLY ASP SEQRES 7 A 557 GLN TYR GLN GLY THR ILE TRP PHE THR VAL TYR LYS GLY SEQRES 8 A 557 ALA GLU VAL ALA HIS PHE MET ASN ALA LEU ARG TYR ASP SEQRES 9 A 557 ALA MET ALA LEU GLY ASN HIS GLU PHE ASP ASN GLY VAL SEQRES 10 A 557 GLU GLY LEU ILE GLU PRO LEU LEU LYS GLU ALA LYS PHE SEQRES 11 A 557 PRO ILE LEU SER ALA ASN ILE LYS ALA LYS GLY PRO LEU SEQRES 12 A 557 ALA SER GLN ILE SER GLY LEU TYR LEU PRO TYR LYS VAL SEQRES 13 A 557 LEU PRO VAL GLY ASP GLU VAL VAL GLY ILE VAL GLY TYR SEQRES 14 A 557 THR SER LYS GLU THR PRO PHE LEU SER ASN PRO GLY THR SEQRES 15 A 557 ASN LEU VAL PHE GLU ASP GLU ILE THR ALA LEU GLN PRO SEQRES 16 A 557 GLU VAL ASP LYS LEU LYS THR LEU ASN VAL ASN LYS ILE SEQRES 17 A 557 ILE ALA LEU GLY HIS SER GLY PHE GLU MET ASP LYS LEU SEQRES 18 A 557 ILE ALA GLN LYS VAL ARG GLY VAL ASP VAL VAL VAL GLY SEQRES 19 A 557 GLY HIS SER ASN THR PHE LEU TYR THR GLY ASN PRO PRO SEQRES 20 A 557 SER LYS GLU VAL PRO ALA GLY LYS TYR PRO PHE ILE VAL SEQRES 21 A 557 THR SER ASP ASP GLY ARG LYS VAL PRO VAL VAL GLN ALA SEQRES 22 A 557 TYR ALA PHE GLY LYS TYR LEU GLY TYR LEU LYS ILE GLU SEQRES 23 A 557 PHE ASP GLU ARG GLY ASN VAL ILE SER SER HIS GLY ASN SEQRES 24 A 557 PRO ILE LEU LEU ASP SER SER ILE PRO GLU ASP PRO SER SEQRES 25 A 557 ILE LYS ALA ASP ILE ASN LYS TRP ARG ILE LYS LEU ASP SEQRES 26 A 557 ASP TYR SER THR GLN GLU LEU GLY LYS THR ILE VAL TYR SEQRES 27 A 557 LEU ASP GLY SER SER GLN SER CYS ARG PHE ARG GLU CYS SEQRES 28 A 557 ASN MET GLY ASN LEU ILE CYS ASP ALA MET ILE ASN ASN SEQRES 29 A 557 ASN LEU ARG HIS THR ASP GLU MET PHE TRP ASN HIS VAL SEQRES 30 A 557 SER MET CYS ILE LEU ASN GLY GLY GLY ILE ARG SER PRO SEQRES 31 A 557 ILE ASP GLU ARG ASN ASP GLY THR ILE THR TRP GLU ASN SEQRES 32 A 557 LEU ALA ALA VAL LEU PRO PHE GLY GLY THR PHE ASP LEU SEQRES 33 A 557 VAL GLN LEU LYS GLY SER THR LEU LYS LYS ALA PHE GLU SEQRES 34 A 557 HIS SER VAL HIS ARG TYR GLY GLN SER THR GLY GLU PHE SEQRES 35 A 557 LEU GLN VAL GLY GLY ILE HIS VAL VAL TYR ASP LEU SER SEQRES 36 A 557 ARG LYS PRO GLY ASP ARG VAL VAL LYS LEU ASP VAL LEU SEQRES 37 A 557 CYS THR LYS CYS ARG VAL PRO SER TYR ASP PRO LEU LYS SEQRES 38 A 557 MET ASP GLU VAL TYR LYS VAL ILE LEU PRO ASN PHE LEU SEQRES 39 A 557 ALA ASN GLY GLY ASP GLY PHE GLN MET ILE LYS ASP GLU SEQRES 40 A 557 LEU LEU ARG HIS ASP SER GLY ASP GLN ASP ILE ASN VAL SEQRES 41 A 557 VAL SER THR TYR ILE SER LYS MET LYS VAL ILE TYR PRO SEQRES 42 A 557 ALA VAL GLU GLY ARG ILE LYS PHE SER GLY GLY GLY GLY SEQRES 43 A 557 ALA GLY GLY GLY GLY HIS HIS HIS HIS HIS HIS HET ZN A 601 1 HET ZN A 602 1 HET CA A 603 1 HET QDH A 604 57 HETNAM ZN ZINC ION HETNAM CA CALCIUM ION HETNAM QDH [[(2~{R},3~{S},4~{R},5~{R})-5-[6-CHLORANYL-4-[[(1~{S})- HETNAM 2 QDH 1-(2-FLUOROPHENYL)ETHYL]AMINO]PYRAZOLO[3,4-B]PYRIDIN- HETNAM 3 QDH 1-YL]-3,4-BIS(OXIDANYL)OXOLAN-2-YL]METHOXY-OXIDANYL- HETNAM 4 QDH PHOSPHORYL]METHYLPHOSPHONIC ACID FORMUL 2 ZN 2(ZN 2+) FORMUL 4 CA CA 2+ FORMUL 5 QDH C20 H24 CL F N4 O9 P2 FORMUL 6 HOH *304(H2 O) HELIX 1 AA1 ASP A 53 CYS A 57 5 5 HELIX 2 AA2 GLY A 60 GLU A 75 1 16 HELIX 3 AA3 THR A 90 LYS A 97 1 8 HELIX 4 AA4 GLY A 98 LEU A 108 1 11 HELIX 5 AA5 GLY A 116 ASP A 121 5 6 HELIX 6 AA6 VAL A 124 GLU A 129 1 6 HELIX 7 AA7 LEU A 150 SER A 155 1 6 HELIX 8 AA8 GLU A 180 LEU A 184 5 5 HELIX 9 AA9 ASP A 195 LEU A 210 1 16 HELIX 10 AB1 GLY A 222 VAL A 233 1 12 HELIX 11 AB2 ASP A 317 ASP A 332 1 16 HELIX 12 AB3 ASP A 333 SER A 335 5 3 HELIX 13 AB4 SER A 349 ARG A 354 1 6 HELIX 14 AB5 CYS A 358 LEU A 373 1 16 HELIX 15 AB6 GLY A 392 ILE A 394 5 3 HELIX 16 AB7 THR A 407 LEU A 415 1 9 HELIX 17 AB8 GLY A 428 VAL A 439 1 12 HELIX 18 AB9 ASN A 499 ASN A 503 1 5 HELIX 19 AC1 GLY A 504 GLY A 507 5 4 HELIX 20 AC2 PHE A 508 LEU A 515 1 8 HELIX 21 AC3 ASP A 524 LYS A 536 1 13 SHEET 1 AA1 6 ILE A 139 LEU A 140 0 SHEET 2 AA1 6 ALA A 112 ALA A 114 1 N MET A 113 O LEU A 140 SHEET 3 AA1 6 VAL A 78 ASP A 82 1 N ASP A 82 O ALA A 114 SHEET 4 AA1 6 GLU A 28 THR A 34 1 N LEU A 32 O LEU A 79 SHEET 5 AA1 6 TYR A 286 PHE A 294 -1 O LEU A 290 N ILE A 31 SHEET 6 AA1 6 VAL A 300 GLY A 305 -1 O HIS A 304 N LYS A 291 SHEET 1 AA2 6 ILE A 139 LEU A 140 0 SHEET 2 AA2 6 ALA A 112 ALA A 114 1 N MET A 113 O LEU A 140 SHEET 3 AA2 6 VAL A 78 ASP A 82 1 N ASP A 82 O ALA A 114 SHEET 4 AA2 6 GLU A 28 THR A 34 1 N LEU A 32 O LEU A 79 SHEET 5 AA2 6 TYR A 286 PHE A 294 -1 O LEU A 290 N ILE A 31 SHEET 6 AA2 6 ILE A 308 LEU A 309 -1 O ILE A 308 N LEU A 287 SHEET 1 AA3 2 ILE A 144 ALA A 146 0 SHEET 2 AA3 2 LEU A 191 PHE A 193 -1 O VAL A 192 N LYS A 145 SHEET 1 AA4 6 TYR A 161 VAL A 166 0 SHEET 2 AA4 6 GLU A 169 THR A 177 -1 O VAL A 171 N LEU A 164 SHEET 3 AA4 6 ILE A 215 HIS A 220 1 O LEU A 218 N VAL A 174 SHEET 4 AA4 6 VAL A 238 VAL A 240 1 O VAL A 238 N ALA A 217 SHEET 5 AA4 6 LYS A 274 VAL A 278 1 O VAL A 278 N VAL A 239 SHEET 6 AA4 6 PHE A 265 THR A 268 -1 N VAL A 267 O VAL A 275 SHEET 1 AA5 3 THR A 405 ILE A 406 0 SHEET 2 AA5 3 GLY A 340 THR A 342 -1 N GLY A 340 O ILE A 406 SHEET 3 AA5 3 VAL A 537 ILE A 538 1 O ILE A 538 N LYS A 341 SHEET 1 AA6 5 LEU A 450 GLY A 453 0 SHEET 2 AA6 5 MET A 386 ASN A 390 -1 N LEU A 389 O GLN A 451 SHEET 3 AA6 5 VAL A 492 PRO A 498 1 O ILE A 496 N MET A 386 SHEET 4 AA6 5 THR A 420 LYS A 427 -1 N LEU A 426 O TYR A 493 SHEET 5 AA6 5 ARG A 517 GLN A 523 -1 O ASP A 519 N LEU A 423 SHEET 1 AA7 4 TYR A 484 PRO A 486 0 SHEET 2 AA7 4 VAL A 469 LEU A 475 -1 N VAL A 474 O ASP A 485 SHEET 3 AA7 4 ILE A 455 TYR A 459 -1 N HIS A 456 O ASP A 473 SHEET 4 AA7 4 ILE A 546 PHE A 548 1 O LYS A 547 N TYR A 459 SSBOND 1 CYS A 51 CYS A 57 1555 1555 2.03 SSBOND 2 CYS A 353 CYS A 358 1555 1555 2.05 SSBOND 3 CYS A 365 CYS A 387 1555 1555 2.04 SSBOND 4 CYS A 476 CYS A 479 1555 1555 2.03 LINK OD1 ASP A 36 ZN ZN A 601 1555 1555 2.12 LINK NE2 HIS A 38 ZN ZN A 601 1555 1555 2.11 LINK OD2 ASP A 85 ZN ZN A 601 1555 1555 2.35 LINK OD2 ASP A 85 ZN ZN A 602 1555 1555 2.25 LINK OD1 ASN A 117 ZN ZN A 602 1555 1555 2.18 LINK O ASN A 213 CA CA A 603 1555 1555 2.28 LINK NE2 HIS A 220 ZN ZN A 602 1555 1555 2.04 LINK OD1 ASP A 237 CA CA A 603 1555 1555 2.66 LINK OD2 ASP A 237 CA CA A 603 1555 1555 2.63 LINK ND1 HIS A 243 ZN ZN A 602 1555 1555 2.16 LINK O GLY A 298 CA CA A 603 1555 1555 2.37 LINK ZN ZN A 601 O3 QDH A 604 1555 1555 2.11 LINK ZN ZN A 601 O HOH A 707 1555 1555 2.39 LINK ZN ZN A 601 O HOH A 710 1555 1555 2.52 LINK ZN ZN A 602 O4 QDH A 604 1555 1555 1.96 LINK ZN ZN A 602 O HOH A 707 1555 1555 2.03 LINK CA CA A 603 O HOH A 727 1555 1555 2.43 LINK CA CA A 603 O HOH A 946 1555 1555 2.73 CISPEP 1 TYR A 263 PRO A 264 0 -4.32 CRYST1 53.226 94.254 235.428 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018788 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010610 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004248 0.00000