HEADER CELL ADHESION 04-JUN-20 6Z9L TITLE ENTEROCOCCAL PRGA COMPND MOL_ID: 1; COMPND 2 MOLECULE: PRGA; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: POLY-ALANINE PEPTIDE; COMPND 7 CHAIN: F, G SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ENTEROCOCCUS FAECALIS; SOURCE 3 ORGANISM_TAXID: 1351; SOURCE 4 GENE: PRGA; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 9 ORGANISM_TAXID: 562 KEYWDS PROTEASE DOMAIN, CAP DOMAIN, CELL ADHESION, COILED-COIL EXPDTA X-RAY DIFFRACTION AUTHOR R.P.A.BERNTSSON,A.SCHMITT REVDAT 3 24-JAN-24 6Z9L 1 REMARK REVDAT 2 14-OCT-20 6Z9L 1 JRNL REVDAT 1 16-SEP-20 6Z9L 0 JRNL AUTH A.SCHMITT,H.HIRT,M.A.JARVA,W.S.SUN,J.TER BEEK,G.M.DUNNY, JRNL AUTH 2 R.P.BERNTSSON JRNL TITL ENTEROCOCCAL PRGA EXTENDS FAR OUTSIDE THE CELL AND PROVIDES JRNL TITL 2 SURFACE EXCLUSION TO PROTECT AGAINST UNWANTED CONJUGATION. JRNL REF J.MOL.BIOL. V. 432 5681 2020 JRNL REFN ESSN 1089-8638 JRNL PMID 32860774 JRNL DOI 10.1016/J.JMB.2020.08.018 REMARK 2 REMARK 2 RESOLUTION. 3.06 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.10.1 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.06 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.11 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 45473 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.288 REMARK 3 R VALUE (WORKING SET) : 0.287 REMARK 3 FREE R VALUE : 0.318 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.620 REMARK 3 FREE R VALUE TEST SET COUNT : 2099 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 49.1070 - 7.5451 1.00 3157 154 0.2416 0.2756 REMARK 3 2 7.5451 - 5.9922 1.00 2984 144 0.2914 0.3196 REMARK 3 3 5.9922 - 5.2357 1.00 2944 143 0.3164 0.3989 REMARK 3 4 5.2357 - 4.7575 1.00 2930 142 0.2643 0.3090 REMARK 3 5 4.7575 - 4.4167 1.00 2902 140 0.2595 0.3049 REMARK 3 6 4.4167 - 4.1564 1.00 2883 140 0.2478 0.2898 REMARK 3 7 4.1564 - 3.9484 1.00 2881 138 0.2562 0.2745 REMARK 3 8 3.9484 - 3.7766 1.00 2886 140 0.2770 0.3155 REMARK 3 9 3.7766 - 3.6312 1.00 2871 139 0.3175 0.3174 REMARK 3 10 3.6312 - 3.5060 1.00 2847 138 0.3485 0.3886 REMARK 3 11 3.5060 - 3.3964 1.00 2874 139 0.3715 0.3941 REMARK 3 12 3.3964 - 3.2993 1.00 2869 138 0.3719 0.3375 REMARK 3 13 3.2993 - 3.2125 1.00 2839 138 0.3956 0.3692 REMARK 3 14 3.2125 - 3.1341 1.00 2851 138 0.4162 0.4274 REMARK 3 15 3.1341 - 3.0630 0.93 2656 128 0.4291 0.4001 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.560 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 36.800 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 102.7 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 134.9 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 5972 REMARK 3 ANGLE : 0.576 8044 REMARK 3 CHIRALITY : 0.033 920 REMARK 3 PLANARITY : 0.002 1064 REMARK 3 DIHEDRAL : 16.793 3771 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6Z9L COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 05-JUN-20. REMARK 100 THE DEPOSITION ID IS D_1292109147. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-SEP-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.976247 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 45500 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.060 REMARK 200 RESOLUTION RANGE LOW (A) : 49.107 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 12.68 REMARK 200 R MERGE (I) : 0.25500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.5600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.06 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.25 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.2 REMARK 200 DATA REDUNDANCY IN SHELL : 11.22 REMARK 200 R MERGE FOR SHELL (I) : 2.58800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.750 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6Z9K REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 83.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 6.62 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 37.5% (V/V) PEG400, 0.1 M TRIS/HCL (PH REMARK 280 8.5), 0.114 M LISO4, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y,X,Z+3/4 REMARK 290 4555 Y,-X,Z+1/4 REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z+1/2 REMARK 290 7555 Y,X,-Z+1/4 REMARK 290 8555 -Y,-X,-Z+3/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 146.95400 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 220.43100 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 73.47700 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 146.95400 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 73.47700 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 220.43100 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, F, G REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 28 REMARK 465 GLU A 29 REMARK 465 GLN A 30 REMARK 465 ALA A 31 REMARK 465 GLN A 32 REMARK 465 PRO A 33 REMARK 465 LYS A 34 REMARK 465 THR A 35 REMARK 465 PRO A 36 REMARK 465 GLU A 37 REMARK 465 ASN A 38 REMARK 465 SER A 39 REMARK 465 SER A 40 REMARK 465 THR A 41 REMARK 465 GLU A 42 REMARK 465 GLN A 43 REMARK 465 PRO A 44 REMARK 465 THR A 45 REMARK 465 VAL A 46 REMARK 465 LYS A 47 REMARK 465 ALA A 48 REMARK 465 THR A 49 REMARK 465 GLN A 50 REMARK 465 THR A 51 REMARK 465 THR A 52 REMARK 465 GLU A 53 REMARK 465 GLN A 54 REMARK 465 LEU A 799 REMARK 465 GLU A 800 REMARK 465 ARG A 801 REMARK 465 GLU A 802 REMARK 465 ALA A 803 REMARK 465 LYS A 804 REMARK 465 GLN A 805 REMARK 465 ASN A 806 REMARK 465 GLN A 807 REMARK 465 THR A 808 REMARK 465 LEU A 809 REMARK 465 VAL A 810 REMARK 465 ALA A 811 REMARK 465 SER A 812 REMARK 465 ALA A 813 REMARK 465 THR A 814 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O SER A 369 HG1 THR A 373 1.52 REMARK 500 HH22 ARG A 380 O GLN A 483 1.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O TYR A 404 HZ1 LYS A 419 8665 1.57 REMARK 500 O TYR A 404 NZ LYS A 419 8665 2.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 131 -89.05 -75.49 REMARK 500 GLN A 165 0.61 -67.18 REMARK 500 PRO A 311 -169.68 -101.66 REMARK 500 ASP A 317 51.59 -105.15 REMARK 500 PHE A 341 -122.30 -129.38 REMARK 500 HIS A 359 55.82 -168.04 REMARK 500 TYR A 435 -47.87 -145.86 REMARK 500 GLU A 446 107.01 -164.05 REMARK 500 PHE A 468 -3.46 -143.47 REMARK 500 ASP A 469 47.56 -158.37 REMARK 500 ASN A 498 72.74 28.52 REMARK 500 GLU A 515 37.85 -83.53 REMARK 500 GLN A 519 33.16 -83.03 REMARK 500 ASN A 704 55.80 -111.91 REMARK 500 GLN A 797 -71.49 -66.32 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 901 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 902 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 903 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 904 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 905 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 906 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 907 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 908 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 909 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 910 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 911 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 912 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 913 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 914 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6Z9K RELATED DB: PDB REMARK 900 6Z9K CONTAINS ONE DOMAIN OF PRGA AT A HIGHER RESOLUTION DBREF 6Z9L A 28 814 UNP Q04111 Q04111_ENTFL 28 814 DBREF 6Z9L F 9 17 PDB 6Z9L 6Z9L 9 17 DBREF 6Z9L G 10 18 PDB 6Z9L 6Z9L 10 18 SEQRES 1 A 787 ALA GLU GLN ALA GLN PRO LYS THR PRO GLU ASN SER SER SEQRES 2 A 787 THR GLU GLN PRO THR VAL LYS ALA THR GLN THR THR GLU SEQRES 3 A 787 GLN ALA ILE THR GLU LYS GLN GLN GLN VAL THR GLU LYS SEQRES 4 A 787 GLN ALA ILE VAL ASP GLN LYS GLN GLN VAL ALA ASP THR SEQRES 5 A 787 ALA LYS LYS GLU LYS ASP ALA ILE ASP GLN SER VAL LYS SEQRES 6 A 787 ASP GLN GLN ALA VAL VAL ASP GLN ASN LYS ASP ALA LEU SEQRES 7 A 787 ASP GLN SER GLN GLN ALA VAL THR ASP GLN GLN ALA VAL SEQRES 8 A 787 VAL ASP GLU ALA LYS LYS VAL VAL ASP GLU ALA THR PRO SEQRES 9 A 787 SER ALA ILE GLU LYS ALA LYS GLU GLN VAL ALA THR ASP SEQRES 10 A 787 THR GLN ALA VAL ASP GLU GLN GLN LYS VAL VAL ASP GLN SEQRES 11 A 787 ALA GLN THR ASP VAL ASN GLN GLN GLN ALA VAL VAL ASP SEQRES 12 A 787 GLU LYS ALA LYS GLU THR ASN ALA ALA LYS VAL GLN ASN SEQRES 13 A 787 GLU LYS ASP GLN GLN ALA VAL THR ALA ALA LYS GLN GLU SEQRES 14 A 787 GLN ALA LYS LEU GLU GLU LEU ALA LYS ASN ALA GLU ALA SEQRES 15 A 787 GLU LYS VAL LYS ALA GLU LYS GLU GLN ALA ALA LYS GLU SEQRES 16 A 787 ALA GLU LEU ALA ASN LYS GLN LYS GLU GLU ALA LYS ALA SEQRES 17 A 787 LYS ASP GLN LYS THR LYS ASP ASP GLN ALA VAL ALA ASP SEQRES 18 A 787 GLN GLN THR VAL VAL THR THR SER GLN GLU LYS VAL THR SEQRES 19 A 787 ASP ALA LYS ALA ASP THR ALA ALA LYS GLN ALA ASP LEU SEQRES 20 A 787 THR ALA LYS GLU ASN ALA LEU LYS ASP LYS GLN ALA ALA SEQRES 21 A 787 THR LYS GLN ALA GLN ASN THR LEU ASP ASN SER LYS GLU SEQRES 22 A 787 GLU LEU LYS GLY HIS LYS GLY ILE ASN LEU PRO PRO LYS SEQRES 23 A 787 PHE SER ALA ASP TYR ASP THR LYS LEU SER ALA GLU GLU SEQRES 24 A 787 ILE ALA THR LEU GLU LYS THR ALA LEU GLU MET ASN LYS SEQRES 25 A 787 ASN PHE PRO THR SER LYS GLU ASP GLU LYS ASN LYS ASP SEQRES 26 A 787 VAL MET TRP ASP ILE GLN HIS LEU SER ALA ASP GLN LYS SEQRES 27 A 787 LYS GLU LEU SER VAL TYR THR THR GLU LEU LEU ASN ASP SEQRES 28 A 787 VAL ARG LYS LYS LEU GLY LEU SER GLN LEU SER VAL SER SEQRES 29 A 787 ASP GLN SER ILE LYS PHE ALA TRP ASP ILE ALA LYS TYR SEQRES 30 A 787 SER ASP THR GLY GLU TYR MET HIS ASP VAL ILE ALA ILE SEQRES 31 A 787 ASN LYS ALA ALA LYS GLU ASN GLY PHE LYS GLU TYR PRO SEQRES 32 A 787 GLY MET ASN TYR TYR GLU ASN LEU GLY GLY GLY TYR TYR SEQRES 33 A 787 GLU THR GLU ASN GLY LYS VAL SER LYS TYR THR LEU GLN SEQRES 34 A 787 GLU SER ILE ARG LYS MET LEU VAL ASN MET LEU PHE ASP SEQRES 35 A 787 ASP GLY ARG LEU GLY TYR SER HIS LEU HIS SER LEU LEU SEQRES 36 A 787 GLN ASP GLY LYS THR ALA LEU GLY VAL SER LEU SER GLY SEQRES 37 A 787 GLU LYS ASN SER ILE SER PRO LYS ILE HIS ILE ILE SER SEQRES 38 A 787 TYR GLY LYS GLU LYS LEU GLU ASP SER SER GLN TYR GLN SEQRES 39 A 787 ASN GLY GLU VAL ALA SER MET LYS SER LYS GLU GLU LEU SEQRES 40 A 787 GLN GLN GLU ILE ALA SER ASN GLN GLU LYS LEU ALA THR SEQRES 41 A 787 ALA GLN GLN ALA GLU SER ASP ALA GLN GLN ALA ARG SER SEQRES 42 A 787 ALA SER GLN GLN ALA LEU ASN THR ALA LYS THR THR GLN SEQRES 43 A 787 ALA THR ALA GLU LYS GLU LEU SER VAL HIS LYS ALA THR SEQRES 44 A 787 LEU ALA ASN LEU GLN ALA VAL ALA THR LYS SER THR THR SEQRES 45 A 787 ASN TYR GLU GLU LYS VAL ARG GLN THR ALA THR ALA GLU SEQRES 46 A 787 LYS SER LEU GLN GLN THR LYS ASP GLN LEU ALA THR ILE SEQRES 47 A 787 ASN GLU LEU ILE GLN ASN ARG ALA ALA VAL LEU GLU LYS SEQRES 48 A 787 ALA LYS THR ASN VAL ALA GLU ALA GLN ALA ILE GLU GLN SEQRES 49 A 787 THR SER ALA LYS VAL LEU LYS GLU LYS GLN GLU ALA GLN SEQRES 50 A 787 LYS ALA GLU GLU ASN THR LEU ASN SER LEU LYS GLU VAL SEQRES 51 A 787 LEU ASP LEU ALA LYS GLU ASN LEU ASN GLN LYS GLN VAL SEQRES 52 A 787 ALA LEU LYS THR SER THR ARG SER LEU SER ARG LEU GLU SEQRES 53 A 787 ASN ALA GLN PRO THR TYR GLU LYS ALA LEU ASN GLU LEU SEQRES 54 A 787 ASN LYS ALA GLU ALA ALA VAL VAL GLN ALA GLN GLU ALA SEQRES 55 A 787 TYR GLU ASN SER MET LYS SER LEU GLU GLU LEU LYS GLU SEQRES 56 A 787 GLN GLN ALA VAL ALA THR LEU ALA TYR ALA GLN ALA GLN SEQRES 57 A 787 GLU ASP LEU SER ASN ALA LYS LEU GLU LEU GLN GLN TYR SEQRES 58 A 787 GLN GLY VAL LEU ARG ASP LEU GLU ALA GLN GLN ALA GLU SEQRES 59 A 787 GLN ARG ARG GLN GLU ALA LEU GLN GLU GLN VAL ALA LYS SEQRES 60 A 787 GLU GLN GLN ARG LEU GLU ARG GLU ALA LYS GLN ASN GLN SEQRES 61 A 787 THR LEU VAL ALA SER ALA THR SEQRES 1 F 9 ALA ALA ALA ALA ALA ALA ALA ALA ALA SEQRES 1 G 9 ALA ALA ALA ALA ALA ALA ALA ALA ALA HET SO4 A 901 5 HET SO4 A 902 5 HET SO4 A 903 5 HET SO4 A 904 5 HET SO4 A 905 5 HET SO4 A 906 5 HET SO4 A 907 5 HET SO4 A 908 5 HET SO4 A 909 5 HET SO4 A 910 5 HET SO4 A 911 5 HET SO4 A 912 5 HET SO4 A 913 5 HET SO4 A 914 5 HETNAM SO4 SULFATE ION FORMUL 4 SO4 14(O4 S 2-) HELIX 1 AA1 ALA A 55 VAL A 126 1 72 HELIX 2 AA2 SER A 132 GLU A 301 1 170 HELIX 3 AA3 ASP A 317 LEU A 322 1 6 HELIX 4 AA4 SER A 323 LYS A 339 1 17 HELIX 5 AA5 SER A 344 LYS A 351 1 8 HELIX 6 AA6 SER A 361 LEU A 383 1 23 HELIX 7 AA7 SER A 391 SER A 405 1 15 HELIX 8 AA8 ASP A 413 ASN A 424 1 12 HELIX 9 AA9 LYS A 452 ASP A 469 1 18 HELIX 10 AB1 ASP A 470 GLY A 474 5 5 HELIX 11 AB2 TYR A 475 GLN A 483 1 9 HELIX 12 AB3 GLY A 510 LEU A 514 5 5 HELIX 13 AB4 SER A 530 ASN A 704 1 175 HELIX 14 AB5 ALA A 705 GLU A 764 1 60 HELIX 15 AB6 GLU A 764 ASP A 774 1 11 HELIX 16 AB7 ASP A 774 GLN A 789 1 16 HELIX 17 AB8 ALA F 10 ALA F 15 1 6 HELIX 18 AB9 ALA G 11 ALA G 15 1 5 SHEET 1 AA1 2 MET A 354 ASP A 356 0 SHEET 2 AA1 2 LYS A 449 SER A 451 -1 O VAL A 450 N TRP A 355 SHEET 1 AA2 2 SER A 389 VAL A 390 0 SHEET 2 AA2 2 GLU A 524 VAL A 525 -1 O GLU A 524 N VAL A 390 SHEET 1 AA3 3 GLU A 436 GLY A 440 0 SHEET 2 AA3 3 LYS A 503 TYR A 509 -1 O ILE A 506 N ASN A 437 SHEET 3 AA3 3 ALA A 488 SER A 494 -1 N GLY A 490 O ILE A 507 SITE 1 AC1 3 LYS A 303 THR A 343 LYS A 619 SITE 1 AC2 3 LYS A 351 TYR A 453 GLU A 612 SITE 1 AC3 3 GLN A 257 THR A 261 LYS A 264 SITE 1 AC4 2 LYS A 234 LYS A 604 SITE 1 AC5 3 GLN A 689 VAL A 690 LYS A 693 SITE 1 AC6 4 VAL A 353 TRP A 355 GLU A 367 LYS A 452 SITE 1 AC7 1 LYS A 211 SITE 1 AC8 4 GLN A 563 ASN A 567 GLU A 645 ALA A 648 SITE 1 AC9 4 GLU A 346 ASN A 350 GLU A 367 LYS A 452 SITE 1 AD1 3 LYS A 306 GLU A 374 LYS A 529 SITE 1 AD2 2 ASN A 447 LYS A 449 SITE 1 AD3 5 ASN A 567 THR A 568 THR A 571 THR A 652 SITE 2 AD3 5 LYS A 655 SITE 1 AD4 4 ASP A 243 SER A 499 ILE A 500 SER A 501 SITE 1 AD5 2 THR A 294 ASN A 297 CRYST1 126.356 126.356 293.908 90.00 90.00 90.00 P 43 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007914 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007914 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003402 0.00000