HEADER OXIDOREDUCTASE 04-JUN-20 6Z9O TITLE STRUCTURE OF [NIFESE] HYDROGENASE G491S VARIANT FROM DESULFOVIBRIO TITLE 2 VULGARIS HILDENBOROUGH PRESSURIZED WITH OXYGEN GAS - STRUCTURE G491A- TITLE 3 O2-LD COMPND MOL_ID: 1; COMPND 2 MOLECULE: PERIPLASMIC [NIFESE] HYDROGENASE, SMALL SUBUNIT; COMPND 3 CHAIN: A; COMPND 4 EC: 1.12.7.2; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: PERIPLASMIC [NIFESE] HYDROGENASE, LARGE SUBUNIT, COMPND 8 SELENOCYSTEINE-CONTAINING; COMPND 9 CHAIN: B; COMPND 10 EC: 1.12.7.2; COMPND 11 ENGINEERED: YES; COMPND 12 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DESULFOVIBRIO VULGARIS (STRAIN HILDENBOROUGH / SOURCE 3 ATCC 29579 / DSM 644 / NCIMB 8303); SOURCE 4 ORGANISM_TAXID: 882; SOURCE 5 STRAIN: HILDENBOROUGH / ATCC 29579 / DSM 644 / NCIMB 8303; SOURCE 6 GENE: HYSB, DVU_1917; SOURCE 7 EXPRESSION_SYSTEM: DESULFOVIBRIO VULGARIS STR. HILDENBOROUGH; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 882; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: DESULFOVIBRIO VULGARIS (STRAIN HILDENBOROUGH / SOURCE 11 ATCC 29579 / DSM 644 / NCIMB 8303); SOURCE 12 ORGANISM_TAXID: 882; SOURCE 13 STRAIN: HILDENBOROUGH / ATCC 29579 / DSM 644 / NCIMB 8303; SOURCE 14 GENE: HYSA, DVU_1918; SOURCE 15 EXPRESSION_SYSTEM: DESULFOVIBRIO VULGARIS STR. HILDENBOROUGH; SOURCE 16 EXPRESSION_SYSTEM_TAXID: 882 KEYWDS HYDROGENASE, SELENIUM, GAS CHANNELS, HIGH-PRESSURE DERIVATIZATION, KEYWDS 2 OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR S.ZACARIAS,A.TEMPORAO,P.CARPENTIER,P.VAN DER LINDEN,I.A.C.PEREIRA, AUTHOR 2 P.M.MATIAS REVDAT 4 24-JAN-24 6Z9O 1 REMARK REVDAT 3 30-SEP-20 6Z9O 1 JRNL REVDAT 2 16-SEP-20 6Z9O 1 JRNL REVDAT 1 09-SEP-20 6Z9O 0 JRNL AUTH S.ZACARIAS,A.TEMPORAO,P.CARPENTIER,P.VAN DER LINDEN, JRNL AUTH 2 I.A.C.PEREIRA,P.M.MATIAS JRNL TITL EXPLORING THE GAS ACCESS ROUTES IN A [NIFESE] HYDROGENASE JRNL TITL 2 USING CRYSTALS PRESSURIZED WITH KRYPTON AND OXYGEN. JRNL REF J.BIOL.INORG.CHEM. V. 25 863 2020 JRNL REFN ESSN 1432-1327 JRNL PMID 32865640 JRNL DOI 10.1007/S00775-020-01814-Y REMARK 2 REMARK 2 RESOLUTION. 1.53 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.18.2_3874 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.53 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.98 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.290 REMARK 3 COMPLETENESS FOR RANGE (%) : 66.0 REMARK 3 NUMBER OF REFLECTIONS : 137666 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.162 REMARK 3 R VALUE (WORKING SET) : 0.161 REMARK 3 FREE R VALUE : 0.185 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.840 REMARK 3 FREE R VALUE TEST SET COUNT : 6666 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 50.9800 - 4.7600 0.88 5813 303 0.1774 0.1985 REMARK 3 2 4.7600 - 3.7800 0.91 6063 305 0.1396 0.1784 REMARK 3 3 3.7800 - 3.3000 0.88 5781 331 0.1305 0.1368 REMARK 3 4 3.3000 - 3.0000 0.88 5862 293 0.1335 0.1807 REMARK 3 5 3.0000 - 2.7800 0.88 5779 316 0.1348 0.1547 REMARK 3 6 2.7800 - 2.6200 0.89 5901 285 0.1363 0.1636 REMARK 3 7 2.6200 - 2.4900 0.90 5968 249 0.1297 0.1537 REMARK 3 8 2.4900 - 2.3800 0.89 5854 310 0.1356 0.1678 REMARK 3 9 2.3800 - 2.2900 0.83 5483 285 0.1404 0.1690 REMARK 3 10 2.2900 - 2.2100 0.84 5592 303 0.1403 0.1676 REMARK 3 11 2.2100 - 2.1400 0.82 5456 254 0.1486 0.1631 REMARK 3 12 2.1400 - 2.0800 0.82 5430 283 0.1521 0.1651 REMARK 3 13 2.0800 - 2.0200 0.84 5502 329 0.1614 0.1805 REMARK 3 14 2.0200 - 1.9800 0.84 5595 261 0.1811 0.2047 REMARK 3 15 1.9800 - 1.9300 0.83 5428 254 0.1946 0.2163 REMARK 3 16 1.9300 - 1.8900 0.83 5558 289 0.2099 0.2207 REMARK 3 17 1.8900 - 1.8500 0.83 5549 265 0.2314 0.2343 REMARK 3 18 1.8500 - 1.8200 0.81 5256 279 0.2424 0.2672 REMARK 3 19 1.8200 - 1.7800 0.76 5076 263 0.2478 0.2857 REMARK 3 20 1.7800 - 1.7500 0.75 5002 227 0.2595 0.2965 REMARK 3 21 1.7500 - 1.7300 0.68 4452 248 0.2674 0.2811 REMARK 3 22 1.7300 - 1.7000 0.57 3827 192 0.2767 0.2947 REMARK 3 23 1.7000 - 1.6700 0.48 3131 142 0.2774 0.2846 REMARK 3 24 1.6700 - 1.6500 0.39 2614 119 0.2859 0.2818 REMARK 3 25 1.6500 - 1.6300 0.32 2020 141 0.2928 0.3165 REMARK 3 26 1.6300 - 1.6100 0.22 1495 78 0.3050 0.3464 REMARK 3 27 1.6100 - 1.5900 0.14 900 33 0.3081 0.3373 REMARK 3 28 1.5900 - 1.5700 0.07 451 19 0.2976 0.3335 REMARK 3 29 1.5700 - 1.5500 0.02 131 8 0.3462 0.3321 REMARK 3 30 1.5500 - 1.5300 0.00 31 2 0.3320 0.3022 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.132 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.597 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 21.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.61 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 6149 REMARK 3 ANGLE : 1.093 8383 REMARK 3 CHIRALITY : 0.053 913 REMARK 3 PLANARITY : 0.005 1085 REMARK 3 DIHEDRAL : 15.877 2301 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 13 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND ((RESID 5 THROUGH 46 ) OR (RESID 112 REMARK 3 THROUGH 162 ) OR (RESID 286 THROUGH 287)) REMARK 3 ORIGIN FOR THE GROUP (A): 7.1794 -29.4327 139.5246 REMARK 3 T TENSOR REMARK 3 T11: 0.1539 T22: 0.1474 REMARK 3 T33: 0.1105 T12: 0.0321 REMARK 3 T13: -0.0094 T23: -0.0117 REMARK 3 L TENSOR REMARK 3 L11: 1.9311 L22: 1.4680 REMARK 3 L33: 1.4508 L12: 0.1909 REMARK 3 L13: -0.1299 L23: -0.1840 REMARK 3 S TENSOR REMARK 3 S11: -0.0016 S12: 0.0101 S13: -0.0848 REMARK 3 S21: 0.0061 S22: 0.0015 S23: -0.0539 REMARK 3 S31: 0.1367 S32: 0.1919 S33: -0.0099 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 47 THROUGH 96 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.7083 -33.2818 126.9579 REMARK 3 T TENSOR REMARK 3 T11: 0.2387 T22: 0.2036 REMARK 3 T33: 0.1625 T12: 0.0575 REMARK 3 T13: 0.0040 T23: -0.0621 REMARK 3 L TENSOR REMARK 3 L11: 2.2391 L22: 1.6472 REMARK 3 L33: 1.4038 L12: 0.6940 REMARK 3 L13: 0.1314 L23: -0.4131 REMARK 3 S TENSOR REMARK 3 S11: -0.0091 S12: 0.1576 S13: -0.2048 REMARK 3 S21: -0.2213 S22: -0.0043 S23: -0.0999 REMARK 3 S31: 0.2813 S32: 0.1996 S33: 0.0133 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 97 THROUGH 111 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.2994 -39.3731 127.8417 REMARK 3 T TENSOR REMARK 3 T11: 0.2679 T22: 0.1666 REMARK 3 T33: 0.1948 T12: 0.0390 REMARK 3 T13: -0.0245 T23: -0.0838 REMARK 3 L TENSOR REMARK 3 L11: 4.0259 L22: 3.6831 REMARK 3 L33: 5.7100 L12: -0.0002 REMARK 3 L13: -2.8190 L23: -0.8068 REMARK 3 S TENSOR REMARK 3 S11: 0.0827 S12: 0.3161 S13: -0.3271 REMARK 3 S21: -0.2786 S22: -0.1159 S23: 0.1998 REMARK 3 S31: 0.5878 S32: -0.0912 S33: 0.0196 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 163 THROUGH 192 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.1605 -33.6664 149.9011 REMARK 3 T TENSOR REMARK 3 T11: 0.1974 T22: 0.2164 REMARK 3 T33: 0.1727 T12: 0.0317 REMARK 3 T13: -0.0093 T23: -0.0299 REMARK 3 L TENSOR REMARK 3 L11: 7.2751 L22: 5.4422 REMARK 3 L33: 1.3414 L12: -4.8640 REMARK 3 L13: 0.1627 L23: -0.9950 REMARK 3 S TENSOR REMARK 3 S11: -0.0891 S12: -0.1629 S13: -0.0348 REMARK 3 S21: 0.1518 S22: 0.0283 S23: -0.5135 REMARK 3 S31: 0.1811 S32: 0.1613 S33: 0.0275 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 193 THROUGH 242 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.9444 -21.8379 160.9749 REMARK 3 T TENSOR REMARK 3 T11: 0.1956 T22: 0.2245 REMARK 3 T33: 0.1736 T12: 0.0238 REMARK 3 T13: 0.0343 T23: 0.0048 REMARK 3 L TENSOR REMARK 3 L11: 1.4930 L22: 1.8969 REMARK 3 L33: 1.9234 L12: -1.1996 REMARK 3 L13: -0.1859 L23: -0.3246 REMARK 3 S TENSOR REMARK 3 S11: -0.2118 S12: -0.3237 S13: -0.0662 REMARK 3 S21: 0.3759 S22: 0.2279 S23: 0.2035 REMARK 3 S31: -0.0509 S32: -0.1008 S33: -0.0006 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND ((RESID 243 THROUGH 283 ) OR (RESID REMARK 3 284 THROUGH 285)) REMARK 3 ORIGIN FOR THE GROUP (A): -3.7717 -21.3691 153.6642 REMARK 3 T TENSOR REMARK 3 T11: 0.1382 T22: 0.1715 REMARK 3 T33: 0.1326 T12: 0.0298 REMARK 3 T13: 0.0143 T23: 0.0005 REMARK 3 L TENSOR REMARK 3 L11: 0.8160 L22: 2.2503 REMARK 3 L33: 2.2840 L12: 0.3599 REMARK 3 L13: 0.6810 L23: 0.3582 REMARK 3 S TENSOR REMARK 3 S11: -0.0797 S12: -0.1240 S13: -0.0434 REMARK 3 S21: 0.0624 S22: 0.0974 S23: 0.0516 REMARK 3 S31: -0.0191 S32: -0.1105 S33: -0.0099 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 14 THROUGH 49 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.0831 -23.1033 112.4720 REMARK 3 T TENSOR REMARK 3 T11: 0.1835 T22: 0.1459 REMARK 3 T33: 0.1351 T12: 0.0089 REMARK 3 T13: -0.0156 T23: -0.0401 REMARK 3 L TENSOR REMARK 3 L11: 2.4473 L22: 1.8505 REMARK 3 L33: 6.7070 L12: -0.4370 REMARK 3 L13: -0.6725 L23: -0.2178 REMARK 3 S TENSOR REMARK 3 S11: 0.0010 S12: 0.2067 S13: -0.0815 REMARK 3 S21: -0.1944 S22: -0.0405 S23: -0.0686 REMARK 3 S31: 0.2248 S32: -0.0603 S33: 0.0275 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND ((RESID 50 THROUGH 180 ) OR (RESID 433 REMARK 3 THROUGH 495 ) OR (RESID 500 THROUGH 504)) REMARK 3 ORIGIN FOR THE GROUP (A): 0.5372 -14.4577 129.8892 REMARK 3 T TENSOR REMARK 3 T11: 0.1687 T22: 0.1561 REMARK 3 T33: 0.1576 T12: 0.0058 REMARK 3 T13: -0.0136 T23: -0.0097 REMARK 3 L TENSOR REMARK 3 L11: 0.5224 L22: 0.6390 REMARK 3 L33: 0.8442 L12: -0.0380 REMARK 3 L13: 0.0076 L23: 0.0082 REMARK 3 S TENSOR REMARK 3 S11: -0.0024 S12: 0.0482 S13: 0.0077 REMARK 3 S21: -0.0660 S22: 0.0072 S23: 0.0064 REMARK 3 S31: -0.0369 S32: 0.0392 S33: -0.0041 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 181 THROUGH 219 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.3631 -3.5872 146.1902 REMARK 3 T TENSOR REMARK 3 T11: 0.1593 T22: 0.1281 REMARK 3 T33: 0.1330 T12: 0.0356 REMARK 3 T13: -0.0423 T23: -0.0215 REMARK 3 L TENSOR REMARK 3 L11: 3.0653 L22: 0.6163 REMARK 3 L33: 2.6662 L12: 0.1498 REMARK 3 L13: -2.0030 L23: -0.1575 REMARK 3 S TENSOR REMARK 3 S11: 0.0402 S12: -0.1281 S13: 0.2679 REMARK 3 S21: 0.1203 S22: 0.0485 S23: 0.0401 REMARK 3 S31: -0.2777 S32: 0.0640 S33: -0.0901 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 220 THROUGH 262 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.0315 -1.4558 123.2062 REMARK 3 T TENSOR REMARK 3 T11: 0.2138 T22: 0.0247 REMARK 3 T33: 0.1621 T12: 0.0110 REMARK 3 T13: -0.0187 T23: 0.0459 REMARK 3 L TENSOR REMARK 3 L11: 3.0334 L22: 1.0168 REMARK 3 L33: 3.5908 L12: 0.3701 REMARK 3 L13: -0.4511 L23: 0.2273 REMARK 3 S TENSOR REMARK 3 S11: 0.0306 S12: 0.0946 S13: 0.1510 REMARK 3 S21: -0.0601 S22: 0.0007 S23: -0.0370 REMARK 3 S31: -0.2775 S32: -0.0561 S33: -0.0744 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 263 THROUGH 329 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.9715 -17.3233 118.6882 REMARK 3 T TENSOR REMARK 3 T11: 0.1646 T22: 0.2153 REMARK 3 T33: 0.1658 T12: 0.0082 REMARK 3 T13: -0.0697 T23: -0.0194 REMARK 3 L TENSOR REMARK 3 L11: 1.2434 L22: 3.2307 REMARK 3 L33: 0.9292 L12: -0.0291 REMARK 3 L13: -0.1067 L23: -0.5376 REMARK 3 S TENSOR REMARK 3 S11: 0.0428 S12: 0.1580 S13: -0.1390 REMARK 3 S21: -0.1950 S22: 0.0427 S23: 0.2800 REMARK 3 S31: 0.0806 S32: -0.2041 S33: -0.0872 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 330 THROUGH 395 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.7459 3.6913 124.0072 REMARK 3 T TENSOR REMARK 3 T11: 0.2421 T22: 0.1264 REMARK 3 T33: 0.2083 T12: -0.0185 REMARK 3 T13: -0.0131 T23: 0.0178 REMARK 3 L TENSOR REMARK 3 L11: 1.8945 L22: 0.7591 REMARK 3 L33: 2.8931 L12: -0.4992 REMARK 3 L13: -1.1344 L23: -0.2677 REMARK 3 S TENSOR REMARK 3 S11: 0.0438 S12: 0.1479 S13: 0.2362 REMARK 3 S21: -0.0739 S22: -0.0291 S23: -0.0459 REMARK 3 S31: -0.2783 S32: 0.0589 S33: -0.0353 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 396 THROUGH 432 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.9825 -10.1097 139.8047 REMARK 3 T TENSOR REMARK 3 T11: 0.1460 T22: 0.1230 REMARK 3 T33: 0.1970 T12: 0.0676 REMARK 3 T13: -0.0088 T23: 0.0260 REMARK 3 L TENSOR REMARK 3 L11: 2.8795 L22: 0.6381 REMARK 3 L33: 2.1276 L12: 0.2611 REMARK 3 L13: -0.5415 L23: 0.1192 REMARK 3 S TENSOR REMARK 3 S11: -0.1040 S12: 0.0953 S13: -0.0686 REMARK 3 S21: -0.0230 S22: -0.0024 S23: 0.1822 REMARK 3 S31: -0.0823 S32: -0.3001 S33: 0.1083 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6Z9O COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 05-JUN-20. REMARK 100 THE DEPOSITION ID IS D_1292109175. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-APR-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID30B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97625 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : STARANISO REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 137666 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.530 REMARK 200 RESOLUTION RANGE LOW (A) : 50.980 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 75.7 REMARK 200 DATA REDUNDANCY : 2.500 REMARK 200 R MERGE (I) : 0.07700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.53 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.67 REMARK 200 COMPLETENESS FOR SHELL (%) : 17.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.72800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5JSK REMARK 200 REMARK 200 REMARK: THIN PLATES REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.90 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.05 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG 1500 (W/V) AND 0.1 MM TRIS-HCL REMARK 280 PH 7.6, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 53.04800 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 31.75150 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 53.04800 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 31.75150 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9630 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24030 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -133.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 493 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 1 REMARK 465 THR A 2 REMARK 465 LEU A 3 REMARK 465 THR A 4 REMARK 465 GLY B 12 REMARK 465 ALA B 13 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 6 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU B 167 HH21 ARG B 170 1.52 REMARK 500 OE2 GLU B 400 O HOH B 601 2.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 46 109.59 -160.83 REMARK 500 GLU A 134 24.25 -146.83 REMARK 500 LYS A 251 -173.04 65.44 REMARK 500 ALA A 263 -102.51 -156.44 REMARK 500 CSD B 75 119.18 -163.81 REMARK 500 LYS B 145 74.76 -117.23 REMARK 500 HIS B 185 81.12 76.24 REMARK 500 LYS B 220 -53.94 -121.39 REMARK 500 PHE B 251 81.22 64.27 REMARK 500 TYR B 313 21.21 -143.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A 303 FE1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 18 SG REMARK 620 2 SF4 A 303 S2 99.6 REMARK 620 3 SF4 A 303 S3 128.9 107.7 REMARK 620 4 SF4 A 303 S4 109.8 104.6 104.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 6ML A 304 FE1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 18 SG REMARK 620 2 6ML A 304 O12 102.6 REMARK 620 3 6ML A 304 S3 119.1 94.7 REMARK 620 4 6ML A 304 S2 128.3 102.3 103.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A 303 FE4 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 21 SG REMARK 620 2 SF4 A 303 S1 115.4 REMARK 620 3 SF4 A 303 S2 119.1 104.0 REMARK 620 4 SF4 A 303 S3 107.3 102.6 106.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 6ML A 304 FE2 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 77 OE2 REMARK 620 2 6ML A 304 O12 88.7 REMARK 620 3 6ML A 304 O24 108.0 100.5 REMARK 620 4 6ML A 304 S1 143.5 99.8 105.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A 303 FE2 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 121 SG REMARK 620 2 SF4 A 303 S1 106.4 REMARK 620 3 SF4 A 303 S3 137.7 103.2 REMARK 620 4 SF4 A 303 S4 96.1 106.4 103.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 6ML A 304 FE4 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 121 SG REMARK 620 2 6ML A 304 O24 118.6 REMARK 620 3 6ML A 304 S3 101.3 96.3 REMARK 620 4 6ML A 304 S4 135.9 95.2 102.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A 303 FE3 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 159 SG REMARK 620 2 SF4 A 303 S1 115.2 REMARK 620 3 SF4 A 303 S2 124.8 105.4 REMARK 620 4 SF4 A 303 S4 99.7 105.9 103.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 6ML A 304 FE3 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 159 SG REMARK 620 2 6ML A 304 S3 136.3 REMARK 620 3 6ML A 304 S2 110.5 101.3 REMARK 620 4 6ML A 304 S4 108.2 101.1 89.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A 301 FE2 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 208 ND1 REMARK 620 2 SF4 A 301 S1 101.5 REMARK 620 3 SF4 A 301 S3 122.3 106.1 REMARK 620 4 SF4 A 301 S4 117.4 105.7 102.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A 301 FE4 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 211 SG REMARK 620 2 SF4 A 301 S1 114.0 REMARK 620 3 SF4 A 301 S2 119.3 103.5 REMARK 620 4 SF4 A 301 S3 108.5 106.1 104.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A 301 FE3 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 232 SG REMARK 620 2 SF4 A 301 S1 119.5 REMARK 620 3 SF4 A 301 S2 119.7 103.3 REMARK 620 4 SF4 A 301 S4 102.6 106.0 104.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A 301 FE1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 238 SG REMARK 620 2 SF4 A 301 S2 117.5 REMARK 620 3 SF4 A 301 S3 110.2 104.8 REMARK 620 4 SF4 A 301 S4 116.2 103.8 102.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A 302 FE4 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 247 SG REMARK 620 2 SF4 A 302 S1 115.5 REMARK 620 3 SF4 A 302 S2 103.7 105.3 REMARK 620 4 SF4 A 302 S3 124.1 104.1 101.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A 302 FE3 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 259 SG REMARK 620 2 SF4 A 302 S1 110.3 REMARK 620 3 SF4 A 302 S2 116.3 105.9 REMARK 620 4 SF4 A 302 S4 113.9 105.2 104.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A 302 FE2 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 265 SG REMARK 620 2 SF4 A 302 S1 112.0 REMARK 620 3 SF4 A 302 S3 118.7 104.2 REMARK 620 4 SF4 A 302 S4 111.4 105.4 104.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A 302 FE1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 268 SG REMARK 620 2 SF4 A 302 S2 107.2 REMARK 620 3 SF4 A 302 S3 121.4 102.6 REMARK 620 4 SF4 A 302 S4 114.7 104.1 104.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE2 B 503 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 56 OE2 REMARK 620 2 ILE B 441 O 94.2 REMARK 620 3 HIS B 495 NE2 91.1 89.7 REMARK 620 4 HOH B 608 O 85.6 93.0 175.9 REMARK 620 5 HOH B 613 O 91.8 173.8 91.7 86.0 REMARK 620 6 HOH B 616 O 174.4 86.7 94.4 88.8 87.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI B 502 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 75 SG REMARK 620 2 CSD B 75 SG 18.5 REMARK 620 3 CYS B 78 SG 91.3 106.0 REMARK 620 4 CYS B 492 SG 113.9 104.3 81.2 REMARK 620 5 H2S B 504 S 94.0 102.3 99.3 152.1 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FCO B 501 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 78 SG REMARK 620 2 FCO B 501 C1 161.8 REMARK 620 3 FCO B 501 C2 91.5 91.3 REMARK 620 4 FCO B 501 C3 108.2 89.3 97.0 REMARK 620 5 CYS B 492 SG 82.6 91.1 167.8 95.0 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SF4 A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SF4 A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SF4 A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 6ML A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OXY A 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OXY A 307 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FCO B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NI B 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FE2 B 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue H2S B 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OXY B 506 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OXY B 507 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OXY B 508 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OXY B 509 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residues H2S B 504 and SEC B REMARK 800 489 DBREF 6Z9O A 1 283 UNP Q72AS4 Q72AS4_DESVH 35 317 DBREF 6Z9O B 12 495 UNP Q72AS3 Q72AS3_DESVH 12 495 SEQADV 6Z9O ALA B 491 UNP Q72AS3 GLY 491 ENGINEERED MUTATION SEQRES 1 A 283 GLY THR LEU THR GLY GLU ARG PRO PRO VAL PHE TRP LEU SEQRES 2 A 283 GLN GLY GLN GLY CYS THR GLY CYS SER VAL THR LEU LEU SEQRES 3 A 283 ASN SER VAL HIS PRO SER ILE ALA ASP VAL LEU LEU LYS SEQRES 4 A 283 VAL ILE SER LEU GLU PHE HIS PRO THR VAL MET ALA TRP SEQRES 5 A 283 GLU GLY GLU HIS ALA ILE GLU HIS MET ARG LYS VAL ALA SEQRES 6 A 283 GLU LYS PHE LYS GLY LYS PHE PHE LEU VAL ILE GLU GLY SEQRES 7 A 283 SER VAL PRO VAL GLU ALA ASP GLY LYS TYR CYS ILE ILE SEQRES 8 A 283 GLY GLU ALA ASN HIS HIS GLU ILE SER MET VAL ASP ALA SEQRES 9 A 283 LEU LYS GLU PHE GLY PRO ASN ALA ALA ALA VAL LEU ALA SEQRES 10 A 283 VAL GLY THR CYS ALA ALA TYR GLY GLY ILE PRO ALA ALA SEQRES 11 A 283 GLU GLY SER GLU THR GLY ALA THR ALA VAL SER LYS PHE SEQRES 12 A 283 LEU GLY ASP ASN GLY ILE LYS THR PRO VAL VAL ASN ILE SEQRES 13 A 283 PRO GLY CYS PRO PRO HIS PRO ASP TRP ILE VAL GLY THR SEQRES 14 A 283 VAL VAL LEU ALA LEU ASP ALA ILE LYS LYS ASN GLY LEU SEQRES 15 A 283 GLU GLY GLY LEU ALA GLU VAL VAL LYS VAL LEU ASP SER SEQRES 16 A 283 ASP GLY ARG PRO THR PRO PHE PHE GLY ARG ASN ILE HIS SEQRES 17 A 283 GLU ASN CYS PRO TYR LEU ASP LYS TYR ASP GLU GLY VAL SEQRES 18 A 283 MET SER ALA THR PHE THR ASP LYS VAL GLY CYS ARG TYR SEQRES 19 A 283 ASP LEU GLY CYS LYS GLY PRO MET THR MET ALA ASP CYS SEQRES 20 A 283 PHE GLU ARG LYS TRP ASN GLY GLY VAL ASN TRP CYS VAL SEQRES 21 A 283 GLN ASN ALA VAL CYS ILE GLY CYS VAL GLU PRO ASP PHE SEQRES 22 A 283 PRO ASP GLY LYS SER PRO PHE TYR GLN ALA SEQRES 1 B 484 GLY ALA THR GLY ARG THR THR ILE ALA ILE ASP PRO VAL SEQRES 2 B 484 THR ARG ILE GLU GLY HIS LEU LYS ALA GLU VAL VAL VAL SEQRES 3 B 484 GLU ASN GLY LYS VAL VAL ASP ALA ARG LEU SER GLY GLY SEQRES 4 B 484 MET TYR ARG GLY PHE GLU THR ILE LEU ARG GLY ARG ASP SEQRES 5 B 484 PRO ARG ASP ALA SER GLN ILE VAL GLN ARG ILE CYS GLY SEQRES 6 B 484 VAL CYS PRO THR ALA HIS SER THR ALA SER VAL LEU ALA SEQRES 7 B 484 LEU ASP GLU ALA PHE GLY ALA LYS VAL PRO ASN ASN GLY SEQRES 8 B 484 ARG ILE THR ARG ASN LEU ILE PHE GLY ALA ASN TYR LEU SEQRES 9 B 484 GLN SER HIS ILE LEU HIS PHE TYR HIS LEU SER ALA GLN SEQRES 10 B 484 ASP PHE VAL GLN GLY PRO ASP THR ALA PRO PHE VAL PRO SEQRES 11 B 484 ARG PHE PRO LYS SER ASP LEU ARG LEU SER LYS GLU LEU SEQRES 12 B 484 ASN LYS ALA GLY VAL ASP GLN TYR ILE GLU ALA LEU GLU SEQRES 13 B 484 VAL ARG ARG ILE CYS HIS GLU MET VAL ALA LEU PHE GLY SEQRES 14 B 484 GLY ARG MET PRO HIS VAL GLN GLY GLN VAL VAL GLY GLY SEQRES 15 B 484 ALA THR GLU ILE PRO THR LYS GLU LYS LEU VAL GLU TYR SEQRES 16 B 484 ALA ALA ARG PHE LYS LYS VAL ARG ASP PHE VAL GLU GLN SEQRES 17 B 484 LYS TYR VAL PRO VAL VAL TYR THR ILE GLY SER LYS TYR SEQRES 18 B 484 LYS ASP MET PHE LYS VAL GLY GLN GLY PHE LYS ALA ALA SEQRES 19 B 484 LEU CYS VAL GLY ALA PHE PRO LEU ASP ASN SER GLY LYS SEQRES 20 B 484 LYS HIS LEU PHE MET PRO GLY VAL TYR ALA LYS GLY LYS SEQRES 21 B 484 ASP MET PRO PHE ASP PRO SER LYS ILE LYS GLU TYR VAL SEQRES 22 B 484 LYS TYR SER TRP PHE ALA GLU GLU THR THR GLY LEU ASN SEQRES 23 B 484 TYR LYS GLU GLY LYS THR ILE PRO ALA PRO ASP LYS ALA SEQRES 24 B 484 GLY ALA TYR SER PHE VAL LYS ALA PRO ARG TYR ASP GLY SEQRES 25 B 484 LEU SER LEU GLU VAL GLY PRO LEU ALA ARG MET TRP VAL SEQRES 26 B 484 ASN ASN PRO GLU LEU SER PRO VAL GLY LYS LYS LEU LEU SEQRES 27 B 484 LYS ASP LEU PHE GLY ILE SER ALA LYS LYS PHE ARG ASP SEQRES 28 B 484 LEU GLY GLU GLU ALA ALA PHE SER LEU MET GLY ARG HIS SEQRES 29 B 484 VAL ALA ARG ALA GLU GLU THR TYR TYR MET LEU GLY ALA SEQRES 30 B 484 ILE GLU GLY TRP LEU LYS GLU ILE LYS ALA GLY GLU ASP SEQRES 31 B 484 THR VAL VAL MET PRO ALA VAL PRO ALA SER ALA GLU GLY SEQRES 32 B 484 THR GLY PHE THR GLU ALA PRO ARG GLY SER LEU LEU HIS SEQRES 33 B 484 TYR VAL LYS VAL LYS ASP SER LYS ILE ASP ASN TYR GLN SEQRES 34 B 484 ILE VAL SER ALA SER LEU TRP ASN CYS ASN PRO ARG ASP SEQRES 35 B 484 ASP MET GLY GLN ARG GLY ALA VAL GLU GLU ALA LEU ILE SEQRES 36 B 484 GLY ILE PRO VAL ASP ASP ILE GLN ASN PRO VAL ASN VAL SEQRES 37 B 484 ALA ARG LEU ILE ARG ALA PHE ASP PRO SEC LEU ALA CYS SEQRES 38 B 484 ALA VAL HIS HET CSD B 75 8 HET SF4 A 301 8 HET SF4 A 302 8 HET SF4 A 303 8 HET 6ML A 304 10 HET GOL A 305 14 HET OXY A 306 2 HET OXY A 307 2 HET FCO B 501 7 HET NI B 502 1 HET FE2 B 503 1 HET H2S B 504 1 HET H2S B 505 1 HET OXY B 506 2 HET OXY B 507 2 HET OXY B 508 2 HET OXY B 509 2 HETNAM CSD 3-SULFINOALANINE HETNAM SF4 IRON/SULFUR CLUSTER HETNAM 6ML OXYGEN-DAMAGED SF4 HETNAM GOL GLYCEROL HETNAM OXY OXYGEN MOLECULE HETNAM FCO CARBONMONOXIDE-(DICYANO) IRON HETNAM NI NICKEL (II) ION HETNAM FE2 FE (II) ION HETNAM H2S HYDROSULFURIC ACID HETSYN CSD S-CYSTEINESULFINIC ACID; S-SULFINOCYSTEINE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL HETSYN H2S HYDROGEN SULFIDE FORMUL 2 CSD C3 H7 N O4 S FORMUL 3 SF4 3(FE4 S4) FORMUL 6 6ML FE4 O2 S4 FORMUL 7 GOL C3 H8 O3 FORMUL 8 OXY 6(O2) FORMUL 10 FCO C3 FE N2 O FORMUL 11 NI NI 2+ FORMUL 12 FE2 FE 2+ FORMUL 13 H2S 2(H2 S) FORMUL 19 HOH *279(H2 O) HELIX 1 AA1 THR A 19 ASN A 27 1 9 HELIX 2 AA2 SER A 32 VAL A 40 1 9 HELIX 3 AA3 GLU A 53 PHE A 68 1 16 HELIX 4 AA4 GLU A 83 LYS A 87 5 5 HELIX 5 AA5 MET A 101 GLY A 109 1 9 HELIX 6 AA6 GLY A 119 GLY A 125 1 7 HELIX 7 AA7 GLY A 126 ALA A 130 5 5 HELIX 8 AA8 ALA A 139 ASN A 147 1 9 HELIX 9 AA9 HIS A 162 VAL A 192 1 31 HELIX 10 AB1 PRO A 199 GLY A 204 1 6 HELIX 11 AB2 ILE A 207 CYS A 211 5 5 HELIX 12 AB3 TYR A 213 GLY A 220 1 8 HELIX 13 AB4 LYS A 239 THR A 243 5 5 HELIX 14 AB5 ASP A 246 LYS A 251 1 6 HELIX 15 AB6 TRP A 258 ALA A 263 1 6 HELIX 16 AB7 PRO A 274 SER A 278 5 5 HELIX 17 AB8 GLY B 54 LEU B 59 1 6 HELIX 18 AB9 ASP B 63 ARG B 65 5 3 HELIX 19 AC1 ASP B 66 VAL B 71 1 6 HELIX 20 AC2 GLN B 72 CYS B 75 5 4 HELIX 21 AC3 CYS B 78 GLY B 95 1 18 HELIX 22 AC4 PRO B 99 LEU B 125 1 27 HELIX 23 AC5 SER B 126 PHE B 130 5 5 HELIX 24 AC6 SER B 151 GLY B 181 1 31 HELIX 25 AC7 THR B 199 LYS B 220 1 22 HELIX 26 AC8 LYS B 220 TYR B 232 1 13 HELIX 27 AC9 LYS B 233 LYS B 237 5 5 HELIX 28 AD1 ASP B 276 SER B 278 5 3 HELIX 29 AD2 ALA B 290 THR B 294 5 5 HELIX 30 AD3 ASN B 297 GLY B 301 5 5 HELIX 31 AD4 GLY B 329 ASN B 338 1 10 HELIX 32 AD5 SER B 342 GLY B 354 1 13 HELIX 33 AD6 LYS B 359 LEU B 363 5 5 HELIX 34 AD7 GLY B 364 PHE B 369 1 6 HELIX 35 AD8 SER B 370 ILE B 396 1 27 HELIX 36 AD9 SER B 443 CYS B 449 1 7 HELIX 37 AE1 GLY B 459 LEU B 465 1 7 HELIX 38 AE2 VAL B 477 PHE B 486 1 10 HELIX 39 AE3 SEC B 489 HIS B 495 1 7 SHEET 1 AA1 5 SER A 42 PHE A 45 0 SHEET 2 AA1 5 PRO A 9 GLN A 14 1 N TRP A 12 O PHE A 45 SHEET 3 AA1 5 PHE A 72 GLU A 77 1 O VAL A 75 N LEU A 13 SHEET 4 AA1 5 ALA A 112 VAL A 118 1 O ALA A 113 N PHE A 72 SHEET 5 AA1 5 VAL A 153 ILE A 156 1 O ILE A 156 N ALA A 117 SHEET 1 AA2 2 VAL A 80 PRO A 81 0 SHEET 2 AA2 2 ALA A 137 THR A 138 -1 O THR A 138 N VAL A 80 SHEET 1 AA3 2 ILE A 90 ALA A 94 0 SHEET 2 AA3 2 HIS A 97 SER A 100 -1 O ILE A 99 N GLY A 92 SHEET 1 AA4 3 ARG B 16 ILE B 21 0 SHEET 2 AA4 3 LEU B 31 GLU B 38 -1 O ALA B 33 N ILE B 21 SHEET 3 AA4 3 LYS B 41 GLY B 49 -1 O VAL B 43 N VAL B 36 SHEET 1 AA5 2 GLN B 189 VAL B 190 0 SHEET 2 AA5 2 GLY B 193 ALA B 194 -1 O GLY B 193 N VAL B 190 SHEET 1 AA6 3 ALA B 245 CYS B 247 0 SHEET 2 AA6 3 GLY B 265 ALA B 268 -1 O TYR B 267 N ALA B 245 SHEET 3 AA6 3 LYS B 271 MET B 273 -1 O MET B 273 N VAL B 266 SHEET 1 AA7 2 ALA B 250 PRO B 252 0 SHEET 2 AA7 2 HIS B 260 PHE B 262 -1 O LEU B 261 N PHE B 251 SHEET 1 AA8 2 ILE B 280 TYR B 283 0 SHEET 2 AA8 2 ALA B 318 TYR B 321 -1 O ALA B 318 N TYR B 283 SHEET 1 AA9 3 ALA B 412 ALA B 420 0 SHEET 2 AA9 3 GLY B 423 LYS B 432 -1 O VAL B 431 N ALA B 412 SHEET 3 AA9 3 LYS B 435 VAL B 442 -1 O ASP B 437 N LYS B 430 LINK SG BCYS A 21 S1 B6ML A 304 1555 1555 2.03 LINK C ILE B 74 N BCSD B 75 1555 1555 1.33 LINK C BCSD B 75 N GLY B 76 1555 1555 1.33 LINK SE ASEC B 489 S AH2S B 504 1555 1555 2.17 LINK SG CYS A 18 FE1 ASF4 A 303 1555 1555 2.43 LINK SG CYS A 18 FE1 B6ML A 304 1555 1555 2.06 LINK SG ACYS A 21 FE4 ASF4 A 303 1555 1555 2.34 LINK OE2BGLU A 77 FE2 B6ML A 304 1555 1555 2.00 LINK SG CYS A 121 FE2 ASF4 A 303 1555 1555 2.50 LINK SG CYS A 121 FE4 B6ML A 304 1555 1555 2.06 LINK SG CYS A 159 FE3 ASF4 A 303 1555 1555 2.39 LINK SG CYS A 159 FE3 B6ML A 304 1555 1555 2.19 LINK ND1 HIS A 208 FE2 SF4 A 301 1555 1555 2.08 LINK SG CYS A 211 FE4 SF4 A 301 1555 1555 2.25 LINK SG CYS A 232 FE3 SF4 A 301 1555 1555 2.27 LINK SG CYS A 238 FE1 SF4 A 301 1555 1555 2.30 LINK SG CYS A 247 FE4 SF4 A 302 1555 1555 2.28 LINK SG CYS A 259 FE3 SF4 A 302 1555 1555 2.28 LINK SG CYS A 265 FE2 SF4 A 302 1555 1555 2.28 LINK SG CYS A 268 FE1 SF4 A 302 1555 1555 2.27 LINK OE2 GLU B 56 FE FE2 B 503 1555 1555 2.17 LINK SG ACYS B 75 NI NI B 502 1555 1555 2.30 LINK SG BCSD B 75 NI NI B 502 1555 1555 2.36 LINK SG CYS B 78 FE FCO B 501 1555 1555 2.26 LINK SG CYS B 78 NI NI B 502 1555 1555 2.36 LINK O ILE B 441 FE FE2 B 503 1555 1555 2.21 LINK SG CYS B 492 FE FCO B 501 1555 1555 2.30 LINK SG CYS B 492 NI NI B 502 1555 1555 2.27 LINK NE2 HIS B 495 FE FE2 B 503 1555 1555 2.17 LINK NI NI B 502 S AH2S B 504 1555 1555 2.01 LINK FE FE2 B 503 O HOH B 608 1555 1555 2.20 LINK FE FE2 B 503 O HOH B 613 1555 1555 2.28 LINK FE FE2 B 503 O HOH B 616 1555 1555 2.20 CISPEP 1 HIS A 30 PRO A 31 0 0.11 CISPEP 2 CYS A 159 PRO A 160 0 -0.87 CISPEP 3 PHE A 273 PRO A 274 0 5.80 CISPEP 4 SER A 278 PRO A 279 0 -2.49 CISPEP 5 ASP B 22 PRO B 23 0 5.19 CISPEP 6 ALA B 137 PRO B 138 0 7.32 CISPEP 7 VAL B 140 PRO B 141 0 -6.65 CISPEP 8 MET B 183 PRO B 184 0 -2.99 SITE 1 AC1 8 HIS A 208 CYS A 211 TYR A 213 LEU A 214 SITE 2 AC1 8 CYS A 232 ARG A 233 CYS A 238 VAL A 260 SITE 1 AC2 8 THR A 243 CYS A 247 TRP A 252 CYS A 259 SITE 2 AC2 8 CYS A 265 ILE A 266 CYS A 268 ARG B 182 SITE 1 AC3 12 GLY A 17 CYS A 18 CYS A 21 GLU A 77 SITE 2 AC3 12 GLY A 119 THR A 120 CYS A 121 GLY A 158 SITE 3 AC3 12 CYS A 159 6ML A 304 ARG B 73 HIS B 185 SITE 1 AC4 13 CYS A 18 THR A 19 GLY A 20 CYS A 21 SITE 2 AC4 13 GLU A 77 THR A 120 CYS A 121 GLY A 158 SITE 3 AC4 13 CYS A 159 PRO A 160 SF4 A 303 HOH A 413 SITE 4 AC4 13 HIS B 185 SITE 1 AC5 8 TYR A 124 GLY A 126 ALA A 130 ASP A 272 SITE 2 AC5 8 PHE A 273 PRO A 274 ASP A 275 HOH A 431 SITE 1 AC6 2 LEU A 26 HIS A 46 SITE 1 AC7 2 VAL A 10 PHE A 73 SITE 1 AC8 11 CYS B 78 HIS B 82 ALA B 420 PRO B 421 SITE 2 AC8 11 ARG B 422 ALA B 444 SER B 445 SEC B 489 SITE 3 AC8 11 CYS B 492 NI B 502 H2S B 504 SITE 1 AC9 7 CSD B 75 CYS B 75 CYS B 78 SEC B 489 SITE 2 AC9 7 CYS B 492 FCO B 501 H2S B 504 SITE 1 AD1 6 GLU B 56 ILE B 441 HIS B 495 HOH B 608 SITE 2 AD1 6 HOH B 613 HOH B 616 SITE 1 AD2 6 CYS B 78 THR B 80 ALA B 81 PHE B 110 SITE 2 AD2 6 ASN B 113 PRO B 421 SITE 1 AD3 3 GLN B 128 GLY B 133 TYR B 162 SITE 1 AD4 3 ALA A 34 LEU A 38 ILE B 163 SITE 1 AD5 3 PHE B 236 PHE B 353 ILE B 355 SITE 1 AD6 2 LEU A 37 TYR B 162 SITE 1 AD7 14 GLU B 28 CSD B 75 CYS B 75 CYS B 78 SITE 2 AD7 14 ARG B 422 SER B 445 ASP B 487 PRO B 488 SITE 3 AD7 14 LEU B 490 ALA B 491 CYS B 492 ALA B 493 SITE 4 AD7 14 FCO B 501 NI B 502 CRYST1 106.096 63.503 109.942 90.00 104.74 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009425 0.000000 0.002480 0.00000 SCALE2 0.000000 0.015747 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009405 0.00000