HEADER OXIDOREDUCTASE 14-JUN-20 6ZDE TITLE 17BETA-HYDROXYSTEROID DEHYDROGENASE TYPE 14 VARIANT S205 IN COMPLEX TITLE 2 WITH PENTAFLUOROPHENOL COMPND MOL_ID: 1; COMPND 2 MOLECULE: 17-BETA-HYDROXYSTEROID DEHYDROGENASE 14; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: 17-BETA-HSD 14,17-BETA-HYDROXYSTEROID DEHYDROGENASE DHRS10, COMPND 5 DEHYDROGENASE/REDUCTASE SDR FAMILY MEMBER 10,RETINAL SHORT-CHAIN COMPND 6 DEHYDROGENASE/REDUCTASE RETSDR3,SHORT CHAIN DEHYDROGENASE/REDUCTASE COMPND 7 FAMILY 47C MEMBER 1; COMPND 8 EC: 1.1.1.-; COMPND 9 ENGINEERED: YES; COMPND 10 OTHER_DETAILS: NATURAL VARIANT S205 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: HSD17B14, DHRS10, SDR3, SDR47C1, UNQ502/PRO474; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI 'BL21-GOLD(DE3)PLYSS AG'; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 866768 KEYWDS INHIBITOR COMPLEX, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR M.J.BADRAN,A.HEINE,G.KLEBE REVDAT 2 24-JAN-24 6ZDE 1 REMARK REVDAT 1 13-JAN-21 6ZDE 0 JRNL AUTH M.J.BADRAN,A.HEINE,G.KLEBE JRNL TITL 17BETA-HYDROXYSTEROID DEHYDROGENASE TYPE 14 VARIANT S205 IN JRNL TITL 2 COMPLEX WITH PENTAFLUOROPHENOL JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.87 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.16_3549 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.87 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.65 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.370 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 23585 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.166 REMARK 3 R VALUE (WORKING SET) : 0.164 REMARK 3 FREE R VALUE : 0.191 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1179 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.6500 - 3.7400 1.00 2963 155 0.1567 0.1850 REMARK 3 2 3.7400 - 2.9700 1.00 2835 149 0.1715 0.1737 REMARK 3 3 2.9700 - 2.5900 1.00 2795 148 0.1724 0.2219 REMARK 3 4 2.5900 - 2.3600 1.00 2800 147 0.1661 0.1800 REMARK 3 5 2.3600 - 2.1900 1.00 2768 146 0.1571 0.1718 REMARK 3 6 2.1900 - 2.0600 1.00 2743 144 0.1513 0.2000 REMARK 3 7 2.0600 - 1.9500 1.00 2771 146 0.1649 0.2157 REMARK 3 8 1.9500 - 1.8700 1.00 2731 144 0.1793 0.2518 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.142 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.557 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 22.54 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 23.84 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 1962 REMARK 3 ANGLE : 0.844 2686 REMARK 3 CHIRALITY : 0.056 311 REMARK 3 PLANARITY : 0.007 370 REMARK 3 DIHEDRAL : 19.482 1178 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6ZDE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 15-JUN-20. REMARK 100 THE DEPOSITION ID IS D_1292109367. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-JUN-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 - 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9184 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23603 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.870 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 13.00 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 24.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.87 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.98 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5ICM REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.41 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.43 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG6000 20% W/V HEPES 0.1 M DMSO 2.5% REMARK 280 GAMMA-CYCLODEXTRIN 5 MM, PH 7.1, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 291.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z REMARK 290 4555 Y,-X,Z REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 9555 X+1/2,Y+1/2,Z+1/2 REMARK 290 10555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 11555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 12555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 13555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 14555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 15555 Y+1/2,X+1/2,-Z+1/2 REMARK 290 16555 -Y+1/2,-X+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 45.62550 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 45.62550 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 66.53000 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 45.62550 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 45.62550 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 66.53000 REMARK 290 SMTRY1 11 0.000000 -1.000000 0.000000 45.62550 REMARK 290 SMTRY2 11 1.000000 0.000000 0.000000 45.62550 REMARK 290 SMTRY3 11 0.000000 0.000000 1.000000 66.53000 REMARK 290 SMTRY1 12 0.000000 1.000000 0.000000 45.62550 REMARK 290 SMTRY2 12 -1.000000 0.000000 0.000000 45.62550 REMARK 290 SMTRY3 12 0.000000 0.000000 1.000000 66.53000 REMARK 290 SMTRY1 13 -1.000000 0.000000 0.000000 45.62550 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 45.62550 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 66.53000 REMARK 290 SMTRY1 14 1.000000 0.000000 0.000000 45.62550 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 45.62550 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 66.53000 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 45.62550 REMARK 290 SMTRY2 15 1.000000 0.000000 0.000000 45.62550 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 66.53000 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 45.62550 REMARK 290 SMTRY2 16 -1.000000 0.000000 0.000000 45.62550 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 66.53000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 19500 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 31770 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -186.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 91.25100 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 4 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 0.000000 -1.000000 0.000000 91.25100 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 453 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 535 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 548 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 THR A 3 REMARK 465 GLY A 4 REMARK 465 ALA A 257 REMARK 465 SER A 258 REMARK 465 ARG A 259 REMARK 465 SER A 260 REMARK 465 THR A 261 REMARK 465 PRO A 262 REMARK 465 VAL A 263 REMARK 465 ASP A 264 REMARK 465 ALA A 265 REMARK 465 PRO A 266 REMARK 465 ASP A 267 REMARK 465 ILE A 268 REMARK 465 PRO A 269 REMARK 465 SER A 270 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 6 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 47 NH1 NH2 REMARK 470 GLU A 66 CD OE1 OE2 REMARK 470 LYS A 70 CE NZ REMARK 470 ARG A 98 CZ NH1 NH2 REMARK 470 GLN A 133 OE1 NE2 REMARK 470 ARG A 203 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 207 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 140 -133.55 -98.95 REMARK 500 ALA A 151 40.01 -157.14 REMARK 500 ALA A 235 52.69 -111.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 548 DISTANCE = 5.93 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 303 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 50 O REMARK 620 2 GLU A 50 O 8.8 REMARK 620 3 LEU A 53 O 86.5 95.1 REMARK 620 4 ALA A 56 O 103.3 101.0 91.4 REMARK 620 5 HOH A 503 O 71.6 75.3 79.6 169.8 REMARK 620 6 HOH A 513 O 160.9 154.9 107.4 89.6 97.6 REMARK 620 7 HOH A 513 O 106.4 98.4 162.3 97.2 92.8 57.4 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue QFZ A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NAD A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 303 DBREF 6ZDE A 1 270 UNP Q9BPX1 DHB14_HUMAN 1 270 SEQADV 6ZDE SER A 205 UNP Q9BPX1 THR 205 VARIANT SEQRES 1 A 270 MET ALA THR GLY THR ARG TYR ALA GLY LYS VAL VAL VAL SEQRES 2 A 270 VAL THR GLY GLY GLY ARG GLY ILE GLY ALA GLY ILE VAL SEQRES 3 A 270 ARG ALA PHE VAL ASN SER GLY ALA ARG VAL VAL ILE CYS SEQRES 4 A 270 ASP LYS ASP GLU SER GLY GLY ARG ALA LEU GLU GLN GLU SEQRES 5 A 270 LEU PRO GLY ALA VAL PHE ILE LEU CYS ASP VAL THR GLN SEQRES 6 A 270 GLU ASP ASP VAL LYS THR LEU VAL SER GLU THR ILE ARG SEQRES 7 A 270 ARG PHE GLY ARG LEU ASP CYS VAL VAL ASN ASN ALA GLY SEQRES 8 A 270 HIS HIS PRO PRO PRO GLN ARG PRO GLU GLU THR SER ALA SEQRES 9 A 270 GLN GLY PHE ARG GLN LEU LEU GLU LEU ASN LEU LEU GLY SEQRES 10 A 270 THR TYR THR LEU THR LYS LEU ALA LEU PRO TYR LEU ARG SEQRES 11 A 270 LYS SER GLN GLY ASN VAL ILE ASN ILE SER SER LEU VAL SEQRES 12 A 270 GLY ALA ILE GLY GLN ALA GLN ALA VAL PRO TYR VAL ALA SEQRES 13 A 270 THR LYS GLY ALA VAL THR ALA MET THR LYS ALA LEU ALA SEQRES 14 A 270 LEU ASP GLU SER PRO TYR GLY VAL ARG VAL ASN CYS ILE SEQRES 15 A 270 SER PRO GLY ASN ILE TRP THR PRO LEU TRP GLU GLU LEU SEQRES 16 A 270 ALA ALA LEU MET PRO ASP PRO ARG ALA SER ILE ARG GLU SEQRES 17 A 270 GLY MET LEU ALA GLN PRO LEU GLY ARG MET GLY GLN PRO SEQRES 18 A 270 ALA GLU VAL GLY ALA ALA ALA VAL PHE LEU ALA SER GLU SEQRES 19 A 270 ALA ASN PHE CYS THR GLY ILE GLU LEU LEU VAL THR GLY SEQRES 20 A 270 GLY ALA GLU LEU GLY TYR GLY CYS LYS ALA SER ARG SER SEQRES 21 A 270 THR PRO VAL ASP ALA PRO ASP ILE PRO SER HET QFZ A 301 12 HET NAD A 302 44 HET NA A 303 1 HETNAM QFZ 2,3,4,5,6-PENTAKIS(FLUORANYL)PHENOL HETNAM NAD NICOTINAMIDE-ADENINE-DINUCLEOTIDE HETNAM NA SODIUM ION FORMUL 2 QFZ C6 H F5 O FORMUL 3 NAD C21 H27 N7 O14 P2 FORMUL 4 NA NA 1+ FORMUL 5 HOH *148(H2 O) HELIX 1 AA1 ARG A 19 SER A 32 1 14 HELIX 2 AA2 ASP A 42 LEU A 53 1 12 HELIX 3 AA3 GLN A 65 GLY A 81 1 17 HELIX 4 AA4 ARG A 98 THR A 102 5 5 HELIX 5 AA5 SER A 103 LEU A 115 1 13 HELIX 6 AA6 LEU A 115 GLN A 133 1 19 HELIX 7 AA7 SER A 141 GLY A 147 1 7 HELIX 8 AA8 ALA A 151 SER A 173 1 23 HELIX 9 AA9 PRO A 174 GLY A 176 5 3 HELIX 10 AB1 THR A 189 LEU A 198 1 10 HELIX 11 AB2 ASP A 201 ALA A 212 1 12 HELIX 12 AB3 GLN A 220 GLU A 234 1 15 SHEET 1 AA1 7 ALA A 56 LEU A 60 0 SHEET 2 AA1 7 ARG A 35 ASP A 40 1 N ILE A 38 O VAL A 57 SHEET 3 AA1 7 VAL A 11 THR A 15 1 N VAL A 12 O VAL A 37 SHEET 4 AA1 7 CYS A 85 ASN A 88 1 O VAL A 87 N VAL A 13 SHEET 5 AA1 7 ASN A 135 ILE A 139 1 O ILE A 137 N VAL A 86 SHEET 6 AA1 7 ARG A 178 PRO A 184 1 O ASN A 180 N VAL A 136 SHEET 7 AA1 7 GLU A 242 VAL A 245 1 O LEU A 243 N CYS A 181 SSBOND 1 CYS A 255 CYS A 255 1555 5555 2.03 LINK O AGLU A 50 NA NA A 303 1555 1555 2.39 LINK O BGLU A 50 NA NA A 303 1555 1555 2.32 LINK O LEU A 53 NA NA A 303 1555 1555 2.35 LINK O ALA A 56 NA NA A 303 1555 1555 2.42 LINK NA NA A 303 O HOH A 503 1555 1555 2.68 LINK NA NA A 303 O AHOH A 513 1555 1555 2.29 LINK NA NA A 303 O BHOH A 513 1555 1555 2.35 SITE 1 AC1 11 HIS A 93 SER A 141 VAL A 143 GLN A 148 SITE 2 AC1 11 TYR A 154 ASN A 186 LEU A 191 TRP A 192 SITE 3 AC1 11 TYR A 253 NAD A 302 HOH A 462 SITE 1 AC2 30 GLY A 16 ARG A 19 GLY A 20 ILE A 21 SITE 2 AC2 30 ASP A 40 LYS A 41 CYS A 61 ASP A 62 SITE 3 AC2 30 VAL A 63 ASN A 89 LEU A 113 ILE A 139 SITE 4 AC2 30 SER A 140 SER A 141 TYR A 154 LYS A 158 SITE 5 AC2 30 PRO A 184 GLY A 185 ASN A 186 ILE A 187 SITE 6 AC2 30 THR A 189 PRO A 190 LEU A 191 TRP A 192 SITE 7 AC2 30 QFZ A 301 HOH A 404 HOH A 433 HOH A 443 SITE 8 AC2 30 HOH A 458 HOH A 496 SITE 1 AC3 6 GLU A 50 LEU A 53 PRO A 54 ALA A 56 SITE 2 AC3 6 HOH A 503 HOH A 513 CRYST1 91.251 91.251 133.060 90.00 90.00 90.00 I 4 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010959 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010959 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007515 0.00000