HEADER OXIDOREDUCTASE 16-JUN-20 6ZE3 TITLE FAD-DEPENDENT OXIDOREDUCTASE FROM CHAETOMIUM THERMOPHILUM IN COMPLEX TITLE 2 WITH FRAGMENT (4-METHOXYCARBONYLPHENYL)METHYLAZANIUM COMPND MOL_ID: 1; COMPND 2 MOLECULE: FAD-DEPENDENT OXIDOREDUCTASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 OTHER_DETAILS: THE PROVIDED SEQUENCE CORRESPONDS TO THE MASS COMPND 6 SPECTROMETRY ANALYSIS OF SAMPLE USED FOR CRYSTALLIZATION. SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CHAETOMIUM THERMOPHILUM VAR. THERMOPHILUM DSM SOURCE 3 1495; SOURCE 4 ORGANISM_TAXID: 759272; SOURCE 5 GENE: CTHT_0048040; SOURCE 6 EXPRESSION_SYSTEM: ASPERGILLUS ORYZAE; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 5062 KEYWDS CHAETOMIUM THERMOPHILUM, GLUCOSE-METHANOL-CHOLINE OXIDOREDUCTASE, KEYWDS 2 FRAGMENT SCREENING, (4-METHOXYCARBONYLPHENYL)METHYLAZANIUM, KEYWDS 3 OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR L.SVECOVA,T.SKALOVA,P.KOLENKO,T.KOVAL,L.H.OESTERGAARD,J.DOHNALEK REVDAT 3 24-JAN-24 6ZE3 1 REMARK REVDAT 2 16-JUN-21 6ZE3 1 JRNL REVDAT 1 26-MAY-21 6ZE3 0 JRNL AUTH L.SVECOVA,L.H.OSTERGAARD,T.SKALOVA,K.M.SCHNORR,T.KOVAL', JRNL AUTH 2 P.KOLENKO,J.STRANSKY,D.SEDLAK,J.DUSKOVA,M.TRUNDOVA,J.HASEK, JRNL AUTH 3 J.DOHNALEK JRNL TITL CRYSTALLOGRAPHIC FRAGMENT SCREENING-BASED STUDY OF A NOVEL JRNL TITL 2 FAD-DEPENDENT OXIDOREDUCTASE FROM CHAETOMIUM THERMOPHILUM. JRNL REF ACTA CRYSTALLOGR D STRUCT V. 77 755 2021 JRNL REF 2 BIOL JRNL REFN ISSN 2059-7983 JRNL PMID 34076590 JRNL DOI 10.1107/S2059798321003533 REMARK 2 REMARK 2 RESOLUTION. 2.22 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0258 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.22 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.26 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 30028 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM SELECTION REMARK 3 R VALUE (WORKING + TEST SET) : 0.180 REMARK 3 R VALUE (WORKING SET) : 0.178 REMARK 3 FREE R VALUE : 0.255 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1503 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.22 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.28 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2161 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.95 REMARK 3 BIN R VALUE (WORKING SET) : 0.3690 REMARK 3 BIN FREE R VALUE SET COUNT : 0 REMARK 3 BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4461 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 154 REMARK 3 SOLVENT ATOMS : 310 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 33.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 41.30 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.65300 REMARK 3 B22 (A**2) : -1.16200 REMARK 3 B33 (A**2) : 2.81500 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.277 REMARK 3 ESU BASED ON FREE R VALUE (A): NULL REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.145 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.648 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.960 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4756 ; 0.010 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 4284 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6515 ; 1.738 ; 1.675 REMARK 3 BOND ANGLES OTHERS (DEGREES): 9958 ; 1.296 ; 1.591 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 590 ; 8.139 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 227 ;34.535 ;21.718 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 700 ;13.275 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 32 ;17.053 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 644 ; 0.074 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5343 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 989 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1036 ; 0.196 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 39 ; 0.269 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2270 ; 0.163 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 292 ; 0.169 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2346 ; 3.692 ; 4.271 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2347 ; 3.691 ; 4.272 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2931 ; 5.140 ; 6.380 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2932 ; 5.140 ; 6.382 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2410 ; 3.838 ; 4.650 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 2409 ; 3.835 ; 4.650 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 3581 ; 5.594 ; 6.845 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 3582 ; 5.593 ; 6.845 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK BULK SOLVENT REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED FOR REMARK 3 REFINEMENT IN THE RIDING POSITIONS. THE LAST REFINEMENT CYCLE REMARK 3 WAS PERFORMED AGAINST ALL REFLECTIONS. REMARK 4 REMARK 4 6ZE3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 16-JUN-20. REMARK 100 THE DEPOSITION ID IS D_1292108842. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-MAY-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9184 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 30083 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.220 REMARK 200 RESOLUTION RANGE LOW (A) : 43.261 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.700 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 7.300 REMARK 200 R MERGE (I) : 0.16700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.22 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.29 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.70 REMARK 200 R MERGE FOR SHELL (I) : 1.14700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP 11.7.02 REMARK 200 STARTING MODEL: 6ZE2 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.34 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 17 % (W/V) PEG MME 5000, 0.1 M SODIUM REMARK 280 ACETATE PH 5.5, 0.16 M MAGNESIUM FORMATE, PROTEIN CONCENTRATION REMARK 280 8 MG/ML, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 54.84150 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 57.79250 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 54.84150 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 57.79250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3440 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20840 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 1.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 NA NA A 708 LIES ON A SPECIAL POSITION. REMARK 375 MG MG A 709 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASN A 42 REMARK 465 VAL A 43 REMARK 465 HIS A 44 REMARK 465 SER A 45 REMARK 465 GLY A 631 REMARK 465 ALA A 632 REMARK 465 PRO A 633 REMARK 465 LYS A 634 REMARK 465 SER A 635 REMARK 465 LEU A 636 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 94 116.72 -35.69 REMARK 500 VAL A 124 147.78 179.78 REMARK 500 SER A 199 -148.53 -163.38 REMARK 500 LYS A 231 40.71 -155.29 REMARK 500 TYR A 256 -76.00 -138.03 REMARK 500 LYS A 275 149.44 -177.30 REMARK 500 ASN A 295 75.26 -55.08 REMARK 500 LYS A 304 -81.26 -115.04 REMARK 500 ALA A 309 35.68 -148.52 REMARK 500 PRO A 336 129.22 -39.33 REMARK 500 ASN A 362 51.53 -156.20 REMARK 500 SER A 398 -6.92 90.47 REMARK 500 SER A 400 -167.32 -109.81 REMARK 500 THR A 469 2.74 95.94 REMARK 500 HIS A 564 30.99 -99.03 REMARK 500 CYS A 567 11.94 82.12 REMARK 500 ALA A 569 69.07 -150.22 REMARK 500 SER A 605 80.13 -66.22 REMARK 500 ARG A 628 71.12 62.67 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 CYS A 566 CYS A 567 146.55 REMARK 500 LEU A 604 SER A 605 149.61 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 708 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLN A 390 OE1 REMARK 620 2 GLN A 390 OE1 0.0 REMARK 620 3 HOH A 977 O 126.4 126.4 REMARK 620 4 HOH A 977 O 84.2 84.2 143.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 709 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 984 O REMARK 620 2 HOH A 984 O 150.1 REMARK 620 3 HOH A1029 O 95.4 79.6 REMARK 620 4 HOH A1029 O 79.6 95.4 160.9 REMARK 620 N 1 2 3 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6ZE2 RELATED DB: PDB REMARK 900 RELATED ID: 6ZE4 RELATED DB: PDB REMARK 900 RELATED ID: 6ZE5 RELATED DB: PDB REMARK 900 RELATED ID: 6ZE6 RELATED DB: PDB REMARK 900 RELATED ID: 6ZE7 RELATED DB: PDB REMARK 900 RELATED ID: 7AA2 RELATED DB: PDB DBREF 6ZE3 A 42 636 PDB 6ZE3 6ZE3 42 636 SEQRES 1 A 595 ASN VAL HIS SER ASN TYR THR PHE ILE ILE ALA GLY GLY SEQRES 2 A 595 GLY ILE SER GLY LEU THR LEU ALA ASP ARG LEU THR GLU SEQRES 3 A 595 ASP PRO ARG VAL THR VAL LEU VAL ILE GLU ALA GLY PRO SEQRES 4 A 595 LEU ASP ARG GLY GLU ASP GLY ILE LEU VAL PRO GLY ALA SEQRES 5 A 595 PHE SER PRO TRP LEU TYR PHE TRP PRO GLY LEU VAL SER SEQRES 6 A 595 THR PRO GLN ALA GLY LEU ASN ASN ARG THR VAL ASP VAL SEQRES 7 A 595 ILE THR ALA GLN VAL VAL GLY GLY GLY SER THR ILE ASN SEQRES 8 A 595 ALA MET VAL TYR LEU ARG GLY ASP LYS ASP ASP TYR ASP SEQRES 9 A 595 SER TRP GLY ALA LEU GLY ASN PRO GLY TRP SER TRP ASN SEQRES 10 A 595 SER MET LEU PRO TYR PHE ILE LYS SER GLU THR PHE THR SEQRES 11 A 595 PRO PRO SER PRO GLU LEU ALA ALA ALA GLY ASN ILE THR SEQRES 12 A 595 TRP ASP GLY SER ILE ARG GLY ARG SER GLY PRO VAL ASN SEQRES 13 A 595 TYR SER TYR PRO ASN TYR PHE PHE PRO GLY SER GLU ASN SEQRES 14 A 595 TRP TRP ASN ALA ALA ASN GLU VAL GLY LEU PRO PRO VAL SEQRES 15 A 595 LYS ASP PRO MET ALA GLY SER LYS GLN GLY VAL PHE TRP SEQRES 16 A 595 ILE PRO SER ALA ILE ASP ALA ARG THR MET THR ARG SER SEQRES 17 A 595 HIS ALA ARG ARG ASN HIS TYR ASP ARG VAL SER SER ARG SEQRES 18 A 595 PRO ASN TYR HIS ILE LEU PRO SER HIS LEU VAL SER LYS SEQRES 19 A 595 ILE LEU PHE ARG GLY LYS GLN ALA ILE GLY VAL SER TYR SEQRES 20 A 595 ILE PRO THR SER GLY GLY ASN THR THR THR ASN VAL TYR SEQRES 21 A 595 ALA SER LYS GLU ILE THR LEU ALA ALA GLY GLY LEU GLY SEQRES 22 A 595 THR PRO LYS ILE LEU GLN LEU SER GLY ILE GLY PRO ARG SEQRES 23 A 595 LYS LEU LEU ASN GLU LEU GLY ILE PRO VAL ILE SER ASP SEQRES 24 A 595 LEU PRO GLY VAL GLY GLN ASN LEU GLN ASP GLN PRO THR SEQRES 25 A 595 LEU THR ILE PRO TYR THR PHE THR ASN ASN VAL PHE PRO SEQRES 26 A 595 ASN THR ASP SER LEU THR THR ASN ALA THR TYR ASN ALA SEQRES 27 A 595 GLU GLN ARG ALA LEU TYR ASP SER SER LYS GLN GLY ALA SEQRES 28 A 595 TYR THR ILE VAL ASN SER LEU SER THR ASN ILE GLY VAL SEQRES 29 A 595 MET SER LEU GLN ARG ALA ALA PRO LYS SER TYR ARG GLN SEQRES 30 A 595 ILE ILE ALA ALA ALA ARG ALA ARG SER ALA SER LEU SER SEQRES 31 A 595 LEU PRO PRO GLY THR ASP PRO ALA VAL ILE ARG GLY TYR SEQRES 32 A 595 GLN ALA GLN ARG ASN ALA ILE LEU LYS GLN PHE GLU ASN SEQRES 33 A 595 PRO ASN VAL GLY VAL GLY THR VAL HIS TRP GLY THR GLY SEQRES 34 A 595 SER SER ALA LEU VAL TYR HIS LEU LYS PRO LEU SER ARG SEQRES 35 A 595 GLY THR VAL ASN ILE ARG SER THR ASN PRO LEU ASP ALA SEQRES 36 A 595 PRO GLU ILE ASP TYR ARG THR GLY THR ASP PRO ILE ASP SEQRES 37 A 595 ALA GLN VAL TYR THR SER LEU PHE ARG LYS ASN ARG GLU SEQRES 38 A 595 ILE PHE ASN ALA PRO SER MET ARG VAL LEU GLY PRO SER SEQRES 39 A 595 GLU ALA ALA PRO PHE GLY ALA ASN LEU THR THR ASP GLU SEQRES 40 A 595 GLU ILE TYR ALA VAL MET ARG GLU LEU ILE ASN PRO SER SEQRES 41 A 595 ASN ALA HIS GLN CYS CYS THR ALA ALA MET MET PRO LYS SEQRES 42 A 595 ASP MET GLY GLY VAL VAL SER SER GLU GLN LYS VAL TYR SEQRES 43 A 595 GLY VAL GLN GLY LEU ARG VAL ALA ASP ILE SER PHE TRP SEQRES 44 A 595 PRO PHE GLN LEU SER GLY SER PRO MET ALA THR ALA TYR SEQRES 45 A 595 ALA GLY ALA GLU ARG LEU ALA ASP VAL ILE LYS LYS GLU SEQRES 46 A 595 HIS ARG LEU ALA GLY ALA PRO LYS SER LEU HET NAG B 1 14 HET NAG B 2 14 HET FDA A 701 53 HET NAG A 702 14 HET NAG A 703 14 HET NAG A 704 14 HET NAG A 705 14 HET 8G2 A 706 12 HET FMT A 707 3 HET NA A 708 1 HET MG A 709 1 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM FDA DIHYDROFLAVINE-ADENINE DINUCLEOTIDE HETNAM 8G2 (4-METHOXYCARBONYLPHENYL)METHYLAZANIUM HETNAM FMT FORMIC ACID HETNAM NA SODIUM ION HETNAM MG MAGNESIUM ION HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 2 NAG 6(C8 H15 N O6) FORMUL 3 FDA C27 H35 N9 O15 P2 FORMUL 8 8G2 C9 H12 N O2 1+ FORMUL 9 FMT C H2 O2 FORMUL 10 NA NA 1+ FORMUL 11 MG MG 2+ FORMUL 12 HOH *310(H2 O) HELIX 1 AA1 GLY A 55 THR A 66 1 12 HELIX 2 AA2 GLU A 85 VAL A 90 1 6 HELIX 3 AA3 PRO A 91 PHE A 94 5 4 HELIX 4 AA4 SER A 95 PHE A 100 5 6 HELIX 5 AA5 GLN A 109 ASN A 113 5 5 HELIX 6 AA6 GLY A 126 ILE A 131 5 6 HELIX 7 AA7 ASP A 140 LEU A 150 1 11 HELIX 8 AA8 SER A 156 SER A 167 1 12 HELIX 9 AA9 SER A 174 ASN A 182 1 9 HELIX 10 AB1 ASP A 186 ARG A 190 5 5 HELIX 11 AB2 PRO A 206 VAL A 218 1 13 HELIX 12 AB3 HIS A 250 HIS A 255 1 6 HELIX 13 AB4 TYR A 256 SER A 260 5 5 HELIX 14 AB5 ALA A 310 SER A 322 1 13 HELIX 15 AB6 PRO A 326 LEU A 333 1 8 HELIX 16 AB7 ASP A 369 ASN A 374 1 6 HELIX 17 AB8 ASN A 374 LYS A 389 1 16 HELIX 18 AB9 GLY A 391 ILE A 395 5 5 HELIX 19 AC1 SER A 407 ALA A 412 1 6 HELIX 20 AC2 SER A 415 ARG A 426 1 12 HELIX 21 AC3 SER A 427 LEU A 432 5 6 HELIX 22 AC4 ASP A 437 ASN A 457 1 21 HELIX 23 AC5 PRO A 507 ALA A 526 1 20 HELIX 24 AC6 ALA A 526 VAL A 531 1 6 HELIX 25 AC7 THR A 546 ILE A 558 1 13 HELIX 26 AC8 PRO A 573 GLY A 577 5 5 HELIX 27 AC9 ASP A 596 TRP A 600 5 5 HELIX 28 AD1 PRO A 608 ARG A 628 1 21 SHEET 1 AA1 6 TYR A 265 PRO A 269 0 SHEET 2 AA1 6 VAL A 73 GLU A 77 1 N VAL A 73 O HIS A 266 SHEET 3 AA1 6 TYR A 47 ALA A 52 1 N ILE A 51 O LEU A 74 SHEET 4 AA1 6 THR A 298 LEU A 308 1 O THR A 307 N ALA A 52 SHEET 5 AA1 6 GLN A 282 PRO A 290 -1 N ILE A 284 O ALA A 302 SHEET 6 AA1 6 HIS A 271 ARG A 279 -1 N LEU A 277 O GLY A 285 SHEET 1 AA2 5 TYR A 265 PRO A 269 0 SHEET 2 AA2 5 VAL A 73 GLU A 77 1 N VAL A 73 O HIS A 266 SHEET 3 AA2 5 TYR A 47 ALA A 52 1 N ILE A 51 O LEU A 74 SHEET 4 AA2 5 THR A 298 LEU A 308 1 O THR A 307 N ALA A 52 SHEET 5 AA2 5 LEU A 592 VAL A 594 1 O ARG A 593 N LEU A 308 SHEET 1 AA3 2 GLU A 168 PHE A 170 0 SHEET 2 AA3 2 VAL A 196 TYR A 198 1 O VAL A 196 N THR A 169 SHEET 1 AA4 6 GLY A 233 TRP A 236 0 SHEET 2 AA4 6 ASN A 402 MET A 406 -1 O VAL A 405 N GLY A 233 SHEET 3 AA4 6 GLY A 463 TRP A 467 -1 O VAL A 465 N GLY A 404 SHEET 4 AA4 6 SER A 472 HIS A 477 -1 O LEU A 474 N HIS A 466 SHEET 5 AA4 6 THR A 353 PHE A 360 -1 N ILE A 356 O ALA A 473 SHEET 6 AA4 6 PRO A 534 GLU A 536 -1 O SER A 535 N THR A 359 SHEET 1 AA5 2 ILE A 241 ASP A 242 0 SHEET 2 AA5 2 THR A 247 ARG A 248 -1 O THR A 247 N ASP A 242 SHEET 1 AA6 2 ILE A 324 GLY A 325 0 SHEET 2 AA6 2 SER A 339 ASP A 340 1 O SER A 339 N GLY A 325 SHEET 1 AA7 2 THR A 485 ILE A 488 0 SHEET 2 AA7 2 PRO A 497 ASP A 500 -1 O GLU A 498 N ASN A 487 SSBOND 1 CYS A 566 CYS A 567 1555 1555 2.08 LINK ND2 ASN A 114 C1 NAG A 702 1555 1555 1.44 LINK ND2 ASN A 182 C1 NAG A 703 1555 1555 1.43 LINK ND2 ASN A 197 C1 NAG B 1 1555 1555 1.46 LINK ND2 ASN A 295 C1 NAG A 704 1555 1555 1.44 LINK ND2 ASN A 374 C1 NAG A 705 1555 1555 1.46 LINK O4 NAG B 1 C1 NAG B 2 1555 1555 1.46 LINK OE1 GLN A 390 NA NA A 708 1555 1555 2.76 LINK OE1 GLN A 390 NA NA A 708 1555 2555 2.76 LINK NA NA A 708 O HOH A 977 1555 1555 2.76 LINK NA NA A 708 O HOH A 977 1555 2555 2.76 LINK MG MG A 709 O HOH A 984 1555 1555 2.34 LINK MG MG A 709 O HOH A 984 1555 2555 2.34 LINK MG MG A 709 O HOH A1029 1555 1555 2.42 LINK MG MG A 709 O HOH A1029 1555 2555 2.42 CISPEP 1 PHE A 365 PRO A 366 0 -0.85 CISPEP 2 ALA A 538 PRO A 539 0 -1.88 CRYST1 109.683 115.585 46.605 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009117 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008652 0.000000 0.00000 SCALE3 0.000000 0.000000 0.021457 0.00000