data_6ZGN # _entry.id 6ZGN # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.392 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6ZGN pdb_00006zgn 10.2210/pdb6zgn/pdb WWPDB D_1292109460 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2021-04-28 2 'Structure model' 1 1 2024-05-15 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' atom_type 2 2 'Structure model' chem_comp_atom 3 2 'Structure model' chem_comp_bond 4 2 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_atom_type.pdbx_N_electrons' 2 2 'Structure model' '_atom_type.pdbx_scat_Z' 3 2 'Structure model' '_database_2.pdbx_DOI' 4 2 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6ZGN _pdbx_database_status.recvd_initial_deposition_date 2020-06-19 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Cappele, J.' 1 ? 'Mohamad-Ali, A.' 2 ? 'Leblond-Bourget, N.' 3 ? 'Payot-Lacroix, S.' 4 ? 'Mathiot, S.' 5 ? 'Didierjean, C.' 6 ? 'Favier, F.' 7 ? 'Douzi, B.' 8 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country CH _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Front Mol Biosci' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2296-889X _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 8 _citation.language ? _citation.page_first 642606 _citation.page_last 642606 _citation.title ;Structural and Biochemical Analysis of OrfG: The VirB8-like Component of the Conjugative Type IV Secretion System of ICE St3 From Streptococcus thermophilus . ; _citation.year 2021 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.3389/fmolb.2021.642606 _citation.pdbx_database_id_PubMed 33816557 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Cappele, J.' 1 ? primary 'Mohamad Ali, A.' 2 ? primary 'Leblond-Bourget, N.' 3 ? primary 'Mathiot, S.' 4 ? primary 'Dhalleine, T.' 5 ? primary 'Payot, S.' 6 ? primary 'Savko, M.' 7 ? primary 'Didierjean, C.' 8 ? primary 'Favier, F.' 9 ? primary 'Douzi, B.' 10 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Putative transfer protein' 16337.188 1 ? ? ? ? 2 water nat water 18.015 81 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;SNKVGTLQAQVEATQKQKAQPIDANRKYDYKLQYYLNDYVYAYFTLPQEGDKQQAQVEHLNSFYNFVPDVKAQGQVRNPS TLLDSQLVTVEGKVATYKVKYKEMIQHDKDTEEKELVTGFNIPFDEKEGKYYVSGLPWFSA ; _entity_poly.pdbx_seq_one_letter_code_can ;SNKVGTLQAQVEATQKQKAQPIDANRKYDYKLQYYLNDYVYAYFTLPQEGDKQQAQVEHLNSFYNFVPDVKAQGQVRNPS TLLDSQLVTVEGKVATYKVKYKEMIQHDKDTEEKELVTGFNIPFDEKEGKYYVSGLPWFSA ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 ASN n 1 3 LYS n 1 4 VAL n 1 5 GLY n 1 6 THR n 1 7 LEU n 1 8 GLN n 1 9 ALA n 1 10 GLN n 1 11 VAL n 1 12 GLU n 1 13 ALA n 1 14 THR n 1 15 GLN n 1 16 LYS n 1 17 GLN n 1 18 LYS n 1 19 ALA n 1 20 GLN n 1 21 PRO n 1 22 ILE n 1 23 ASP n 1 24 ALA n 1 25 ASN n 1 26 ARG n 1 27 LYS n 1 28 TYR n 1 29 ASP n 1 30 TYR n 1 31 LYS n 1 32 LEU n 1 33 GLN n 1 34 TYR n 1 35 TYR n 1 36 LEU n 1 37 ASN n 1 38 ASP n 1 39 TYR n 1 40 VAL n 1 41 TYR n 1 42 ALA n 1 43 TYR n 1 44 PHE n 1 45 THR n 1 46 LEU n 1 47 PRO n 1 48 GLN n 1 49 GLU n 1 50 GLY n 1 51 ASP n 1 52 LYS n 1 53 GLN n 1 54 GLN n 1 55 ALA n 1 56 GLN n 1 57 VAL n 1 58 GLU n 1 59 HIS n 1 60 LEU n 1 61 ASN n 1 62 SER n 1 63 PHE n 1 64 TYR n 1 65 ASN n 1 66 PHE n 1 67 VAL n 1 68 PRO n 1 69 ASP n 1 70 VAL n 1 71 LYS n 1 72 ALA n 1 73 GLN n 1 74 GLY n 1 75 GLN n 1 76 VAL n 1 77 ARG n 1 78 ASN n 1 79 PRO n 1 80 SER n 1 81 THR n 1 82 LEU n 1 83 LEU n 1 84 ASP n 1 85 SER n 1 86 GLN n 1 87 LEU n 1 88 VAL n 1 89 THR n 1 90 VAL n 1 91 GLU n 1 92 GLY n 1 93 LYS n 1 94 VAL n 1 95 ALA n 1 96 THR n 1 97 TYR n 1 98 LYS n 1 99 VAL n 1 100 LYS n 1 101 TYR n 1 102 LYS n 1 103 GLU n 1 104 MET n 1 105 ILE n 1 106 GLN n 1 107 HIS n 1 108 ASP n 1 109 LYS n 1 110 ASP n 1 111 THR n 1 112 GLU n 1 113 GLU n 1 114 LYS n 1 115 GLU n 1 116 LEU n 1 117 VAL n 1 118 THR n 1 119 GLY n 1 120 PHE n 1 121 ASN n 1 122 ILE n 1 123 PRO n 1 124 PHE n 1 125 ASP n 1 126 GLU n 1 127 LYS n 1 128 GLU n 1 129 GLY n 1 130 LYS n 1 131 TYR n 1 132 TYR n 1 133 VAL n 1 134 SER n 1 135 GLY n 1 136 LEU n 1 137 PRO n 1 138 TRP n 1 139 PHE n 1 140 SER n 1 141 ALA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 141 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Streptococcus thermophilus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1308 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PlysS _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 64 ? ? ? A . n A 1 2 ASN 2 65 ? ? ? A . n A 1 3 LYS 3 66 ? ? ? A . n A 1 4 VAL 4 67 ? ? ? A . n A 1 5 GLY 5 68 ? ? ? A . n A 1 6 THR 6 69 ? ? ? A . n A 1 7 LEU 7 70 ? ? ? A . n A 1 8 GLN 8 71 ? ? ? A . n A 1 9 ALA 9 72 ? ? ? A . n A 1 10 GLN 10 73 ? ? ? A . n A 1 11 VAL 11 74 ? ? ? A . n A 1 12 GLU 12 75 ? ? ? A . n A 1 13 ALA 13 76 ? ? ? A . n A 1 14 THR 14 77 ? ? ? A . n A 1 15 GLN 15 78 ? ? ? A . n A 1 16 LYS 16 79 ? ? ? A . n A 1 17 GLN 17 80 ? ? ? A . n A 1 18 LYS 18 81 ? ? ? A . n A 1 19 ALA 19 82 ? ? ? A . n A 1 20 GLN 20 83 ? ? ? A . n A 1 21 PRO 21 84 ? ? ? A . n A 1 22 ILE 22 85 ? ? ? A . n A 1 23 ASP 23 86 ? ? ? A . n A 1 24 ALA 24 87 ? ? ? A . n A 1 25 ASN 25 88 ? ? ? A . n A 1 26 ARG 26 89 ? ? ? A . n A 1 27 LYS 27 90 ? ? ? A . n A 1 28 TYR 28 91 ? ? ? A . n A 1 29 ASP 29 92 92 ASP ASP A . n A 1 30 TYR 30 93 93 TYR TYR A . n A 1 31 LYS 31 94 94 LYS LYS A . n A 1 32 LEU 32 95 95 LEU LEU A . n A 1 33 GLN 33 96 96 GLN GLN A . n A 1 34 TYR 34 97 97 TYR TYR A . n A 1 35 TYR 35 98 98 TYR TYR A . n A 1 36 LEU 36 99 99 LEU LEU A . n A 1 37 ASN 37 100 100 ASN ASN A . n A 1 38 ASP 38 101 101 ASP ASP A . n A 1 39 TYR 39 102 102 TYR TYR A . n A 1 40 VAL 40 103 103 VAL VAL A . n A 1 41 TYR 41 104 104 TYR TYR A . n A 1 42 ALA 42 105 105 ALA ALA A . n A 1 43 TYR 43 106 106 TYR TYR A . n A 1 44 PHE 44 107 107 PHE PHE A . n A 1 45 THR 45 108 108 THR THR A . n A 1 46 LEU 46 109 109 LEU LEU A . n A 1 47 PRO 47 110 110 PRO PRO A . n A 1 48 GLN 48 111 111 GLN GLN A . n A 1 49 GLU 49 112 112 GLU GLU A . n A 1 50 GLY 50 113 113 GLY GLY A . n A 1 51 ASP 51 114 114 ASP ASP A . n A 1 52 LYS 52 115 115 LYS LYS A . n A 1 53 GLN 53 116 116 GLN GLN A . n A 1 54 GLN 54 117 117 GLN GLN A . n A 1 55 ALA 55 118 118 ALA ALA A . n A 1 56 GLN 56 119 119 GLN GLN A . n A 1 57 VAL 57 120 120 VAL VAL A . n A 1 58 GLU 58 121 121 GLU GLU A . n A 1 59 HIS 59 122 122 HIS HIS A . n A 1 60 LEU 60 123 123 LEU LEU A . n A 1 61 ASN 61 124 124 ASN ASN A . n A 1 62 SER 62 125 125 SER SER A . n A 1 63 PHE 63 126 126 PHE PHE A . n A 1 64 TYR 64 127 127 TYR TYR A . n A 1 65 ASN 65 128 128 ASN ASN A . n A 1 66 PHE 66 129 129 PHE PHE A . n A 1 67 VAL 67 130 130 VAL VAL A . n A 1 68 PRO 68 131 131 PRO PRO A . n A 1 69 ASP 69 132 132 ASP ASP A . n A 1 70 VAL 70 133 133 VAL VAL A . n A 1 71 LYS 71 134 ? ? ? A . n A 1 72 ALA 72 135 ? ? ? A . n A 1 73 GLN 73 136 ? ? ? A . n A 1 74 GLY 74 137 ? ? ? A . n A 1 75 GLN 75 138 ? ? ? A . n A 1 76 VAL 76 139 139 VAL VAL A . n A 1 77 ARG 77 140 140 ARG ARG A . n A 1 78 ASN 78 141 141 ASN ASN A . n A 1 79 PRO 79 142 142 PRO PRO A . n A 1 80 SER 80 143 143 SER SER A . n A 1 81 THR 81 144 144 THR THR A . n A 1 82 LEU 82 145 145 LEU LEU A . n A 1 83 LEU 83 146 146 LEU LEU A . n A 1 84 ASP 84 147 147 ASP ASP A . n A 1 85 SER 85 148 148 SER SER A . n A 1 86 GLN 86 149 149 GLN GLN A . n A 1 87 LEU 87 150 150 LEU LEU A . n A 1 88 VAL 88 151 151 VAL VAL A . n A 1 89 THR 89 152 152 THR THR A . n A 1 90 VAL 90 153 153 VAL VAL A . n A 1 91 GLU 91 154 154 GLU GLU A . n A 1 92 GLY 92 155 155 GLY GLY A . n A 1 93 LYS 93 156 156 LYS LYS A . n A 1 94 VAL 94 157 157 VAL VAL A . n A 1 95 ALA 95 158 158 ALA ALA A . n A 1 96 THR 96 159 159 THR THR A . n A 1 97 TYR 97 160 160 TYR TYR A . n A 1 98 LYS 98 161 161 LYS LYS A . n A 1 99 VAL 99 162 162 VAL VAL A . n A 1 100 LYS 100 163 163 LYS LYS A . n A 1 101 TYR 101 164 164 TYR TYR A . n A 1 102 LYS 102 165 165 LYS LYS A . n A 1 103 GLU 103 166 166 GLU GLU A . n A 1 104 MET 104 167 167 MET MET A . n A 1 105 ILE 105 168 168 ILE ILE A . n A 1 106 GLN 106 169 ? ? ? A . n A 1 107 HIS 107 170 ? ? ? A . n A 1 108 ASP 108 171 ? ? ? A . n A 1 109 LYS 109 172 ? ? ? A . n A 1 110 ASP 110 173 ? ? ? A . n A 1 111 THR 111 174 ? ? ? A . n A 1 112 GLU 112 175 ? ? ? A . n A 1 113 GLU 113 176 176 GLU GLU A . n A 1 114 LYS 114 177 177 LYS LYS A . n A 1 115 GLU 115 178 178 GLU GLU A . n A 1 116 LEU 116 179 179 LEU LEU A . n A 1 117 VAL 117 180 180 VAL VAL A . n A 1 118 THR 118 181 181 THR THR A . n A 1 119 GLY 119 182 182 GLY GLY A . n A 1 120 PHE 120 183 183 PHE PHE A . n A 1 121 ASN 121 184 184 ASN ASN A . n A 1 122 ILE 122 185 185 ILE ILE A . n A 1 123 PRO 123 186 186 PRO PRO A . n A 1 124 PHE 124 187 187 PHE PHE A . n A 1 125 ASP 125 188 188 ASP ASP A . n A 1 126 GLU 126 189 189 GLU GLU A . n A 1 127 LYS 127 190 190 LYS LYS A . n A 1 128 GLU 128 191 191 GLU GLU A . n A 1 129 GLY 129 192 192 GLY GLY A . n A 1 130 LYS 130 193 193 LYS LYS A . n A 1 131 TYR 131 194 194 TYR TYR A . n A 1 132 TYR 132 195 195 TYR TYR A . n A 1 133 VAL 133 196 196 VAL VAL A . n A 1 134 SER 134 197 197 SER SER A . n A 1 135 GLY 135 198 198 GLY GLY A . n A 1 136 LEU 136 199 199 LEU LEU A . n A 1 137 PRO 137 200 200 PRO PRO A . n A 1 138 TRP 138 201 201 TRP TRP A . n A 1 139 PHE 139 202 202 PHE PHE A . n A 1 140 SER 140 203 203 SER SER A . n A 1 141 ALA 141 204 204 ALA ALA A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 301 75 HOH HOH A . B 2 HOH 2 302 45 HOH HOH A . B 2 HOH 3 303 36 HOH HOH A . B 2 HOH 4 304 32 HOH HOH A . B 2 HOH 5 305 8 HOH HOH A . B 2 HOH 6 306 39 HOH HOH A . B 2 HOH 7 307 62 HOH HOH A . B 2 HOH 8 308 2 HOH HOH A . B 2 HOH 9 309 24 HOH HOH A . B 2 HOH 10 310 44 HOH HOH A . B 2 HOH 11 311 59 HOH HOH A . B 2 HOH 12 312 28 HOH HOH A . B 2 HOH 13 313 37 HOH HOH A . B 2 HOH 14 314 71 HOH HOH A . B 2 HOH 15 315 78 HOH HOH A . B 2 HOH 16 316 23 HOH HOH A . B 2 HOH 17 317 7 HOH HOH A . B 2 HOH 18 318 43 HOH HOH A . B 2 HOH 19 319 9 HOH HOH A . B 2 HOH 20 320 54 HOH HOH A . B 2 HOH 21 321 1 HOH HOH A . B 2 HOH 22 322 3 HOH HOH A . B 2 HOH 23 323 15 HOH HOH A . B 2 HOH 24 324 64 HOH HOH A . B 2 HOH 25 325 55 HOH HOH A . B 2 HOH 26 326 18 HOH HOH A . B 2 HOH 27 327 12 HOH HOH A . B 2 HOH 28 328 10 HOH HOH A . B 2 HOH 29 329 41 HOH HOH A . B 2 HOH 30 330 6 HOH HOH A . B 2 HOH 31 331 14 HOH HOH A . B 2 HOH 32 332 60 HOH HOH A . B 2 HOH 33 333 51 HOH HOH A . B 2 HOH 34 334 53 HOH HOH A . B 2 HOH 35 335 27 HOH HOH A . B 2 HOH 36 336 21 HOH HOH A . B 2 HOH 37 337 33 HOH HOH A . B 2 HOH 38 338 70 HOH HOH A . B 2 HOH 39 339 35 HOH HOH A . B 2 HOH 40 340 38 HOH HOH A . B 2 HOH 41 341 25 HOH HOH A . B 2 HOH 42 342 29 HOH HOH A . B 2 HOH 43 343 11 HOH HOH A . B 2 HOH 44 344 17 HOH HOH A . B 2 HOH 45 345 19 HOH HOH A . B 2 HOH 46 346 83 HOH HOH A . B 2 HOH 47 347 61 HOH HOH A . B 2 HOH 48 348 30 HOH HOH A . B 2 HOH 49 349 56 HOH HOH A . B 2 HOH 50 350 5 HOH HOH A . B 2 HOH 51 351 13 HOH HOH A . B 2 HOH 52 352 42 HOH HOH A . B 2 HOH 53 353 34 HOH HOH A . B 2 HOH 54 354 49 HOH HOH A . B 2 HOH 55 355 69 HOH HOH A . B 2 HOH 56 356 4 HOH HOH A . B 2 HOH 57 357 72 HOH HOH A . B 2 HOH 58 358 16 HOH HOH A . B 2 HOH 59 359 68 HOH HOH A . B 2 HOH 60 360 46 HOH HOH A . B 2 HOH 61 361 79 HOH HOH A . B 2 HOH 62 362 74 HOH HOH A . B 2 HOH 63 363 40 HOH HOH A . B 2 HOH 64 364 20 HOH HOH A . B 2 HOH 65 365 57 HOH HOH A . B 2 HOH 66 366 58 HOH HOH A . B 2 HOH 67 367 66 HOH HOH A . B 2 HOH 68 368 67 HOH HOH A . B 2 HOH 69 369 26 HOH HOH A . B 2 HOH 70 370 31 HOH HOH A . B 2 HOH 71 371 73 HOH HOH A . B 2 HOH 72 372 50 HOH HOH A . B 2 HOH 73 373 47 HOH HOH A . B 2 HOH 74 374 22 HOH HOH A . B 2 HOH 75 375 77 HOH HOH A . B 2 HOH 76 376 63 HOH HOH A . B 2 HOH 77 377 85 HOH HOH A . B 2 HOH 78 378 76 HOH HOH A . B 2 HOH 79 379 82 HOH HOH A . B 2 HOH 80 380 81 HOH HOH A . B 2 HOH 81 381 84 HOH HOH A . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.17.1-3660 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? 20190315 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? 0.7.4 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 6ZGN _cell.details ? _cell.formula_units_Z ? _cell.length_a 50.162 _cell.length_a_esd ? _cell.length_b 50.162 _cell.length_b_esd ? _cell.length_c 120.883 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6ZGN _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6ZGN _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 3.20 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 61.62 _exptl_crystal.description Bipyramid _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 8 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;Ammonium sulfate; 2M Tris pH 8.5; 100 mM ; _exptl_crystal_grow.pdbx_pH_range '8 - 8.5' # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS EIGER X 9M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2019-06-16 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.980 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SOLEIL BEAMLINE PROXIMA 2' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.980 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 'PROXIMA 2' _diffrn_source.pdbx_synchrotron_site SOLEIL # _reflns.B_iso_Wilson_estimate 29.93 _reflns.entry_id 6ZGN _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.75 _reflns.d_resolution_low 46.331 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 16372 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 100 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 25.1 _reflns.pdbx_Rmerge_I_obs 0.027 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 67.5 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared 0.97 _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.028 _reflns.pdbx_Rpim_I_all 0.006 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 1 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 1.75 _reflns_shell.d_res_low 1.78 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 869 _reflns_shell.percent_possible_all 100 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.499 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 23.8 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared 1.08 _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all 0.511 _reflns_shell.pdbx_Rpim_I_all 0.105 _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.975 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] 0.701 _refine.aniso_B[1][2] -0.000 _refine.aniso_B[1][3] -0.000 _refine.aniso_B[2][2] 0.701 _refine.aniso_B[2][3] 0.000 _refine.aniso_B[3][3] -1.402 _refine.B_iso_max ? _refine.B_iso_mean 35.347 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.956 _refine.correlation_coeff_Fo_to_Fc_free 0.945 _refine.details 'Hydrogens have been added in their riding positions' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6ZGN _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.750 _refine.ls_d_res_low 46.331 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 16309 _refine.ls_number_reflns_R_free 835 _refine.ls_number_reflns_R_work 15474 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.951 _refine.ls_percent_reflns_R_free 5.120 _refine.ls_R_factor_all 0.200 _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_free 0.2081 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1996 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'MASK BULK SOLVENT' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details Random _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.100 _refine.pdbx_overall_ESU_R_Free 0.091 _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 1.750 _refine_hist.d_res_low 46.331 _refine_hist.number_atoms_solvent 81 _refine_hist.number_atoms_total 923 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 842 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.014 0.013 870 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.021 0.017 824 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.635 1.657 1180 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 1.784 1.596 1875 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 6.107 5.000 100 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 34.206 25.000 46 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 15.399 15.000 146 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 40.476 15.000 1 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.088 0.200 104 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.004 0.020 980 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.005 0.020 204 ? r_gen_planes_other ? ? 'X-RAY DIFFRACTION' ? 0.226 0.200 144 ? r_nbd_refined ? ? 'X-RAY DIFFRACTION' ? 0.189 0.200 712 ? r_symmetry_nbd_other ? ? 'X-RAY DIFFRACTION' ? 0.204 0.200 420 ? r_nbtor_refined ? ? 'X-RAY DIFFRACTION' ? 0.100 0.200 512 ? r_symmetry_nbtor_other ? ? 'X-RAY DIFFRACTION' ? 0.191 0.200 56 ? r_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? 0.176 0.200 1 ? r_symmetry_xyhbond_nbd_other ? ? 'X-RAY DIFFRACTION' ? 0.387 0.200 12 ? r_symmetry_nbd_refined ? ? 'X-RAY DIFFRACTION' ? 0.175 0.200 30 ? r_nbd_other ? ? 'X-RAY DIFFRACTION' ? 0.200 0.200 6 ? r_symmetry_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? 3.555 3.001 403 ? r_mcbond_it ? ? 'X-RAY DIFFRACTION' ? 3.596 2.996 402 ? r_mcbond_other ? ? 'X-RAY DIFFRACTION' ? 4.522 4.446 499 ? r_mcangle_it ? ? 'X-RAY DIFFRACTION' ? 4.545 4.455 500 ? r_mcangle_other ? ? 'X-RAY DIFFRACTION' ? 5.281 3.386 467 ? r_scbond_it ? ? 'X-RAY DIFFRACTION' ? 5.303 3.387 467 ? r_scbond_other ? ? 'X-RAY DIFFRACTION' ? 7.368 4.884 680 ? r_scangle_it ? ? 'X-RAY DIFFRACTION' ? 7.368 4.885 680 ? r_scangle_other ? ? 'X-RAY DIFFRACTION' ? 8.635 34.049 981 ? r_lrange_it ? ? 'X-RAY DIFFRACTION' ? 8.636 33.543 964 ? r_lrange_other ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 1.750 1.795 1175 . 59 1116 100.0000 . 0.300 . 0.427 . 0.294 . . . . . 0.254 . 20 . 0.878 0.846 'X-RAY DIFFRACTION' 1.795 1.845 1147 . 61 1086 100.0000 . 0.242 . 0.262 . 0.241 . . . . . 0.211 . 20 . 0.924 0.937 'X-RAY DIFFRACTION' 1.845 1.898 1111 . 38 1073 100.0000 . 0.218 . 0.169 . 0.220 . . . . . 0.189 . 20 . 0.939 0.947 'X-RAY DIFFRACTION' 1.898 1.956 1071 . 70 1001 100.0000 . 0.198 . 0.232 . 0.195 . . . . . 0.169 . 20 . 0.946 0.942 'X-RAY DIFFRACTION' 1.956 2.020 1061 . 61 1000 100.0000 . 0.190 . 0.236 . 0.187 . . . . . 0.161 . 20 . 0.954 0.950 'X-RAY DIFFRACTION' 2.020 2.091 1045 . 49 996 100.0000 . 0.181 . 0.173 . 0.182 . . . . . 0.163 . 20 . 0.960 0.961 'X-RAY DIFFRACTION' 2.091 2.170 962 . 43 919 100.0000 . 0.174 . 0.195 . 0.173 . . . . . 0.160 . 20 . 0.959 0.956 'X-RAY DIFFRACTION' 2.170 2.258 958 . 55 903 100.0000 . 0.189 . 0.217 . 0.188 . . . . . 0.177 . 20 . 0.954 0.947 'X-RAY DIFFRACTION' 2.258 2.358 921 . 44 877 100.0000 . 0.196 . 0.224 . 0.194 . . . . . 0.183 . 20 . 0.952 0.943 'X-RAY DIFFRACTION' 2.358 2.473 870 . 48 822 100.0000 . 0.177 . 0.186 . 0.177 . . . . . 0.169 . 20 . 0.957 0.956 'X-RAY DIFFRACTION' 2.473 2.606 846 . 46 800 100.0000 . 0.198 . 0.237 . 0.196 . . . . . 0.190 . 20 . 0.950 0.946 'X-RAY DIFFRACTION' 2.606 2.764 795 . 37 758 100.0000 . 0.207 . 0.201 . 0.208 . . . . . 0.206 . 20 . 0.954 0.958 'X-RAY DIFFRACTION' 2.764 2.954 772 . 34 738 100.0000 . 0.208 . 0.154 . 0.211 . . . . . 0.211 . 20 . 0.953 0.968 'X-RAY DIFFRACTION' 2.954 3.190 694 . 43 651 100.0000 . 0.200 . 0.250 . 0.197 . . . . . 0.200 . 20 . 0.949 0.936 'X-RAY DIFFRACTION' 3.190 3.493 656 . 19 637 100.0000 . 0.195 . 0.178 . 0.195 . . . . . 0.208 . 20 . 0.956 0.954 'X-RAY DIFFRACTION' 3.493 3.902 608 . 40 568 100.0000 . 0.183 . 0.175 . 0.183 . . . . . 0.200 . 20 . 0.964 0.966 'X-RAY DIFFRACTION' 3.902 4.500 542 . 24 517 99.8155 . 0.161 . 0.184 . 0.161 . . . . . 0.185 . 20 . 0.972 0.947 'X-RAY DIFFRACTION' 4.500 5.499 464 . 26 437 99.7845 . 0.184 . 0.167 . 0.185 . . . . . 0.217 . 20 . 0.970 0.971 'X-RAY DIFFRACTION' 5.499 7.722 377 . 26 351 100.0000 . 0.283 . 0.254 . 0.285 . . . . . 0.323 . 20 . 0.947 0.956 'X-RAY DIFFRACTION' 7.722 46.331 241 . 12 224 97.9253 . 0.280 . 0.288 . 0.280 . . . . . 0.368 . 20 . 0.942 0.944 # _struct.entry_id 6ZGN _struct.title ;Crystal structure of VirB8-like OrfG central domain of Streptococcus thermophilus ICESt3; a putative assembly factor of a gram positive conjugative Type IV secretion system. ; _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6ZGN _struct_keywords.text 'NTF2-like, VIRB8-like, transport protein, type IV secretion system, gram positive' _struct_keywords.pdbx_keywords 'TRANSPORT PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q70CA4_STRTR _struct_ref.pdbx_db_accession Q70CA4 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;SNKVGTLQAQVEATQKQKAQPIDANRKYDYKLQYYLNDYVYAYFTLPQEGDKQQAQVEHLNSFYNFVPDVKAQGQVRNPS TLLDSQLVTVEGKVATYKVKYKEMIQHDKDTEEKELVTGFNIPFDEKEGKYYVSGLPWFSA ; _struct_ref.pdbx_align_begin 64 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 6ZGN _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 141 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q70CA4 _struct_ref_seq.db_align_beg 64 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 204 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 64 _struct_ref_seq.pdbx_auth_seq_align_end 204 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 0 ? 1 MORE 0 ? 1 'SSA (A^2)' 6730 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details '~97% Monomeric form; ~3% Hexameric form' # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASP A 29 ? PHE A 44 ? ASP A 92 PHE A 107 1 ? 16 HELX_P HELX_P2 AA2 GLU A 49 ? SER A 62 ? GLU A 112 SER A 125 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 4 ? AA2 ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 THR A 81 ? GLU A 91 ? THR A 144 GLU A 154 AA1 2 VAL A 94 ? LYS A 102 ? VAL A 157 LYS A 165 AA1 3 LEU A 116 ? LYS A 127 ? LEU A 179 LYS A 190 AA1 4 LYS A 130 ? VAL A 133 ? LYS A 193 VAL A 196 AA2 1 THR A 81 ? GLU A 91 ? THR A 144 GLU A 154 AA2 2 VAL A 94 ? LYS A 102 ? VAL A 157 LYS A 165 AA2 3 LEU A 116 ? LYS A 127 ? LEU A 179 LYS A 190 AA2 4 TRP A 138 ? SER A 140 ? TRP A 201 SER A 203 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N ASP A 84 ? N ASP A 147 O LYS A 100 ? O LYS A 163 AA1 2 3 N TYR A 101 ? N TYR A 164 O LEU A 116 ? O LEU A 179 AA1 3 4 N ASP A 125 ? N ASP A 188 O TYR A 132 ? O TYR A 195 AA2 1 2 N ASP A 84 ? N ASP A 147 O LYS A 100 ? O LYS A 163 AA2 2 3 N TYR A 101 ? N TYR A 164 O LEU A 116 ? O LEU A 179 AA2 3 4 N ASN A 121 ? N ASN A 184 O TRP A 138 ? O TRP A 201 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 302 ? B HOH . 2 1 A HOH 376 ? B HOH . 3 1 A HOH 381 ? B HOH . # _pdbx_distant_solvent_atoms.id 1 _pdbx_distant_solvent_atoms.PDB_model_num 1 _pdbx_distant_solvent_atoms.auth_atom_id O _pdbx_distant_solvent_atoms.label_alt_id ? _pdbx_distant_solvent_atoms.auth_asym_id A _pdbx_distant_solvent_atoms.auth_comp_id HOH _pdbx_distant_solvent_atoms.auth_seq_id 381 _pdbx_distant_solvent_atoms.PDB_ins_code ? _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance 7.50 _pdbx_distant_solvent_atoms.neighbor_ligand_distance . # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER 64 ? A SER 1 2 1 Y 1 A ASN 65 ? A ASN 2 3 1 Y 1 A LYS 66 ? A LYS 3 4 1 Y 1 A VAL 67 ? A VAL 4 5 1 Y 1 A GLY 68 ? A GLY 5 6 1 Y 1 A THR 69 ? A THR 6 7 1 Y 1 A LEU 70 ? A LEU 7 8 1 Y 1 A GLN 71 ? A GLN 8 9 1 Y 1 A ALA 72 ? A ALA 9 10 1 Y 1 A GLN 73 ? A GLN 10 11 1 Y 1 A VAL 74 ? A VAL 11 12 1 Y 1 A GLU 75 ? A GLU 12 13 1 Y 1 A ALA 76 ? A ALA 13 14 1 Y 1 A THR 77 ? A THR 14 15 1 Y 1 A GLN 78 ? A GLN 15 16 1 Y 1 A LYS 79 ? A LYS 16 17 1 Y 1 A GLN 80 ? A GLN 17 18 1 Y 1 A LYS 81 ? A LYS 18 19 1 Y 1 A ALA 82 ? A ALA 19 20 1 Y 1 A GLN 83 ? A GLN 20 21 1 Y 1 A PRO 84 ? A PRO 21 22 1 Y 1 A ILE 85 ? A ILE 22 23 1 Y 1 A ASP 86 ? A ASP 23 24 1 Y 1 A ALA 87 ? A ALA 24 25 1 Y 1 A ASN 88 ? A ASN 25 26 1 Y 1 A ARG 89 ? A ARG 26 27 1 Y 1 A LYS 90 ? A LYS 27 28 1 Y 1 A TYR 91 ? A TYR 28 29 1 Y 1 A LYS 134 ? A LYS 71 30 1 Y 1 A ALA 135 ? A ALA 72 31 1 Y 1 A GLN 136 ? A GLN 73 32 1 Y 1 A GLY 137 ? A GLY 74 33 1 Y 1 A GLN 138 ? A GLN 75 34 1 Y 1 A GLN 169 ? A GLN 106 35 1 Y 1 A HIS 170 ? A HIS 107 36 1 Y 1 A ASP 171 ? A ASP 108 37 1 Y 1 A LYS 172 ? A LYS 109 38 1 Y 1 A ASP 173 ? A ASP 110 39 1 Y 1 A THR 174 ? A THR 111 40 1 Y 1 A GLU 175 ? A GLU 112 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GLN N N N N 74 GLN CA C N S 75 GLN C C N N 76 GLN O O N N 77 GLN CB C N N 78 GLN CG C N N 79 GLN CD C N N 80 GLN OE1 O N N 81 GLN NE2 N N N 82 GLN OXT O N N 83 GLN H H N N 84 GLN H2 H N N 85 GLN HA H N N 86 GLN HB2 H N N 87 GLN HB3 H N N 88 GLN HG2 H N N 89 GLN HG3 H N N 90 GLN HE21 H N N 91 GLN HE22 H N N 92 GLN HXT H N N 93 GLU N N N N 94 GLU CA C N S 95 GLU C C N N 96 GLU O O N N 97 GLU CB C N N 98 GLU CG C N N 99 GLU CD C N N 100 GLU OE1 O N N 101 GLU OE2 O N N 102 GLU OXT O N N 103 GLU H H N N 104 GLU H2 H N N 105 GLU HA H N N 106 GLU HB2 H N N 107 GLU HB3 H N N 108 GLU HG2 H N N 109 GLU HG3 H N N 110 GLU HE2 H N N 111 GLU HXT H N N 112 GLY N N N N 113 GLY CA C N N 114 GLY C C N N 115 GLY O O N N 116 GLY OXT O N N 117 GLY H H N N 118 GLY H2 H N N 119 GLY HA2 H N N 120 GLY HA3 H N N 121 GLY HXT H N N 122 HIS N N N N 123 HIS CA C N S 124 HIS C C N N 125 HIS O O N N 126 HIS CB C N N 127 HIS CG C Y N 128 HIS ND1 N Y N 129 HIS CD2 C Y N 130 HIS CE1 C Y N 131 HIS NE2 N Y N 132 HIS OXT O N N 133 HIS H H N N 134 HIS H2 H N N 135 HIS HA H N N 136 HIS HB2 H N N 137 HIS HB3 H N N 138 HIS HD1 H N N 139 HIS HD2 H N N 140 HIS HE1 H N N 141 HIS HE2 H N N 142 HIS HXT H N N 143 HOH O O N N 144 HOH H1 H N N 145 HOH H2 H N N 146 ILE N N N N 147 ILE CA C N S 148 ILE C C N N 149 ILE O O N N 150 ILE CB C N S 151 ILE CG1 C N N 152 ILE CG2 C N N 153 ILE CD1 C N N 154 ILE OXT O N N 155 ILE H H N N 156 ILE H2 H N N 157 ILE HA H N N 158 ILE HB H N N 159 ILE HG12 H N N 160 ILE HG13 H N N 161 ILE HG21 H N N 162 ILE HG22 H N N 163 ILE HG23 H N N 164 ILE HD11 H N N 165 ILE HD12 H N N 166 ILE HD13 H N N 167 ILE HXT H N N 168 LEU N N N N 169 LEU CA C N S 170 LEU C C N N 171 LEU O O N N 172 LEU CB C N N 173 LEU CG C N N 174 LEU CD1 C N N 175 LEU CD2 C N N 176 LEU OXT O N N 177 LEU H H N N 178 LEU H2 H N N 179 LEU HA H N N 180 LEU HB2 H N N 181 LEU HB3 H N N 182 LEU HG H N N 183 LEU HD11 H N N 184 LEU HD12 H N N 185 LEU HD13 H N N 186 LEU HD21 H N N 187 LEU HD22 H N N 188 LEU HD23 H N N 189 LEU HXT H N N 190 LYS N N N N 191 LYS CA C N S 192 LYS C C N N 193 LYS O O N N 194 LYS CB C N N 195 LYS CG C N N 196 LYS CD C N N 197 LYS CE C N N 198 LYS NZ N N N 199 LYS OXT O N N 200 LYS H H N N 201 LYS H2 H N N 202 LYS HA H N N 203 LYS HB2 H N N 204 LYS HB3 H N N 205 LYS HG2 H N N 206 LYS HG3 H N N 207 LYS HD2 H N N 208 LYS HD3 H N N 209 LYS HE2 H N N 210 LYS HE3 H N N 211 LYS HZ1 H N N 212 LYS HZ2 H N N 213 LYS HZ3 H N N 214 LYS HXT H N N 215 MET N N N N 216 MET CA C N S 217 MET C C N N 218 MET O O N N 219 MET CB C N N 220 MET CG C N N 221 MET SD S N N 222 MET CE C N N 223 MET OXT O N N 224 MET H H N N 225 MET H2 H N N 226 MET HA H N N 227 MET HB2 H N N 228 MET HB3 H N N 229 MET HG2 H N N 230 MET HG3 H N N 231 MET HE1 H N N 232 MET HE2 H N N 233 MET HE3 H N N 234 MET HXT H N N 235 PHE N N N N 236 PHE CA C N S 237 PHE C C N N 238 PHE O O N N 239 PHE CB C N N 240 PHE CG C Y N 241 PHE CD1 C Y N 242 PHE CD2 C Y N 243 PHE CE1 C Y N 244 PHE CE2 C Y N 245 PHE CZ C Y N 246 PHE OXT O N N 247 PHE H H N N 248 PHE H2 H N N 249 PHE HA H N N 250 PHE HB2 H N N 251 PHE HB3 H N N 252 PHE HD1 H N N 253 PHE HD2 H N N 254 PHE HE1 H N N 255 PHE HE2 H N N 256 PHE HZ H N N 257 PHE HXT H N N 258 PRO N N N N 259 PRO CA C N S 260 PRO C C N N 261 PRO O O N N 262 PRO CB C N N 263 PRO CG C N N 264 PRO CD C N N 265 PRO OXT O N N 266 PRO H H N N 267 PRO HA H N N 268 PRO HB2 H N N 269 PRO HB3 H N N 270 PRO HG2 H N N 271 PRO HG3 H N N 272 PRO HD2 H N N 273 PRO HD3 H N N 274 PRO HXT H N N 275 SER N N N N 276 SER CA C N S 277 SER C C N N 278 SER O O N N 279 SER CB C N N 280 SER OG O N N 281 SER OXT O N N 282 SER H H N N 283 SER H2 H N N 284 SER HA H N N 285 SER HB2 H N N 286 SER HB3 H N N 287 SER HG H N N 288 SER HXT H N N 289 THR N N N N 290 THR CA C N S 291 THR C C N N 292 THR O O N N 293 THR CB C N R 294 THR OG1 O N N 295 THR CG2 C N N 296 THR OXT O N N 297 THR H H N N 298 THR H2 H N N 299 THR HA H N N 300 THR HB H N N 301 THR HG1 H N N 302 THR HG21 H N N 303 THR HG22 H N N 304 THR HG23 H N N 305 THR HXT H N N 306 TRP N N N N 307 TRP CA C N S 308 TRP C C N N 309 TRP O O N N 310 TRP CB C N N 311 TRP CG C Y N 312 TRP CD1 C Y N 313 TRP CD2 C Y N 314 TRP NE1 N Y N 315 TRP CE2 C Y N 316 TRP CE3 C Y N 317 TRP CZ2 C Y N 318 TRP CZ3 C Y N 319 TRP CH2 C Y N 320 TRP OXT O N N 321 TRP H H N N 322 TRP H2 H N N 323 TRP HA H N N 324 TRP HB2 H N N 325 TRP HB3 H N N 326 TRP HD1 H N N 327 TRP HE1 H N N 328 TRP HE3 H N N 329 TRP HZ2 H N N 330 TRP HZ3 H N N 331 TRP HH2 H N N 332 TRP HXT H N N 333 TYR N N N N 334 TYR CA C N S 335 TYR C C N N 336 TYR O O N N 337 TYR CB C N N 338 TYR CG C Y N 339 TYR CD1 C Y N 340 TYR CD2 C Y N 341 TYR CE1 C Y N 342 TYR CE2 C Y N 343 TYR CZ C Y N 344 TYR OH O N N 345 TYR OXT O N N 346 TYR H H N N 347 TYR H2 H N N 348 TYR HA H N N 349 TYR HB2 H N N 350 TYR HB3 H N N 351 TYR HD1 H N N 352 TYR HD2 H N N 353 TYR HE1 H N N 354 TYR HE2 H N N 355 TYR HH H N N 356 TYR HXT H N N 357 VAL N N N N 358 VAL CA C N S 359 VAL C C N N 360 VAL O O N N 361 VAL CB C N N 362 VAL CG1 C N N 363 VAL CG2 C N N 364 VAL OXT O N N 365 VAL H H N N 366 VAL H2 H N N 367 VAL HA H N N 368 VAL HB H N N 369 VAL HG11 H N N 370 VAL HG12 H N N 371 VAL HG13 H N N 372 VAL HG21 H N N 373 VAL HG22 H N N 374 VAL HG23 H N N 375 VAL HXT H N N 376 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 HIS N CA sing N N 116 HIS N H sing N N 117 HIS N H2 sing N N 118 HIS CA C sing N N 119 HIS CA CB sing N N 120 HIS CA HA sing N N 121 HIS C O doub N N 122 HIS C OXT sing N N 123 HIS CB CG sing N N 124 HIS CB HB2 sing N N 125 HIS CB HB3 sing N N 126 HIS CG ND1 sing Y N 127 HIS CG CD2 doub Y N 128 HIS ND1 CE1 doub Y N 129 HIS ND1 HD1 sing N N 130 HIS CD2 NE2 sing Y N 131 HIS CD2 HD2 sing N N 132 HIS CE1 NE2 sing Y N 133 HIS CE1 HE1 sing N N 134 HIS NE2 HE2 sing N N 135 HIS OXT HXT sing N N 136 HOH O H1 sing N N 137 HOH O H2 sing N N 138 ILE N CA sing N N 139 ILE N H sing N N 140 ILE N H2 sing N N 141 ILE CA C sing N N 142 ILE CA CB sing N N 143 ILE CA HA sing N N 144 ILE C O doub N N 145 ILE C OXT sing N N 146 ILE CB CG1 sing N N 147 ILE CB CG2 sing N N 148 ILE CB HB sing N N 149 ILE CG1 CD1 sing N N 150 ILE CG1 HG12 sing N N 151 ILE CG1 HG13 sing N N 152 ILE CG2 HG21 sing N N 153 ILE CG2 HG22 sing N N 154 ILE CG2 HG23 sing N N 155 ILE CD1 HD11 sing N N 156 ILE CD1 HD12 sing N N 157 ILE CD1 HD13 sing N N 158 ILE OXT HXT sing N N 159 LEU N CA sing N N 160 LEU N H sing N N 161 LEU N H2 sing N N 162 LEU CA C sing N N 163 LEU CA CB sing N N 164 LEU CA HA sing N N 165 LEU C O doub N N 166 LEU C OXT sing N N 167 LEU CB CG sing N N 168 LEU CB HB2 sing N N 169 LEU CB HB3 sing N N 170 LEU CG CD1 sing N N 171 LEU CG CD2 sing N N 172 LEU CG HG sing N N 173 LEU CD1 HD11 sing N N 174 LEU CD1 HD12 sing N N 175 LEU CD1 HD13 sing N N 176 LEU CD2 HD21 sing N N 177 LEU CD2 HD22 sing N N 178 LEU CD2 HD23 sing N N 179 LEU OXT HXT sing N N 180 LYS N CA sing N N 181 LYS N H sing N N 182 LYS N H2 sing N N 183 LYS CA C sing N N 184 LYS CA CB sing N N 185 LYS CA HA sing N N 186 LYS C O doub N N 187 LYS C OXT sing N N 188 LYS CB CG sing N N 189 LYS CB HB2 sing N N 190 LYS CB HB3 sing N N 191 LYS CG CD sing N N 192 LYS CG HG2 sing N N 193 LYS CG HG3 sing N N 194 LYS CD CE sing N N 195 LYS CD HD2 sing N N 196 LYS CD HD3 sing N N 197 LYS CE NZ sing N N 198 LYS CE HE2 sing N N 199 LYS CE HE3 sing N N 200 LYS NZ HZ1 sing N N 201 LYS NZ HZ2 sing N N 202 LYS NZ HZ3 sing N N 203 LYS OXT HXT sing N N 204 MET N CA sing N N 205 MET N H sing N N 206 MET N H2 sing N N 207 MET CA C sing N N 208 MET CA CB sing N N 209 MET CA HA sing N N 210 MET C O doub N N 211 MET C OXT sing N N 212 MET CB CG sing N N 213 MET CB HB2 sing N N 214 MET CB HB3 sing N N 215 MET CG SD sing N N 216 MET CG HG2 sing N N 217 MET CG HG3 sing N N 218 MET SD CE sing N N 219 MET CE HE1 sing N N 220 MET CE HE2 sing N N 221 MET CE HE3 sing N N 222 MET OXT HXT sing N N 223 PHE N CA sing N N 224 PHE N H sing N N 225 PHE N H2 sing N N 226 PHE CA C sing N N 227 PHE CA CB sing N N 228 PHE CA HA sing N N 229 PHE C O doub N N 230 PHE C OXT sing N N 231 PHE CB CG sing N N 232 PHE CB HB2 sing N N 233 PHE CB HB3 sing N N 234 PHE CG CD1 doub Y N 235 PHE CG CD2 sing Y N 236 PHE CD1 CE1 sing Y N 237 PHE CD1 HD1 sing N N 238 PHE CD2 CE2 doub Y N 239 PHE CD2 HD2 sing N N 240 PHE CE1 CZ doub Y N 241 PHE CE1 HE1 sing N N 242 PHE CE2 CZ sing Y N 243 PHE CE2 HE2 sing N N 244 PHE CZ HZ sing N N 245 PHE OXT HXT sing N N 246 PRO N CA sing N N 247 PRO N CD sing N N 248 PRO N H sing N N 249 PRO CA C sing N N 250 PRO CA CB sing N N 251 PRO CA HA sing N N 252 PRO C O doub N N 253 PRO C OXT sing N N 254 PRO CB CG sing N N 255 PRO CB HB2 sing N N 256 PRO CB HB3 sing N N 257 PRO CG CD sing N N 258 PRO CG HG2 sing N N 259 PRO CG HG3 sing N N 260 PRO CD HD2 sing N N 261 PRO CD HD3 sing N N 262 PRO OXT HXT sing N N 263 SER N CA sing N N 264 SER N H sing N N 265 SER N H2 sing N N 266 SER CA C sing N N 267 SER CA CB sing N N 268 SER CA HA sing N N 269 SER C O doub N N 270 SER C OXT sing N N 271 SER CB OG sing N N 272 SER CB HB2 sing N N 273 SER CB HB3 sing N N 274 SER OG HG sing N N 275 SER OXT HXT sing N N 276 THR N CA sing N N 277 THR N H sing N N 278 THR N H2 sing N N 279 THR CA C sing N N 280 THR CA CB sing N N 281 THR CA HA sing N N 282 THR C O doub N N 283 THR C OXT sing N N 284 THR CB OG1 sing N N 285 THR CB CG2 sing N N 286 THR CB HB sing N N 287 THR OG1 HG1 sing N N 288 THR CG2 HG21 sing N N 289 THR CG2 HG22 sing N N 290 THR CG2 HG23 sing N N 291 THR OXT HXT sing N N 292 TRP N CA sing N N 293 TRP N H sing N N 294 TRP N H2 sing N N 295 TRP CA C sing N N 296 TRP CA CB sing N N 297 TRP CA HA sing N N 298 TRP C O doub N N 299 TRP C OXT sing N N 300 TRP CB CG sing N N 301 TRP CB HB2 sing N N 302 TRP CB HB3 sing N N 303 TRP CG CD1 doub Y N 304 TRP CG CD2 sing Y N 305 TRP CD1 NE1 sing Y N 306 TRP CD1 HD1 sing N N 307 TRP CD2 CE2 doub Y N 308 TRP CD2 CE3 sing Y N 309 TRP NE1 CE2 sing Y N 310 TRP NE1 HE1 sing N N 311 TRP CE2 CZ2 sing Y N 312 TRP CE3 CZ3 doub Y N 313 TRP CE3 HE3 sing N N 314 TRP CZ2 CH2 doub Y N 315 TRP CZ2 HZ2 sing N N 316 TRP CZ3 CH2 sing Y N 317 TRP CZ3 HZ3 sing N N 318 TRP CH2 HH2 sing N N 319 TRP OXT HXT sing N N 320 TYR N CA sing N N 321 TYR N H sing N N 322 TYR N H2 sing N N 323 TYR CA C sing N N 324 TYR CA CB sing N N 325 TYR CA HA sing N N 326 TYR C O doub N N 327 TYR C OXT sing N N 328 TYR CB CG sing N N 329 TYR CB HB2 sing N N 330 TYR CB HB3 sing N N 331 TYR CG CD1 doub Y N 332 TYR CG CD2 sing Y N 333 TYR CD1 CE1 sing Y N 334 TYR CD1 HD1 sing N N 335 TYR CD2 CE2 doub Y N 336 TYR CD2 HD2 sing N N 337 TYR CE1 CZ doub Y N 338 TYR CE1 HE1 sing N N 339 TYR CE2 CZ sing Y N 340 TYR CE2 HE2 sing N N 341 TYR CZ OH sing N N 342 TYR OH HH sing N N 343 TYR OXT HXT sing N N 344 VAL N CA sing N N 345 VAL N H sing N N 346 VAL N H2 sing N N 347 VAL CA C sing N N 348 VAL CA CB sing N N 349 VAL CA HA sing N N 350 VAL C O doub N N 351 VAL C OXT sing N N 352 VAL CB CG1 sing N N 353 VAL CB CG2 sing N N 354 VAL CB HB sing N N 355 VAL CG1 HG11 sing N N 356 VAL CG1 HG12 sing N N 357 VAL CG1 HG13 sing N N 358 VAL CG2 HG21 sing N N 359 VAL CG2 HG22 sing N N 360 VAL CG2 HG23 sing N N 361 VAL OXT HXT sing N N 362 # _atom_sites.entry_id 6ZGN _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.019935 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.019935 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008272 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.pdbx_scat_Z _atom_type.pdbx_N_electrons _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c C 6 6 2.310 20.844 1.020 10.208 1.589 0.569 0.865 51.651 0.216 H 1 1 0.493 10.511 0.323 26.126 0.140 3.142 0.041 57.800 0.003 N 7 7 12.222 0.006 3.135 9.893 2.014 28.997 1.167 0.583 -11.538 O 8 8 3.049 13.277 2.287 5.701 1.546 0.324 0.867 32.909 0.251 S 16 16 6.905 1.468 5.203 22.215 1.438 0.254 1.586 56.172 1.050 # loop_