HEADER TRANSPORT PROTEIN 23-JUN-20 6ZHG TITLE CA2+-ATPASE FROM LISTERIA MONOCYTOGENES IN COMPLEX WITH ALF COMPND MOL_ID: 1; COMPND 2 MOLECULE: CALCIUM-TRANSPORTING ATPASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: CATION-TRANSPORTING ATPASE; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LISTERIA MONOCYTOGENES; SOURCE 3 ORGANISM_TAXID: 1639; SOURCE 4 GENE: A3R04_02860, A7B93_02035, A7E37_07960, A7T84_03145, SOURCE 5 A8N46_03115, A9303_08250, AA141_02585, AA38_03115, AA57_04345, SOURCE 6 AA58_04340, AAT23_05730, AAT89_01270, AAV13_08720, AC638_15100, SOURCE 7 ACX75_14550, AD67_04590, ADT87_13595, AE163_09080, AE275_03115, SOURCE 8 AF000_06545, AF016_12590, AF040_14630, AF045_14565, AF209_04695, SOURCE 9 AF234_14885, AFS24_04345, AFT50_03135, AFU02_10535, AFU61_04345, SOURCE 10 AFW07_04365, AFW50_00270, AFW67_02600, AFW77_02595, AFW96_04345, SOURCE 11 AFY00_02970, AFY08_04620, AFY14_04625, AK14_13510, AL416_02600, SOURCE 12 ALZ22_03115, AO083_04340, AOA99_03360, AOX92_14460, AOX97_03115, SOURCE 13 APD69_03345, APD94_04680, APE52_04350, APE55_04330, APE78_08730, SOURCE 14 APE79_10640, APS82_08405, APY22_11485, APY32_10565, AR034_01900, SOURCE 15 AR095_04345, ARG48_02025, ARG59_04340, ARG63_02035, ARG65_02035, SOURCE 16 ARG77_04695, ARG88_04330, ARH36_03115, ARH47_03115, ARH65_03115, SOURCE 17 ARK03_06875, ARQ26_09135, ARS01_02200, ARS03_11205, ARS22_01415, SOURCE 18 ARS28_14570, ARS93_04670, ART37_07935, ARX30_08235, ARX42_11895, SOURCE 19 ARX92_07785, ARY16_02855, ARZ28_06760, ARZ35_04215, AX342_04340, SOURCE 20 B1O05_03115, B1O10_11590, B1O28_10515, B4X86_08480, B6N70_00210, SOURCE 21 BG061_14125, BG923_10000, BGC67_07100, BHE45_01350, BHY47_13215, SOURCE 22 D1B71_01000, D3132_13730, D3B94_03440, D8W60_04330, DC65_04595, SOURCE 23 DRA50_03655, E0I17_04300, E0I30_11095, E0U16_02120, E1003_07560, SOURCE 24 E1013_04820, E1027_03585, E1029_14335, E1043_09385, E1052_08335, SOURCE 25 E1312_04595, E1520_02235, E1984_14165, E1P51_04330, E1P72_02110, SOURCE 26 E1S82_14615, E1S83_04140, E1S89_01415, E1S94_10525, E1T01_09845, SOURCE 27 E1T18_01060, E1T34_01085, E1T48_04575, E1T74_10380, E1U30_14270, SOURCE 28 E1U44_07385, E1U67_11485, E1U91_11060, E1V18_11470, E1V41_12830, SOURCE 29 E1V44_01000, E1V46_01695, E1V59_10805, E1V65_07835, E1V69_04540, SOURCE 30 E1W03_01325, E1W46_07930, E1W58_07000, E1W61_04670, E1W84_05640, SOURCE 31 E1X50_00065, E1X55_00065, E1X60_00065, E1X63_00065, E1X65_10050, SOURCE 32 E1X77_00065, E1Y04_07980, E1Y22_07260, E1Y36_10040, E1Y39_06885, SOURCE 33 E1Y54_04665, E1Y60_14085, E1Y76_10360, E1Y85_07210, E1Y87_04560, SOURCE 34 E1Z07_06265, E1Z13_07150, E1Z38_04405, E1Z70_06110, E1Z81_11410, SOURCE 35 E1Z94_06145, E2B22_10915, E2B94_09335, E2G00_14170, E3362_01060, SOURCE 36 E3W12_04070, E3W83_06115, E3Y59_01330, EFC17_14975, EFC32_14240, SOURCE 37 EHH67_01225, EID73_03115, EID74_03115, EL440_01100, ELF21_11070, SOURCE 38 ELL77_14930, EON24_08110, EVB16_07950, EVC89_14095, EX531_05960, SOURCE 39 EYJ23_03110, EYJ25_09250, EZ544_07110, EZ549_04550, EZ567_04430, SOURCE 40 EZ579_10250, EZ585_00065, EZJ50_04320, F2B64_09785, F9O35_02210, SOURCE 41 FDO43_01425, FDP94_12205, FJL09_07065, FJL15_09360, FJL32_05590, SOURCE 42 FJL36_07055, FJU16_09110, FL790_12360, FMU94_04385, FMZ78_07455, SOURCE 43 FORC68_0870, FPD59_04610, FR205_09240, FR217_09360, GCV90_03275, SOURCE 44 GT55_11320, GU61_02025, GU73_02025, GX56_09050, GX92_03115, SOURCE 45 GY66_03115, GY90_03605, HL26_09525, HL28_10595, HN15_02035, SOURCE 46 IA39_04370, ID69_03115, IU04_04610, IX93_03955, JJ01_03115, SOURCE 47 JL21_03115, JU65_09035, LJ99_03115, MY31_04390, NB32_00070, SOURCE 48 NB83_10590, NI81_01900, OJ48_06380, Q842_09175, Q988_10290, SOURCE 49 R014_10950, R016_03115, RI86_13235, SH19_04830, TS11_06645, SOURCE 50 TS76_03180, TS78_02750, TX39_14805, TX56_02090, TX65_02090, SOURCE 51 UA79_03115, UL23_02205, UL40_07420, UL41_04355, WN76_13220, SOURCE 52 X855_03115, XN56_04310, XN57_03335, XN85_12310, XN87_03395, SOURCE 53 Y170_01010, Y243_04300, Y473_03115, Y519_03115, Y529_03115, SOURCE 54 Z603_10025, Z676_02255, Z689_01060; SOURCE 55 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 56 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 57 EXPRESSION_SYSTEM_PLASMID: PET-22B KEYWDS TRANSPORT PROTEIN P-TYPE ATPASE CA2+ PUMP, TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR S.BASSE HANSEN,M.DYLA,C.NEUMANN,E.M.H.QUISTGAARD,J.LAUWRING ANDERSEN, AUTHOR 2 M.KJAERGAARD,P.NISSEN REVDAT 3 24-JAN-24 6ZHG 1 REMARK REVDAT 2 28-JUL-21 6ZHG 1 JRNL REVDAT 1 19-MAY-21 6ZHG 0 JRNL AUTH S.B.HANSEN,M.DYLA,C.NEUMANN,E.M.H.QUISTGAARD,J.L.ANDERSEN, JRNL AUTH 2 M.KJAERGAARD,P.NISSEN JRNL TITL THE CRYSTAL STRUCTURE OF THE CA 2+ -ATPASE 1 FROM LISTERIA JRNL TITL 2 MONOCYTOGENES REVEALS A PUMP PRIMED FOR DEPHOSPHORYLATION. JRNL REF J.MOL.BIOL. V. 433 67015 2021 JRNL REFN ESSN 1089-8638 JRNL PMID 33933469 JRNL DOI 10.1016/J.JMB.2021.167015 REMARK 2 REMARK 2 RESOLUTION. 4.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.16_3549 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 4.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 60.47 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.9 REMARK 3 NUMBER OF REFLECTIONS : 13393 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.309 REMARK 3 R VALUE (WORKING SET) : 0.309 REMARK 3 FREE R VALUE : 0.327 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 671 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 60.4700 - 6.8400 0.94 2594 137 0.2520 0.2558 REMARK 3 2 6.8400 - 5.4300 0.98 2570 136 0.3540 0.4044 REMARK 3 3 5.4300 - 4.7400 0.97 2526 133 0.3380 0.3724 REMARK 3 4 4.7400 - 4.3100 0.97 2485 130 0.3508 0.3723 REMARK 3 5 4.3100 - 4.0000 0.99 2547 135 0.3840 0.3923 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.663 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 38.659 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 159.8 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 6808 REMARK 3 ANGLE : 1.028 9211 REMARK 3 CHIRALITY : 0.063 1101 REMARK 3 PLANARITY : 0.007 1175 REMARK 3 DIHEDRAL : 13.842 4151 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): -35.4314 1.6870 -35.1603 REMARK 3 T TENSOR REMARK 3 T11: 1.6219 T22: 1.5674 REMARK 3 T33: 1.3594 T12: 0.1050 REMARK 3 T13: 0.0437 T23: 0.0570 REMARK 3 L TENSOR REMARK 3 L11: 1.2147 L22: 0.5120 REMARK 3 L33: 1.0544 L12: -0.1624 REMARK 3 L13: -0.5041 L23: -0.0535 REMARK 3 S TENSOR REMARK 3 S11: -0.0036 S12: 0.9173 S13: 0.0224 REMARK 3 S21: -0.3157 S22: -0.1208 S23: -0.0213 REMARK 3 S31: 0.0618 S32: -0.3030 S33: 0.0000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6ZHG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 23-JUN-20. REMARK 100 THE DEPOSITION ID IS D_1292106774. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-JUL-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PETRA III, EMBL C/O DESY REMARK 200 BEAMLINE : P13 (MX1) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9998 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13420 REMARK 200 RESOLUTION RANGE HIGH (A) : 4.000 REMARK 200 RESOLUTION RANGE LOW (A) : 73.200 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.6 REMARK 200 DATA REDUNDANCY : 4.300 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 4.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 4.20 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6ZHH REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 69.78 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.07 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 16% PEG6000, 14% GLYCEROL, 0.11M REMARK 280 MGCL2, 3.75% T-BUTANOL, 5MM BME AND 80-160MM Z3-10, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 90.63600 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 34.60650 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 90.63600 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 34.60650 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 350 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 41800 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -7.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 0 REMARK 465 ALA A 1 REMARK 465 ASP A 881 REMARK 465 TYR A 882 REMARK 465 ASP A 883 REMARK 465 ILE A 884 REMARK 465 PRO A 885 REMARK 465 THR A 886 REMARK 465 THR A 887 REMARK 465 GLU A 888 REMARK 465 ASN A 889 REMARK 465 LEU A 890 REMARK 465 TYR A 891 REMARK 465 PHE A 892 REMARK 465 GLN A 893 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASP A 334 AL ALF A 901 1.72 REMARK 500 OD1 ASP A 334 F3 ALF A 901 1.77 REMARK 500 OD2 ASP A 334 F4 ALF A 901 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 8 -125.12 57.24 REMARK 500 GLU A 16 27.83 48.92 REMARK 500 THR A 23 5.46 81.31 REMARK 500 THR A 24 -13.21 77.22 REMARK 500 SER A 156 6.63 81.71 REMARK 500 ASP A 186 33.39 -93.30 REMARK 500 ALA A 210 -121.35 60.88 REMARK 500 ALA A 227 -128.83 61.43 REMARK 500 ASN A 267 -130.22 48.72 REMARK 500 THR A 338 -68.41 -124.88 REMARK 500 ALA A 377 63.60 -151.73 REMARK 500 ILE A 424 65.40 74.86 REMARK 500 GLU A 473 -4.84 84.33 REMARK 500 ALA A 594 -134.70 58.97 REMARK 500 ASP A 658 7.33 85.01 REMARK 500 THR A 708 -134.10 51.86 REMARK 500 ALA A 709 -54.99 -121.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 902 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 334 OD2 REMARK 620 2 THR A 336 O 65.8 REMARK 620 3 ASP A 623 OD1 83.4 135.5 REMARK 620 4 ASP A 623 OD2 120.2 104.4 63.5 REMARK 620 5 HOH A1001 O 115.1 154.5 67.2 96.8 REMARK 620 6 HOH A1002 O 159.9 97.5 116.6 73.2 74.9 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ALF A 901 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 902 DBREF1 6ZHG A 2 880 UNP A0A1C7PY84_LISMN DBREF2 6ZHG A A0A1C7PY84 2 880 SEQADV 6ZHG MET A 0 UNP A0A1C7PY8 INITIATING METHIONINE SEQADV 6ZHG ALA A 1 UNP A0A1C7PY8 EXPRESSION TAG SEQADV 6ZHG ASP A 881 UNP A0A1C7PY8 EXPRESSION TAG SEQADV 6ZHG TYR A 882 UNP A0A1C7PY8 EXPRESSION TAG SEQADV 6ZHG ASP A 883 UNP A0A1C7PY8 EXPRESSION TAG SEQADV 6ZHG ILE A 884 UNP A0A1C7PY8 EXPRESSION TAG SEQADV 6ZHG PRO A 885 UNP A0A1C7PY8 EXPRESSION TAG SEQADV 6ZHG THR A 886 UNP A0A1C7PY8 EXPRESSION TAG SEQADV 6ZHG THR A 887 UNP A0A1C7PY8 EXPRESSION TAG SEQADV 6ZHG GLU A 888 UNP A0A1C7PY8 EXPRESSION TAG SEQADV 6ZHG ASN A 889 UNP A0A1C7PY8 EXPRESSION TAG SEQADV 6ZHG LEU A 890 UNP A0A1C7PY8 EXPRESSION TAG SEQADV 6ZHG TYR A 891 UNP A0A1C7PY8 EXPRESSION TAG SEQADV 6ZHG PHE A 892 UNP A0A1C7PY8 EXPRESSION TAG SEQADV 6ZHG GLN A 893 UNP A0A1C7PY8 EXPRESSION TAG SEQRES 1 A 894 MET ALA GLU ILE TYR ARG LYS SER ALA ALA GLU THR PHE SEQRES 2 A 894 THR GLN LEU GLU ALA THR GLU LYS GLY LEU THR THR SER SEQRES 3 A 894 GLU VAL THR LYS ARG GLN GLU LYS TYR GLY PHE ASN GLU SEQRES 4 A 894 LEU LYS ASN LYS LYS LYS ASP PRO LEU TRP LYS LEU PHE SEQRES 5 A 894 LEU GLU THR PHE LYS ASP PRO MET VAL ILE VAL LEU VAL SEQRES 6 A 894 ILE ALA ALA LEU VAL GLN LEU VAL LEU GLY GLU VAL VAL SEQRES 7 A 894 GLU SER LEU ILE ILE PHE LEU VAL LEU ILE VAL ASN SER SEQRES 8 A 894 ILE ILE SER VAL VAL GLN THR ARG LYS ALA GLU SER SER SEQRES 9 A 894 LEU ASP ALA LEU ARG GLU MET SER ALA PRO VAL ALA LYS SEQRES 10 A 894 VAL ILE ARG ASP GLY SER LYS GLN SER ILE HIS ALA ARG SEQRES 11 A 894 GLU LEU VAL PRO GLY ASP VAL VAL ILE LEU ASP ALA GLY SEQRES 12 A 894 ASP PHE VAL PRO ALA ASP GLY ARG LEU PHE GLU SER GLY SEQRES 13 A 894 SER LEU LYS ILE ASP GLU GLY MET LEU THR GLY GLU SER SEQRES 14 A 894 GLU ALA VAL GLU LYS TYR ILE ASP THR ILE PRO ASP GLU SEQRES 15 A 894 VAL GLY LEU GLY ASP ARG VAL ASN MET VAL PHE SER GLY SEQRES 16 A 894 SER LEU VAL VAL TYR GLY ARG GLY MET PHE VAL VAL THR SEQRES 17 A 894 GLY THR ALA SER GLU THR GLU ILE GLY LYS ILE ALA GLY SEQRES 18 A 894 LEU LEU GLU THR ALA GLU ALA LYS GLN THR PRO LEU GLN SEQRES 19 A 894 ARG LYS LEU GLU SER PHE SER LYS LYS LEU GLY LEU GLY SEQRES 20 A 894 ILE LEU ALA LEU CYS VAL LEU ILE PHE ALA VAL GLU ALA SEQRES 21 A 894 GLY ARG VAL LEU LEU GLY ASP ASN SER ALA ASP MET ALA SEQRES 22 A 894 THR ALA ILE LEU ASN ALA PHE MET PHE ALA VAL ALA VAL SEQRES 23 A 894 ALA VAL ALA ALA ILE PRO GLU ALA LEU SER SER ILE VAL SEQRES 24 A 894 THR ILE VAL LEU ALA VAL GLY THR ASN LYS MET ALA LYS SEQRES 25 A 894 GLN HIS ALA ILE ILE ARG LYS LEU PRO ALA VAL GLU THR SEQRES 26 A 894 LEU GLY SER THR SER VAL ILE CYS THR ASP LYS THR GLY SEQRES 27 A 894 THR LEU THR GLN ASN LYS MET THR VAL VAL ASP TYR TYR SEQRES 28 A 894 LEU PRO ASP GLY THR LYS GLU ASN PHE PRO GLU SER PRO SEQRES 29 A 894 GLU ASN TRP SER GLU GLY GLU ARG ARG LEU ILE HIS ILE SEQRES 30 A 894 ALA VAL LEU CYS ASN ASP SER ASN ILE ASN SER GLU GLY SEQRES 31 A 894 LYS GLU LEU GLY ASP PRO THR GLU VAL ALA LEU ILE ALA SEQRES 32 A 894 PHE SER ASN LYS ASN ASN GLN ASP TYR ASN GLU ILE ARG SEQRES 33 A 894 GLU LYS PHE ILE ARG GLU GLY GLU ILE PRO PHE ASP SER SEQRES 34 A 894 ASP ARG LYS LEU MET SER THR LEU HIS THR PHE ASN GLU SEQRES 35 A 894 ASN LYS ALA MET LEU THR LYS GLY GLY PRO ASP VAL MET SEQRES 36 A 894 PHE ALA ARG CYS SER TYR VAL PHE LEU ASP GLY GLU GLU SEQRES 37 A 894 LYS PRO MET THR GLU GLU ILE LEU ALA LYS LEU LYS GLU SEQRES 38 A 894 THR ASN GLU GLU PHE SER ASN GLN ALA LEU ARG VAL LEU SEQRES 39 A 894 ALA TYR GLY TYR LYS ARG MET PRO ALA ASP THR THR GLU SEQRES 40 A 894 LEU LYS LEU GLU ASP GLU GLN ASP ILE VAL LEU VAL GLY SEQRES 41 A 894 LEU THR ALA MET ILE ASP PRO PRO ARG GLU ALA VAL TYR SEQRES 42 A 894 ALA SER ILE GLU GLU SER LYS LYS ALA GLY ILE ARG THR SEQRES 43 A 894 VAL MET ILE THR GLY ASP HIS LYS THR THR ALA GLN ALA SEQRES 44 A 894 ILE GLY ARG ASP ILE GLY LEU MET ASP ALA ASP ASP ILE SEQRES 45 A 894 ALA LEU THR GLY GLN GLU LEU ASP ALA MET PRO GLU GLU SEQRES 46 A 894 GLU LEU ASP LYS LYS LEU GLU HIS ILE ALA VAL TYR ALA SEQRES 47 A 894 ARG VAL SER PRO GLU ASN LYS ILE ARG ILE VAL LYS ALA SEQRES 48 A 894 TRP GLN LYS LYS GLY LYS ILE THR ALA MET THR GLY ASP SEQRES 49 A 894 GLY VAL ASN ASP ALA PRO ALA LEU LYS GLN ALA ASP ILE SEQRES 50 A 894 GLY VAL ALA MET GLY SER GLY THR ASP VAL ALA LYS ASP SEQRES 51 A 894 SER ALA ALA MET ILE LEU THR ASP ASP ASN PHE VAL SER SEQRES 52 A 894 ILE VAL ASP ALA VAL GLY VAL GLY ARG THR VAL PHE ASP SEQRES 53 A 894 ASN ILE LYS LYS SER ILE ALA TYR LEU PHE ALA GLY ASN SEQRES 54 A 894 LEU GLY ALA ILE ILE ALA ILE LEU PHE ALA LEU VAL LEU SEQRES 55 A 894 ASP TRP ILE ASN PRO PHE THR ALA LEU GLN LEU LEU PHE SEQRES 56 A 894 ILE ASN LEU VAL ASN ASP SER LEU PRO ALA ILE ALA LEU SEQRES 57 A 894 GLY MET GLU LYS ALA GLU PRO ASP VAL MET LYS ARG LYS SEQRES 58 A 894 PRO ARG ASP ILE ASN GLU GLY ILE PHE ALA GLY GLY THR SEQRES 59 A 894 MET ARG ALA VAL ILE SER ARG GLY VAL LEU ILE GLY ILE SEQRES 60 A 894 ALA VAL ILE ILE SER GLN TYR ILE GLY MET GLN ILE SER SEQRES 61 A 894 PRO GLU MET SER VAL ALA MET ALA PHE THR THR LEU ILE SEQRES 62 A 894 LEU ALA ARG THR LEU GLN THR PHE ALA ALA ARG SER ASN SEQRES 63 A 894 VAL GLN THR ALA PHE GLY ALA GLY PHE PHE SER ASN LYS SEQRES 64 A 894 TYR VAL ILE GLY ALA VAL LEU LEU CYS PHE VAL LEU TYR SEQRES 65 A 894 GLY ILE THR VAL LEU PRO GLY ALA ARG GLU ILE PHE SER SEQRES 66 A 894 ILE PRO ALA SER PHE GLY LEU HIS GLU TRP SER ILE ALA SEQRES 67 A 894 ALA GLY LEU ALA LEU ALA ALA VAL VAL MET MET GLU ILE SEQRES 68 A 894 ILE LYS VAL VAL GLN ASN LYS PHE PHE LYS ASP TYR ASP SEQRES 69 A 894 ILE PRO THR THR GLU ASN LEU TYR PHE GLN HET ALF A 901 5 HET MG A 902 1 HETNAM ALF TETRAFLUOROALUMINATE ION HETNAM MG MAGNESIUM ION FORMUL 2 ALF AL F4 1- FORMUL 3 MG MG 2+ FORMUL 4 HOH *3(H2 O) HELIX 1 AA1 ALA A 8 GLU A 16 1 9 HELIX 2 AA2 THR A 24 TYR A 34 1 11 HELIX 3 AA3 PRO A 46 GLU A 53 1 8 HELIX 4 AA4 THR A 54 LYS A 56 5 3 HELIX 5 AA5 ASP A 57 GLY A 74 1 18 HELIX 6 AA6 GLU A 75 GLU A 101 1 27 HELIX 7 AA7 GLU A 161 GLY A 166 1 6 HELIX 8 AA8 GLY A 183 ARG A 187 5 5 HELIX 9 AA9 THR A 209 GLU A 212 5 4 HELIX 10 AB1 THR A 213 ALA A 225 1 13 HELIX 11 AB2 THR A 230 LEU A 264 1 35 HELIX 12 AB3 ASP A 270 ILE A 290 1 21 HELIX 13 AB4 ALA A 293 MET A 309 1 17 HELIX 14 AB5 ALA A 310 GLN A 312 5 3 HELIX 15 AB6 PRO A 320 THR A 328 1 9 HELIX 16 AB7 GLU A 370 ILE A 376 1 7 HELIX 17 AB8 ASP A 394 ASN A 407 1 14 HELIX 18 AB9 TYR A 411 GLU A 416 1 6 HELIX 19 AC1 GLY A 450 CYS A 458 1 9 HELIX 20 AC2 ILE A 474 GLN A 488 1 15 HELIX 21 AC3 ALA A 530 ALA A 541 1 12 HELIX 22 AC4 HIS A 552 ILE A 559 1 8 HELIX 23 AC5 GLY A 575 MET A 581 1 7 HELIX 24 AC6 PRO A 582 GLU A 591 1 10 HELIX 25 AC7 SER A 600 LYS A 614 1 15 HELIX 26 AC8 ASP A 627 ALA A 634 1 8 HELIX 27 AC9 THR A 644 SER A 650 1 7 HELIX 28 AD1 PHE A 660 LEU A 701 1 42 HELIX 29 AD2 ALA A 709 VAL A 718 1 10 HELIX 30 AD3 ASP A 720 GLY A 728 1 9 HELIX 31 AD4 GLU A 733 ARG A 739 5 7 HELIX 32 AD5 GLY A 752 SER A 779 1 28 HELIX 33 AD6 SER A 779 GLN A 798 1 20 HELIX 34 AD7 GLN A 798 ARG A 803 1 6 HELIX 35 AD8 ASN A 817 LEU A 836 1 20 HELIX 36 AD9 LEU A 836 GLU A 841 1 6 HELIX 37 AE1 ILE A 842 SER A 844 5 3 HELIX 38 AE2 GLY A 850 ILE A 870 1 21 HELIX 39 AE3 ILE A 871 LYS A 880 1 10 SHEET 1 AA1 6 SER A 122 HIS A 127 0 SHEET 2 AA1 6 VAL A 114 ARG A 119 -1 N VAL A 117 O GLN A 124 SHEET 3 AA1 6 VAL A 136 LEU A 139 -1 O ILE A 138 N LYS A 116 SHEET 4 AA1 6 GLY A 202 VAL A 205 -1 O GLY A 202 N LEU A 139 SHEET 5 AA1 6 GLY A 149 GLU A 153 -1 N ARG A 150 O VAL A 205 SHEET 6 AA1 6 MET A 190 VAL A 191 -1 O VAL A 191 N GLY A 149 SHEET 1 AA2 3 VAL A 171 GLU A 172 0 SHEET 2 AA2 3 LYS A 158 ASP A 160 -1 N ILE A 159 O VAL A 171 SHEET 3 AA2 3 LEU A 196 VAL A 197 -1 O LEU A 196 N ASP A 160 SHEET 1 AA3 6 ALA A 314 ILE A 316 0 SHEET 2 AA3 6 MET A 653 LEU A 655 -1 O ILE A 654 N ILE A 315 SHEET 3 AA3 6 GLY A 637 MET A 640 1 N ALA A 639 O LEU A 655 SHEET 4 AA3 6 THR A 618 GLY A 622 1 N MET A 620 O VAL A 638 SHEET 5 AA3 6 VAL A 330 THR A 333 1 N CYS A 332 O THR A 621 SHEET 6 AA3 6 ARG A 544 MET A 547 1 O VAL A 546 N ILE A 331 SHEET 1 AA4 5 TYR A 349 TYR A 350 0 SHEET 2 AA4 5 LEU A 517 MET A 523 -1 O LEU A 520 N TYR A 350 SHEET 3 AA4 5 ARG A 491 GLY A 496 -1 N TYR A 495 O GLY A 519 SHEET 4 AA4 5 LYS A 443 GLY A 449 -1 N GLY A 449 O ALA A 494 SHEET 5 AA4 5 SER A 434 THR A 438 -1 N THR A 435 O LEU A 446 SHEET 1 AA5 2 VAL A 461 PHE A 462 0 SHEET 2 AA5 2 GLU A 466 GLU A 467 -1 O GLU A 467 N VAL A 461 SHEET 1 AA6 2 LEU A 573 THR A 574 0 SHEET 2 AA6 2 TYR A 596 ALA A 597 1 O ALA A 597 N LEU A 573 LINK OD2 ASP A 334 MG MG A 902 1555 1555 2.14 LINK O THR A 336 MG MG A 902 1555 1555 2.10 LINK OD1 ASP A 623 MG MG A 902 1555 1555 1.92 LINK OD2 ASP A 623 MG MG A 902 1555 1555 2.18 LINK MG MG A 902 O HOH A1001 1555 1555 2.20 LINK MG MG A 902 O HOH A1002 1555 1555 2.18 SITE 1 AC1 14 THR A 165 ASP A 334 LYS A 335 THR A 336 SITE 2 AC1 14 THR A 549 GLY A 550 LYS A 604 ASP A 623 SITE 3 AC1 14 ASN A 626 ASP A 627 MG A 902 HOH A1001 SITE 4 AC1 14 HOH A1002 HOH A1003 SITE 1 AC2 7 ASP A 334 THR A 336 GLY A 337 ASP A 623 SITE 2 AC2 7 ALF A 901 HOH A1001 HOH A1002 CRYST1 181.272 69.213 124.258 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005517 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014448 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008048 0.00000