HEADER HYDROLASE 29-JUN-20 6ZK6 TITLE PROTEIN PHOSPHATASE 1 (PP1) T320E MUTANT COMPND MOL_ID: 1; COMPND 2 MOLECULE: SERINE/THREONINE-PROTEIN PHOSPHATASE PP1-ALPHA CATALYTIC COMPND 3 SUBUNIT; COMPND 4 CHAIN: A; COMPND 5 SYNONYM: PP-1A; COMPND 6 EC: 3.1.3.16; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PPP1CA, PPP1A; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PROTEIN PHOSPHATASE 1 REGULATION, PHOSPHORYLATION, PHOSPHOMIMETIC KEYWDS 2 MUTANT, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR F.SALVI,O.BARABAS,M.KOEHN REVDAT 3 31-JAN-24 6ZK6 1 REMARK REVDAT 2 10-MAR-21 6ZK6 1 JRNL REVDAT 1 18-NOV-20 6ZK6 0 JRNL AUTH F.SALVI,B.HOERMANN,J.DEL PINO GARCIA,M.FONTANILLO,R.DERUA, JRNL AUTH 2 M.BEULLENS,M.BOLLEN,O.BARABAS,M.KOHN JRNL TITL TOWARDS DISSECTING THE MECHANISM OF PROTEIN PHOSPHATASE-1 JRNL TITL 2 INHIBITION BY ITS C-TERMINAL PHOSPHORYLATION. JRNL REF CHEMBIOCHEM V. 22 834 2021 JRNL REFN ESSN 1439-7633 JRNL PMID 33085143 JRNL DOI 10.1002/CBIC.202000669 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.22 REMARK 3 DATA CUTOFF (SIGMA(F)) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.4 REMARK 3 NUMBER OF REFLECTIONS : 26637 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : 0.161 REMARK 3 R VALUE (WORKING SET) : 0.159 REMARK 3 FREE R VALUE : 0.194 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.830 REMARK 3 FREE R VALUE TEST SET COUNT : 1286 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.98 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2823 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.34 REMARK 3 BIN R VALUE (WORKING SET) : 0.2636 REMARK 3 BIN FREE R VALUE SET COUNT : 137 REMARK 3 BIN FREE R VALUE : 0.3166 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2297 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 9 REMARK 3 SOLVENT ATOMS : 128 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 34.47 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 43.57 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): NULL REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.181 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : NULL REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): NULL ; NULL ; NULL REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): NULL ; NULL ; NULL REMARK 3 GENERAL PLANES REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : NULL NULL NULL NULL REMARK 3 ORIGIN FOR THE GROUP (A): 87.7266 95.8373 1.5107 REMARK 3 T TENSOR REMARK 3 T11: 0.5819 T22: 0.6024 REMARK 3 T33: 0.4606 T12: 0.1590 REMARK 3 T13: 0.1928 T23: 0.2122 REMARK 3 L TENSOR REMARK 3 L11: 3.6745 L22: 4.4295 REMARK 3 L33: 5.5600 L12: -3.0599 REMARK 3 L13: -1.2909 L23: 1.4520 REMARK 3 S TENSOR REMARK 3 S11: 0.1582 S12: 0.5487 S13: 0.9139 REMARK 3 S21: -0.8221 S22: -0.1490 S23: -0.7218 REMARK 3 S31: -0.5944 S32: 0.6815 S33: -0.0064 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : NULL NULL NULL NULL REMARK 3 ORIGIN FOR THE GROUP (A): 72.4381 87.2825 3.2887 REMARK 3 T TENSOR REMARK 3 T11: 0.5197 T22: 0.6196 REMARK 3 T33: 0.4414 T12: 0.1078 REMARK 3 T13: -0.1673 T23: 0.0227 REMARK 3 L TENSOR REMARK 3 L11: 2.0815 L22: 4.2366 REMARK 3 L33: 2.8878 L12: -0.0370 REMARK 3 L13: -0.6991 L23: -1.7195 REMARK 3 S TENSOR REMARK 3 S11: 0.3816 S12: 1.0985 S13: 0.0153 REMARK 3 S21: -1.1049 S22: -0.0584 S23: 1.0643 REMARK 3 S31: 0.1852 S32: -0.2943 S33: -0.2591 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : NULL NULL NULL NULL REMARK 3 ORIGIN FOR THE GROUP (A): 82.4669 88.1171 12.6336 REMARK 3 T TENSOR REMARK 3 T11: 0.2673 T22: 0.3211 REMARK 3 T33: 0.2488 T12: 0.0399 REMARK 3 T13: 0.0296 T23: 0.0587 REMARK 3 L TENSOR REMARK 3 L11: 2.4597 L22: 2.8916 REMARK 3 L33: 2.4799 L12: -0.7731 REMARK 3 L13: -0.2274 L23: -0.1885 REMARK 3 S TENSOR REMARK 3 S11: 0.2299 S12: 0.4091 S13: 0.1699 REMARK 3 S21: -0.2897 S22: -0.2567 S23: -0.1373 REMARK 3 S31: -0.0891 S32: 0.0997 S33: 0.0405 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : NULL NULL NULL NULL REMARK 3 ORIGIN FOR THE GROUP (A): 74.4784 83.2430 14.8551 REMARK 3 T TENSOR REMARK 3 T11: 0.2916 T22: 0.3344 REMARK 3 T33: 0.3184 T12: 0.0273 REMARK 3 T13: -0.0150 T23: 0.0200 REMARK 3 L TENSOR REMARK 3 L11: 1.9711 L22: 2.2965 REMARK 3 L33: 2.5279 L12: -0.5012 REMARK 3 L13: 0.3447 L23: -1.3741 REMARK 3 S TENSOR REMARK 3 S11: 0.0501 S12: 0.1215 S13: -0.0399 REMARK 3 S21: -0.2337 S22: -0.0222 S23: 0.3571 REMARK 3 S31: 0.0872 S32: -0.2121 S33: -0.0020 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : NULL NULL NULL NULL REMARK 3 ORIGIN FOR THE GROUP (A): 76.1504 78.7015 29.6984 REMARK 3 T TENSOR REMARK 3 T11: 0.3054 T22: 0.2481 REMARK 3 T33: 0.2973 T12: -0.0022 REMARK 3 T13: 0.0502 T23: 0.0370 REMARK 3 L TENSOR REMARK 3 L11: 2.0365 L22: 3.5401 REMARK 3 L33: 2.2034 L12: -0.9680 REMARK 3 L13: -0.5155 L23: -0.8195 REMARK 3 S TENSOR REMARK 3 S11: -0.0406 S12: -0.1813 S13: -0.1921 REMARK 3 S21: 0.4384 S22: -0.0067 S23: 0.3222 REMARK 3 S31: 0.0702 S32: -0.0204 S33: 0.0454 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : NULL NULL NULL NULL REMARK 3 ORIGIN FOR THE GROUP (A): 90.9447 86.3338 27.7068 REMARK 3 T TENSOR REMARK 3 T11: 0.3640 T22: 0.3983 REMARK 3 T33: 0.4396 T12: -0.0367 REMARK 3 T13: -0.0809 T23: 0.0391 REMARK 3 L TENSOR REMARK 3 L11: 2.5835 L22: 0.7921 REMARK 3 L33: 1.8801 L12: 0.9803 REMARK 3 L13: -0.4926 L23: 0.2072 REMARK 3 S TENSOR REMARK 3 S11: 0.0751 S12: -0.5887 S13: 0.1818 REMARK 3 S21: 0.8102 S22: -0.3455 S23: -0.8662 REMARK 3 S31: -0.4823 S32: 0.5542 S33: 0.1693 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : NULL NULL NULL NULL REMARK 3 ORIGIN FOR THE GROUP (A): 95.8112 77.8347 19.5529 REMARK 3 T TENSOR REMARK 3 T11: 0.3062 T22: 0.4233 REMARK 3 T33: 0.4516 T12: 0.0662 REMARK 3 T13: 0.0085 T23: 0.0661 REMARK 3 L TENSOR REMARK 3 L11: 3.3962 L22: 9.3230 REMARK 3 L33: 3.6305 L12: 1.5797 REMARK 3 L13: -0.4698 L23: 0.6505 REMARK 3 S TENSOR REMARK 3 S11: 0.0627 S12: -0.0110 S13: -0.3523 REMARK 3 S21: -0.1880 S22: -0.1624 S23: -1.3459 REMARK 3 S31: 0.2728 S32: 0.4552 S33: 0.0798 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.11 REMARK 3 ION PROBE RADIUS : NULL REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6ZK6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 29-JUN-20. REMARK 100 THE DEPOSITION ID IS D_1292109541. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-NOV-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : MASSIF-3 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9677 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 4M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26672 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 36.220 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.3 REMARK 200 DATA REDUNDANCY : 3.400 REMARK 200 R MERGE (I) : 0.05700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.94 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.9 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.74400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6G0J REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.26 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.25 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 3350, TRIS , LITHIUM CHLORIDE, PH REMARK 280 8.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 2 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 X,-Y,-Z REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 -X,-Y+1/2,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 34.37450 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 63.92300 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 34.37450 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 63.92300 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 600 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 ASP A 3 REMARK 465 SER A 4 REMARK 465 GLU A 5 REMARK 465 LYS A 6 REMARK 465 LEU A 7 REMARK 465 ALA A 299 REMARK 465 ASP A 300 REMARK 465 LYS A 301 REMARK 465 ASN A 302 REMARK 465 LYS A 303 REMARK 465 GLY A 304 REMARK 465 LYS A 305 REMARK 465 TYR A 306 REMARK 465 GLY A 307 REMARK 465 GLN A 308 REMARK 465 PHE A 309 REMARK 465 SER A 310 REMARK 465 GLY A 311 REMARK 465 LEU A 312 REMARK 465 ASN A 313 REMARK 465 PRO A 314 REMARK 465 GLY A 315 REMARK 465 GLY A 316 REMARK 465 ARG A 317 REMARK 465 PRO A 318 REMARK 465 ILE A 319 REMARK 465 GLU A 320 REMARK 465 PRO A 321 REMARK 465 PRO A 322 REMARK 465 ARG A 323 REMARK 465 ASN A 324 REMARK 465 SER A 325 REMARK 465 ALA A 326 REMARK 465 LYS A 327 REMARK 465 ALA A 328 REMARK 465 LYS A 329 REMARK 465 LYS A 330 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN A 8 CG OD1 ND2 REMARK 470 ARG A 23 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 26 CG CD CE NZ REMARK 470 LYS A 41 CG CD CE NZ REMARK 470 LYS A 98 CG CD CE NZ REMARK 470 LYS A 211 CG CD CE NZ REMARK 470 GLN A 214 CG CD OE1 NE2 REMARK 470 GLU A 218 CG CD OE1 OE2 REMARK 470 GLU A 230 CG CD OE1 OE2 REMARK 470 GLU A 252 CG CD OE1 OE2 REMARK 470 LYS A 260 CG CD CE NZ REMARK 470 GLU A 275 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 95 152.62 79.42 REMARK 500 ARG A 96 -49.64 73.40 REMARK 500 TYR A 144 -104.70 -138.98 REMARK 500 GLU A 167 12.49 59.28 REMARK 500 SER A 224 -147.52 65.69 REMARK 500 ALA A 247 -131.21 -132.17 REMARK 500 HIS A 248 -14.52 82.68 REMARK 500 CSO A 273 39.92 37.81 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 402 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 64 OD2 REMARK 620 2 HIS A 66 NE2 92.0 REMARK 620 3 ASP A 92 OD2 104.4 97.1 REMARK 620 4 PO4 A 405 O1 154.7 84.4 100.9 REMARK 620 5 HOH A 542 O 90.1 165.9 95.8 87.7 REMARK 620 6 HOH A 550 O 79.0 76.2 172.7 75.8 90.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE A 404 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 64 OD2 REMARK 620 2 HIS A 66 NE2 98.4 REMARK 620 3 ASP A 92 OD2 84.0 89.5 REMARK 620 4 PO4 A 405 O1 162.2 97.4 87.9 REMARK 620 5 HOH A 542 O 79.1 162.9 73.4 83.4 REMARK 620 6 HOH A 550 O 91.6 98.0 171.8 94.3 99.0 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 401 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 92 OD2 REMARK 620 2 ASN A 124 OD1 85.8 REMARK 620 3 HIS A 173 NE2 82.4 74.3 REMARK 620 4 HIS A 248 ND1 169.1 90.9 86.7 REMARK 620 5 PO4 A 405 O3 95.3 77.8 152.2 94.2 REMARK 620 6 HOH A 542 O 89.2 167.2 116.7 96.0 90.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE A 403 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 92 OD2 REMARK 620 2 ASN A 124 OD1 98.4 REMARK 620 3 HIS A 173 NE2 86.2 91.4 REMARK 620 4 HIS A 248 ND1 156.0 105.5 91.3 REMARK 620 5 PO4 A 405 O3 91.7 88.5 177.9 90.8 REMARK 620 6 HOH A 542 O 76.3 163.0 104.2 81.3 75.6 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FE A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FE A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 A 405 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6G0J RELATED DB: PDB REMARK 900 WILD-TYPE FE-PP1 IN INACTIVE FORM REMARK 900 RELATED ID: 6G0I RELATED DB: PDB REMARK 900 WILD-TYPE FE-PP1 IN ACTIVE FORM DBREF 6ZK6 A 1 330 UNP P62136 PP1A_HUMAN 1 330 SEQADV 6ZK6 GLY A 0 UNP P62136 EXPRESSION TAG SEQADV 6ZK6 GLU A 320 UNP P62136 THR 320 ENGINEERED MUTATION SEQRES 1 A 331 GLY MET SER ASP SER GLU LYS LEU ASN LEU ASP SER ILE SEQRES 2 A 331 ILE GLY ARG LEU LEU GLU VAL GLN GLY SER ARG PRO GLY SEQRES 3 A 331 LYS ASN VAL GLN LEU THR GLU ASN GLU ILE ARG GLY LEU SEQRES 4 A 331 CYS LEU LYS SER ARG GLU ILE PHE LEU SER GLN PRO ILE SEQRES 5 A 331 LEU LEU GLU LEU GLU ALA PRO LEU LYS ILE CYS GLY ASP SEQRES 6 A 331 ILE HIS GLY GLN TYR TYR ASP LEU LEU ARG LEU PHE GLU SEQRES 7 A 331 TYR GLY GLY PHE PRO PRO GLU SER ASN TYR LEU PHE LEU SEQRES 8 A 331 GLY ASP TYR VAL ASP ARG GLY LYS GLN SER LEU GLU THR SEQRES 9 A 331 ILE CYS LEU LEU LEU ALA TYR LYS ILE LYS TYR PRO GLU SEQRES 10 A 331 ASN PHE PHE LEU LEU ARG GLY ASN HIS GLU CSD ALA SER SEQRES 11 A 331 ILE ASN ARG ILE TYR GLY PHE TYR ASP GLU CYS LYS ARG SEQRES 12 A 331 ARG TYR ASN ILE LYS LEU TRP LYS THR PHE THR ASP CYS SEQRES 13 A 331 PHE ASN CYS LEU PRO ILE ALA ALA ILE VAL ASP GLU LYS SEQRES 14 A 331 ILE PHE CYS CYS HIS GLY GLY LEU SER PRO ASP LEU GLN SEQRES 15 A 331 SER MET GLU GLN ILE ARG ARG ILE MET ARG PRO THR ASP SEQRES 16 A 331 VAL PRO ASP GLN GLY LEU LEU CYS ASP LEU LEU TRP SER SEQRES 17 A 331 ASP PRO ASP LYS ASP VAL GLN GLY TRP GLY GLU ASN ASP SEQRES 18 A 331 ARG GLY VAL SER PHE THR PHE GLY ALA GLU VAL VAL ALA SEQRES 19 A 331 LYS PHE LEU HIS LYS HIS ASP LEU ASP LEU ILE CYS ARG SEQRES 20 A 331 ALA HIS GLN VAL VAL GLU ASP GLY TYR GLU PHE PHE ALA SEQRES 21 A 331 LYS ARG GLN LEU VAL THR LEU PHE SER ALA PRO ASN TYR SEQRES 22 A 331 CSO GLY GLU PHE ASP ASN ALA GLY ALA MET MET SER VAL SEQRES 23 A 331 ASP GLU THR LEU MET CYS SER PHE GLN ILE LEU LYS PRO SEQRES 24 A 331 ALA ASP LYS ASN LYS GLY LYS TYR GLY GLN PHE SER GLY SEQRES 25 A 331 LEU ASN PRO GLY GLY ARG PRO ILE GLU PRO PRO ARG ASN SEQRES 26 A 331 SER ALA LYS ALA LYS LYS MODRES 6ZK6 CSD A 127 CYS MODIFIED RESIDUE MODRES 6ZK6 CSO A 273 CYS MODIFIED RESIDUE HET CSD A 127 8 HET CSO A 273 7 HET MN A 401 1 HET MN A 402 1 HET FE A 403 1 HET FE A 404 1 HET PO4 A 405 5 HETNAM CSD 3-SULFINOALANINE HETNAM CSO S-HYDROXYCYSTEINE HETNAM MN MANGANESE (II) ION HETNAM FE FE (III) ION HETNAM PO4 PHOSPHATE ION HETSYN CSD S-CYSTEINESULFINIC ACID; S-SULFINOCYSTEINE FORMUL 1 CSD C3 H7 N O4 S FORMUL 1 CSO C3 H7 N O3 S FORMUL 2 MN 2(MN 2+) FORMUL 4 FE 2(FE 3+) FORMUL 6 PO4 O4 P 3- FORMUL 7 HOH *128(H2 O) HELIX 1 AA1 ASN A 8 GLU A 18 1 11 HELIX 2 AA2 THR A 31 GLN A 49 1 19 HELIX 3 AA3 GLN A 68 GLY A 80 1 13 HELIX 4 AA4 GLN A 99 TYR A 114 1 16 HELIX 5 AA5 CSD A 127 GLY A 135 1 9 HELIX 6 AA6 GLY A 135 TYR A 144 1 10 HELIX 7 AA7 ASN A 145 ASN A 157 1 13 HELIX 8 AA8 SER A 182 ARG A 188 1 7 HELIX 9 AA9 GLY A 199 SER A 207 1 9 HELIX 10 AB1 GLY A 228 ASP A 240 1 13 HELIX 11 AB2 ASN A 271 GLU A 275 5 5 SHEET 1 AA1 6 LEU A 52 LEU A 55 0 SHEET 2 AA1 6 ALA A 162 VAL A 165 1 O ILE A 164 N LEU A 53 SHEET 3 AA1 6 ILE A 169 CYS A 171 -1 O CYS A 171 N ALA A 163 SHEET 4 AA1 6 LEU A 243 ARG A 246 1 O CYS A 245 N PHE A 170 SHEET 5 AA1 6 LEU A 263 LEU A 266 1 O LEU A 266 N ARG A 246 SHEET 6 AA1 6 TYR A 255 PHE A 258 -1 N GLU A 256 O THR A 265 SHEET 1 AA2 5 PHE A 118 LEU A 120 0 SHEET 2 AA2 5 TYR A 87 PHE A 89 1 N PHE A 89 O PHE A 119 SHEET 3 AA2 5 LEU A 59 CYS A 62 1 N LYS A 60 O LEU A 88 SHEET 4 AA2 5 GLY A 280 VAL A 285 -1 O MET A 283 N ILE A 61 SHEET 5 AA2 5 CYS A 291 LEU A 296 -1 O LEU A 296 N GLY A 280 SHEET 1 AA3 3 ASP A 208 PRO A 209 0 SHEET 2 AA3 3 PHE A 225 PHE A 227 1 O PHE A 227 N ASP A 208 SHEET 3 AA3 3 TRP A 216 GLU A 218 -1 N GLY A 217 O THR A 226 LINK C GLU A 126 N CSD A 127 1555 1555 1.33 LINK C CSD A 127 N ALA A 128 1555 1555 1.33 LINK C TYR A 272 N CSO A 273 1555 1555 1.34 LINK C CSO A 273 N GLY A 274 1555 1555 1.33 LINK OD2 ASP A 64 MN MN A 402 1555 1555 2.02 LINK OD2 ASP A 64 FE FE A 404 1555 1555 2.12 LINK NE2 HIS A 66 MN MN A 402 1555 1555 2.37 LINK NE2 HIS A 66 FE FE A 404 1555 1555 2.05 LINK OD2 ASP A 92 MN MN A 401 1555 1555 2.26 LINK OD2 ASP A 92 MN MN A 402 1555 1555 1.97 LINK OD2 ASP A 92 FE FE A 403 1555 1555 2.30 LINK OD2 ASP A 92 FE FE A 404 1555 1555 2.55 LINK OD1 ASN A 124 MN MN A 401 1555 1555 2.47 LINK OD1 ASN A 124 FE FE A 403 1555 1555 1.95 LINK NE2 HIS A 173 MN MN A 401 1555 1555 2.29 LINK NE2 HIS A 173 FE FE A 403 1555 1555 2.07 LINK ND1 HIS A 248 MN MN A 401 1555 1555 2.19 LINK ND1 HIS A 248 FE FE A 403 1555 1555 2.23 LINK MN MN A 401 O3 PO4 A 405 1555 1555 2.07 LINK MN MN A 401 O HOH A 542 1555 1555 1.81 LINK MN MN A 402 O1 PO4 A 405 1555 1555 2.17 LINK MN MN A 402 O HOH A 542 1555 1555 1.91 LINK MN MN A 402 O HOH A 550 1555 1555 2.58 LINK FE FE A 403 O3 PO4 A 405 1555 1555 2.15 LINK FE FE A 403 O HOH A 542 1555 1555 2.35 LINK FE FE A 404 O1 PO4 A 405 1555 1555 2.01 LINK FE FE A 404 O HOH A 542 1555 1555 2.24 LINK FE FE A 404 O HOH A 550 1555 1555 2.00 CISPEP 1 ALA A 57 PRO A 58 0 2.83 CISPEP 2 PRO A 82 PRO A 83 0 5.27 CISPEP 3 ARG A 191 PRO A 192 0 -4.11 SITE 1 AC1 8 ASP A 92 ASN A 124 HIS A 173 HIS A 248 SITE 2 AC1 8 MN A 402 FE A 404 PO4 A 405 HOH A 542 SITE 1 AC2 8 ASP A 64 HIS A 66 ASP A 92 MN A 401 SITE 2 AC2 8 FE A 403 PO4 A 405 HOH A 542 HOH A 550 SITE 1 AC3 8 ASP A 92 ASN A 124 HIS A 173 HIS A 248 SITE 2 AC3 8 MN A 402 FE A 404 PO4 A 405 HOH A 542 SITE 1 AC4 8 ASP A 64 HIS A 66 ASP A 92 MN A 401 SITE 2 AC4 8 FE A 403 PO4 A 405 HOH A 542 HOH A 550 SITE 1 AC5 16 HIS A 66 ASP A 92 ARG A 96 ASN A 124 SITE 2 AC5 16 HIS A 125 ARG A 221 HIS A 248 MN A 401 SITE 3 AC5 16 MN A 402 FE A 403 FE A 404 HOH A 507 SITE 4 AC5 16 HOH A 508 HOH A 510 HOH A 542 HOH A 550 CRYST1 38.546 68.749 127.846 90.00 90.00 90.00 P 2 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.025943 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014546 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007822 0.00000