HEADER PROTEIN BINDING 30-JUN-20 6ZLB TITLE THIOREDOXIN GLUTATHIONE REDUCTASE FROM SCHISTOSOMA MANSONI IN COMPLEX TITLE 2 WITH INDOLE-3-CARBINOL COMPND MOL_ID: 1; COMPND 2 MOLECULE: THIOREDOXIN GLUTATHIONE REDUCTASE; COMPND 3 CHAIN: A; COMPND 4 EC: 1.8.1.9; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SCHISTOSOMA MANSONI; SOURCE 3 ORGANISM_TAXID: 6183; SOURCE 4 GENE: SMP_048430; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS SECONDARY SITE, FRAGMENT BINDING, REDOX ENZYME, INHIBITOR, PROTEIN KEYWDS 2 BINDING EXPDTA X-RAY DIFFRACTION AUTHOR F.FATA,I.SILVESTRI,D.L.WILLIAMS,F.ANGELUCCI REVDAT 3 31-JAN-24 6ZLB 1 REMARK REVDAT 2 21-JUL-21 6ZLB 1 JRNL REVDAT 1 19-MAY-21 6ZLB 0 JRNL AUTH F.FATA,I.SILVESTRI,M.ARDINI,R.IPPOLITI,L.DI LEANDRO, JRNL AUTH 2 N.DEMITRI,M.POLENTARUTTI,A.DI MATTEO,H.LYU,G.R.J.THATCHER, JRNL AUTH 3 P.A.PETUKHOV,D.L.WILLIAMS,F.ANGELUCCI JRNL TITL PROBING THE SURFACE OF A PARASITE DRUG TARGET THIOREDOXIN JRNL TITL 2 GLUTATHIONE REDUCTASE USING SMALL MOLECULE FRAGMENTS. JRNL REF ACS INFECT DIS. V. 7 1932 2021 JRNL REFN ESSN 2373-8227 JRNL PMID 33950676 JRNL DOI 10.1021/ACSINFECDIS.0C00909 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.11.1_2575: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.00 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 3 NUMBER OF REFLECTIONS : 64098 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.170 REMARK 3 R VALUE (WORKING SET) : 0.168 REMARK 3 FREE R VALUE : 0.200 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.940 REMARK 3 FREE R VALUE TEST SET COUNT : 3167 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 5.3998 - 4.2875 0.99 2655 150 0.1417 0.1561 REMARK 3 2 4.2875 - 3.7460 0.99 2647 153 0.1417 0.1622 REMARK 3 3 3.7460 - 3.4036 0.99 2670 129 0.1504 0.1751 REMARK 3 4 3.4036 - 3.1598 1.00 2659 141 0.1687 0.2099 REMARK 3 5 3.1598 - 2.9735 0.99 2688 129 0.1682 0.1970 REMARK 3 6 2.9735 - 2.8247 0.99 2664 120 0.1689 0.2096 REMARK 3 7 2.8247 - 2.7017 0.99 2675 145 0.1692 0.2086 REMARK 3 8 2.7017 - 2.5977 1.00 2666 129 0.1733 0.2197 REMARK 3 9 2.5977 - 2.5081 1.00 2620 162 0.1767 0.2408 REMARK 3 10 2.5081 - 2.4297 1.00 2664 131 0.1756 0.2399 REMARK 3 11 2.4297 - 2.3603 0.99 2625 143 0.1582 0.2040 REMARK 3 12 2.3603 - 2.2981 0.99 2724 106 0.1636 0.2031 REMARK 3 13 2.2981 - 2.2421 1.00 2639 134 0.1557 0.1922 REMARK 3 14 2.2421 - 2.1911 0.99 2611 169 0.1726 0.2068 REMARK 3 15 2.1911 - 2.1445 0.99 2639 155 0.1747 0.2055 REMARK 3 16 2.1445 - 2.1016 0.99 2651 136 0.1781 0.2267 REMARK 3 17 2.1016 - 2.0619 0.99 2635 146 0.1871 0.2453 REMARK 3 18 2.0619 - 2.0251 0.99 2645 95 0.1968 0.2637 REMARK 3 19 2.0251 - 1.9908 0.99 2660 132 0.2103 0.2387 REMARK 3 20 1.9908 - 1.9587 0.99 2628 136 0.2173 0.2613 REMARK 3 21 1.9587 - 1.9285 0.99 2624 147 0.2220 0.2632 REMARK 3 22 1.9285 - 1.9002 0.95 2527 145 0.2523 0.2967 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.190 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.670 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 4686 REMARK 3 ANGLE : 0.863 6353 REMARK 3 CHIRALITY : 0.053 721 REMARK 3 PLANARITY : 0.006 799 REMARK 3 DIHEDRAL : 13.425 2781 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 6 THROUGH 158 ) REMARK 3 ORIGIN FOR THE GROUP (A): -85.2216 -26.6671 -54.2243 REMARK 3 T TENSOR REMARK 3 T11: 0.3397 T22: 0.3278 REMARK 3 T33: 0.3226 T12: -0.0419 REMARK 3 T13: -0.0098 T23: -0.0500 REMARK 3 L TENSOR REMARK 3 L11: 0.9391 L22: 2.8629 REMARK 3 L33: 2.2485 L12: 0.0069 REMARK 3 L13: 0.0792 L23: 1.7104 REMARK 3 S TENSOR REMARK 3 S11: 0.0144 S12: 0.2997 S13: -0.2959 REMARK 3 S21: -0.3591 S22: 0.1292 S23: -0.1531 REMARK 3 S31: 0.2054 S32: 0.1110 S33: -0.1406 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 159 THROUGH 239 ) REMARK 3 ORIGIN FOR THE GROUP (A): -79.1347 1.3280 -35.8504 REMARK 3 T TENSOR REMARK 3 T11: 0.2023 T22: 0.1872 REMARK 3 T33: 0.2300 T12: 0.0153 REMARK 3 T13: 0.0123 T23: 0.0301 REMARK 3 L TENSOR REMARK 3 L11: 2.7414 L22: 2.0412 REMARK 3 L33: 1.0391 L12: 1.6084 REMARK 3 L13: 1.1431 L23: 0.9613 REMARK 3 S TENSOR REMARK 3 S11: -0.0915 S12: -0.0339 S13: 0.0557 REMARK 3 S21: -0.2006 S22: 0.0371 S23: -0.0125 REMARK 3 S31: -0.1182 S32: -0.0683 S33: 0.0667 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 240 THROUGH 592 ) REMARK 3 ORIGIN FOR THE GROUP (A): -79.7696 -9.3718 -21.2322 REMARK 3 T TENSOR REMARK 3 T11: 0.1844 T22: 0.1931 REMARK 3 T33: 0.2024 T12: 0.0023 REMARK 3 T13: 0.0347 T23: 0.0291 REMARK 3 L TENSOR REMARK 3 L11: 0.7559 L22: 0.6738 REMARK 3 L33: 0.4134 L12: -0.1975 REMARK 3 L13: 0.0574 L23: -0.0512 REMARK 3 S TENSOR REMARK 3 S11: -0.0541 S12: -0.0922 S13: -0.0484 REMARK 3 S21: 0.0832 S22: 0.0741 S23: 0.0797 REMARK 3 S31: -0.0086 S32: -0.1018 S33: -0.0120 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6ZLB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 30-JUN-20. REMARK 100 THE DEPOSITION ID IS D_1292109712. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-MAR-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ELETTRA REMARK 200 BEAMLINE : 11.2C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 64412 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 38.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 3.800 REMARK 200 R MERGE (I) : 0.05400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.94 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.49600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2V6O REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.69 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.21 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 3350 20%, POTASSIUM IODIDE 0.2M, REMARK 280 BISTRIS 0.1M, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 73.87700 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 50.91500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 73.87700 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 50.91500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 12230 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 45910 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -65.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -124.06065 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -55.57515 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A1218 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 PRO A 2 REMARK 465 PRO A 3 REMARK 465 ALA A 4 REMARK 465 ASP A 5 REMARK 465 VAL A 593 REMARK 465 SER A 594 REMARK 465 GLY A 595 REMARK 465 CYS A 596 REMARK 465 SEC A 597 REMARK 465 GLY A 598 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O LEU A 397 H VAL A 400 1.56 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 68 -6.84 81.04 REMARK 500 VAL A 157 33.81 -145.25 REMARK 500 ALA A 256 51.35 -144.02 REMARK 500 ALA A 294 16.80 -146.37 REMARK 500 SER A 318 -79.12 -137.62 REMARK 500 SER A 318 -78.84 -137.80 REMARK 500 GLU A 351 148.71 -172.37 REMARK 500 ASN A 363 39.73 -91.22 REMARK 500 PHE A 474 53.43 -93.45 REMARK 500 ASP A 530 50.38 -118.70 REMARK 500 HIS A 582 -19.59 -144.82 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1261 DISTANCE = 5.85 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K A 606 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 PRO A 443 O REMARK 620 2 HOH A 777 O 114.9 REMARK 620 3 HOH A1015 O 106.8 99.5 REMARK 620 4 HOH A1207 O 109.5 125.1 97.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K A 605 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLN A 447 OE1 REMARK 620 2 ASP A 565 O 152.9 REMARK 620 3 THR A 567 O 159.1 6.3 REMARK 620 4 THR A 579 O 152.9 8.7 9.0 REMARK 620 5 HOH A1015 O 90.1 97.6 94.9 89.0 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FAD A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FXK A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DMS A 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PGE A 604 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue K A 605 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue K A 606 DBREF 6ZLB A 1 598 UNP G4V8J4 G4V8J4_SCHMA 1 598 SEQRES 1 A 598 MET PRO PRO ALA ASP GLY THR SER GLN TRP LEU ARG LYS SEQRES 2 A 598 THR VAL ASP SER ALA ALA VAL ILE LEU PHE SER LYS THR SEQRES 3 A 598 THR CYS PRO TYR CYS LYS LYS VAL LYS ASP VAL LEU ALA SEQRES 4 A 598 GLU ALA LYS ILE LYS HIS ALA THR ILE GLU LEU ASP GLN SEQRES 5 A 598 LEU SER ASN GLY SER ALA ILE GLN LYS CYS LEU ALA SER SEQRES 6 A 598 PHE SER LYS ILE GLU THR VAL PRO GLN MET PHE VAL ARG SEQRES 7 A 598 GLY LYS PHE ILE GLY ASP SER GLN THR VAL LEU LYS TYR SEQRES 8 A 598 TYR SER ASN ASP GLU LEU ALA GLY ILE VAL ASN GLU SER SEQRES 9 A 598 LYS TYR ASP TYR ASP LEU ILE VAL ILE GLY GLY GLY SER SEQRES 10 A 598 GLY GLY LEU ALA ALA GLY LYS GLU ALA ALA LYS TYR GLY SEQRES 11 A 598 ALA LYS THR ALA VAL LEU ASP TYR VAL GLU PRO THR PRO SEQRES 12 A 598 ILE GLY THR THR TRP GLY LEU GLY GLY THR CYS VAL ASN SEQRES 13 A 598 VAL GLY CYS ILE PRO LYS LYS LEU MET HIS GLN ALA GLY SEQRES 14 A 598 LEU LEU SER HIS ALA LEU GLU ASP ALA GLU HIS PHE GLY SEQRES 15 A 598 TRP SER LEU ASP ARG SER LYS ILE SER HIS ASN TRP SER SEQRES 16 A 598 THR MET VAL GLU GLY VAL GLN SER HIS ILE GLY SER LEU SEQRES 17 A 598 ASN TRP GLY TYR LYS VAL ALA LEU ARG ASP ASN GLN VAL SEQRES 18 A 598 THR TYR LEU ASN ALA LYS GLY ARG LEU ILE SER PRO HIS SEQRES 19 A 598 GLU VAL GLN ILE THR ASP LYS ASN GLN LYS VAL SER THR SEQRES 20 A 598 ILE THR GLY ASN LYS ILE ILE LEU ALA THR GLY GLU ARG SEQRES 21 A 598 PRO LYS TYR PRO GLU ILE PRO GLY ALA VAL GLU TYR GLY SEQRES 22 A 598 ILE THR SER ASP ASP LEU PHE SER LEU PRO TYR PHE PRO SEQRES 23 A 598 GLY LYS THR LEU VAL ILE GLY ALA SER TYR VAL ALA LEU SEQRES 24 A 598 GLU CYS ALA GLY PHE LEU ALA SER LEU GLY GLY ASP VAL SEQRES 25 A 598 THR VAL MET VAL ARG SER ILE LEU LEU ARG GLY PHE ASP SEQRES 26 A 598 GLN GLN MET ALA GLU LYS VAL GLY ASP TYR MET GLU ASN SEQRES 27 A 598 HIS GLY VAL LYS PHE ALA LYS LEU CYS VAL PRO ASP GLU SEQRES 28 A 598 ILE LYS GLN LEU LYS VAL VAL ASP THR GLU ASN ASN LYS SEQRES 29 A 598 PRO GLY LEU LEU LEU VAL LYS GLY HIS TYR THR ASP GLY SEQRES 30 A 598 LYS LYS PHE GLU GLU GLU PHE GLU THR VAL ILE PHE ALA SEQRES 31 A 598 VAL GLY ARG GLU PRO GLN LEU SER LYS VAL LEU CYS GLU SEQRES 32 A 598 THR VAL GLY VAL LYS LEU ASP LYS ASN GLY ARG VAL VAL SEQRES 33 A 598 CYS THR ASP ASP GLU GLN THR THR VAL SER ASN VAL TYR SEQRES 34 A 598 ALA ILE GLY ASP ILE ASN ALA GLY LYS PRO GLN LEU THR SEQRES 35 A 598 PRO VAL ALA ILE GLN ALA GLY ARG TYR LEU ALA ARG ARG SEQRES 36 A 598 LEU PHE ALA GLY ALA THR GLU LEU THR ASP TYR SER ASN SEQRES 37 A 598 VAL ALA THR THR VAL PHE THR PRO LEU GLU TYR GLY ALA SEQRES 38 A 598 CYS GLY LEU SER GLU GLU ASP ALA ILE GLU LYS TYR GLY SEQRES 39 A 598 ASP LYS ASP ILE GLU VAL TYR HIS SER ASN PHE LYS PRO SEQRES 40 A 598 LEU GLU TRP THR VAL ALA HIS ARG GLU ASP ASN VAL CYS SEQRES 41 A 598 TYR MET LYS LEU VAL CYS ARG LYS SER ASP ASN MET ARG SEQRES 42 A 598 VAL LEU GLY LEU HIS VAL LEU GLY PRO ASN ALA GLY GLU SEQRES 43 A 598 ILE THR GLN GLY TYR ALA VAL ALA ILE LYS MET GLY ALA SEQRES 44 A 598 THR LYS ALA ASP PHE ASP ARG THR ILE GLY ILE HIS PRO SEQRES 45 A 598 THR CYS SER GLU THR PHE THR THR LEU HIS VAL THR LYS SEQRES 46 A 598 LYS SER GLY VAL SER PRO ILE VAL SER GLY CYS SEC GLY HET FAD A 601 84 HET FXK A 602 20 HET DMS A 603 10 HET PGE A 604 24 HET K A 605 1 HET K A 606 1 HETNAM FAD FLAVIN-ADENINE DINUCLEOTIDE HETNAM FXK 1~{H}-INDOL-3-YLMETHANOL HETNAM DMS DIMETHYL SULFOXIDE HETNAM PGE TRIETHYLENE GLYCOL HETNAM K POTASSIUM ION FORMUL 2 FAD C27 H33 N9 O15 P2 FORMUL 3 FXK C9 H9 N O FORMUL 4 DMS C2 H6 O S FORMUL 5 PGE C6 H14 O4 FORMUL 6 K 2(K 1+) FORMUL 8 HOH *561(H2 O) HELIX 1 AA1 GLY A 6 ALA A 18 1 13 HELIX 2 AA2 CYS A 28 ALA A 41 1 14 HELIX 3 AA3 ASP A 51 LEU A 53 5 3 HELIX 4 AA4 ASN A 55 LEU A 63 1 9 HELIX 5 AA5 LEU A 63 LYS A 68 1 6 HELIX 6 AA6 ASP A 84 ASN A 94 1 11 HELIX 7 AA7 GLU A 96 GLU A 103 1 8 HELIX 8 AA8 GLY A 116 TYR A 129 1 14 HELIX 9 AA9 GLY A 151 GLY A 158 1 8 HELIX 10 AB1 GLY A 158 PHE A 181 1 24 HELIX 11 AB2 ASP A 186 ILE A 190 5 5 HELIX 12 AB3 ASN A 193 ASN A 219 1 27 HELIX 13 AB4 GLY A 268 GLY A 273 1 6 HELIX 14 AB5 SER A 276 PHE A 280 1 5 HELIX 15 AB6 SER A 295 LEU A 308 1 14 HELIX 16 AB7 ASP A 325 HIS A 339 1 15 HELIX 17 AB8 LEU A 397 VAL A 400 5 4 HELIX 18 AB9 CYS A 402 GLY A 406 5 5 HELIX 19 AC1 GLY A 432 ASN A 435 5 4 HELIX 20 AC2 LEU A 441 ALA A 458 1 18 HELIX 21 AC3 SER A 485 GLY A 494 1 10 HELIX 22 AC4 PRO A 507 THR A 511 5 5 HELIX 23 AC5 SER A 529 ASN A 531 5 3 HELIX 24 AC6 ASN A 543 MET A 557 1 15 HELIX 25 AC7 THR A 560 THR A 567 1 8 HELIX 26 AC8 CYS A 574 THR A 580 5 7 SHEET 1 AA1 4 ALA A 46 GLU A 49 0 SHEET 2 AA1 4 VAL A 20 SER A 24 1 N SER A 24 O ILE A 48 SHEET 3 AA1 4 GLN A 74 VAL A 77 -1 O GLN A 74 N PHE A 23 SHEET 4 AA1 4 LYS A 80 GLY A 83 -1 O ILE A 82 N MET A 75 SHEET 1 AA2 6 THR A 222 LEU A 224 0 SHEET 2 AA2 6 THR A 133 LEU A 136 1 N VAL A 135 O THR A 222 SHEET 3 AA2 6 TYR A 108 ILE A 113 1 N VAL A 112 O ALA A 134 SHEET 4 AA2 6 VAL A 245 LEU A 255 1 O ILE A 254 N ILE A 113 SHEET 5 AA2 6 GLU A 235 ASP A 240 -1 N VAL A 236 O ILE A 248 SHEET 6 AA2 6 ALA A 226 SER A 232 -1 N ARG A 229 O GLN A 237 SHEET 1 AA3 5 THR A 222 LEU A 224 0 SHEET 2 AA3 5 THR A 133 LEU A 136 1 N VAL A 135 O THR A 222 SHEET 3 AA3 5 TYR A 108 ILE A 113 1 N VAL A 112 O ALA A 134 SHEET 4 AA3 5 VAL A 245 LEU A 255 1 O ILE A 254 N ILE A 113 SHEET 5 AA3 5 VAL A 428 ALA A 430 1 O TYR A 429 N LEU A 255 SHEET 1 AA4 2 GLU A 259 PRO A 261 0 SHEET 2 AA4 2 ARG A 393 PRO A 395 -1 O GLU A 394 N ARG A 260 SHEET 1 AA5 5 ILE A 274 THR A 275 0 SHEET 2 AA5 5 THR A 386 PHE A 389 1 O PHE A 389 N ILE A 274 SHEET 3 AA5 5 THR A 289 ILE A 292 1 N ILE A 292 O ILE A 388 SHEET 4 AA5 5 VAL A 312 VAL A 316 1 O THR A 313 N VAL A 291 SHEET 5 AA5 5 VAL A 341 LYS A 345 1 O ALA A 344 N VAL A 314 SHEET 1 AA6 3 CYS A 347 LYS A 356 0 SHEET 2 AA6 3 LEU A 367 TYR A 374 -1 O LYS A 371 N ASP A 350 SHEET 3 AA6 3 LYS A 379 PHE A 384 -1 O PHE A 384 N LEU A 368 SHEET 1 AA7 5 THR A 471 VAL A 473 0 SHEET 2 AA7 5 TYR A 479 GLY A 483 -1 O TYR A 479 N VAL A 473 SHEET 3 AA7 5 VAL A 534 LEU A 540 -1 O VAL A 539 N GLY A 480 SHEET 4 AA7 5 CYS A 520 ARG A 527 -1 N TYR A 521 O LEU A 540 SHEET 5 AA7 5 ILE A 498 PHE A 505 -1 N GLU A 499 O CYS A 526 SSBOND 1 CYS A 28 CYS A 31 1555 1555 2.06 SSBOND 2 CYS A 154 CYS A 159 1555 1555 2.01 LINK O PRO A 443 K K A 606 1555 1555 2.87 LINK OE1 GLN A 447 K K A 605 1555 1555 2.73 LINK O ASP A 565 K K A 605 1555 2454 2.64 LINK O THR A 567 K K A 605 1555 2454 2.59 LINK O THR A 579 K K A 605 1555 2454 2.67 LINK K K A 605 O HOH A1015 1555 2454 2.84 LINK K K A 606 O HOH A 777 1555 1555 2.77 LINK K K A 606 O HOH A1015 1555 2454 2.82 LINK K K A 606 O HOH A1207 1555 2454 2.68 CISPEP 1 VAL A 72 PRO A 73 0 0.49 CISPEP 2 HIS A 571 PRO A 572 0 -2.22 SITE 1 AC1 37 GLY A 114 GLY A 115 GLY A 116 SER A 117 SITE 2 AC1 37 GLY A 118 ASP A 137 TYR A 138 GLY A 152 SITE 3 AC1 37 THR A 153 CYS A 154 VAL A 157 GLY A 158 SITE 4 AC1 37 CYS A 159 LYS A 162 ALA A 226 LYS A 227 SITE 5 AC1 37 GLY A 228 ALA A 256 THR A 257 GLY A 258 SITE 6 AC1 37 TYR A 296 VAL A 297 ARG A 393 VAL A 400 SITE 7 AC1 37 GLY A 432 ASP A 433 GLN A 440 LEU A 441 SITE 8 AC1 37 THR A 442 PRO A 443 HIS A 571 HOH A 715 SITE 9 AC1 37 HOH A 716 HOH A 794 HOH A 836 HOH A 897 SITE 10 AC1 37 HOH A 975 SITE 1 AC2 7 LEU A 320 GLU A 330 GLY A 333 ASP A 334 SITE 2 AC2 7 GLU A 337 PHE A 343 LYS A 345 SITE 1 AC3 3 PRO A 143 VAL A 270 GLU A 271 SITE 1 AC4 9 GLN A 327 LYS A 331 HIS A 502 TYR A 521 SITE 2 AC4 9 LYS A 585 PRO A 591 HOH A 737 HOH A 771 SITE 3 AC4 9 HOH A1099 SITE 1 AC5 5 GLN A 447 ASP A 565 THR A 567 THR A 579 SITE 2 AC5 5 HOH A1015 SITE 1 AC6 5 PRO A 443 GLN A 447 HOH A 777 HOH A1015 SITE 2 AC6 5 HOH A1207 CRYST1 147.754 101.830 60.415 90.00 113.09 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006768 0.000000 0.002885 0.00000 SCALE2 0.000000 0.009820 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017994 0.00000