HEADER TRANSFERASE 02-JUL-20 6ZMD TITLE CRYSTAL STRUCTURE OF HYPE COVALENTLY TETHERED TO BIP BOUND TO AMP-PNP COMPND MOL_ID: 1; COMPND 2 MOLECULE: ENDOPLASMIC RETICULUM CHAPERONE BIP; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: 78 KDA GLUCOSE-REGULATED PROTEIN,GRP-78,BINDING- COMPND 5 IMMUNOGLOBULIN PROTEIN,BIP,HEAT SHOCK PROTEIN 70 FAMILY PROTEIN 5, COMPND 6 HSP70 FAMILY PROTEIN 5,HEAT SHOCK PROTEIN FAMILY A MEMBER 5, COMPND 7 IMMUNOGLOBULIN HEAVY CHAIN-BINDING PROTEIN; COMPND 8 EC: 3.6.4.10; COMPND 9 ENGINEERED: YES; COMPND 10 MUTATION: YES; COMPND 11 MOL_ID: 2; COMPND 12 MOLECULE: PROTEIN ADENYLYLTRANSFERASE FICD; COMPND 13 CHAIN: B; COMPND 14 SYNONYM: AMPYLATOR FICD,DE-AMPYLASE FICD,FIC DOMAIN-CONTAINING COMPND 15 PROTEIN,HUNTINGTIN YEAST PARTNER E,HUNTINGTIN-INTERACTING PROTEIN 13, COMPND 16 HIP-13,HUNTINGTIN-INTERACTING PROTEIN E; COMPND 17 EC: 2.7.7.-,3.1.4.-; COMPND 18 ENGINEERED: YES; COMPND 19 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: HSPA5, GRP78; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: FICD, HIP13, HYPE, UNQ3041/PRO9857; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS AMPYLATION, ENDOPLASMIC RETICULUM, FIC ENZYME, CHAPERONE, POST- KEYWDS 2 TRANSLATIONAL MODIFICATION, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR J.FAUSER,B.GULEN,C.PETT,C.HEDBERG,A.ITZEN,V.POGENBERG REVDAT 3 31-JAN-24 6ZMD 1 REMARK REVDAT 2 06-OCT-21 6ZMD 1 JRNL REVDAT 1 14-APR-21 6ZMD 0 JRNL AUTH J.FAUSER,B.GULEN,V.POGENBERG,C.PETT,D.POURJAFAR-DEHKORDI, JRNL AUTH 2 C.KRISP,D.HOPFNER,G.KONIG,H.SCHLUTER,M.J.FEIGE,M.ZACHARIAS, JRNL AUTH 3 C.HEDBERG,A.ITZEN JRNL TITL SPECIFICITY OF AMPYLATION OF THE HUMAN CHAPERONE BIP IS JRNL TITL 2 MEDIATED BY TPR MOTIFS OF FICD. JRNL REF NAT COMMUN V. 12 2426 2021 JRNL REFN ESSN 2041-1723 JRNL PMID 33893288 JRNL DOI 10.1038/S41467-021-22596-0 REMARK 2 REMARK 2 RESOLUTION. 2.64 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.16_3549 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.64 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.73 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 33948 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.194 REMARK 3 R VALUE (WORKING SET) : 0.192 REMARK 3 FREE R VALUE : 0.235 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.850 REMARK 3 FREE R VALUE TEST SET COUNT : 1647 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 41.7300 - 6.0400 1.00 2732 121 0.1506 0.2111 REMARK 3 2 6.0400 - 4.8000 1.00 2705 145 0.1810 0.2210 REMARK 3 3 4.8000 - 4.1900 1.00 2686 137 0.1599 0.1942 REMARK 3 4 4.1900 - 3.8100 1.00 2658 178 0.1734 0.2225 REMARK 3 5 3.8100 - 3.5300 1.00 2718 131 0.1926 0.2279 REMARK 3 6 3.5300 - 3.3300 1.00 2686 132 0.2180 0.2471 REMARK 3 7 3.3300 - 3.1600 1.00 2690 150 0.2291 0.2449 REMARK 3 8 3.1600 - 3.0200 1.00 2686 112 0.2414 0.3054 REMARK 3 9 3.0200 - 2.9100 1.00 2677 130 0.2624 0.3306 REMARK 3 10 2.9100 - 2.8100 1.00 2706 134 0.2692 0.3015 REMARK 3 11 2.8100 - 2.7200 1.00 2690 120 0.2620 0.2790 REMARK 3 12 2.7200 - 2.6400 1.00 2667 157 0.2829 0.3346 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.348 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.217 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 59.60 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 73.52 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 6901 REMARK 3 ANGLE : 0.390 9342 REMARK 3 CHIRALITY : 0.040 1065 REMARK 3 PLANARITY : 0.003 1210 REMARK 3 DIHEDRAL : 10.708 4192 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 11 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 26 THROUGH 105 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.8852 32.3263 -3.8943 REMARK 3 T TENSOR REMARK 3 T11: 0.5373 T22: 0.4755 REMARK 3 T33: 0.3663 T12: -0.0451 REMARK 3 T13: -0.0806 T23: -0.0085 REMARK 3 L TENSOR REMARK 3 L11: 2.3775 L22: 4.5253 REMARK 3 L33: 4.4882 L12: -0.2386 REMARK 3 L13: 0.5333 L23: 1.3374 REMARK 3 S TENSOR REMARK 3 S11: 0.1404 S12: 0.4321 S13: -0.1151 REMARK 3 S21: -0.7978 S22: 0.1011 S23: -0.1359 REMARK 3 S31: 0.1703 S32: 0.4435 S33: -0.2366 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 106 THROUGH 161 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.9216 23.7852 -10.1480 REMARK 3 T TENSOR REMARK 3 T11: 0.8476 T22: 0.4959 REMARK 3 T33: 0.4018 T12: 0.0265 REMARK 3 T13: -0.0553 T23: -0.0591 REMARK 3 L TENSOR REMARK 3 L11: 2.5906 L22: 4.0452 REMARK 3 L33: 6.0381 L12: -0.0048 REMARK 3 L13: 1.1795 L23: 2.1553 REMARK 3 S TENSOR REMARK 3 S11: 0.2370 S12: 0.5990 S13: -0.3823 REMARK 3 S21: -0.9823 S22: 0.0217 S23: -0.1044 REMARK 3 S31: 0.6383 S32: 0.6491 S33: -0.3017 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 162 THROUGH 229 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.0061 25.1240 10.6852 REMARK 3 T TENSOR REMARK 3 T11: 0.3319 T22: 0.2313 REMARK 3 T33: 0.3534 T12: -0.0311 REMARK 3 T13: -0.0973 T23: 0.0286 REMARK 3 L TENSOR REMARK 3 L11: 4.2688 L22: 2.8241 REMARK 3 L33: 4.6745 L12: -0.5145 REMARK 3 L13: -0.2697 L23: -0.1369 REMARK 3 S TENSOR REMARK 3 S11: 0.0282 S12: 0.0553 S13: -0.1221 REMARK 3 S21: -0.2794 S22: 0.1997 S23: 0.2606 REMARK 3 S31: 0.4358 S32: 0.0423 S33: -0.2306 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 230 THROUGH 317 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.7585 29.8321 -9.5994 REMARK 3 T TENSOR REMARK 3 T11: 0.7270 T22: 0.5294 REMARK 3 T33: 0.6467 T12: -0.1101 REMARK 3 T13: -0.3222 T23: 0.0382 REMARK 3 L TENSOR REMARK 3 L11: 1.3247 L22: 2.2529 REMARK 3 L33: 3.4558 L12: -0.8724 REMARK 3 L13: 1.1811 L23: -0.1246 REMARK 3 S TENSOR REMARK 3 S11: 0.2667 S12: 0.3416 S13: -0.2508 REMARK 3 S21: -1.0061 S22: 0.0315 S23: 0.5218 REMARK 3 S31: 0.2886 S32: -0.1307 S33: -0.2760 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 318 THROUGH 392 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.7273 27.1201 6.0469 REMARK 3 T TENSOR REMARK 3 T11: 0.4238 T22: 0.5468 REMARK 3 T33: 0.8223 T12: -0.1007 REMARK 3 T13: -0.2372 T23: 0.1539 REMARK 3 L TENSOR REMARK 3 L11: 2.1808 L22: 2.3268 REMARK 3 L33: 3.3089 L12: -0.6189 REMARK 3 L13: 0.3706 L23: -0.7627 REMARK 3 S TENSOR REMARK 3 S11: 0.0020 S12: -0.1550 S13: -0.3096 REMARK 3 S21: -0.2966 S22: 0.3932 S23: 0.9027 REMARK 3 S31: 0.1667 S32: -0.7304 S33: -0.3221 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 393 THROUGH 431 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.7633 20.6708 15.5129 REMARK 3 T TENSOR REMARK 3 T11: 0.4822 T22: 0.3582 REMARK 3 T33: 0.4121 T12: 0.0256 REMARK 3 T13: -0.0981 T23: -0.0005 REMARK 3 L TENSOR REMARK 3 L11: 1.7178 L22: 1.6485 REMARK 3 L33: 2.0073 L12: -0.8606 REMARK 3 L13: 0.1917 L23: -1.4836 REMARK 3 S TENSOR REMARK 3 S11: -0.0552 S12: -0.2823 S13: -0.0766 REMARK 3 S21: -0.2769 S22: 0.1969 S23: 0.1572 REMARK 3 S31: 0.2715 S32: -0.0506 S33: -0.1084 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 432 THROUGH 515 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.4690 -2.2080 9.5043 REMARK 3 T TENSOR REMARK 3 T11: 1.1369 T22: 0.4692 REMARK 3 T33: 0.6536 T12: 0.0256 REMARK 3 T13: -0.1320 T23: -0.0237 REMARK 3 L TENSOR REMARK 3 L11: 2.7699 L22: 7.3441 REMARK 3 L33: 1.8395 L12: -2.3058 REMARK 3 L13: -0.2321 L23: 0.0998 REMARK 3 S TENSOR REMARK 3 S11: -0.1554 S12: 0.2086 S13: -0.6730 REMARK 3 S21: 0.0160 S22: 0.2775 S23: 0.0458 REMARK 3 S31: 1.2864 S32: 0.1491 S33: -0.0943 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 516 THROUGH 548 ) REMARK 3 ORIGIN FOR THE GROUP (A): 35.5071 8.6900 1.4659 REMARK 3 T TENSOR REMARK 3 T11: 0.9775 T22: 0.7926 REMARK 3 T33: 0.7927 T12: 0.1768 REMARK 3 T13: 0.0202 T23: -0.1318 REMARK 3 L TENSOR REMARK 3 L11: 1.6605 L22: 6.2263 REMARK 3 L33: 4.7960 L12: 1.0722 REMARK 3 L13: -1.1041 L23: -4.0572 REMARK 3 S TENSOR REMARK 3 S11: 0.4522 S12: 0.1694 S13: -0.2554 REMARK 3 S21: -0.4602 S22: -0.5872 S23: -0.4599 REMARK 3 S31: 0.6929 S32: 0.8992 S33: 0.0536 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 102 THROUGH 234 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.7545 0.8091 38.3679 REMARK 3 T TENSOR REMARK 3 T11: 0.5889 T22: 0.5057 REMARK 3 T33: 0.3615 T12: 0.0129 REMARK 3 T13: -0.0068 T23: 0.0033 REMARK 3 L TENSOR REMARK 3 L11: 0.3382 L22: 3.1906 REMARK 3 L33: 1.1774 L12: 0.0778 REMARK 3 L13: 0.0725 L23: 1.8683 REMARK 3 S TENSOR REMARK 3 S11: 0.0227 S12: -0.0367 S13: -0.0770 REMARK 3 S21: 0.7590 S22: -0.0126 S23: 0.2821 REMARK 3 S31: 0.4542 S32: -0.1812 S33: -0.0161 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 235 THROUGH 347 ) REMARK 3 ORIGIN FOR THE GROUP (A): 31.9204 -28.9165 31.1896 REMARK 3 T TENSOR REMARK 3 T11: 0.8403 T22: 0.4664 REMARK 3 T33: 0.7704 T12: 0.0830 REMARK 3 T13: -0.3418 T23: -0.0934 REMARK 3 L TENSOR REMARK 3 L11: 2.0058 L22: 4.6611 REMARK 3 L33: 3.2979 L12: 0.6846 REMARK 3 L13: -0.0145 L23: 1.8812 REMARK 3 S TENSOR REMARK 3 S11: 0.2420 S12: -0.3562 S13: 0.0938 REMARK 3 S21: 1.1446 S22: 0.2687 S23: -1.2303 REMARK 3 S31: 0.4240 S32: 0.3949 S33: -0.4642 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 348 THROUGH 433 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.5338 -17.3494 36.0000 REMARK 3 T TENSOR REMARK 3 T11: 0.8614 T22: 0.3606 REMARK 3 T33: 0.5113 T12: -0.0219 REMARK 3 T13: -0.2117 T23: -0.0355 REMARK 3 L TENSOR REMARK 3 L11: 3.6404 L22: 7.5752 REMARK 3 L33: 3.5246 L12: -0.5356 REMARK 3 L13: 0.0072 L23: 3.4355 REMARK 3 S TENSOR REMARK 3 S11: 0.3115 S12: -0.0507 S13: 0.0638 REMARK 3 S21: 1.4273 S22: 0.0345 S23: -0.4556 REMARK 3 S31: 0.5662 S32: 0.0220 S33: -0.2543 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6ZMD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 03-JUL-20. REMARK 100 THE DEPOSITION ID IS D_1292109748. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-AUG-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PETRA III, EMBL C/O DESY REMARK 200 BEAMLINE : P13 (MX1) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.976250 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DIALS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 34024 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.640 REMARK 200 RESOLUTION RANGE LOW (A) : 83.470 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : 0.05700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.64 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.77 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.56700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MORDA REMARK 200 STARTING MODEL: 4U04, 5O4P REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.49 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.04 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M NACL, 0.1 M NA/K PHOSPHATE PH REMARK 280 6.2 AND 10% (W/V) PEG 8000, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y,X,Z+1/4 REMARK 290 4555 Y,-X,Z+3/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 84.74100 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 42.37050 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 127.11150 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4200 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 37680 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -44.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 23 REMARK 465 ALA A 24 REMARK 465 MET A 25 REMARK 465 ALA A 549 REMARK 465 THR B 434 REMARK 465 GLU B 435 REMARK 465 TYR B 436 REMARK 465 SER B 437 REMARK 465 VAL B 438 REMARK 465 ALA B 439 REMARK 465 LEU B 440 REMARK 465 PRO B 441 REMARK 465 GLU B 442 REMARK 465 ALA B 443 REMARK 465 GLN B 444 REMARK 465 PRO B 445 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 124 18.51 57.99 REMARK 500 ASP A 238 82.96 -160.43 REMARK 500 LEU A 417 72.71 -104.03 REMARK 500 LEU A 436 -66.54 -94.41 REMARK 500 LYS A 547 37.23 -85.92 REMARK 500 THR B 277 -37.75 -137.22 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 603 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 34 OD2 REMARK 620 2 TYR A 39 O 108.9 REMARK 620 3 ANP A 601 O1B 147.6 80.7 REMARK 620 4 ANP A 601 O2A 138.7 110.8 52.5 REMARK 620 5 HOH A 710 O 72.4 146.1 82.7 81.0 REMARK 620 6 HOH A 733 O 90.5 103.3 118.1 69.7 110.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 604 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 201 OE1 REMARK 620 2 ASP A 224 OD1 105.4 REMARK 620 3 ASP A 224 OD2 66.7 60.6 REMARK 620 4 ANP A 601 O3G 78.7 149.4 141.9 REMARK 620 5 HOH A 701 O 163.0 91.6 124.7 86.2 REMARK 620 6 HOH A 716 O 96.5 75.4 124.0 74.0 86.8 REMARK 620 7 HOH A 721 O 84.4 125.7 76.6 84.7 86.4 158.0 REMARK 620 N 1 2 3 4 5 6 DBREF 6ZMD A 28 549 UNP P11021 BIP_HUMAN 28 549 DBREF 6ZMD B 102 445 UNP Q9BVA6 FICD_HUMAN 102 445 SEQADV 6ZMD GLY A 23 UNP P11021 EXPRESSION TAG SEQADV 6ZMD ALA A 24 UNP P11021 EXPRESSION TAG SEQADV 6ZMD MET A 25 UNP P11021 EXPRESSION TAG SEQADV 6ZMD GLY A 26 UNP P11021 EXPRESSION TAG SEQADV 6ZMD SER A 27 UNP P11021 EXPRESSION TAG SEQADV 6ZMD ALA A 229 UNP P11021 THR 229 ENGINEERED MUTATION SEQADV 6ZMD ALA B 168 UNP Q9BVA6 THR 168 ENGINEERED MUTATION SEQADV 6ZMD ALA B 183 UNP Q9BVA6 THR 183 ENGINEERED MUTATION SEQADV 6ZMD GLY B 234 UNP Q9BVA6 GLU 234 ENGINEERED MUTATION SEQADV 6ZMD ASP B 258 UNP Q9BVA6 LEU 258 ENGINEERED MUTATION SEQADV 6ZMD CYS B 404 UNP Q9BVA6 GLU 404 ENGINEERED MUTATION SEQRES 1 A 527 GLY ALA MET GLY SER GLY THR VAL VAL GLY ILE ASP LEU SEQRES 2 A 527 GLY THR THR TYR SER CYS VAL GLY VAL PHE LYS ASN GLY SEQRES 3 A 527 ARG VAL GLU ILE ILE ALA ASN ASP GLN GLY ASN ARG ILE SEQRES 4 A 527 THR PRO SER TYR VAL ALA PHE THR PRO GLU GLY GLU ARG SEQRES 5 A 527 LEU ILE GLY ASP ALA ALA LYS ASN GLN LEU THR SER ASN SEQRES 6 A 527 PRO GLU ASN THR VAL PHE ASP ALA LYS ARG LEU ILE GLY SEQRES 7 A 527 ARG THR TRP ASN ASP PRO SER VAL GLN GLN ASP ILE LYS SEQRES 8 A 527 PHE LEU PRO PHE LYS VAL VAL GLU LYS LYS THR LYS PRO SEQRES 9 A 527 TYR ILE GLN VAL ASP ILE GLY GLY GLY GLN THR LYS THR SEQRES 10 A 527 PHE ALA PRO GLU GLU ILE SER ALA MET VAL LEU THR LYS SEQRES 11 A 527 MET LYS GLU THR ALA GLU ALA TYR LEU GLY LYS LYS VAL SEQRES 12 A 527 THR HIS ALA VAL VAL THR VAL PRO ALA TYR PHE ASN ASP SEQRES 13 A 527 ALA GLN ARG GLN ALA THR LYS ASP ALA GLY THR ILE ALA SEQRES 14 A 527 GLY LEU ASN VAL MET ARG ILE ILE ASN GLU PRO THR ALA SEQRES 15 A 527 ALA ALA ILE ALA TYR GLY LEU ASP LYS ARG GLU GLY GLU SEQRES 16 A 527 LYS ASN ILE LEU VAL PHE ASP LEU GLY GLY GLY ALA PHE SEQRES 17 A 527 ASP VAL SER LEU LEU THR ILE ASP ASN GLY VAL PHE GLU SEQRES 18 A 527 VAL VAL ALA THR ASN GLY ASP THR HIS LEU GLY GLY GLU SEQRES 19 A 527 ASP PHE ASP GLN ARG VAL MET GLU HIS PHE ILE LYS LEU SEQRES 20 A 527 TYR LYS LYS LYS THR GLY LYS ASP VAL ARG LYS ASP ASN SEQRES 21 A 527 ARG ALA VAL GLN LYS LEU ARG ARG GLU VAL GLU LYS ALA SEQRES 22 A 527 LYS ARG ALA LEU SER SER GLN HIS GLN ALA ARG ILE GLU SEQRES 23 A 527 ILE GLU SER PHE TYR GLU GLY GLU ASP PHE SER GLU THR SEQRES 24 A 527 LEU THR ARG ALA LYS PHE GLU GLU LEU ASN MET ASP LEU SEQRES 25 A 527 PHE ARG SER THR MET LYS PRO VAL GLN LYS VAL LEU GLU SEQRES 26 A 527 ASP SER ASP LEU LYS LYS SER ASP ILE ASP GLU ILE VAL SEQRES 27 A 527 LEU VAL GLY GLY SER THR ARG ILE PRO LYS ILE GLN GLN SEQRES 28 A 527 LEU VAL LYS GLU PHE PHE ASN GLY LYS GLU PRO SER ARG SEQRES 29 A 527 GLY ILE ASN PRO ASP GLU ALA VAL ALA TYR GLY ALA ALA SEQRES 30 A 527 VAL GLN ALA GLY VAL LEU SER GLY ASP GLN ASP THR GLY SEQRES 31 A 527 ASP LEU VAL LEU LEU ASP VAL CYS PRO LEU THR LEU GLY SEQRES 32 A 527 ILE GLU THR VAL GLY GLY VAL MET THR LYS LEU ILE PRO SEQRES 33 A 527 ARG ASN THR VAL VAL PRO THR LYS LYS SER GLN ILE PHE SEQRES 34 A 527 SER THR ALA SER ASP ASN GLN PRO THR VAL THR ILE LYS SEQRES 35 A 527 VAL TYR GLU GLY GLU ARG PRO LEU THR LYS ASP ASN HIS SEQRES 36 A 527 LEU LEU GLY THR PHE ASP LEU THR GLY ILE PRO PRO ALA SEQRES 37 A 527 PRO ARG GLY VAL PRO GLN ILE GLU VAL THR PHE GLU ILE SEQRES 38 A 527 ASP VAL ASN GLY ILE LEU ARG VAL THR ALA GLU ASP LYS SEQRES 39 A 527 GLY THR GLY ASN LYS ASN LYS ILE THR ILE THR ASN ASP SEQRES 40 A 527 GLN ASN ARG LEU THR PRO GLU GLU ILE GLU ARG MET VAL SEQRES 41 A 527 ASN ASP ALA GLU LYS PHE ALA SEQRES 1 B 344 GLY LYS LEU GLU ALA ARG ALA ALA LEU ASN GLN ALA LEU SEQRES 2 B 344 GLU MET LYS ARG GLN GLY LYS ARG GLU LYS ALA GLN LYS SEQRES 3 B 344 LEU PHE MET HIS ALA LEU LYS MET ASP PRO ASP PHE VAL SEQRES 4 B 344 ASP ALA LEU THR GLU PHE GLY ILE PHE SER GLU GLU ASP SEQRES 5 B 344 LYS ASP ILE ILE GLN ALA ASP TYR LEU TYR THR ARG ALA SEQRES 6 B 344 LEU ALA ILE SER PRO TYR HIS GLU LYS ALA LEU VAL ASN SEQRES 7 B 344 ARG ASP ARG ALA LEU PRO LEU VAL GLU GLU ILE ASP GLN SEQRES 8 B 344 ARG TYR PHE SER ILE ILE ASP SER LYS VAL LYS LYS VAL SEQRES 9 B 344 MET SER ILE PRO LYS GLY ASN SER ALA LEU ARG ARG VAL SEQRES 10 B 344 MET GLU GLU THR TYR TYR HIS HIS ILE TYR HIS THR VAL SEQRES 11 B 344 ALA ILE GLY GLY ASN THR LEU THR LEU SER GLU ILE ARG SEQRES 12 B 344 HIS ILE LEU GLU THR ARG TYR ALA VAL PRO GLY LYS SER SEQRES 13 B 344 ASP GLU GLU GLN ASN GLU VAL ILE GLY MET HIS ALA ALA SEQRES 14 B 344 MET LYS TYR ILE ASN THR THR LEU VAL SER ARG ILE GLY SEQRES 15 B 344 SER VAL THR ILE SER ASP VAL LEU GLU ILE HIS ARG ARG SEQRES 16 B 344 VAL LEU GLY TYR VAL ASP PRO VAL GLU ALA GLY ARG PHE SEQRES 17 B 344 ARG THR THR GLN VAL LEU VAL GLY HIS HIS ILE PRO PRO SEQRES 18 B 344 HIS PRO GLN ASP VAL GLU LYS GLN MET GLN GLU PHE VAL SEQRES 19 B 344 GLN TRP LEU ASN SER GLU GLU ALA MET ASN LEU HIS PRO SEQRES 20 B 344 VAL GLU PHE ALA ALA LEU ALA HIS TYR LYS LEU VAL TYR SEQRES 21 B 344 ILE HIS PRO PHE ILE ASP GLY ASN GLY ARG THR SER ARG SEQRES 22 B 344 LEU LEU MET ASN LEU ILE LEU MET GLN ALA GLY TYR PRO SEQRES 23 B 344 PRO ILE THR ILE ARG LYS GLU GLN ARG SER ASP TYR TYR SEQRES 24 B 344 HIS VAL LEU CYS ALA ALA ASN GLU GLY ASP VAL ARG PRO SEQRES 25 B 344 PHE ILE ARG PHE ILE ALA LYS CYS THR GLU THR THR LEU SEQRES 26 B 344 ASP THR LEU LEU PHE ALA THR THR GLU TYR SER VAL ALA SEQRES 27 B 344 LEU PRO GLU ALA GLN PRO HET ANP A 601 31 HET QMK A 602 23 HET MG A 603 1 HET MG A 604 1 HET PO4 A 605 5 HET PO4 B 501 5 HETNAM ANP PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER HETNAM QMK ~{N}-[2-[1-[(2~{R},3~{R},4~{S},5~{R})-3,4- HETNAM 2 QMK BIS(OXIDANYL)-5-[[TRIS(OXIDANYL)-$L^{5}- HETNAM 3 QMK PHOSPHANYL]OXYMETHYL]OXOLAN-2-YL]-1,2,3-TRIAZOL-4- HETNAM 4 QMK YL]ETHYL]ETHANAMIDE HETNAM MG MAGNESIUM ION HETNAM PO4 PHOSPHATE ION FORMUL 3 ANP C10 H17 N6 O12 P3 FORMUL 4 QMK C11 H19 N4 O8 P FORMUL 5 MG 2(MG 2+) FORMUL 7 PO4 2(O4 P 3-) FORMUL 9 HOH *74(H2 O) HELIX 1 AA1 GLY A 77 GLN A 83 1 7 HELIX 2 AA2 ALA A 95 LEU A 98 5 4 HELIX 3 AA3 ASP A 105 LYS A 113 1 9 HELIX 4 AA4 ALA A 141 GLY A 162 1 22 HELIX 5 AA5 ASN A 177 ALA A 191 1 15 HELIX 6 AA6 GLU A 201 GLY A 210 1 10 HELIX 7 AA7 GLY A 254 GLY A 275 1 22 HELIX 8 AA8 ASP A 277 LYS A 280 5 4 HELIX 9 AA9 ASP A 281 LEU A 299 1 19 HELIX 10 AB1 ARG A 324 ASN A 331 1 8 HELIX 11 AB2 ASN A 331 THR A 338 1 8 HELIX 12 AB3 THR A 338 ASP A 350 1 13 HELIX 13 AB4 LYS A 352 ILE A 356 5 5 HELIX 14 AB5 GLY A 363 ARG A 367 5 5 HELIX 15 AB6 ILE A 368 PHE A 379 1 12 HELIX 16 AB7 GLU A 392 SER A 406 1 15 HELIX 17 AB8 LEU A 472 ASN A 476 5 5 HELIX 18 AB9 THR A 534 LYS A 547 1 14 HELIX 19 AC1 LYS B 103 GLN B 119 1 17 HELIX 20 AC2 LYS B 121 ASP B 136 1 16 HELIX 21 AC3 PHE B 139 ASP B 153 1 15 HELIX 22 AC4 ASP B 155 SER B 170 1 16 HELIX 23 AC5 HIS B 173 MET B 206 1 34 HELIX 24 AC6 ASN B 212 ILE B 233 1 22 HELIX 25 AC7 THR B 239 ARG B 250 1 12 HELIX 26 AC8 SER B 257 LEU B 278 1 22 HELIX 27 AC9 THR B 286 LEU B 298 1 13 HELIX 28 AD1 HIS B 323 LEU B 338 1 16 HELIX 29 AD2 SER B 340 LEU B 346 1 7 HELIX 30 AD3 HIS B 347 HIS B 363 1 17 HELIX 31 AD4 GLY B 368 ALA B 384 1 17 HELIX 32 AD5 ARG B 392 GLU B 394 5 3 HELIX 33 AD6 GLN B 395 GLU B 408 1 14 HELIX 34 AD7 VAL B 411 PHE B 431 1 21 SHEET 1 AA1 3 ARG A 49 ILE A 52 0 SHEET 2 AA1 3 TYR A 39 LYS A 46 -1 N VAL A 44 O GLU A 51 SHEET 3 AA1 3 THR A 62 PRO A 63 -1 O THR A 62 N SER A 40 SHEET 1 AA2 5 ARG A 49 ILE A 52 0 SHEET 2 AA2 5 TYR A 39 LYS A 46 -1 N VAL A 44 O GLU A 51 SHEET 3 AA2 5 VAL A 31 LEU A 35 -1 N ASP A 34 O CYS A 41 SHEET 4 AA2 5 HIS A 167 VAL A 172 1 O VAL A 169 N ILE A 33 SHEET 5 AA2 5 ASN A 194 ASN A 200 1 O ILE A 199 N VAL A 172 SHEET 1 AA3 3 ARG A 74 ILE A 76 0 SHEET 2 AA3 3 TYR A 65 PHE A 68 -1 N ALA A 67 O LEU A 75 SHEET 3 AA3 3 THR A 91 PHE A 93 -1 O VAL A 92 N VAL A 66 SHEET 1 AA4 3 LYS A 118 LYS A 122 0 SHEET 2 AA4 3 LYS A 125 ASP A 131 -1 O TYR A 127 N VAL A 120 SHEET 3 AA4 3 THR A 137 PHE A 140 -1 O PHE A 140 N ILE A 128 SHEET 1 AA5 5 GLU A 358 VAL A 362 0 SHEET 2 AA5 5 GLU A 217 LEU A 225 1 N PHE A 223 O VAL A 360 SHEET 3 AA5 5 PHE A 230 ASP A 238 -1 O ASP A 231 N ASP A 224 SHEET 4 AA5 5 VAL A 241 ASP A 250 -1 O VAL A 245 N LEU A 234 SHEET 5 AA5 5 VAL A 415 LEU A 417 1 O LEU A 417 N PHE A 242 SHEET 1 AA6 2 GLN A 304 TYR A 313 0 SHEET 2 AA6 2 GLU A 316 THR A 323 -1 O LEU A 322 N ALA A 305 SHEET 1 AA7 5 MET A 433 ILE A 437 0 SHEET 2 AA7 5 LEU A 424 GLU A 427 -1 N LEU A 424 O LEU A 436 SHEET 3 AA7 5 VAL A 461 GLU A 467 -1 O TYR A 466 N GLY A 425 SHEET 4 AA7 5 HIS A 477 THR A 485 -1 O HIS A 477 N GLU A 467 SHEET 5 AA7 5 THR A 525 ASN A 528 -1 O THR A 525 N THR A 485 SHEET 1 AA8 3 THR A 445 PHE A 451 0 SHEET 2 AA8 3 ILE A 497 ILE A 503 -1 O PHE A 501 N LYS A 447 SHEET 3 AA8 3 LEU A 509 ASP A 515 -1 O THR A 512 N THR A 500 LINK OG1 THR A 518 P1 QMK A 602 1555 1555 1.56 LINK C1 QMK A 602 SG CYS B 404 1555 1555 1.77 LINK OD2 ASP A 34 MG MG A 603 1555 1555 2.23 LINK O TYR A 39 MG MG A 603 1555 1555 2.08 LINK OE1 GLU A 201 MG MG A 604 1555 1555 2.10 LINK OD1 ASP A 224 MG MG A 604 1555 1555 2.18 LINK OD2 ASP A 224 MG MG A 604 1555 1555 2.16 LINK O1B ANP A 601 MG MG A 603 1555 1555 2.42 LINK O2A ANP A 601 MG MG A 603 1555 1555 2.75 LINK O3G ANP A 601 MG MG A 604 1555 1555 2.52 LINK MG MG A 603 O HOH A 710 1555 1555 2.08 LINK MG MG A 603 O HOH A 733 1555 1555 2.09 LINK MG MG A 604 O HOH A 701 1555 1555 2.05 LINK MG MG A 604 O HOH A 716 1555 1555 2.09 LINK MG MG A 604 O HOH A 721 1555 1555 2.09 CISPEP 1 VAL A 443 PRO A 444 0 -0.76 CRYST1 83.466 83.466 169.482 90.00 90.00 90.00 P 41 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011981 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011981 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005900 0.00000