HEADER HYDROLASE 06-JUL-20 6ZNS TITLE CRYSTAL STRUCTURE OF DUF1998 HELICASE MRFA COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED ATP-DEPENDENT HELICASE YPRA; COMPND 3 CHAIN: A; COMPND 4 EC: 3.6.4.-; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS SUBTILIS SUBSP. SUBTILIS STR. 168; SOURCE 3 ORGANISM_TAXID: 224308; SOURCE 4 GENE: YPRA, BSU22220; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PETM11 KEYWDS DNA, REPAIR, HELICASE, MRFA, YPRA, DUF1998, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR J.J.ROSKE,S.LIU,B.LOLL,U.NEU,M.C.WAHL REVDAT 5 01-MAY-24 6ZNS 1 REMARK REVDAT 4 20-JAN-21 6ZNS 1 JRNL REVDAT 3 23-DEC-20 6ZNS 1 JRNL REVDAT 2 16-DEC-20 6ZNS 1 JRNL REVDAT 1 25-NOV-20 6ZNS 0 JRNL AUTH J.J.ROSKE,S.LIU,B.LOLL,U.NEU,M.C.WAHL JRNL TITL A SKIPPING ROPE TRANSLOCATION MECHANISM IN A WIDESPREAD JRNL TITL 2 FAMILY OF DNA REPAIR HELICASES. JRNL REF NUCLEIC ACIDS RES. V. 49 504 2021 JRNL REFN ESSN 1362-4962 JRNL PMID 33300032 JRNL DOI 10.1093/NAR/GKAA1174 REMARK 2 REMARK 2 RESOLUTION. 3.32 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.18.1_3865 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.32 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.99 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.920 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 13371 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.309 REMARK 3 R VALUE (WORKING SET) : 0.307 REMARK 3 FREE R VALUE : 0.342 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 669 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.9900 - 5.6700 1.00 2543 134 0.2678 0.2926 REMARK 3 2 5.6600 - 4.5000 1.00 2554 135 0.3075 0.3613 REMARK 3 3 4.5000 - 3.9300 1.00 2542 134 0.3187 0.3632 REMARK 3 4 3.9300 - 3.5700 1.00 2566 135 0.3612 0.3947 REMARK 3 5 3.5700 - 3.3200 0.99 2497 131 0.5121 0.5283 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.900 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 44.703 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 140.8 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 128.2 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 5150 REMARK 3 ANGLE : 0.527 6954 REMARK 3 CHIRALITY : 0.042 784 REMARK 3 PLANARITY : 0.004 892 REMARK 3 DIHEDRAL : 16.738 1922 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6ZNS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 06-JUL-20. REMARK 100 THE DEPOSITION ID IS D_1292109615. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-NOV-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PETRA III, DESY REMARK 200 BEAMLINE : P11 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0332 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13373 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.310 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 10.50 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.0400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.32 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.52 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.980 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: D_1292109739 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.33 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.75 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M TRIS-HCL, PH 7.5, 0.2 M MGCL2, REMARK 280 10 % (W/V) PEG 4,000, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 X+2/3,Y+1/3,Z+1/3 REMARK 290 5555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 6555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 7555 X+1/3,Y+2/3,Z+2/3 REMARK 290 8555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 9555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 95.97150 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 55.40917 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 21.96400 REMARK 290 SMTRY1 5 -0.500000 -0.866025 0.000000 95.97150 REMARK 290 SMTRY2 5 0.866025 -0.500000 0.000000 55.40917 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 21.96400 REMARK 290 SMTRY1 6 -0.500000 0.866025 0.000000 95.97150 REMARK 290 SMTRY2 6 -0.866025 -0.500000 0.000000 55.40917 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 21.96400 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 110.81834 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 43.92800 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 110.81834 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 43.92800 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 110.81834 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 43.92800 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 0 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 35060 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 ALA A 0 REMARK 465 MET A 1 REMARK 465 LYS A 2 REMARK 465 LYS A 3 REMARK 465 LYS A 4 REMARK 465 SER A 5 REMARK 465 LEU A 6 REMARK 465 THR A 7 REMARK 465 GLU A 8 REMARK 465 LEU A 9 REMARK 465 ILE A 10 REMARK 465 SER A 11 REMARK 465 ASP A 12 REMARK 465 LEU A 13 REMARK 465 LYS A 14 REMARK 465 GLY A 15 REMARK 465 ASN A 16 REMARK 465 GLU A 17 REMARK 465 ASN A 18 REMARK 465 VAL A 19 REMARK 465 VAL A 20 REMARK 465 ASN A 21 REMARK 465 TRP A 22 REMARK 465 HIS A 23 REMARK 465 GLU A 24 REMARK 465 ILE A 25 REMARK 465 GLU A 26 REMARK 465 PRO A 27 REMARK 465 ARG A 28 REMARK 465 GLU A 29 REMARK 465 ALA A 30 REMARK 465 LYS A 31 REMARK 465 THR A 32 REMARK 465 ARG A 33 REMARK 465 PRO A 34 REMARK 465 ASN A 246 REMARK 465 GLY A 247 REMARK 465 ALA A 248 REMARK 465 ILE A 262 REMARK 465 VAL A 263 REMARK 465 ASN A 264 REMARK 465 LYS A 265 REMARK 465 PRO A 266 REMARK 465 LEU A 267 REMARK 465 ASN A 268 REMARK 465 ILE A 269 REMARK 465 ARG A 270 REMARK 465 ARG A 271 REMARK 465 SER A 272 REMARK 465 THR A 318 REMARK 465 LYS A 319 REMARK 465 SER A 320 REMARK 465 ILE A 321 REMARK 465 ARG A 322 REMARK 465 GLY A 323 REMARK 465 TYR A 324 REMARK 465 LEU A 346 REMARK 465 GLY A 347 REMARK 465 VAL A 348 REMARK 465 VAL A 349 REMARK 465 SER A 350 REMARK 465 THR A 351 REMARK 465 ASN A 352 REMARK 465 ALA A 353 REMARK 465 LEU A 354 REMARK 465 GLU A 355 REMARK 465 LEU A 356 REMARK 465 GLY A 357 REMARK 465 ILE A 395 REMARK 465 PRO A 419 REMARK 465 GLU A 420 REMARK 465 SER A 421 REMARK 465 ALA A 422 REMARK 465 ARG A 423 REMARK 465 LEU A 469 REMARK 465 HIS A 470 REMARK 465 ARG A 471 REMARK 465 TYR A 558 REMARK 465 TYR A 559 REMARK 465 THR A 560 REMARK 465 ILE A 601 REMARK 465 LYS A 602 REMARK 465 MET A 603 REMARK 465 THR A 604 REMARK 465 THR A 605 REMARK 465 PHE A 606 REMARK 465 GLU A 607 REMARK 465 ASN A 608 REMARK 465 ILE A 609 REMARK 465 GLY A 610 REMARK 465 GLU A 629 REMARK 465 ILE A 630 REMARK 465 LYS A 631 REMARK 465 THR A 632 REMARK 465 ALA A 633 REMARK 465 ASP A 634 REMARK 465 GLU A 635 REMARK 465 ASP A 636 REMARK 465 ILE A 637 REMARK 465 GLY A 638 REMARK 465 SER A 672 REMARK 465 GLN A 673 REMARK 465 ILE A 674 REMARK 465 THR A 683 REMARK 465 ILE A 684 REMARK 465 THR A 730 REMARK 465 GLU A 731 REMARK 465 ILE A 732 REMARK 465 GLU A 733 REMARK 465 GLY A 734 REMARK 465 ILE A 735 REMARK 465 ASP A 746 REMARK 465 GLN A 747 REMARK 465 MET A 748 REMARK 465 SER A 749 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG SER A 624 OD2 ASP A 688 2.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 55 93.21 -68.33 REMARK 500 LYS A 82 -127.37 35.32 REMARK 500 ASP A 129 82.96 -68.50 REMARK 500 ASP A 136 -167.21 -125.74 REMARK 500 ASP A 138 66.05 -112.22 REMARK 500 LYS A 171 0.41 -68.95 REMARK 500 GLU A 186 79.19 53.95 REMARK 500 SER A 214 76.12 -161.97 REMARK 500 SER A 222 -141.60 -152.13 REMARK 500 ALA A 223 -152.27 -156.65 REMARK 500 THR A 236 -7.13 77.84 REMARK 500 GLU A 342 30.81 -146.96 REMARK 500 PRO A 372 28.36 -76.16 REMARK 500 ASP A 448 0.89 -162.79 REMARK 500 ALA A 453 -155.76 -101.94 REMARK 500 GLU A 455 67.44 -165.04 REMARK 500 LEU A 463 98.58 -68.48 REMARK 500 GLN A 464 -159.46 -126.65 REMARK 500 TYR A 476 81.61 -68.72 REMARK 500 SER A 486 -103.03 40.50 REMARK 500 ILE A 488 77.96 -65.45 REMARK 500 SER A 492 49.14 -161.73 REMARK 500 ILE A 512 -75.82 -112.70 REMARK 500 GLU A 527 73.63 57.05 REMARK 500 GLU A 533 73.62 57.65 REMARK 500 ASP A 543 98.72 -66.90 REMARK 500 LYS A 547 75.18 60.24 REMARK 500 LEU A 564 144.58 -177.15 REMARK 500 GLN A 567 -173.03 -69.96 REMARK 500 LEU A 571 -73.43 -129.35 REMARK 500 GLU A 578 34.11 -149.12 REMARK 500 ARG A 581 -33.62 66.07 REMARK 500 LEU A 594 119.69 -173.11 REMARK 500 THR A 596 -103.82 57.50 REMARK 500 ASP A 667 -91.33 -78.28 REMARK 500 HIS A 717 35.79 -87.16 REMARK 500 PRO A 719 81.71 -69.21 REMARK 500 CYS A 720 -162.03 -162.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 801 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 718 SG REMARK 620 2 CYS A 720 SG 72.8 REMARK 620 3 CYS A 724 N 132.7 76.6 REMARK 620 4 CYS A 724 SG 148.8 112.1 76.6 REMARK 620 5 CYS A 727 SG 127.7 146.0 69.9 66.1 REMARK 620 N 1 2 3 4 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6ZNP RELATED DB: PDB REMARK 900 CONTAINS THE SAME PROTEIN BOUND TO SSDNA REMARK 900 RELATED ID: 6ZNQ RELATED DB: PDB REMARK 900 CONTAINS THE SAME PROTEIN BOUND TO SSDNA AND AMPPNP DBREF 6ZNS A 1 749 UNP P50830 YPRA_BACSU 1 749 SEQADV 6ZNS GLY A -1 UNP P50830 EXPRESSION TAG SEQADV 6ZNS ALA A 0 UNP P50830 EXPRESSION TAG SEQRES 1 A 751 GLY ALA MET LYS LYS LYS SER LEU THR GLU LEU ILE SER SEQRES 2 A 751 ASP LEU LYS GLY ASN GLU ASN VAL VAL ASN TRP HIS GLU SEQRES 3 A 751 ILE GLU PRO ARG GLU ALA LYS THR ARG PRO MET PRO GLU SEQRES 4 A 751 SER ILE ASP GLU ARG ILE LYS ALA ALA LEU SER LYS ARG SEQRES 5 A 751 GLY ILE ASP GLU LEU TYR THR HIS GLN TYR SER ALA PHE SEQRES 6 A 751 GLN TYR VAL GLN LYS GLY GLU SER ILE VAL THR VAL THR SEQRES 7 A 751 PRO THR ALA SER GLY LYS THR LEU CYS TYR ASN LEU PRO SEQRES 8 A 751 VAL LEU GLN SER ILE ALA GLN ASP GLU THR ASN ARG ALA SEQRES 9 A 751 LEU TYR LEU PHE PRO THR LYS ALA LEU ALA GLN ASP GLN SEQRES 10 A 751 LYS SER GLU LEU ASN GLU ILE ILE ASP GLU MET GLY ILE SEQRES 11 A 751 ASP ILE LYS SER PHE THR TYR ASP GLY ASP THR SER PRO SEQRES 12 A 751 ALA ILE ARG GLN LYS VAL ARG LYS ALA GLY HIS ILE VAL SEQRES 13 A 751 ILE THR ASN PRO ASP MET LEU HIS SER ALA ILE LEU PRO SEQRES 14 A 751 HIS HIS THR LYS TRP VAL SER LEU PHE GLU ASN LEU LYS SEQRES 15 A 751 TYR ILE VAL ILE ASP GLU LEU HIS THR TYR ARG GLY VAL SEQRES 16 A 751 PHE GLY SER HIS VAL ALA ASN VAL ILE ARG ARG LEU LYS SEQRES 17 A 751 ARG ILE CYS ARG PHE TYR GLY SER ASP PRO VAL PHE ILE SEQRES 18 A 751 CYS THR SER ALA THR ILE ALA ASN PRO LYS GLU LEU GLY SEQRES 19 A 751 GLU GLN LEU THR GLY LYS PRO MET ARG LEU VAL ASP ASP SEQRES 20 A 751 ASN GLY ALA PRO SER GLY ARG LYS HIS PHE VAL PHE TYR SEQRES 21 A 751 ASN PRO PRO ILE VAL ASN LYS PRO LEU ASN ILE ARG ARG SEQRES 22 A 751 SER ALA THR ALA GLU VAL ASN GLU LEU ALA LYS GLU PHE SEQRES 23 A 751 LEU LYS ASN LYS VAL GLN THR ILE VAL PHE ALA ARG SER SEQRES 24 A 751 ARG VAL ARG VAL GLU ILE ILE LEU SER HIS ILE GLN GLU SEQRES 25 A 751 LEU VAL LYS LYS GLU ILE GLY THR LYS SER ILE ARG GLY SEQRES 26 A 751 TYR ARG GLY GLY TYR LEU PRO LYS GLU ARG ARG GLU ILE SEQRES 27 A 751 GLU ARG GLY LEU ARG GLU GLY ASP ILE LEU GLY VAL VAL SEQRES 28 A 751 SER THR ASN ALA LEU GLU LEU GLY VAL ASP ILE GLY GLN SEQRES 29 A 751 LEU GLN VAL CYS VAL MET THR GLY TYR PRO GLY SER VAL SEQRES 30 A 751 ALA SER ALA TRP GLN GLN ALA GLY ARG ALA GLY ARG ARG SEQRES 31 A 751 HIS GLY GLU SER LEU ILE ILE MET VAL ALA ASN SER THR SEQRES 32 A 751 PRO ILE ASP GLN TYR ILE VAL ARG HIS PRO GLU TYR PHE SEQRES 33 A 751 PHE ASN ARG SER PRO GLU SER ALA ARG ILE ASN PRO GLU SEQRES 34 A 751 ASN LEU ILE ILE LEU VAL ASP HIS LEU LYS CYS ALA ALA SEQRES 35 A 751 TYR GLU LEU PRO PHE ARG ALA ASP GLU GLU PHE GLY ALA SEQRES 36 A 751 MET GLU VAL SER ASP ILE LEU GLU TYR LEU GLN GLU GLU SEQRES 37 A 751 ALA VAL LEU HIS ARG ASN GLY GLU ARG TYR HIS TRP ALA SEQRES 38 A 751 SER GLU SER PHE PRO ALA SER ASN ILE SER LEU ARG SER SEQRES 39 A 751 ALA SER GLN GLU ASN VAL VAL ILE VAL ASP GLN SER ASP SEQRES 40 A 751 ILE ALA ASN VAL ARG ILE ILE GLY GLU MET ASP ARG PHE SEQRES 41 A 751 SER ALA MET THR LEU LEU HIS ASP GLU ALA ILE TYR LEU SEQRES 42 A 751 HIS GLU GLY VAL GLN TYR GLN VAL GLU LYS LEU ASP TRP SEQRES 43 A 751 ASP HIS LYS LYS ALA TYR VAL ARG LYS VAL ASP VAL GLU SEQRES 44 A 751 TYR TYR THR ASP ALA ASN LEU ALA VAL GLN LEU LYS VAL SEQRES 45 A 751 LEU GLU ILE ASP LYS THR LYS GLU LYS SER ARG THR SER SEQRES 46 A 751 LEU HIS TYR GLY ASP VAL THR VAL ASN ALA LEU PRO THR SEQRES 47 A 751 ILE PHE LYS LYS ILE LYS MET THR THR PHE GLU ASN ILE SEQRES 48 A 751 GLY SER GLY PRO ILE HIS LEU PRO GLU GLU GLU LEU HIS SEQRES 49 A 751 THR SER ALA ALA TRP LEU GLU ILE LYS THR ALA ASP GLU SEQRES 50 A 751 ASP ILE GLY GLU LYS THR LEU GLU GLN LEU LEU LEU GLY SEQRES 51 A 751 ILE SER ASN VAL LEU GLN HIS ILE VAL PRO VAL TYR ILE SEQRES 52 A 751 MET CYS ASP ARG ASN ASP VAL HIS VAL VAL SER GLN ILE SEQRES 53 A 751 LYS ALA ALA HIS THR GLY LEU PRO THR ILE PHE LEU TYR SEQRES 54 A 751 ASP HIS TYR PRO GLY GLY ILE GLY LEU ALA GLU GLU VAL SEQRES 55 A 751 PHE LYS ARG PHE SER ASP ILE ASN GLU ALA ALA LYS GLN SEQRES 56 A 751 LEU ILE THR HIS CYS PRO CYS HIS ASP GLY CYS PRO SER SEQRES 57 A 751 CYS ILE GLY THR GLU ILE GLU GLY ILE LYS ALA LYS GLU SEQRES 58 A 751 ARG ILE LEU GLN LEU LEU ASP GLN MET SER HET ZN A 801 1 HETNAM ZN ZINC ION FORMUL 2 ZN ZN 2+ HELIX 1 AA1 ASP A 40 GLY A 51 1 12 HELIX 2 AA2 TYR A 56 LYS A 68 1 13 HELIX 3 AA3 THR A 83 ASP A 97 1 15 HELIX 4 AA4 THR A 108 GLY A 127 1 20 HELIX 5 AA5 SER A 140 GLY A 151 1 12 HELIX 6 AA6 ASN A 157 ILE A 165 1 9 HELIX 7 AA7 HIS A 168 LYS A 171 5 4 HELIX 8 AA8 TRP A 172 GLU A 177 1 6 HELIX 9 AA9 GLU A 186 TYR A 190 5 5 HELIX 10 AB1 ARG A 191 GLY A 213 1 23 HELIX 11 AB2 ASN A 227 LEU A 235 1 9 HELIX 12 AB3 THR A 274 ASN A 287 1 14 HELIX 13 AB4 SER A 297 GLY A 317 1 21 HELIX 14 AB5 LEU A 329 GLY A 343 1 15 HELIX 15 AB6 SER A 374 ARG A 384 1 11 HELIX 16 AB7 THR A 401 HIS A 410 1 10 HELIX 17 AB8 PRO A 411 PHE A 414 5 4 HELIX 18 AB9 ASN A 428 LEU A 443 1 16 HELIX 19 AC1 ASP A 458 TYR A 462 5 5 HELIX 20 AC2 ASP A 516 LEU A 523 1 8 HELIX 21 AC3 GLU A 578 THR A 582 5 5 HELIX 22 AC4 LYS A 640 MET A 662 1 23 HELIX 23 AC5 ALA A 697 HIS A 717 1 21 HELIX 24 AC6 ALA A 737 LEU A 745 1 9 SHEET 1 AA1 7 SER A 132 THR A 134 0 SHEET 2 AA1 7 ILE A 153 THR A 156 1 O ILE A 153 N PHE A 133 SHEET 3 AA1 7 ARG A 101 LEU A 105 1 N TYR A 104 O VAL A 154 SHEET 4 AA1 7 LEU A 179 ILE A 184 1 O VAL A 183 N LEU A 103 SHEET 5 AA1 7 VAL A 217 THR A 221 1 O ILE A 219 N ILE A 182 SHEET 6 AA1 7 ILE A 72 THR A 74 1 N ILE A 72 O CYS A 220 SHEET 7 AA1 7 ARG A 241 VAL A 243 1 O ARG A 241 N VAL A 73 SHEET 1 AA2 2 LYS A 253 PHE A 255 0 SHEET 2 AA2 2 SER A 392 ILE A 394 1 O SER A 392 N HIS A 254 SHEET 1 AA3 2 THR A 291 VAL A 293 0 SHEET 2 AA3 2 VAL A 365 VAL A 367 1 O VAL A 367 N ILE A 292 SHEET 1 AA4 5 ILE A 511 MET A 515 0 SHEET 2 AA4 5 VAL A 498 ASP A 502 -1 N ILE A 500 O GLY A 513 SHEET 3 AA4 5 LYS A 548 LYS A 553 1 O VAL A 551 N VAL A 501 SHEET 4 AA4 5 VAL A 535 ASP A 543 -1 N GLN A 538 O ARG A 552 SHEET 5 AA4 5 TYR A 530 HIS A 532 -1 N TYR A 530 O TYR A 537 SHEET 1 AA5 4 LEU A 568 LYS A 575 0 SHEET 2 AA5 4 HIS A 585 VAL A 591 -1 O TYR A 586 N LYS A 575 SHEET 3 AA5 4 LEU A 621 TRP A 627 -1 O THR A 623 N VAL A 589 SHEET 4 AA5 4 LEU A 686 TYR A 687 -1 O LEU A 686 N ALA A 626 SHEET 1 AA6 2 ILE A 597 PHE A 598 0 SHEET 2 AA6 2 GLY A 612 PRO A 613 -1 O GLY A 612 N PHE A 598 SSBOND 1 CYS A 718 CYS A 720 1555 1555 2.78 SSBOND 2 CYS A 724 CYS A 727 1555 1555 2.55 LINK SG CYS A 718 ZN ZN A 801 1555 1555 2.34 LINK SG CYS A 720 ZN ZN A 801 1555 1555 2.35 LINK N CYS A 724 ZN ZN A 801 1555 1555 2.62 LINK SG CYS A 724 ZN ZN A 801 1555 1555 2.33 LINK SG CYS A 727 ZN ZN A 801 1555 1555 2.35 CRYST1 191.943 191.943 65.892 90.00 90.00 120.00 H 3 9 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005210 0.003008 0.000000 0.00000 SCALE2 0.000000 0.006016 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015176 0.00000