HEADER PROTEIN BINDING 17-JUL-20 6ZT4 TITLE PENTAPEPTIDE REPEAT PROTEIN MFPA FROM MYCOBACTERIUM SMEGMATIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: PENTAPEPTIDE REPEAT PROTEIN MFPA; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: MYCOBACTERIAL FLUOROQUINONE RESISTANCE PENTAPEPTIDE,ORF3; COMPND 5 ENGINEERED: YES; COMPND 6 OTHER_DETAILS: FULL WILD-TYPE SEQUENCE WITH A SERINE RESIDUE APPENDED COMPND 7 TO THE N-TERMINUS LEFT AFTER CLEAVAGE OF THE AFFINITY TAG SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOLICIBACTERIUM SMEGMATIS (STRAIN ATCC 700084 SOURCE 3 / MC(2)155); SOURCE 4 ORGANISM_TAXID: 246196; SOURCE 5 STRAIN: ATCC 700084 / MC(2)155; SOURCE 6 GENE: MFPA, MSMEG_1641, MSMEI_1602; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS PENTAPEPTIDE REPEAT PROTEIN, FLUOROQUINOLONE RESISTANCE, DNA GYRASE, KEYWDS 2 DNA MIMICRY, RIGHT-HANDED QUADRILATERAL BETA-HELIX, PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR L.FENG,J.E.A.MUNDY,C.E.M.STEVENSON,L.A.MITCHENALL,D.M.LAWSON,K.MI, AUTHOR 2 A.MAXWELL REVDAT 3 31-JAN-24 6ZT4 1 REMARK REVDAT 2 21-APR-21 6ZT4 1 JRNL REVDAT 1 03-MAR-21 6ZT4 0 JRNL AUTH L.FENG,J.E.A.MUNDY,C.E.M.STEVENSON,L.A.MITCHENALL, JRNL AUTH 2 D.M.LAWSON,K.MI,A.MAXWELL JRNL TITL THE PENTAPEPTIDE-REPEAT PROTEIN, MFPA, INTERACTS WITH JRNL TITL 2 MYCOBACTERIAL DNA GYRASE AS A DNA T-SEGMENT MIMIC. JRNL REF PROC.NATL.ACAD.SCI.USA V. 118 2021 JRNL REFN ESSN 1091-6490 JRNL PMID 33836580 JRNL DOI 10.1073/PNAS.2016705118 REMARK 2 REMARK 2 RESOLUTION. 1.77 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0257 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.77 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 52.49 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 32049 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.209 REMARK 3 R VALUE (WORKING SET) : 0.208 REMARK 3 FREE R VALUE : 0.234 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1697 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.77 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.82 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2344 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.50 REMARK 3 BIN R VALUE (WORKING SET) : 0.3920 REMARK 3 BIN FREE R VALUE SET COUNT : 114 REMARK 3 BIN FREE R VALUE : 0.3680 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2832 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 12 REMARK 3 SOLVENT ATOMS : 160 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 19.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 33.02 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.45000 REMARK 3 B22 (A**2) : 2.69000 REMARK 3 B33 (A**2) : -4.27000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 1.68000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.148 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.130 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.132 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 9.472 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.964 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.950 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2954 ; 0.008 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 2731 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4004 ; 1.502 ; 1.643 REMARK 3 BOND ANGLES OTHERS (DEGREES): 6254 ; 1.335 ; 1.583 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 375 ; 5.836 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 191 ;24.930 ;19.110 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 484 ;14.633 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 42 ;17.370 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 390 ; 0.066 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3425 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 753 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 1 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 10 188 B 10 188 5656 0.100 0.050 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 10 A 25 REMARK 3 ORIGIN FOR THE GROUP (A): -5.8403 -19.3771 58.4585 REMARK 3 T TENSOR REMARK 3 T11: 0.2480 T22: 0.3689 REMARK 3 T33: 0.2021 T12: 0.0076 REMARK 3 T13: 0.0015 T23: 0.0260 REMARK 3 L TENSOR REMARK 3 L11: 3.1060 L22: 6.7016 REMARK 3 L33: 6.8975 L12: 4.0792 REMARK 3 L13: 2.7501 L23: 1.9263 REMARK 3 S TENSOR REMARK 3 S11: 0.2531 S12: -0.6106 S13: 0.1978 REMARK 3 S21: 0.3355 S22: -0.5065 S23: 0.3199 REMARK 3 S31: 0.5965 S32: -0.2737 S33: 0.2534 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 26 A 131 REMARK 3 ORIGIN FOR THE GROUP (A): -3.3293 -9.9213 46.2359 REMARK 3 T TENSOR REMARK 3 T11: 0.0628 T22: 0.0076 REMARK 3 T33: 0.1958 T12: -0.0012 REMARK 3 T13: -0.0484 T23: -0.0035 REMARK 3 L TENSOR REMARK 3 L11: 2.0836 L22: 2.7224 REMARK 3 L33: 4.2412 L12: 0.5584 REMARK 3 L13: -1.0871 L23: -1.5825 REMARK 3 S TENSOR REMARK 3 S11: -0.0091 S12: -0.0634 S13: 0.0128 REMARK 3 S21: -0.0960 S22: -0.1293 S23: 0.0490 REMARK 3 S31: 0.3841 S32: 0.0438 S33: 0.1384 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 132 A 145 REMARK 3 ORIGIN FOR THE GROUP (A): 3.9253 -6.7100 33.1478 REMARK 3 T TENSOR REMARK 3 T11: 0.0945 T22: 0.0863 REMARK 3 T33: 0.1418 T12: 0.0702 REMARK 3 T13: -0.0114 T23: 0.0411 REMARK 3 L TENSOR REMARK 3 L11: 6.3421 L22: 1.8716 REMARK 3 L33: 6.7679 L12: 1.2390 REMARK 3 L13: 1.9424 L23: 0.1762 REMARK 3 S TENSOR REMARK 3 S11: -0.0789 S12: 0.0294 S13: -0.1182 REMARK 3 S21: -0.1059 S22: -0.0766 S23: 0.1276 REMARK 3 S31: 0.4520 S32: 0.2767 S33: 0.1555 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 146 A 189 REMARK 3 ORIGIN FOR THE GROUP (A): 6.5815 -0.5732 25.3311 REMARK 3 T TENSOR REMARK 3 T11: 0.0978 T22: 0.0829 REMARK 3 T33: 0.1922 T12: 0.0677 REMARK 3 T13: -0.0430 T23: 0.0427 REMARK 3 L TENSOR REMARK 3 L11: 1.7897 L22: 2.1459 REMARK 3 L33: 8.5959 L12: 0.7123 REMARK 3 L13: -3.2931 L23: 0.6558 REMARK 3 S TENSOR REMARK 3 S11: -0.0330 S12: -0.0763 S13: -0.0209 REMARK 3 S21: -0.1262 S22: -0.0564 S23: -0.0627 REMARK 3 S31: 0.0982 S32: 0.3015 S33: 0.0894 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 10 B 25 REMARK 3 ORIGIN FOR THE GROUP (A): 15.5551 21.0519 -24.0647 REMARK 3 T TENSOR REMARK 3 T11: 1.1343 T22: 0.4678 REMARK 3 T33: 0.2674 T12: -0.0468 REMARK 3 T13: 0.1545 T23: 0.0461 REMARK 3 L TENSOR REMARK 3 L11: 10.8716 L22: 0.7541 REMARK 3 L33: 0.3243 L12: -1.1484 REMARK 3 L13: -1.4746 L23: 0.3975 REMARK 3 S TENSOR REMARK 3 S11: -0.1171 S12: 0.8766 S13: 0.0049 REMARK 3 S21: -0.7419 S22: 0.1439 S23: -0.1439 REMARK 3 S31: -0.3559 S32: -0.1057 S33: -0.0267 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 26 B 76 REMARK 3 ORIGIN FOR THE GROUP (A): 16.2193 15.1358 -17.9497 REMARK 3 T TENSOR REMARK 3 T11: 0.7072 T22: 0.0696 REMARK 3 T33: 0.2023 T12: 0.0754 REMARK 3 T13: 0.0912 T23: 0.0777 REMARK 3 L TENSOR REMARK 3 L11: 3.8529 L22: 4.9474 REMARK 3 L33: 4.8299 L12: -1.3782 REMARK 3 L13: 0.1638 L23: 2.0475 REMARK 3 S TENSOR REMARK 3 S11: 0.4543 S12: 0.3839 S13: 0.2624 REMARK 3 S21: -0.7071 S22: -0.1408 S23: -0.2607 REMARK 3 S31: -1.6364 S32: -0.1758 S33: -0.3135 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 77 B 133 REMARK 3 ORIGIN FOR THE GROUP (A): 12.3531 9.4070 -5.4060 REMARK 3 T TENSOR REMARK 3 T11: 0.2260 T22: 0.0472 REMARK 3 T33: 0.2052 T12: 0.0308 REMARK 3 T13: -0.0323 T23: 0.0177 REMARK 3 L TENSOR REMARK 3 L11: 1.9503 L22: 2.6552 REMARK 3 L33: 6.9040 L12: -0.7175 REMARK 3 L13: -2.0233 L23: 0.4144 REMARK 3 S TENSOR REMARK 3 S11: 0.2116 S12: -0.0293 S13: 0.0687 REMARK 3 S21: -0.2038 S22: -0.0508 S23: -0.1069 REMARK 3 S31: -0.9831 S32: -0.2169 S33: -0.1608 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 134 B 190 REMARK 3 ORIGIN FOR THE GROUP (A): 10.0843 6.5495 10.2202 REMARK 3 T TENSOR REMARK 3 T11: 0.0722 T22: 0.0569 REMARK 3 T33: 0.1963 T12: 0.0286 REMARK 3 T13: -0.0534 T23: 0.0247 REMARK 3 L TENSOR REMARK 3 L11: 2.0263 L22: 1.8441 REMARK 3 L33: 8.8921 L12: -0.2773 REMARK 3 L13: -2.1891 L23: 0.5404 REMARK 3 S TENSOR REMARK 3 S11: -0.0150 S12: 0.0365 S13: 0.0192 REMARK 3 S21: -0.0237 S22: 0.0618 S23: -0.0159 REMARK 3 S31: -0.3839 S32: 0.0238 S33: -0.0469 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 6ZT4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 17-JUL-20. REMARK 100 THE DEPOSITION ID IS D_1292110150. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-DEC-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DIALS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.4 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 33772 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.770 REMARK 200 RESOLUTION RANGE LOW (A) : 66.280 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 6.300 REMARK 200 R MERGE (I) : 0.09700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.77 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.81 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.1 REMARK 200 DATA REDUNDANCY IN SHELL : 4.40 REMARK 200 R MERGE FOR SHELL (I) : 1.51700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.8.2 REMARK 200 STARTING MODEL: 2BM4 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.07 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL, PH 4.6, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 42.86550 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2340 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16300 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -6.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 ARG A 2 REMARK 465 ILE A 3 REMARK 465 GLY A 4 REMARK 465 ALA A 5 REMARK 465 ASN A 6 REMARK 465 GLY A 7 REMARK 465 ASP A 8 REMARK 465 GLU A 9 REMARK 465 GLY A 190 REMARK 465 GLY A 191 REMARK 465 SER B 0 REMARK 465 MET B 1 REMARK 465 ARG B 2 REMARK 465 ILE B 3 REMARK 465 GLY B 4 REMARK 465 ALA B 5 REMARK 465 ASN B 6 REMARK 465 GLY B 7 REMARK 465 ASP B 8 REMARK 465 GLU B 9 REMARK 465 GLY B 191 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG B 20 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 78 118.74 -39.97 REMARK 500 LEU A 99 15.00 58.05 REMARK 500 LYS A 129 10.02 59.35 REMARK 500 LEU B 99 13.10 58.59 REMARK 500 LYS B 129 12.28 59.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 200 DBREF 6ZT4 A 1 191 UNP A0QSY0 MFPA_MYCS2 1 191 DBREF 6ZT4 B 1 191 UNP A0QSY0 MFPA_MYCS2 1 191 SEQADV 6ZT4 SER A 0 UNP A0QSY0 EXPRESSION TAG SEQADV 6ZT4 SER B 0 UNP A0QSY0 EXPRESSION TAG SEQRES 1 A 192 SER MET ARG ILE GLY ALA ASN GLY ASP GLU THR VAL TRP SEQRES 2 A 192 ALA ASP GLU GLU PHE ALA GLY ARG ASP PHE ARG ASP GLU SEQRES 3 A 192 ASP LEU SER ARG ILE ARG THR GLU ARG VAL VAL PHE THR SEQRES 4 A 192 GLU CYS ASP PHE SER GLY VAL ASP LEU SER GLU SER GLU SEQRES 5 A 192 HIS HIS GLY SER ALA PHE ARG ASN CYS THR PHE ARG ARG SEQRES 6 A 192 SER THR ILE TRP HIS SER THR PHE THR ASN CYS SER LEU SEQRES 7 A 192 LEU GLY SER VAL PHE THR GLU CYS ARG ILE ARG PRO VAL SEQRES 8 A 192 THR PHE VAL GLU CYS ASP PHE THR LEU ALA VAL LEU GLY SEQRES 9 A 192 GLY CYS ASP LEU ARG ALA VAL ASP LEU SER ASP CYS ARG SEQRES 10 A 192 LEU ARG GLU VAL SER LEU VAL GLY ALA ASP LEU ARG LYS SEQRES 11 A 192 ALA VAL LEU ARG ARG ALA ASP LEU THR GLY SER ARG VAL SEQRES 12 A 192 GLN ASP ALA ARG LEU GLU GLU ALA ASP LEU ARG GLY THR SEQRES 13 A 192 ARG VAL ASP PRO THR PHE TRP THR THR ALA LYS VAL ARG SEQRES 14 A 192 GLY ALA LYS ILE ASP ILE GLU GLN ALA LEU ALA TYR ALA SEQRES 15 A 192 ALA ALA HIS GLY LEU ALA VAL HIS GLY GLY SEQRES 1 B 192 SER MET ARG ILE GLY ALA ASN GLY ASP GLU THR VAL TRP SEQRES 2 B 192 ALA ASP GLU GLU PHE ALA GLY ARG ASP PHE ARG ASP GLU SEQRES 3 B 192 ASP LEU SER ARG ILE ARG THR GLU ARG VAL VAL PHE THR SEQRES 4 B 192 GLU CYS ASP PHE SER GLY VAL ASP LEU SER GLU SER GLU SEQRES 5 B 192 HIS HIS GLY SER ALA PHE ARG ASN CYS THR PHE ARG ARG SEQRES 6 B 192 SER THR ILE TRP HIS SER THR PHE THR ASN CYS SER LEU SEQRES 7 B 192 LEU GLY SER VAL PHE THR GLU CYS ARG ILE ARG PRO VAL SEQRES 8 B 192 THR PHE VAL GLU CYS ASP PHE THR LEU ALA VAL LEU GLY SEQRES 9 B 192 GLY CYS ASP LEU ARG ALA VAL ASP LEU SER ASP CYS ARG SEQRES 10 B 192 LEU ARG GLU VAL SER LEU VAL GLY ALA ASP LEU ARG LYS SEQRES 11 B 192 ALA VAL LEU ARG ARG ALA ASP LEU THR GLY SER ARG VAL SEQRES 12 B 192 GLN ASP ALA ARG LEU GLU GLU ALA ASP LEU ARG GLY THR SEQRES 13 B 192 ARG VAL ASP PRO THR PHE TRP THR THR ALA LYS VAL ARG SEQRES 14 B 192 GLY ALA LYS ILE ASP ILE GLU GLN ALA LEU ALA TYR ALA SEQRES 15 B 192 ALA ALA HIS GLY LEU ALA VAL HIS GLY GLY HET EDO A 201 4 HET EDO A 202 4 HET EDO B 200 4 HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 3 EDO 3(C2 H6 O2) FORMUL 6 HOH *160(H2 O) HELIX 1 AA1 THR A 160 ALA A 165 1 6 HELIX 2 AA2 ASP A 173 HIS A 184 1 12 HELIX 3 AA3 THR B 160 ALA B 165 1 6 HELIX 4 AA4 ASP B 173 HIS B 184 1 12 SHEET 1 AA1 5 VAL A 11 ALA A 13 0 SHEET 2 AA1 5 ARG A 31 GLU A 33 1 O ARG A 31 N TRP A 12 SHEET 3 AA1 5 GLU A 51 HIS A 53 1 O GLU A 51 N THR A 32 SHEET 4 AA1 5 THR A 71 THR A 73 1 O THR A 73 N HIS A 52 SHEET 5 AA1 5 THR A 91 VAL A 93 1 O VAL A 93 N PHE A 72 SHEET 1 AA2 3 GLU A 16 ALA A 18 0 SHEET 2 AA2 3 VAL A 36 THR A 38 1 O VAL A 36 N PHE A 17 SHEET 3 AA2 3 ALA A 56 ARG A 58 1 O ALA A 56 N PHE A 37 SHEET 1 AA3 2 LYS A 171 ILE A 172 0 SHEET 2 AA3 2 ALA B 187 VAL B 188 1 O ALA B 187 N ILE A 172 SHEET 1 AA4 2 ALA A 187 VAL A 188 0 SHEET 2 AA4 2 LYS B 171 ILE B 172 1 O ILE B 172 N ALA A 187 SHEET 1 AA5 3 VAL B 11 ALA B 18 0 SHEET 2 AA5 3 ARG B 31 THR B 38 1 O VAL B 36 N PHE B 17 SHEET 3 AA5 3 ALA B 56 ARG B 58 1 O ALA B 56 N PHE B 37 SHEET 1 AA6 5 VAL B 11 ALA B 18 0 SHEET 2 AA6 5 ARG B 31 THR B 38 1 O VAL B 36 N PHE B 17 SHEET 3 AA6 5 GLU B 51 HIS B 53 1 O HIS B 53 N ARG B 34 SHEET 4 AA6 5 THR B 71 THR B 73 1 O THR B 73 N HIS B 52 SHEET 5 AA6 5 THR B 91 VAL B 93 1 O VAL B 93 N PHE B 72 CISPEP 1 ARG A 88 PRO A 89 0 -5.91 CISPEP 2 ARG B 88 PRO B 89 0 -0.10 SITE 1 AC1 5 VAL A 93 ASP A 114 HOH A 309 TRP B 68 SITE 2 AC1 5 ARG B 86 SITE 1 AC2 6 ALA A 165 LYS A 166 VAL A 167 ARG A 168 SITE 2 AC2 6 HOH A 313 HOH A 315 SITE 1 AC3 6 THR B 155 VAL B 157 GLU B 175 GLN B 176 SITE 2 AC3 6 HOH B 311 HOH B 313 CRYST1 31.006 85.731 66.336 90.00 92.40 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.032252 0.000000 0.001355 0.00000 SCALE2 0.000000 0.011664 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015088 0.00000