HEADER CHAPERONE 22-JUL-20 6ZUF TITLE UREA-BASED FOLDAMER INHIBITOR CHIMERA C2 IN COMPLEX WITH ASF1 HISTONE TITLE 2 CHAPERONE COMPND MOL_ID: 1; COMPND 2 MOLECULE: HISTONE CHAPERONE ASF1A; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: ANTI-SILENCING FUNCTION PROTEIN 1 HOMOLOG A,HASF1A,CCG1- COMPND 5 INTERACTING FACTOR A,HCIA; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: C2 FOLDAMER/PEPTIDE HYBRID INHIBITOR OF HISTONE CHAPERONE COMPND 9 ASF1; COMPND 10 CHAIN: C, D; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ASF1A, CGI-98, HSPC146; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VARIANT: GOLD; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PETM30; SOURCE 11 MOL_ID: 2; SOURCE 12 SYNTHETIC: YES; SOURCE 13 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 14 ORGANISM_TAXID: 9606 KEYWDS HISTONE CHAPERONE RATIONAL DESIGN PEPTIDOMIMETICS FOLDAMERS, KEYWDS 2 CHAPERONE EXPDTA X-RAY DIFFRACTION AUTHOR M.BAKAIL,J.MBIANDA,E.M.PERRIN,R.GUEROIS,P.LEGRAND,S.TRAORE,C.DOUAT, AUTHOR 2 G.GUICHARD,F.OCHSENBEIN REVDAT 4 10-JUL-24 6ZUF 1 COMPND FORMUL LINK REVDAT 3 31-JAN-24 6ZUF 1 REMARK REVDAT 2 15-NOV-23 6ZUF 1 LINK ATOM REVDAT 1 09-JUN-21 6ZUF 0 JRNL AUTH J.MBIANDA,M.BAKAIL,C.ANDRE,G.MOAL,M.E.PERRIN,G.PINNA, JRNL AUTH 2 R.GUEROIS,F.BECHER,P.LEGRAND,S.TRAORE,C.DOUAT,G.GUICHARD, JRNL AUTH 3 F.OCHSENBEIN JRNL TITL OPTIMAL ANCHORING OF A FOLDAMER INHIBITOR OF ASF1 HISTONE JRNL TITL 2 CHAPERONE THROUGH BACKBONE PLASTICITY. JRNL REF SCI ADV V. 7 2021 JRNL REFN ESSN 2375-2548 JRNL PMID 33741589 JRNL DOI 10.1126/SCIADV.ABD9153 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.10.3 (3-OCT-2019) REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 96.5 REMARK 3 NUMBER OF REFLECTIONS : 31049 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.186 REMARK 3 R VALUE (WORKING SET) : 0.185 REMARK 3 FREE R VALUE : 0.210 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 1553 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.00 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 64.21 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : NULL REMARK 3 BIN R VALUE (WORKING + TEST SET) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2501 REMARK 3 BIN FREE R VALUE : 0.2332 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : 31 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2658 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 74 REMARK 3 SOLVENT ATOMS : 181 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 35.61 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -9.41280 REMARK 3 B22 (A**2) : 1.41600 REMARK 3 B33 (A**2) : 7.99690 REMARK 3 B12 (A**2) : 5.62770 REMARK 3 B13 (A**2) : 0.28750 REMARK 3 B23 (A**2) : 0.57620 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.230 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.130 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.116 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.131 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.117 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.941 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.932 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 2812 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 3817 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1002 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES : 484 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 2812 ; 10.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 350 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 2411 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.008 REMARK 3 BOND ANGLES (DEGREES) : 1.01 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.92 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 15.82 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: {A|* C|*} REMARK 3 ORIGIN FOR THE GROUP (A): 0.2124 -1.1734 -1.0955 REMARK 3 T TENSOR REMARK 3 T11: -0.0057 T22: -0.0456 REMARK 3 T33: -0.0653 T12: -0.0136 REMARK 3 T13: 0.0034 T23: 0.0027 REMARK 3 L TENSOR REMARK 3 L11: 0.7713 L22: 0.6798 REMARK 3 L33: 3.0001 L12: 0.4335 REMARK 3 L13: 1.0178 L23: 0.9563 REMARK 3 S TENSOR REMARK 3 S11: -0.0217 S12: -0.0132 S13: 0.0321 REMARK 3 S21: -0.0132 S22: -0.055 S23: -0.1386 REMARK 3 S31: 0.0321 S32: -0.1386 S33: 0.0767 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: {B|* D|*} REMARK 3 ORIGIN FOR THE GROUP (A): -20.1532 22.1807 1.9423 REMARK 3 T TENSOR REMARK 3 T11: 0.0024 T22: -0.0288 REMARK 3 T33: -0.0493 T12: -0.018 REMARK 3 T13: -0.019 T23: 0.0119 REMARK 3 L TENSOR REMARK 3 L11: 0.3846 L22: 0.7049 REMARK 3 L33: 2.2336 L12: -0.0471 REMARK 3 L13: -0.0845 L23: -0.7059 REMARK 3 S TENSOR REMARK 3 S11: -0.0048 S12: -0.0502 S13: 0.0676 REMARK 3 S21: -0.0502 S22: -0 S23: -0.0429 REMARK 3 S31: 0.0676 S32: -0.0429 S33: 0.0048 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6ZUF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 23-JUL-20. REMARK 100 THE DEPOSITION ID IS D_1292109544. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-JUL-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SOLEIL REMARK 200 BEAMLINE : PROXIMA 1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97857 REMARK 200 MONOCHROMATOR : 0.97857 REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 31049 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.798 REMARK 200 RESOLUTION RANGE LOW (A) : 48.291 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.1 REMARK 200 DATA REDUNDANCY : 3.900 REMARK 200 R MERGE (I) : 0.08400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.91 REMARK 200 COMPLETENESS FOR SHELL (%) : 70.5 REMARK 200 DATA REDUNDANCY IN SHELL : 2.60 REMARK 200 R MERGE FOR SHELL (I) : 0.66000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.140 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 2I32 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.16 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.47 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM SODIUM CITRATE PH4.2, 300 MM REMARK 280 LISO4, 26% PEG3350, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2230 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8660 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -32.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2850 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8710 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -31.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 ALA A 0 REMARK 465 MET A 1 REMARK 465 ASP A 155 REMARK 465 ASN A 156 REMARK 465 GLY B -1 REMARK 465 ALA B 0 REMARK 465 ASP B 155 REMARK 465 ASN B 156 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 QQB C 3 CA - C - N ANGL. DEV. = 23.7 DEGREES REMARK 500 OUR C 4 CA - C - N ANGL. DEV. = 19.8 DEGREES REMARK 500 URL C 5 CA - C - N ANGL. DEV. = 20.6 DEGREES REMARK 500 QQ8 C 6 CA - C - N ANGL. DEV. = 16.0 DEGREES REMARK 500 QQB D 3 CA - C - N ANGL. DEV. = 25.5 DEGREES REMARK 500 OUR D 4 CA - C - N ANGL. DEV. = 19.0 DEGREES REMARK 500 URL D 5 CA - C - N ANGL. DEV. = 21.7 DEGREES REMARK 500 QQ8 D 6 CA - C - N ANGL. DEV. = 15.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 QQB C 3 1.08 -55.54 REMARK 500 QQ8 C 6 31.07 -79.39 REMARK 500 QQ8 D 6 32.55 -80.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 QQB C 3 OUR C 4 131.42 REMARK 500 OUR C 4 URL C 5 138.92 REMARK 500 URL C 5 QQ8 C 6 126.74 REMARK 500 QQ8 C 6 ARG C 7 147.45 REMARK 500 QQB D 3 OUR D 4 131.43 REMARK 500 OUR D 4 URL D 5 138.94 REMARK 500 URL D 5 QQ8 D 6 125.21 REMARK 500 QQ8 D 6 ARG D 7 145.92 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 QQB C 3 -26.14 REMARK 500 OUR C 4 -21.27 REMARK 500 URL C 5 -28.83 REMARK 500 QQ8 C 6 -16.88 REMARK 500 QQB D 3 -25.94 REMARK 500 OUR D 4 -21.57 REMARK 500 URL D 5 -30.07 REMARK 500 QQ8 D 6 -17.16 REMARK 500 REMARK 500 REMARK: NULL DBREF 6ZUF A 1 156 UNP Q9Y294 ASF1A_HUMAN 1 156 DBREF 6ZUF B 1 156 UNP Q9Y294 ASF1A_HUMAN 1 156 DBREF 6ZUF C 1 9 PDB 6ZUF 6ZUF 1 9 DBREF 6ZUF D 1 9 PDB 6ZUF 6ZUF 1 9 SEQADV 6ZUF GLY A -1 UNP Q9Y294 EXPRESSION TAG SEQADV 6ZUF ALA A 0 UNP Q9Y294 EXPRESSION TAG SEQADV 6ZUF GLY B -1 UNP Q9Y294 EXPRESSION TAG SEQADV 6ZUF ALA B 0 UNP Q9Y294 EXPRESSION TAG SEQRES 1 A 158 GLY ALA MET ALA LYS VAL GLN VAL ASN ASN VAL VAL VAL SEQRES 2 A 158 LEU ASP ASN PRO SER PRO PHE TYR ASN PRO PHE GLN PHE SEQRES 3 A 158 GLU ILE THR PHE GLU CYS ILE GLU ASP LEU SER GLU ASP SEQRES 4 A 158 LEU GLU TRP LYS ILE ILE TYR VAL GLY SER ALA GLU SER SEQRES 5 A 158 GLU GLU TYR ASP GLN VAL LEU ASP SER VAL LEU VAL GLY SEQRES 6 A 158 PRO VAL PRO ALA GLY ARG HIS MET PHE VAL PHE GLN ALA SEQRES 7 A 158 ASP ALA PRO ASN PRO GLY LEU ILE PRO ASP ALA ASP ALA SEQRES 8 A 158 VAL GLY VAL THR VAL VAL LEU ILE THR CYS THR TYR ARG SEQRES 9 A 158 GLY GLN GLU PHE ILE ARG VAL GLY TYR TYR VAL ASN ASN SEQRES 10 A 158 GLU TYR THR GLU THR GLU LEU ARG GLU ASN PRO PRO VAL SEQRES 11 A 158 LYS PRO ASP PHE SER LYS LEU GLN ARG ASN ILE LEU ALA SEQRES 12 A 158 SER ASN PRO ARG VAL THR ARG PHE HIS ILE ASN TRP GLU SEQRES 13 A 158 ASP ASN SEQRES 1 B 158 GLY ALA MET ALA LYS VAL GLN VAL ASN ASN VAL VAL VAL SEQRES 2 B 158 LEU ASP ASN PRO SER PRO PHE TYR ASN PRO PHE GLN PHE SEQRES 3 B 158 GLU ILE THR PHE GLU CYS ILE GLU ASP LEU SER GLU ASP SEQRES 4 B 158 LEU GLU TRP LYS ILE ILE TYR VAL GLY SER ALA GLU SER SEQRES 5 B 158 GLU GLU TYR ASP GLN VAL LEU ASP SER VAL LEU VAL GLY SEQRES 6 B 158 PRO VAL PRO ALA GLY ARG HIS MET PHE VAL PHE GLN ALA SEQRES 7 B 158 ASP ALA PRO ASN PRO GLY LEU ILE PRO ASP ALA ASP ALA SEQRES 8 B 158 VAL GLY VAL THR VAL VAL LEU ILE THR CYS THR TYR ARG SEQRES 9 B 158 GLY GLN GLU PHE ILE ARG VAL GLY TYR TYR VAL ASN ASN SEQRES 10 B 158 GLU TYR THR GLU THR GLU LEU ARG GLU ASN PRO PRO VAL SEQRES 11 B 158 LYS PRO ASP PHE SER LYS LEU GLN ARG ASN ILE LEU ALA SEQRES 12 B 158 SER ASN PRO ARG VAL THR ARG PHE HIS ILE ASN TRP GLU SEQRES 13 B 158 ASP ASN SEQRES 1 C 9 GLU LYS QQB OUR URL QQ8 ARG ILE ALA SEQRES 1 D 9 GLU LYS QQB OUR URL QQ8 ARG ILE ALA HET QQB C 3 17 HET OUR C 4 13 HET URL C 5 10 HET QQ8 C 6 11 HET QQB D 3 17 HET OUR D 4 13 HET URL D 5 10 HET QQ8 D 6 11 HET GOL A 201 6 HET GOL A 202 6 HET SO4 A 203 5 HET SO4 A 204 5 HET GOL B 201 6 HET GOL B 202 6 HET GOL B 203 6 HET GOL B 204 6 HET GOL B 205 6 HET SO4 B 206 5 HET GOL C 101 6 HET GOL D 101 6 HET SO4 D 102 5 HETNAM QQB ~{N}-[(2~{S})-2-AZANYL-3-NAPHTHALEN-1-YL- HETNAM 2 QQB PROPYL]METHANAMIDE HETNAM OUR [AZANYL-[[(4~{S})-4-AZANYL-5-(CARBOXYAMINO) HETNAM 2 OUR PENTYL]AMINO]METHYLIDENE]AZANIUM HETNAM URL [(2~{S})-2-AZANYL-4-METHYL-PENTYL]CARBAMIC ACID HETNAM QQ8 (4~{S})-4-AZANYL-5-FORMAMIDO-PENTANAMIDE HETNAM GOL GLYCEROL HETNAM SO4 SULFATE ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 QQB 2(C14 H16 N2 O2) FORMUL 3 OUR 2(C7 H18 N5 O2 1+) FORMUL 3 URL 2(C7 H16 N2 O2) FORMUL 3 QQ8 2(C6 H13 N3 O3) FORMUL 5 GOL 9(C3 H8 O3) FORMUL 7 SO4 4(O4 S 2-) FORMUL 18 HOH *181(H2 O) HELIX 1 AA1 SER A 50 GLU A 52 5 3 HELIX 2 AA2 ASN A 80 ILE A 84 5 5 HELIX 3 AA3 PRO A 85 VAL A 90 1 6 HELIX 4 AA4 GLU A 119 ASN A 125 1 7 HELIX 5 AA5 ASP A 131 SER A 133 5 3 HELIX 6 AA6 SER B 50 GLU B 52 5 3 HELIX 7 AA7 ASN B 80 ILE B 84 5 5 HELIX 8 AA8 PRO B 85 VAL B 90 1 6 HELIX 9 AA9 GLU B 119 ASN B 125 1 7 HELIX 10 AB1 ASP B 131 SER B 133 5 3 SHEET 1 AA1 3 VAL A 4 LEU A 12 0 SHEET 2 AA1 3 PHE A 22 CYS A 30 -1 O GLU A 29 N GLN A 5 SHEET 3 AA1 3 GLY A 68 ALA A 76 -1 O PHE A 74 N PHE A 24 SHEET 1 AA2 6 SER A 16 PRO A 17 0 SHEET 2 AA2 6 LEU A 135 ILE A 139 -1 O ARG A 137 N SER A 16 SHEET 3 AA2 6 GLN A 104 TYR A 117 -1 N GLU A 116 O GLN A 136 SHEET 4 AA2 6 GLY A 91 TYR A 101 -1 N ILE A 97 O VAL A 109 SHEET 5 AA2 6 LEU A 38 VAL A 45 -1 N ILE A 43 O LEU A 96 SHEET 6 AA2 6 ASP A 54 VAL A 62 -1 O GLN A 55 N TYR A 44 SHEET 1 AA3 4 SER A 16 PRO A 17 0 SHEET 2 AA3 4 LEU A 135 ILE A 139 -1 O ARG A 137 N SER A 16 SHEET 3 AA3 4 GLN A 104 TYR A 117 -1 N GLU A 116 O GLN A 136 SHEET 4 AA3 4 ARG A 145 ARG A 148 -1 O THR A 147 N ARG A 108 SHEET 1 AA4 3 VAL B 4 LEU B 12 0 SHEET 2 AA4 3 PHE B 22 CYS B 30 -1 O GLU B 25 N VAL B 10 SHEET 3 AA4 3 GLY B 68 ALA B 76 -1 O HIS B 70 N PHE B 28 SHEET 1 AA5 6 SER B 16 PRO B 17 0 SHEET 2 AA5 6 LEU B 135 ILE B 139 -1 O ARG B 137 N SER B 16 SHEET 3 AA5 6 GLN B 104 TYR B 117 -1 N ASN B 114 O ASN B 138 SHEET 4 AA5 6 GLY B 91 TYR B 101 -1 N ILE B 97 O VAL B 109 SHEET 5 AA5 6 LEU B 38 VAL B 45 -1 N ILE B 43 O LEU B 96 SHEET 6 AA5 6 ASP B 54 VAL B 62 -1 O VAL B 62 N LEU B 38 SHEET 1 AA6 4 SER B 16 PRO B 17 0 SHEET 2 AA6 4 LEU B 135 ILE B 139 -1 O ARG B 137 N SER B 16 SHEET 3 AA6 4 GLN B 104 TYR B 117 -1 N ASN B 114 O ASN B 138 SHEET 4 AA6 4 ARG B 145 ARG B 148 -1 O THR B 147 N ARG B 108 LINK C LYS C 2 N QQB C 3 1555 1555 1.33 LINK C QQB C 3 N OUR C 4 1555 1555 1.33 LINK C OUR C 4 N URL C 5 1555 1555 1.34 LINK C URL C 5 N QQ8 C 6 1555 1555 1.34 LINK C QQ8 C 6 N ARG C 7 1555 1555 1.35 LINK C LYS D 2 N QQB D 3 1555 1555 1.34 LINK C QQB D 3 N OUR D 4 1555 1555 1.33 LINK C OUR D 4 N URL D 5 1555 1555 1.34 LINK C URL D 5 N QQ8 D 6 1555 1555 1.34 LINK C QQ8 D 6 N ARG D 7 1555 1555 1.34 CISPEP 1 ASN A 14 PRO A 15 0 -4.72 CISPEP 2 GLY A 63 PRO A 64 0 -8.87 CISPEP 3 ASN B 14 PRO B 15 0 -1.29 CISPEP 4 GLY B 63 PRO B 64 0 -9.52 CRYST1 36.730 51.280 56.080 112.38 104.87 101.19 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.027226 0.005386 0.010859 0.00000 SCALE2 0.000000 0.019879 0.010132 0.00000 SCALE3 0.000000 0.000000 0.020708 0.00000 CONECT 2506 2519 CONECT 2513 2518 2520 CONECT 2514 2515 CONECT 2515 2514 2516 2530 CONECT 2516 2515 2517 CONECT 2517 2516 2518 CONECT 2518 2513 2517 2519 CONECT 2519 2506 2518 CONECT 2520 2513 2521 2529 CONECT 2521 2520 2522 2526 CONECT 2522 2521 2523 CONECT 2523 2522 2524 CONECT 2524 2523 2525 CONECT 2525 2524 2526 CONECT 2526 2521 2525 2527 CONECT 2527 2526 2528 CONECT 2528 2527 2529 CONECT 2529 2520 2528 CONECT 2530 2515 2531 CONECT 2531 2530 2534 2541 CONECT 2532 2533 2542 2548 CONECT 2533 2532 CONECT 2534 2531 2535 CONECT 2535 2534 2536 CONECT 2536 2535 2537 CONECT 2537 2536 2538 CONECT 2538 2537 2539 2540 CONECT 2539 2538 CONECT 2540 2538 CONECT 2541 2531 2542 CONECT 2542 2532 2541 CONECT 2543 2546 2547 2548 CONECT 2544 2545 2549 2558 CONECT 2545 2544 CONECT 2546 2543 2550 CONECT 2547 2543 2549 CONECT 2548 2532 2543 CONECT 2549 2544 2547 CONECT 2550 2546 2551 2552 CONECT 2551 2550 CONECT 2552 2550 CONECT 2553 2554 CONECT 2554 2553 2555 2564 CONECT 2555 2554 2556 CONECT 2556 2555 2557 CONECT 2557 2556 2558 2559 CONECT 2558 2544 2557 CONECT 2559 2557 2560 CONECT 2560 2559 2561 CONECT 2561 2560 2562 2563 CONECT 2562 2561 CONECT 2563 2561 CONECT 2564 2554 CONECT 2600 2613 CONECT 2607 2612 2614 CONECT 2608 2609 CONECT 2609 2608 2610 2624 CONECT 2610 2609 2611 CONECT 2611 2610 2612 CONECT 2612 2607 2611 2613 CONECT 2613 2600 2612 CONECT 2614 2607 2615 2623 CONECT 2615 2614 2616 2620 CONECT 2616 2615 2617 CONECT 2617 2616 2618 CONECT 2618 2617 2619 CONECT 2619 2618 2620 CONECT 2620 2615 2619 2621 CONECT 2621 2620 2622 CONECT 2622 2621 2623 CONECT 2623 2614 2622 CONECT 2624 2609 2625 CONECT 2625 2624 2628 2635 CONECT 2626 2627 2636 2642 CONECT 2627 2626 CONECT 2628 2625 2629 CONECT 2629 2628 2630 CONECT 2630 2629 2631 CONECT 2631 2630 2632 CONECT 2632 2631 2633 2634 CONECT 2633 2632 CONECT 2634 2632 CONECT 2635 2625 2636 CONECT 2636 2626 2635 CONECT 2637 2640 2641 2642 CONECT 2638 2639 2643 2652 CONECT 2639 2638 CONECT 2640 2637 2644 CONECT 2641 2637 2643 CONECT 2642 2626 2637 CONECT 2643 2638 2641 CONECT 2644 2640 2645 2646 CONECT 2645 2644 CONECT 2646 2644 CONECT 2647 2648 CONECT 2648 2647 2649 2658 CONECT 2649 2648 2650 CONECT 2650 2649 2651 CONECT 2651 2650 2652 2653 CONECT 2652 2638 2651 CONECT 2653 2651 2654 CONECT 2654 2653 2655 CONECT 2655 2654 2656 2657 CONECT 2656 2655 CONECT 2657 2655 CONECT 2658 2648 CONECT 2683 2684 2685 CONECT 2684 2683 CONECT 2685 2683 2686 2687 CONECT 2686 2685 CONECT 2687 2685 2688 CONECT 2688 2687 CONECT 2689 2690 2691 CONECT 2690 2689 CONECT 2691 2689 2692 2693 CONECT 2692 2691 CONECT 2693 2691 2694 CONECT 2694 2693 CONECT 2695 2696 2697 2698 2699 CONECT 2696 2695 CONECT 2697 2695 CONECT 2698 2695 CONECT 2699 2695 CONECT 2700 2701 2702 2703 2704 CONECT 2701 2700 CONECT 2702 2700 CONECT 2703 2700 CONECT 2704 2700 CONECT 2705 2706 2707 CONECT 2706 2705 CONECT 2707 2705 2708 2709 CONECT 2708 2707 CONECT 2709 2707 2710 CONECT 2710 2709 CONECT 2711 2712 2713 CONECT 2712 2711 CONECT 2713 2711 2714 2715 CONECT 2714 2713 CONECT 2715 2713 2716 CONECT 2716 2715 CONECT 2717 2718 2719 CONECT 2718 2717 CONECT 2719 2717 2720 2721 CONECT 2720 2719 CONECT 2721 2719 2722 CONECT 2722 2721 CONECT 2723 2724 2725 CONECT 2724 2723 CONECT 2725 2723 2726 2727 CONECT 2726 2725 CONECT 2727 2725 2728 CONECT 2728 2727 CONECT 2729 2730 2731 CONECT 2730 2729 CONECT 2731 2729 2732 2733 CONECT 2732 2731 CONECT 2733 2731 2734 CONECT 2734 2733 CONECT 2735 2736 2737 2738 2739 CONECT 2736 2735 CONECT 2737 2735 CONECT 2738 2735 CONECT 2739 2735 CONECT 2740 2741 2742 CONECT 2741 2740 CONECT 2742 2740 2743 2744 CONECT 2743 2742 CONECT 2744 2742 2745 CONECT 2745 2744 CONECT 2746 2747 2748 CONECT 2747 2746 CONECT 2748 2746 2749 2750 CONECT 2749 2748 CONECT 2750 2748 2751 CONECT 2751 2750 CONECT 2752 2753 2754 2755 2756 CONECT 2753 2752 CONECT 2754 2752 CONECT 2755 2752 CONECT 2756 2752 MASTER 351 0 21 10 26 0 0 6 2913 4 180 28 END