HEADER CHAPERONE 01-AUG-20 6ZYH TITLE CRYSTAL STRUCTURE OF GRP78 (70KDA HEAT SHOCK PROTEIN 5 / BIP) ATPASE TITLE 2 DOMAIN IN COMPLEX WITH ADP AND CALCIUM COMPND MOL_ID: 1; COMPND 2 MOLECULE: ENDOPLASMIC RETICULUM CHAPERONE BIP; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: 78 KDA GLUCOSE-REGULATED PROTEIN,GRP-78,BINDING- COMPND 5 IMMUNOGLOBULIN PROTEIN,BIP,HEAT SHOCK PROTEIN 70 FAMILY PROTEIN 5, COMPND 6 HSP70 FAMILY PROTEIN 5,HEAT SHOCK PROTEIN FAMILY A MEMBER 5, COMPND 7 IMMUNOGLOBULIN HEAVY CHAIN-BINDING PROTEIN; COMPND 8 EC: 3.6.4.10; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CRICETULUS GRISEUS; SOURCE 3 ORGANISM_COMMON: CHINESE HAMSTER; SOURCE 4 ORGANISM_TAXID: 10029; SOURCE 5 GENE: HSPA5, GRP78, I79_019946; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS BIP, HSP70, GRP78, ATPASE DOMAIN, NBD, ADP, CHAPERONE EXPDTA X-RAY DIFFRACTION AUTHOR Y.YAN,S.PREISSLER,D.RON REVDAT 2 31-JAN-24 6ZYH 1 REMARK REVDAT 1 16-DEC-20 6ZYH 0 JRNL AUTH S.PREISSLER,C.RATO,Y.YAN,L.A.PERERA,A.CZAKO,D.RON JRNL TITL CALCIUM DEPLETION CHALLENGES ENDOPLASMIC RETICULUM JRNL TITL 2 PROTEOSTASIS BY DESTABILISING BIP-SUBSTRATE COMPLEXES. JRNL REF ELIFE V. 9 2020 JRNL REFN ESSN 2050-084X JRNL PMID 33295873 JRNL DOI 10.7554/ELIFE.62601 REMARK 2 REMARK 2 RESOLUTION. 1.88 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0258 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.88 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.13 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.6 REMARK 3 NUMBER OF REFLECTIONS : 59027 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.210 REMARK 3 R VALUE (WORKING SET) : 0.209 REMARK 3 FREE R VALUE : 0.225 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 3141 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.88 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.93 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4209 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 93.72 REMARK 3 BIN R VALUE (WORKING SET) : 0.2880 REMARK 3 BIN FREE R VALUE SET COUNT : 241 REMARK 3 BIN FREE R VALUE : 0.2960 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5802 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 58 REMARK 3 SOLVENT ATOMS : 218 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 32.47 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.00000 REMARK 3 B22 (A**2) : -0.49000 REMARK 3 B33 (A**2) : -0.58000 REMARK 3 B12 (A**2) : 0.04000 REMARK 3 B13 (A**2) : 1.21000 REMARK 3 B23 (A**2) : -0.54000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.170 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.140 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.104 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.557 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.954 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.948 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6016 ; 0.002 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 5680 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 8143 ; 1.163 ; 1.649 REMARK 3 BOND ANGLES OTHERS (DEGREES): 13176 ; 1.101 ; 1.584 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 770 ; 5.397 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 297 ;32.267 ;22.997 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1064 ;11.591 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 36 ; 9.599 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 812 ; 0.038 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6772 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1210 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 6ZYH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 03-AUG-20. REMARK 100 THE DEPOSITION ID IS D_1292110532. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-JUN-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97628 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 62200 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.880 REMARK 200 RESOLUTION RANGE LOW (A) : 29.140 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.4 REMARK 200 DATA REDUNDANCY : 8.900 REMARK 200 R MERGE (I) : 0.06300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 18.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.88 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.92 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.98900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3IUC REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.06 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.37 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 26% PEG6000, 0.2M CACL2, 0.1MNAOAC REMARK 280 PH5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3280 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 32590 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -59.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 THR A 29 OG1 CG2 REMARK 470 LYS A 46 CG CD CE NZ REMARK 470 ASN A 47 CG OD1 ND2 REMARK 470 ARG A 49 CG CD NE CZ NH1 NH2 REMARK 470 ASP A 56 CG OD1 OD2 REMARK 470 GLN A 57 CG CD OE1 NE2 REMARK 470 GLU A 71 CG CD OE1 OE2 REMARK 470 GLU A 89 CG CD OE1 OE2 REMARK 470 ASP A 131 CG OD1 OD2 REMARK 470 GLU A 217 CG CD OE1 OE2 REMARK 470 LYS A 280 CG CD CE NZ REMARK 470 GLN A 286 CG CD OE1 NE2 REMARK 470 ASP A 350 CG OD1 OD2 REMARK 470 ARG A 386 CG CD NE CZ NH1 NH2 REMARK 470 ASN B 47 CG OD1 ND2 REMARK 470 ARG B 49 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 71 CG CD OE1 OE2 REMARK 470 GLU B 215 CG CD OE1 OE2 REMARK 470 GLU B 217 CG CD OE1 OE2 REMARK 470 LYS B 280 CG CD CE NZ REMARK 470 GLN B 286 CG CD OE1 NE2 REMARK 470 ASP B 350 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 87 57.12 -140.62 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 502 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 252 O REMARK 620 2 ASP A 257 OD1 103.7 REMARK 620 3 ASP A 257 OD2 77.9 49.6 REMARK 620 4 HOH A 651 O 73.4 135.4 87.6 REMARK 620 5 HOH A 681 O 144.7 86.1 83.8 76.0 REMARK 620 6 GLY B 315 O 76.5 78.3 112.3 139.1 138.8 REMARK 620 7 HOH B 604 O 152.7 74.3 116.3 127.5 62.5 76.5 REMARK 620 8 HOH B 689 O 96.9 147.6 162.0 74.4 91.3 82.6 75.9 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 503 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A 315 O REMARK 620 2 HOH A 604 O 14.8 REMARK 620 3 HOH A 672 O 18.0 3.6 REMARK 620 4 HIS B 252 O 19.8 5.3 4.1 REMARK 620 5 ASP B 257 OD1 16.3 3.7 5.7 4.1 REMARK 620 6 ASP B 257 OD2 18.7 5.3 5.8 2.6 2.4 REMARK 620 7 HOH B 669 O 20.0 5.3 2.9 1.7 5.2 4.2 REMARK 620 8 HOH B 704 O 16.5 1.8 2.7 3.5 3.0 3.9 3.5 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 503 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ADP A 501 O1B REMARK 620 2 ADP A 501 O1A 77.4 REMARK 620 3 HOH A 605 O 70.8 97.7 REMARK 620 4 HOH A 642 O 148.0 84.6 138.5 REMARK 620 5 HOH A 652 O 83.4 95.3 147.6 72.2 REMARK 620 6 HOH A 674 O 107.5 168.9 93.3 86.4 75.7 REMARK 620 7 HOH A 689 O 141.0 99.6 71.1 67.7 135.3 82.9 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 502 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ADP B 501 O2B REMARK 620 2 ADP B 501 O2A 79.9 REMARK 620 3 HOH B 613 O 69.8 98.5 REMARK 620 4 HOH B 643 O 146.4 85.1 142.7 REMARK 620 5 HOH B 663 O 79.2 96.0 142.6 72.6 REMARK 620 6 HOH B 695 O 103.2 170.8 90.7 87.9 76.3 REMARK 620 7 HOH B 702 O 143.2 102.7 73.6 69.4 135.6 80.1 REMARK 620 N 1 2 3 4 5 6 DBREF 6ZYH A 28 406 UNP G3I8R9 BIP_CRIGR 28 406 DBREF 6ZYH B 28 406 UNP G3I8R9 BIP_CRIGR 28 406 SEQRES 1 A 379 GLY THR VAL VAL GLY ILE ASP LEU GLY THR THR TYR SER SEQRES 2 A 379 CYS VAL GLY VAL PHE LYS ASN GLY ARG VAL GLU ILE ILE SEQRES 3 A 379 ALA ASN ASP GLN GLY ASN ARG ILE THR PRO SER TYR VAL SEQRES 4 A 379 ALA PHE THR PRO GLU GLY GLU ARG LEU ILE GLY ASP ALA SEQRES 5 A 379 ALA LYS ASN GLN LEU THR SER ASN PRO GLU ASN THR VAL SEQRES 6 A 379 PHE ASP ALA LYS ARG LEU ILE GLY ARG THR TRP ASN ASP SEQRES 7 A 379 PRO SER VAL GLN GLN ASP ILE LYS PHE LEU PRO PHE LYS SEQRES 8 A 379 VAL VAL GLU LYS LYS THR LYS PRO TYR ILE GLN VAL ASP SEQRES 9 A 379 ILE GLY GLY GLY GLN THR LYS THR PHE ALA PRO GLU GLU SEQRES 10 A 379 ILE SER ALA MET VAL LEU THR LYS MET LYS GLU THR ALA SEQRES 11 A 379 GLU ALA TYR LEU GLY LYS LYS VAL THR HIS ALA VAL VAL SEQRES 12 A 379 THR VAL PRO ALA TYR PHE ASN ASP ALA GLN ARG GLN ALA SEQRES 13 A 379 THR LYS ASP ALA GLY THR ILE ALA GLY LEU ASN VAL MET SEQRES 14 A 379 ARG ILE ILE ASN GLU PRO THR ALA ALA ALA ILE ALA TYR SEQRES 15 A 379 GLY LEU ASP LYS ARG GLU GLY GLU LYS ASN ILE LEU VAL SEQRES 16 A 379 PHE ASP LEU GLY GLY GLY THR PHE ASP VAL SER LEU LEU SEQRES 17 A 379 THR ILE ASP ASN GLY VAL PHE GLU VAL VAL ALA THR ASN SEQRES 18 A 379 GLY ASP THR HIS LEU GLY GLY GLU ASP PHE ASP GLN ARG SEQRES 19 A 379 VAL MET GLU HIS PHE ILE LYS LEU TYR LYS LYS LYS THR SEQRES 20 A 379 GLY LYS ASP VAL ARG LYS ASP ASN ARG ALA VAL GLN LYS SEQRES 21 A 379 LEU ARG ARG GLU VAL GLU LYS ALA LYS ARG ALA LEU SER SEQRES 22 A 379 SER GLN HIS GLN ALA ARG ILE GLU ILE GLU SER PHE PHE SEQRES 23 A 379 GLU GLY GLU ASP PHE SER GLU THR LEU THR ARG ALA LYS SEQRES 24 A 379 PHE GLU GLU LEU ASN MET ASP LEU PHE ARG SER THR MET SEQRES 25 A 379 LYS PRO VAL GLN LYS VAL LEU GLU ASP SER ASP LEU LYS SEQRES 26 A 379 LYS SER ASP ILE ASP GLU ILE VAL LEU VAL GLY GLY SER SEQRES 27 A 379 THR ARG ILE PRO LYS ILE GLN GLN LEU VAL LYS GLU PHE SEQRES 28 A 379 PHE ASN GLY LYS GLU PRO SER ARG GLY ILE ASN PRO ASP SEQRES 29 A 379 GLU ALA VAL ALA TYR GLY ALA ALA VAL GLN ALA GLY VAL SEQRES 30 A 379 LEU SER SEQRES 1 B 379 GLY THR VAL VAL GLY ILE ASP LEU GLY THR THR TYR SER SEQRES 2 B 379 CYS VAL GLY VAL PHE LYS ASN GLY ARG VAL GLU ILE ILE SEQRES 3 B 379 ALA ASN ASP GLN GLY ASN ARG ILE THR PRO SER TYR VAL SEQRES 4 B 379 ALA PHE THR PRO GLU GLY GLU ARG LEU ILE GLY ASP ALA SEQRES 5 B 379 ALA LYS ASN GLN LEU THR SER ASN PRO GLU ASN THR VAL SEQRES 6 B 379 PHE ASP ALA LYS ARG LEU ILE GLY ARG THR TRP ASN ASP SEQRES 7 B 379 PRO SER VAL GLN GLN ASP ILE LYS PHE LEU PRO PHE LYS SEQRES 8 B 379 VAL VAL GLU LYS LYS THR LYS PRO TYR ILE GLN VAL ASP SEQRES 9 B 379 ILE GLY GLY GLY GLN THR LYS THR PHE ALA PRO GLU GLU SEQRES 10 B 379 ILE SER ALA MET VAL LEU THR LYS MET LYS GLU THR ALA SEQRES 11 B 379 GLU ALA TYR LEU GLY LYS LYS VAL THR HIS ALA VAL VAL SEQRES 12 B 379 THR VAL PRO ALA TYR PHE ASN ASP ALA GLN ARG GLN ALA SEQRES 13 B 379 THR LYS ASP ALA GLY THR ILE ALA GLY LEU ASN VAL MET SEQRES 14 B 379 ARG ILE ILE ASN GLU PRO THR ALA ALA ALA ILE ALA TYR SEQRES 15 B 379 GLY LEU ASP LYS ARG GLU GLY GLU LYS ASN ILE LEU VAL SEQRES 16 B 379 PHE ASP LEU GLY GLY GLY THR PHE ASP VAL SER LEU LEU SEQRES 17 B 379 THR ILE ASP ASN GLY VAL PHE GLU VAL VAL ALA THR ASN SEQRES 18 B 379 GLY ASP THR HIS LEU GLY GLY GLU ASP PHE ASP GLN ARG SEQRES 19 B 379 VAL MET GLU HIS PHE ILE LYS LEU TYR LYS LYS LYS THR SEQRES 20 B 379 GLY LYS ASP VAL ARG LYS ASP ASN ARG ALA VAL GLN LYS SEQRES 21 B 379 LEU ARG ARG GLU VAL GLU LYS ALA LYS ARG ALA LEU SER SEQRES 22 B 379 SER GLN HIS GLN ALA ARG ILE GLU ILE GLU SER PHE PHE SEQRES 23 B 379 GLU GLY GLU ASP PHE SER GLU THR LEU THR ARG ALA LYS SEQRES 24 B 379 PHE GLU GLU LEU ASN MET ASP LEU PHE ARG SER THR MET SEQRES 25 B 379 LYS PRO VAL GLN LYS VAL LEU GLU ASP SER ASP LEU LYS SEQRES 26 B 379 LYS SER ASP ILE ASP GLU ILE VAL LEU VAL GLY GLY SER SEQRES 27 B 379 THR ARG ILE PRO LYS ILE GLN GLN LEU VAL LYS GLU PHE SEQRES 28 B 379 PHE ASN GLY LYS GLU PRO SER ARG GLY ILE ASN PRO ASP SEQRES 29 B 379 GLU ALA VAL ALA TYR GLY ALA ALA VAL GLN ALA GLY VAL SEQRES 30 B 379 LEU SER HET ADP A 501 27 HET CA A 502 1 HET CA A 503 1 HET ADP B 501 27 HET CA B 502 1 HET CA B 503 1 HETNAM ADP ADENOSINE-5'-DIPHOSPHATE HETNAM CA CALCIUM ION FORMUL 3 ADP 2(C10 H15 N5 O10 P2) FORMUL 4 CA 4(CA 2+) FORMUL 9 HOH *218(H2 O) HELIX 1 AA1 GLY A 77 GLN A 83 1 7 HELIX 2 AA2 ASP A 94 LEU A 98 5 5 HELIX 3 AA3 ASP A 105 ILE A 112 1 8 HELIX 4 AA4 LYS A 113 LEU A 115 5 3 HELIX 5 AA5 ALA A 141 GLY A 162 1 22 HELIX 6 AA6 ASN A 177 ALA A 191 1 15 HELIX 7 AA7 GLU A 201 TYR A 209 1 9 HELIX 8 AA8 GLY A 210 ARG A 214 5 5 HELIX 9 AA9 GLY A 254 GLY A 275 1 22 HELIX 10 AB1 ASP A 281 LEU A 299 1 19 HELIX 11 AB2 ARG A 324 THR A 338 1 15 HELIX 12 AB3 THR A 338 SER A 349 1 12 HELIX 13 AB4 LYS A 352 ILE A 356 5 5 HELIX 14 AB5 GLY A 363 ARG A 367 5 5 HELIX 15 AB6 ILE A 368 PHE A 379 1 12 HELIX 16 AB7 GLU A 392 SER A 406 1 15 HELIX 17 AB8 GLY B 77 ASN B 82 1 6 HELIX 18 AB9 ASP B 94 LEU B 98 5 5 HELIX 19 AC1 ASP B 105 ILE B 112 1 8 HELIX 20 AC2 ALA B 141 GLY B 162 1 22 HELIX 21 AC3 ASN B 177 ALA B 191 1 15 HELIX 22 AC4 GLU B 201 TYR B 209 1 9 HELIX 23 AC5 GLY B 254 GLY B 275 1 22 HELIX 24 AC6 ASP B 281 LEU B 299 1 19 HELIX 25 AC7 ARG B 324 THR B 338 1 15 HELIX 26 AC8 THR B 338 SER B 349 1 12 HELIX 27 AC9 LYS B 352 ILE B 356 5 5 HELIX 28 AD1 GLY B 363 ARG B 367 5 5 HELIX 29 AD2 ILE B 368 PHE B 379 1 12 HELIX 30 AD3 GLU B 392 SER B 406 1 15 SHEET 1 AA1 3 VAL A 50 ILE A 52 0 SHEET 2 AA1 3 TYR A 39 PHE A 45 -1 N VAL A 44 O GLU A 51 SHEET 3 AA1 3 THR A 62 PRO A 63 -1 O THR A 62 N SER A 40 SHEET 1 AA2 5 VAL A 50 ILE A 52 0 SHEET 2 AA2 5 TYR A 39 PHE A 45 -1 N VAL A 44 O GLU A 51 SHEET 3 AA2 5 VAL A 30 LEU A 35 -1 N GLY A 32 O GLY A 43 SHEET 4 AA2 5 HIS A 167 VAL A 172 1 O VAL A 169 N ILE A 33 SHEET 5 AA2 5 ASN A 194 ASN A 200 1 O ASN A 194 N ALA A 168 SHEET 1 AA3 3 ARG A 74 ILE A 76 0 SHEET 2 AA3 3 VAL A 66 PHE A 68 -1 N ALA A 67 O LEU A 75 SHEET 3 AA3 3 THR A 91 VAL A 92 -1 O VAL A 92 N VAL A 66 SHEET 1 AA4 3 LYS A 118 LYS A 122 0 SHEET 2 AA4 3 LYS A 125 GLY A 133 -1 O TYR A 127 N VAL A 120 SHEET 3 AA4 3 GLN A 136 PHE A 140 -1 O PHE A 140 N ILE A 128 SHEET 1 AA5 4 VAL A 241 ASP A 250 0 SHEET 2 AA5 4 PHE A 230 ASP A 238 -1 N LEU A 234 O ALA A 246 SHEET 3 AA5 4 GLU A 217 LEU A 225 -1 N ILE A 220 O LEU A 235 SHEET 4 AA5 4 GLU A 358 VAL A 362 1 O VAL A 360 N LEU A 221 SHEET 1 AA6 2 GLN A 304 PHE A 313 0 SHEET 2 AA6 2 GLU A 316 THR A 323 -1 O GLU A 320 N ILE A 307 SHEET 1 AA7 3 VAL B 50 ILE B 52 0 SHEET 2 AA7 3 TYR B 39 PHE B 45 -1 N VAL B 44 O GLU B 51 SHEET 3 AA7 3 THR B 62 PRO B 63 -1 O THR B 62 N SER B 40 SHEET 1 AA8 5 VAL B 50 ILE B 52 0 SHEET 2 AA8 5 TYR B 39 PHE B 45 -1 N VAL B 44 O GLU B 51 SHEET 3 AA8 5 VAL B 30 LEU B 35 -1 N ASP B 34 O CYS B 41 SHEET 4 AA8 5 HIS B 167 VAL B 172 1 O VAL B 169 N ILE B 33 SHEET 5 AA8 5 ASN B 194 ASN B 200 1 O ASN B 194 N ALA B 168 SHEET 1 AA9 3 ARG B 74 ILE B 76 0 SHEET 2 AA9 3 VAL B 66 PHE B 68 -1 N ALA B 67 O LEU B 75 SHEET 3 AA9 3 THR B 91 VAL B 92 -1 O VAL B 92 N VAL B 66 SHEET 1 AB1 3 LYS B 118 LYS B 122 0 SHEET 2 AB1 3 LYS B 125 GLY B 133 -1 O TYR B 127 N VAL B 120 SHEET 3 AB1 3 GLN B 136 PHE B 140 -1 O PHE B 140 N ILE B 128 SHEET 1 AB2 4 VAL B 241 ASP B 250 0 SHEET 2 AB2 4 PHE B 230 ASP B 238 -1 N LEU B 234 O ALA B 246 SHEET 3 AB2 4 GLU B 217 LEU B 225 -1 N ILE B 220 O LEU B 235 SHEET 4 AB2 4 GLU B 358 VAL B 362 1 O VAL B 360 N PHE B 223 SHEET 1 AB3 2 GLN B 304 PHE B 313 0 SHEET 2 AB3 2 GLU B 316 THR B 323 -1 O GLU B 320 N ILE B 307 LINK O HIS A 252 CA CA A 502 1555 1555 2.27 LINK OD1 ASP A 257 CA CA A 502 1555 1555 2.57 LINK OD2 ASP A 257 CA CA A 502 1555 1555 2.67 LINK O GLY A 315 CA CA B 503 1555 1455 2.43 LINK O1B ADP A 501 CA CA A 503 1555 1555 2.31 LINK O1A ADP A 501 CA CA A 503 1555 1555 2.33 LINK CA CA A 502 O HOH A 651 1555 1555 2.39 LINK CA CA A 502 O HOH A 681 1555 1555 2.46 LINK CA CA A 502 O GLY B 315 1555 1555 2.42 LINK CA CA A 502 O HOH B 604 1555 1555 2.53 LINK CA CA A 502 O HOH B 689 1555 1555 2.44 LINK CA CA A 503 O HOH A 605 1555 1555 2.31 LINK CA CA A 503 O HOH A 642 1555 1555 2.43 LINK CA CA A 503 O HOH A 652 1555 1555 2.39 LINK CA CA A 503 O HOH A 674 1555 1555 2.46 LINK CA CA A 503 O HOH A 689 1555 1555 2.38 LINK O HOH A 604 CA CA B 503 1655 1555 2.61 LINK O HOH A 672 CA CA B 503 1655 1555 2.52 LINK O HIS B 252 CA CA B 503 1555 1555 2.26 LINK OD1 ASP B 257 CA CA B 503 1555 1555 2.52 LINK OD2 ASP B 257 CA CA B 503 1555 1555 2.67 LINK O2B ADP B 501 CA CA B 502 1555 1555 2.32 LINK O2A ADP B 501 CA CA B 502 1555 1555 2.31 LINK CA CA B 502 O HOH B 613 1555 1555 2.36 LINK CA CA B 502 O HOH B 643 1555 1555 2.35 LINK CA CA B 502 O HOH B 663 1555 1555 2.41 LINK CA CA B 502 O HOH B 695 1555 1555 2.39 LINK CA CA B 502 O HOH B 702 1555 1555 2.36 LINK CA CA B 503 O HOH B 669 1555 1555 2.43 LINK CA CA B 503 O HOH B 704 1555 1555 2.51 CRYST1 48.359 51.862 93.082 78.07 86.72 62.28 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020679 -0.010867 0.001053 0.00000 SCALE2 0.000000 0.021782 -0.004534 0.00000 SCALE3 0.000000 0.000000 0.010991 0.00000