HEADER SUGAR BINDING PROTEIN 05-AUG-20 6ZZW TITLE STRUCTURE OF THE N TERMINAL DOMAIN OF BC2L-C LECTIN (1-131) IN COMPLEX TITLE 2 WITH GLOBO H (H-TYPE 3) AND CAS NO 912569-62-1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: LECTIN; COMPND 3 CHAIN: A, C, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BURKHOLDERIA CENOCEPACIA (STRAIN ATCC BAA-245 / SOURCE 3 DSM 16553 / LMG 16656 / NCTC 13227 / J2315 / CF5610); SOURCE 4 ORGANISM_TAXID: 216591; SOURCE 5 STRAIN: ATCC BAA-245 / DSM 16553 / LMG 16656 / NCTC 13227 / J2315 / SOURCE 6 CF5610; SOURCE 7 GENE: BCAM0185; SOURCE 8 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 9 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS LECTINS, DRUG RESISTANCE, GLYCOMIMETICS, ANTI-ADHESIVE THERAPY, DRUG KEYWDS 2 DESIGN, FRAGMENT BASED SCREENING, SUGAR BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR K.LAL,R.BERMEO,A.IMBERTY,A.VARROT REVDAT 3 31-JAN-24 6ZZW 1 REMARK REVDAT 2 28-JUL-21 6ZZW 1 JRNL REVDAT 1 07-APR-21 6ZZW 0 JRNL AUTH K.LAL,R.BERMEO,J.CRAMER,F.VASILE,B.ERNST,A.IMBERTY, JRNL AUTH 2 A.BERNARDI,A.VARROT,L.BELVISI JRNL TITL PREDICTION AND VALIDATION OF A DRUGGABLE SITE ON VIRULENCE JRNL TITL 2 FACTOR OF DRUG RESISTANT BURKHOLDERIA CENOCEPACIA*. JRNL REF CHEMISTRY V. 27 10341 2021 JRNL REFN ISSN 0947-6539 JRNL PMID 33769626 JRNL DOI 10.1002/CHEM.202100252 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0258 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.13 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 3 NUMBER OF REFLECTIONS : 24288 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.184 REMARK 3 R VALUE (WORKING SET) : 0.181 REMARK 3 FREE R VALUE : 0.238 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 1224 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1821 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.63 REMARK 3 BIN R VALUE (WORKING SET) : 0.2340 REMARK 3 BIN FREE R VALUE SET COUNT : 76 REMARK 3 BIN FREE R VALUE : 0.2930 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2881 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 206 REMARK 3 SOLVENT ATOMS : 192 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 20.85 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.95000 REMARK 3 B22 (A**2) : -1.31000 REMARK 3 B33 (A**2) : 2.19000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.12000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.191 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.170 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.129 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.538 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.955 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.911 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3170 ; 0.014 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 2897 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4359 ; 1.840 ; 1.717 REMARK 3 BOND ANGLES OTHERS (DEGREES): 6729 ; 1.496 ; 1.634 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 394 ; 7.103 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 101 ;34.078 ;22.376 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 421 ;14.246 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 9 ;10.999 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 486 ; 0.093 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3388 ; 0.010 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 621 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 3 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 0 130 B 0 130 3775 0.080 0.050 REMARK 3 2 A 0 129 C 0 129 3770 0.080 0.050 REMARK 3 3 B 0 129 C 0 129 3705 0.080 0.050 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 6ZZW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 05-AUG-20. REMARK 100 THE DEPOSITION ID IS D_1292110591. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-FEB-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SOLEIL REMARK 200 BEAMLINE : PROXIMA 1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9786 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.4 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25522 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 37.130 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 200 DATA REDUNDANCY : 6.900 REMARK 200 R MERGE (I) : 0.13400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.94 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.1 REMARK 200 DATA REDUNDANCY IN SHELL : 7.10 REMARK 200 R MERGE FOR SHELL (I) : 0.53100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6TIG REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 37.02 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.95 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 5.5 MG/ML OF PROTEIN, 1.2 M SODIUM REMARK 280 CITRATE, 10 MM LIGAND AT 292 K TEMPERATURE AND CRYOPROTECTED REMARK 280 WITH 2.5 M SODIUM MALONATE, PH 7, VAPOR DIFFUSION, HANGING DROP REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 37.22950 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 21.45600 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 37.22950 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 21.45600 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 10550 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13830 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 19.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C, B, D, F, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -2 REMARK 465 HIS A -1 REMARK 465 ALA A 131 REMARK 465 GLY C -2 REMARK 465 HIS C -1 REMARK 465 ALA C 131 REMARK 465 GLY B -2 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 30 CG CD CE NZ REMARK 470 ASP A 35 CG OD1 OD2 REMARK 470 GLN A 65 NE2 REMARK 470 MET C 0 CG SD CE REMARK 470 LYS C 30 CG CD CE NZ REMARK 470 TRP C 127 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP C 127 CZ3 CH2 REMARK 470 HIS B -1 CG ND1 CD2 CE1 NE2 REMARK 470 LYS B 30 CG CD CE NZ REMARK 470 ASP B 35 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU B 81 CD GLU B 81 OE2 -0.074 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 63 -165.28 -115.55 REMARK 500 THR C 63 -164.80 -114.93 REMARK 500 THR B 63 -165.57 -115.01 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 202 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLN A 65 O REMARK 620 2 HOH A 360 O 87.4 REMARK 620 3 GLN C 65 O 33.6 72.3 REMARK 620 4 HOH C 357 O 157.8 70.6 133.7 REMARK 620 5 GLN B 65 O 45.3 52.2 57.2 114.6 REMARK 620 6 HOH B 357 O 106.9 64.9 73.3 66.5 107.3 REMARK 620 N 1 2 3 4 5 DBREF 6ZZW A 0 131 UNP B4EH86 B4EH86_BURCJ 1 132 DBREF 6ZZW C 0 131 UNP B4EH86 B4EH86_BURCJ 1 132 DBREF 6ZZW B 0 131 UNP B4EH86 B4EH86_BURCJ 1 132 SEQADV 6ZZW GLY A -2 UNP B4EH86 EXPRESSION TAG SEQADV 6ZZW HIS A -1 UNP B4EH86 EXPRESSION TAG SEQADV 6ZZW GLY C -2 UNP B4EH86 EXPRESSION TAG SEQADV 6ZZW HIS C -1 UNP B4EH86 EXPRESSION TAG SEQADV 6ZZW GLY B -2 UNP B4EH86 EXPRESSION TAG SEQADV 6ZZW HIS B -1 UNP B4EH86 EXPRESSION TAG SEQRES 1 A 134 GLY HIS MET PRO LEU LEU SER ALA SER ILE VAL SER ALA SEQRES 2 A 134 PRO VAL VAL THR SER GLU THR TYR VAL ASP ILE PRO GLY SEQRES 3 A 134 LEU TYR LEU ASP VAL ALA LYS ALA GLY ILE ARG ASP GLY SEQRES 4 A 134 LYS LEU GLN VAL ILE LEU ASN VAL PRO THR PRO TYR ALA SEQRES 5 A 134 THR GLY ASN ASN PHE PRO GLY ILE TYR PHE ALA ILE ALA SEQRES 6 A 134 THR ASN GLN GLY VAL VAL ALA ASP GLY CYS PHE THR TYR SEQRES 7 A 134 SER SER LYS VAL PRO GLU SER THR GLY ARG MET PRO PHE SEQRES 8 A 134 THR LEU VAL ALA THR ILE ASP VAL GLY SER GLY VAL THR SEQRES 9 A 134 PHE VAL LYS GLY GLN TRP LYS SER VAL ARG GLY SER ALA SEQRES 10 A 134 MET HIS ILE ASP SER TYR ALA SER LEU SER ALA ILE TRP SEQRES 11 A 134 GLY THR ALA ALA SEQRES 1 C 134 GLY HIS MET PRO LEU LEU SER ALA SER ILE VAL SER ALA SEQRES 2 C 134 PRO VAL VAL THR SER GLU THR TYR VAL ASP ILE PRO GLY SEQRES 3 C 134 LEU TYR LEU ASP VAL ALA LYS ALA GLY ILE ARG ASP GLY SEQRES 4 C 134 LYS LEU GLN VAL ILE LEU ASN VAL PRO THR PRO TYR ALA SEQRES 5 C 134 THR GLY ASN ASN PHE PRO GLY ILE TYR PHE ALA ILE ALA SEQRES 6 C 134 THR ASN GLN GLY VAL VAL ALA ASP GLY CYS PHE THR TYR SEQRES 7 C 134 SER SER LYS VAL PRO GLU SER THR GLY ARG MET PRO PHE SEQRES 8 C 134 THR LEU VAL ALA THR ILE ASP VAL GLY SER GLY VAL THR SEQRES 9 C 134 PHE VAL LYS GLY GLN TRP LYS SER VAL ARG GLY SER ALA SEQRES 10 C 134 MET HIS ILE ASP SER TYR ALA SER LEU SER ALA ILE TRP SEQRES 11 C 134 GLY THR ALA ALA SEQRES 1 B 134 GLY HIS MET PRO LEU LEU SER ALA SER ILE VAL SER ALA SEQRES 2 B 134 PRO VAL VAL THR SER GLU THR TYR VAL ASP ILE PRO GLY SEQRES 3 B 134 LEU TYR LEU ASP VAL ALA LYS ALA GLY ILE ARG ASP GLY SEQRES 4 B 134 LYS LEU GLN VAL ILE LEU ASN VAL PRO THR PRO TYR ALA SEQRES 5 B 134 THR GLY ASN ASN PHE PRO GLY ILE TYR PHE ALA ILE ALA SEQRES 6 B 134 THR ASN GLN GLY VAL VAL ALA ASP GLY CYS PHE THR TYR SEQRES 7 B 134 SER SER LYS VAL PRO GLU SER THR GLY ARG MET PRO PHE SEQRES 8 B 134 THR LEU VAL ALA THR ILE ASP VAL GLY SER GLY VAL THR SEQRES 9 B 134 PHE VAL LYS GLY GLN TRP LYS SER VAL ARG GLY SER ALA SEQRES 10 B 134 MET HIS ILE ASP SER TYR ALA SER LEU SER ALA ILE TRP SEQRES 11 B 134 GLY THR ALA ALA HET GAL D 1 12 HET GLA D 2 11 HET NGA D 3 14 HET GAL D 4 11 HET FUC D 5 10 HET GLA F 1 12 HET NGA F 2 14 HET GAL F 3 11 HET FUC F 4 10 HET GAL E 1 12 HET GLA E 2 11 HET NGA E 3 14 HET GAL E 4 11 HET FUC E 5 10 HET QT5 A 201 14 HET NA A 202 1 HET QT5 C 201 14 HET QT5 B 201 14 HETNAM GAL BETA-D-GALACTOPYRANOSE HETNAM GLA ALPHA-D-GALACTOPYRANOSE HETNAM NGA 2-ACETAMIDO-2-DEOXY-BETA-D-GALACTOPYRANOSE HETNAM FUC ALPHA-L-FUCOPYRANOSE HETNAM QT5 [3-(2-METHYLIMIDAZOL-1-YL)PHENYL]METHANAMINE HETNAM NA SODIUM ION HETSYN GAL BETA-D-GALACTOSE; D-GALACTOSE; GALACTOSE HETSYN GLA ALPHA-D-GALACTOSE; D-GALACTOSE; GALACTOSE; ALPHA D- HETSYN 2 GLA GALACTOSE HETSYN NGA N-ACETYL-BETA-D-GALACTOSAMINE; 2-ACETAMIDO-2-DEOXY- HETSYN 2 NGA BETA-D-GALACTOSE; 2-ACETAMIDO-2-DEOXY-D-GALACTOSE; 2- HETSYN 3 NGA ACETAMIDO-2-DEOXY-GALACTOSE; N-ACETYL-D-GALACTOSAMINE HETSYN FUC ALPHA-L-FUCOSE; 6-DEOXY-ALPHA-L-GALACTOPYRANOSE; L- HETSYN 2 FUC FUCOSE; FUCOSE FORMUL 4 GAL 5(C6 H12 O6) FORMUL 4 GLA 3(C6 H12 O6) FORMUL 4 NGA 3(C8 H15 N O6) FORMUL 4 FUC 3(C6 H12 O5) FORMUL 7 QT5 3(C11 H13 N3) FORMUL 8 NA NA 1+ FORMUL 11 HOH *192(H2 O) HELIX 1 AA1 GLY A 97 GLY A 99 5 3 HELIX 2 AA2 GLY C 97 GLY C 99 5 3 HELIX 3 AA3 ALA B 29 GLY B 32 5 4 HELIX 4 AA4 GLY B 97 GLY B 99 5 3 SHEET 1 AA1 4 LEU A 2 ILE A 7 0 SHEET 2 AA1 4 ALA A 121 GLY A 128 -1 O LEU A 123 N ALA A 5 SHEET 3 AA1 4 LYS A 37 VAL A 44 -1 N ASN A 43 O SER A 122 SHEET 4 AA1 4 PHE A 88 ASP A 95 -1 O ALA A 92 N VAL A 40 SHEET 1 AA2 4 VAL A 19 ASP A 27 0 SHEET 2 AA2 4 PHE A 102 VAL A 110 -1 O GLY A 105 N ILE A 21 SHEET 3 AA2 4 GLY A 56 THR A 63 -1 N ALA A 62 O LYS A 104 SHEET 4 AA2 4 GLY A 66 THR A 74 -1 O VAL A 68 N ILE A 61 SHEET 1 AA3 2 TYR A 48 THR A 50 0 SHEET 2 AA3 2 ALA A 114 HIS A 116 -1 O ALA A 114 N THR A 50 SHEET 1 AA4 4 LEU C 2 ILE C 7 0 SHEET 2 AA4 4 ALA C 121 GLY C 128 -1 O LEU C 123 N ALA C 5 SHEET 3 AA4 4 LYS C 37 VAL C 44 -1 N LYS C 37 O GLY C 128 SHEET 4 AA4 4 PHE C 88 ASP C 95 -1 O ALA C 92 N VAL C 40 SHEET 1 AA5 4 VAL C 19 ASP C 27 0 SHEET 2 AA5 4 PHE C 102 VAL C 110 -1 O VAL C 103 N LEU C 26 SHEET 3 AA5 4 GLY C 56 THR C 63 -1 N ALA C 62 O LYS C 104 SHEET 4 AA5 4 GLY C 66 THR C 74 -1 O VAL C 68 N ILE C 61 SHEET 1 AA6 2 TYR C 48 THR C 50 0 SHEET 2 AA6 2 ALA C 114 HIS C 116 -1 O ALA C 114 N THR C 50 SHEET 1 AA7 4 LEU B 2 ILE B 7 0 SHEET 2 AA7 4 ALA B 121 GLY B 128 -1 O ALA B 125 N LEU B 3 SHEET 3 AA7 4 LYS B 37 VAL B 44 -1 N ASN B 43 O SER B 122 SHEET 4 AA7 4 PHE B 88 ASP B 95 -1 O ALA B 92 N VAL B 40 SHEET 1 AA8 4 VAL B 19 ASP B 27 0 SHEET 2 AA8 4 PHE B 102 VAL B 110 -1 O GLY B 105 N ILE B 21 SHEET 3 AA8 4 GLY B 56 THR B 63 -1 N ALA B 62 O LYS B 104 SHEET 4 AA8 4 GLY B 66 THR B 74 -1 O VAL B 68 N ILE B 61 SHEET 1 AA9 2 TYR B 48 THR B 50 0 SHEET 2 AA9 2 ALA B 114 HIS B 116 -1 O ALA B 114 N THR B 50 LINK O4 GAL D 1 C1 GLA D 2 1555 1555 1.41 LINK O3 GLA D 2 C1 NGA D 3 1555 1555 1.43 LINK O3 NGA D 3 C1 GAL D 4 1555 1555 1.41 LINK O2 GAL D 4 C1 FUC D 5 1555 1555 1.44 LINK O3 GLA F 1 C1 NGA F 2 1555 1555 1.51 LINK O3 NGA F 2 C1 GAL F 3 1555 1555 1.40 LINK O2 GAL F 3 C1 FUC F 4 1555 1555 1.45 LINK O4 GAL E 1 C1 GLA E 2 1555 1555 1.45 LINK O3 GLA E 2 C1 NGA E 3 1555 1555 1.41 LINK O3 NGA E 3 C1 GAL E 4 1555 1555 1.39 LINK O2 GAL E 4 C1 FUC E 5 1555 1555 1.43 LINK O GLN A 65 NA NA A 202 1555 1555 2.28 LINK NA NA A 202 O AHOH A 360 1555 1555 2.72 LINK NA NA A 202 O GLN C 65 1545 1555 2.41 LINK NA NA A 202 O BHOH C 357 1555 1555 2.40 LINK NA NA A 202 O GLN B 65 3445 1555 2.33 LINK NA NA A 202 O AHOH B 357 1555 3555 2.61 CRYST1 74.459 42.912 103.345 90.00 96.10 90.00 C 1 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013430 0.000000 0.001434 0.00000 SCALE2 0.000000 0.023304 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009731 0.00000