HEADER HYDROLASE 05-JUN-18 6A0L TITLE CYCLIC ALPHA-MALTOSYL-(1-->6)-MALTOSE HYDROLASE FROM ARTHROBACTER TITLE 2 GLOBIFORMIS, COMPLEX WITH MALTOSE COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYCLIC MALTOSYL-MALTOSE HYDROLASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARTHROBACTER GLOBIFORMIS; SOURCE 3 ORGANISM_TAXID: 1665; SOURCE 4 GENE: CMMF; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR M.KOHNO,T.ARAKAWA,T.MORI,T.NISHIMOTO,S.FUSHINOBU REVDAT 5 22-NOV-23 6A0L 1 HETSYN REVDAT 4 29-JUL-20 6A0L 1 COMPND REMARK HET HETNAM REVDAT 4 2 1 FORMUL LINK SITE ATOM REVDAT 3 07-NOV-18 6A0L 1 JRNL REVDAT 2 19-SEP-18 6A0L 1 JRNL REVDAT 1 12-SEP-18 6A0L 0 JRNL AUTH M.KOHNO,T.ARAKAWA,H.OTA,T.MORI,T.NISHIMOTO,S.FUSHINOBU JRNL TITL STRUCTURAL FEATURES OF A BACTERIAL CYCLIC JRNL TITL 2 ALPHA-MALTOSYL-(1→6)-MALTOSE (CMM) HYDROLASE CRITICAL JRNL TITL 3 FOR CMM RECOGNITION AND HYDROLYSIS. JRNL REF J. BIOL. CHEM. V. 293 16874 2018 JRNL REFN ESSN 1083-351X JRNL PMID 30181215 JRNL DOI 10.1074/JBC.RA118.004472 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH T.MORI,T.NISHIMOTO,T.OKURA,H.CHAEN,S.FUKUDA REMARK 1 TITL PURIFICATION AND CHARACTERIZATION OF CYCLIC REMARK 1 TITL 2 MALTOSYL-(1-->6)-MALTOSE HYDROLASE AND ALPHA-GLUCOSIDASE REMARK 1 TITL 3 FROM AN ARTHROBACTER GLOBIFORMIS STRAIN. REMARK 1 REF BIOSCI. BIOTECHNOL. BIOCHEM. V. 72 1673 2008 REMARK 1 REFN ISSN 1347-6947 REMARK 1 PMID 18603794 REMARK 1 DOI 10.1271/BBB.70759 REMARK 1 REFERENCE 2 REMARK 1 AUTH T.MORI,T.NISHIMOTO,T.OKURA,H.CHAEN,S.FUKUDA REMARK 1 TITL CLONING, SEQUENCING AND EXPRESSION OF THE GENES ENCODING REMARK 1 TITL 2 CYCLIC ALPHA-MALTOSYL-(1-->6)-MALTOSE HYDROLASE AND REMARK 1 TITL 3 ALPHA-GLUCOSIDASE FROM AN ARTHROBACTER GLOBIFORMIS STRAIN REMARK 1 REF JOURNAL OF APPLIED V. 58 39 2011 REMARK 1 REF 2 GLYCOSCIENCE REMARK 1 REFN ISSN 1344-7882 REMARK 1 DOI 10.5458/JAG.JAG.JAG-2010_011 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0151 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 91.10 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 84.2 REMARK 3 NUMBER OF REFLECTIONS : 25316 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.256 REMARK 3 R VALUE (WORKING SET) : 0.252 REMARK 3 FREE R VALUE : 0.323 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1344 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.05 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.11 REMARK 3 REFLECTION IN BIN (WORKING SET) : 731 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 33.30 REMARK 3 BIN R VALUE (WORKING SET) : 0.3450 REMARK 3 BIN FREE R VALUE SET COUNT : 36 REMARK 3 BIN FREE R VALUE : 0.4410 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3412 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 23 REMARK 3 SOLVENT ATOMS : 122 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 31.53 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.01000 REMARK 3 B22 (A**2) : -0.01000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.317 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.269 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.235 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 9.368 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.923 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.850 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3547 ; 0.015 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 3195 ; 0.003 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4850 ; 1.777 ; 1.932 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7316 ; 1.155 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 438 ; 6.963 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 178 ;35.913 ;23.315 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 493 ;17.691 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 27 ;20.200 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 527 ; 0.105 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4098 ; 0.008 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 877 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1755 ; 2.364 ; 3.115 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1754 ; 2.363 ; 3.113 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2192 ; 3.592 ; 4.665 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2193 ; 3.591 ; 4.667 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1792 ; 2.156 ; 3.223 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1792 ; 2.156 ; 3.223 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2659 ; 3.342 ; 4.784 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 4047 ; 5.433 ;36.748 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 4048 ; 5.433 ;36.751 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 6A0L COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 13-JUN-18. REMARK 100 THE DEPOSITION ID IS D_1300007864. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-NOV-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-1A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 4M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26693 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 91.100 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 88.6 REMARK 200 DATA REDUNDANCY : 4.000 REMARK 200 R MERGE (I) : 0.14100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 0.1150 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.14 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.7 REMARK 200 DATA REDUNDANCY IN SHELL : 4.60 REMARK 200 R MERGE FOR SHELL (I) : 0.55200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.022 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 5ZXG REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.68 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.40 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M SODIUM CITRTE, 0.22 M AMMONIUM REMARK 280 SULFATE, 30% (W/V) PEG 4000, PH 5.6, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 91.09900 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 91.09900 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 23.50000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 57.84400 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 23.50000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 57.84400 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 91.09900 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 23.50000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 57.84400 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 91.09900 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 23.50000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 57.84400 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -20 REMARK 465 GLY A -19 REMARK 465 SER A -18 REMARK 465 SER A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 SER A -10 REMARK 465 SER A -9 REMARK 465 GLY A -8 REMARK 465 LEU A -7 REMARK 465 VAL A -6 REMARK 465 PRO A -5 REMARK 465 ARG A -4 REMARK 465 GLY A -3 REMARK 465 SER A -2 REMARK 465 HIS A -1 REMARK 465 MET A 0 REMARK 465 VAL A 1 REMARK 465 THR A 2 REMARK 465 ALA A 3 REMARK 465 GLY A 398 REMARK 465 ASP A 399 REMARK 465 ALA A 443 REMARK 465 ALA A 444 REMARK 465 SER A 445 REMARK 465 PRO A 446 REMARK 465 GLY A 447 REMARK 465 SER A 448 REMARK 465 SER A 449 REMARK 465 ALA A 450 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 180 NE - CZ - NH2 ANGL. DEV. = -3.0 DEGREES REMARK 500 ARG A 395 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 21 119.17 -172.80 REMARK 500 VAL A 32 151.76 -49.55 REMARK 500 ASP A 82 65.55 -102.08 REMARK 500 ASP A 85 101.49 -171.47 REMARK 500 VAL A 118 78.99 -114.43 REMARK 500 GLU A 136 -130.88 39.17 REMARK 500 LEU A 169 77.60 -115.30 REMARK 500 VAL A 202 58.34 31.52 REMARK 500 ILE A 206 -134.48 -121.80 REMARK 500 GLU A 231 111.59 -164.82 REMARK 500 ARG A 233 -144.02 -118.56 REMARK 500 THR A 243 -87.85 -114.57 REMARK 500 ASP A 341 119.17 -18.88 REMARK 500 ASP A 428 -78.68 -50.82 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 HIS A 155 PRO A 156 32.99 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 720 DISTANCE = 5.92 ANGSTROMS REMARK 525 HOH A 721 DISTANCE = 6.50 ANGSTROMS REMARK 525 HOH A 722 DISTANCE = 7.42 ANGSTROMS DBREF 6A0L A 2 450 UNP D2YYE1 D2YYE1_ARTGO 2 450 SEQADV 6A0L MET A -20 UNP D2YYE1 EXPRESSION TAG SEQADV 6A0L GLY A -19 UNP D2YYE1 EXPRESSION TAG SEQADV 6A0L SER A -18 UNP D2YYE1 EXPRESSION TAG SEQADV 6A0L SER A -17 UNP D2YYE1 EXPRESSION TAG SEQADV 6A0L HIS A -16 UNP D2YYE1 EXPRESSION TAG SEQADV 6A0L HIS A -15 UNP D2YYE1 EXPRESSION TAG SEQADV 6A0L HIS A -14 UNP D2YYE1 EXPRESSION TAG SEQADV 6A0L HIS A -13 UNP D2YYE1 EXPRESSION TAG SEQADV 6A0L HIS A -12 UNP D2YYE1 EXPRESSION TAG SEQADV 6A0L HIS A -11 UNP D2YYE1 EXPRESSION TAG SEQADV 6A0L SER A -10 UNP D2YYE1 EXPRESSION TAG SEQADV 6A0L SER A -9 UNP D2YYE1 EXPRESSION TAG SEQADV 6A0L GLY A -8 UNP D2YYE1 EXPRESSION TAG SEQADV 6A0L LEU A -7 UNP D2YYE1 EXPRESSION TAG SEQADV 6A0L VAL A -6 UNP D2YYE1 EXPRESSION TAG SEQADV 6A0L PRO A -5 UNP D2YYE1 EXPRESSION TAG SEQADV 6A0L ARG A -4 UNP D2YYE1 EXPRESSION TAG SEQADV 6A0L GLY A -3 UNP D2YYE1 EXPRESSION TAG SEQADV 6A0L SER A -2 UNP D2YYE1 EXPRESSION TAG SEQADV 6A0L HIS A -1 UNP D2YYE1 EXPRESSION TAG SEQADV 6A0L MET A 0 UNP D2YYE1 EXPRESSION TAG SEQADV 6A0L VAL A 1 UNP D2YYE1 EXPRESSION TAG SEQRES 1 A 471 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 471 LEU VAL PRO ARG GLY SER HIS MET VAL THR ALA PRO ASP SEQRES 3 A 471 TRP LEU ALA ASP ALA VAL PHE TYR GLN ILE PHE PRO GLU SEQRES 4 A 471 ARG PHE ALA ASN ALA ASP PRO SER LEU ASP PRO GLN ASN SEQRES 5 A 471 VAL VAL PRO TRP GLY SER THR PRO THR PRO ASP ASN PHE SEQRES 6 A 471 PHE GLY GLY ASP LEU GLN GLY ILE ILE ASP HIS LEU ASP SEQRES 7 A 471 HIS ILE VAL ALA LEU GLY ALA ASN ALA LEU TYR LEU THR SEQRES 8 A 471 PRO ILE PHE GLU ALA ASP THR ASN HIS ARG TYR ASP ALA SEQRES 9 A 471 LYS ASP TYR PHE SER ILE ASP HIS ARG LEU GLY THR LEU SEQRES 10 A 471 GLU THR PHE HIS ALA LEU MET ALA GLU CYS ARG ALA ARG SEQRES 11 A 471 GLY ILE ARG ILE VAL LEU ASP ALA VAL LEU ASN HIS CYS SEQRES 12 A 471 GLY ASP GLY HIS TRP ALA PHE ALA ASP VAL VAL GLU ASN SEQRES 13 A 471 GLU ALA ASP SER ALA TYR VAL ASN TRP PHE SER VAL GLU SEQRES 14 A 471 GLY PHE PRO VAL THR ALA HIS PRO THR PRO ASN TYR ARG SEQRES 15 A 471 THR CYS SER GLY CYS TYR TYR LEU PRO LYS TRP ASN ALA SEQRES 16 A 471 TYR ASN PRO GLU VAL ARG HIS HIS HIS LEU ASP VAL ALA SEQRES 17 A 471 ARG TYR TRP ILE ASP GLN GLY ILE ASP GLY TRP ARG LEU SEQRES 18 A 471 ASP VAL PRO TYR PHE ILE ASN HIS THR PHE TRP ARG GLU SEQRES 19 A 471 PHE ARG THR ALA VAL LYS GLY LYS SER GLU ASP LEU TYR SEQRES 20 A 471 ILE VAL ALA GLU GLU TRP ARG SER PRO VAL GLU TRP LEU SEQRES 21 A 471 GLN GLY ASP THR ALA ASP GLY THR MET ASN TYR THR ALA SEQRES 22 A 471 ARG ASP LEU ILE LEU GLY PHE THR ALA ASP GLY GLY ILE SEQRES 23 A 471 ASP ALA SER ALA LEU ALA ALA GLY LEU ASN ALA LEU HIS SEQRES 24 A 471 ALA GLU ILE PRO ALA GLY PHE HIS ARG GLY MET LEU ASN SEQRES 25 A 471 LEU LEU GLY SER HIS ASP THR GLU ARG VAL LEU THR ARG SEQRES 26 A 471 HIS ALA GLY ASP VAL GLU ALA ALA LEU LEU SER TYR ALA SEQRES 27 A 471 LEU LEU PHE SER LEU GLU GLY ALA PRO MET VAL TYR TYR SEQRES 28 A 471 GLY ASP GLU VAL GLY LEU THR GLY ASP ASN ASP PRO GLY SEQRES 29 A 471 CYS ARG GLY ALA MET PRO TRP ASN GLU GLU SER TRP ASN SEQRES 30 A 471 THR ARG LEU LEU ASP GLY ILE ARG THR PHE ALA ALA PHE SEQRES 31 A 471 ARG ALA HIS GLN PRO ALA MET ARG ARG GLY ARG GLN THR SEQRES 32 A 471 ALA VAL ALA LEU ASP ALA ASP THR ILE ALA ILE VAL ARG SEQRES 33 A 471 SER GLY GLY ASP GLU ARG ALA ALA VAL ILE VAL HIS ARG SEQRES 34 A 471 GLY GLU GLY THR THR VAL ASP THR ALA SER ILE PRO GLU SEQRES 35 A 471 LEU ALA PRO LEU ASP ALA ASP THR VAL VAL LEU GLY PRO SEQRES 36 A 471 LEU GLY THR ALA SER LEU ALA THR ALA ALA SER PRO GLY SEQRES 37 A 471 SER SER ALA HET GLC B 1 12 HET GLC B 2 11 HETNAM GLC ALPHA-D-GLUCOPYRANOSE HETSYN GLC ALPHA-D-GLUCOSE; D-GLUCOSE; GLUCOSE FORMUL 2 GLC 2(C6 H12 O6) FORMUL 3 HOH *122(H2 O) HELIX 1 AA1 PRO A 4 ALA A 10 5 7 HELIX 2 AA2 PHE A 16 PHE A 20 5 5 HELIX 3 AA3 ASP A 48 HIS A 55 1 8 HELIX 4 AA4 HIS A 55 GLY A 63 1 9 HELIX 5 AA5 THR A 95 ARG A 109 1 15 HELIX 6 AA6 HIS A 126 GLU A 136 1 11 HELIX 7 AA7 ALA A 137 SER A 139 5 3 HELIX 8 AA8 TYR A 141 PHE A 145 5 5 HELIX 9 AA9 THR A 162 CYS A 166 5 5 HELIX 10 AB1 ASN A 176 ASP A 192 1 17 HELIX 11 AB2 VAL A 202 ILE A 206 5 5 HELIX 12 AB3 ASN A 207 GLY A 220 1 14 HELIX 13 AB4 PRO A 235 GLN A 240 5 6 HELIX 14 AB5 ASN A 249 ALA A 261 1 13 HELIX 15 AB6 ASP A 266 ILE A 281 1 16 HELIX 16 AB7 ARG A 300 HIS A 305 1 6 HELIX 17 AB8 ASP A 308 LEU A 322 1 15 HELIX 18 AB9 ASN A 356 GLN A 373 1 18 HELIX 19 AC1 GLN A 373 GLY A 379 1 7 HELIX 20 AC2 ALA A 417 ILE A 419 5 3 SHEET 1 AA1 8 GLY A 246 THR A 247 0 SHEET 2 AA1 8 TYR A 226 ALA A 229 1 N ALA A 229 O GLY A 246 SHEET 3 AA1 8 GLY A 197 LEU A 200 1 N TRP A 198 O TYR A 226 SHEET 4 AA1 8 ARG A 112 ALA A 117 1 N ALA A 117 O ARG A 199 SHEET 5 AA1 8 ALA A 66 LEU A 69 1 N LEU A 69 O VAL A 114 SHEET 6 AA1 8 PHE A 12 ILE A 15 1 N TYR A 13 O ALA A 66 SHEET 7 AA1 8 ALA A 325 TYR A 329 1 O VAL A 328 N GLN A 14 SHEET 8 AA1 8 LEU A 290 ASN A 291 1 N ASN A 291 O MET A 327 SHEET 1 AA2 2 PHE A 73 ALA A 75 0 SHEET 2 AA2 2 ALA A 83 ILE A 89 -1 O LYS A 84 N GLU A 74 SHEET 1 AA3 4 ARG A 380 ASP A 387 0 SHEET 2 AA3 4 THR A 390 SER A 396 -1 O ALA A 392 N VAL A 384 SHEET 3 AA3 4 ARG A 401 HIS A 407 -1 O ALA A 402 N ARG A 395 SHEET 4 AA3 4 THR A 437 THR A 442 -1 O LEU A 440 N ALA A 403 SHEET 1 AA4 2 THR A 412 ASP A 415 0 SHEET 2 AA4 2 THR A 429 LEU A 432 -1 O LEU A 432 N THR A 412 LINK O4 GLC B 1 C1 GLC B 2 1555 1555 1.43 CISPEP 1 PHE A 150 PRO A 151 0 -2.97 CISPEP 2 ASP A 341 PRO A 342 0 11.24 CRYST1 47.000 115.688 182.198 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021277 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008644 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005489 0.00000