HEADER TRANSFERASE 07-JUN-18 6A1C TITLE CRYSTAL STRUCTURE OF THE CK2A1-GO289 COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: CASEIN KINASE II SUBUNIT ALPHA; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: CK II ALPHA; COMPND 5 EC: 2.7.11.1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CSNK2A1, CK2A1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS CK2A1, INHIBITOR, COMPLEX, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR T.KINOSHITA,M.TSUYUGUCHI REVDAT 2 22-NOV-23 6A1C 1 REMARK REVDAT 1 06-MAR-19 6A1C 0 JRNL AUTH T.OSHIMA,Y.NIWA,K.KUWATA,A.SRIVASTAVA,T.HYODA,Y.TSUCHIYA, JRNL AUTH 2 M.KUMAGAI,M.TSUYUGUCHI,T.TAMARU,A.SUGIYAMA,N.ONO,N.ZOLBOOT, JRNL AUTH 3 Y.AIKAWA,S.OISHI,A.NONAMI,F.ARAI,S.HAGIHARA,J.YAMAGUCHI, JRNL AUTH 4 F.TAMA,Y.KUNISAKI,K.YAGITA,M.IKEDA,T.KINOSHITA,S.A.KAY, JRNL AUTH 5 K.ITAMI,T.HIROTA JRNL TITL CELL-BASED SCREEN IDENTIFIES A NEW POTENT AND HIGHLY JRNL TITL 2 SELECTIVE CK2 INHIBITOR FOR MODULATION OF CIRCADIAN RHYTHMS JRNL TITL 3 AND CANCER CELL GROWTH. JRNL REF SCI ADV V. 5 U9060 2019 JRNL REFN ESSN 2375-2548 JRNL PMID 30746467 JRNL DOI 10.1126/SCIADV.AAU9060 REMARK 2 REMARK 2 RESOLUTION. 1.68 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0069 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.68 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 55.94 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 35376 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.140 REMARK 3 R VALUE (WORKING SET) : 0.138 REMARK 3 FREE R VALUE : 0.196 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 1839 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.68 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.73 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2463 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 95.29 REMARK 3 BIN R VALUE (WORKING SET) : 0.1420 REMARK 3 BIN FREE R VALUE SET COUNT : 149 REMARK 3 BIN FREE R VALUE : 0.2240 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2817 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 130 REMARK 3 SOLVENT ATOMS : 186 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 23.41 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.63000 REMARK 3 B22 (A**2) : -1.37000 REMARK 3 B33 (A**2) : 2.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.156 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.100 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.066 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.409 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.966 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.951 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3001 ; 0.018 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2875 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4006 ; 1.921 ; 1.970 REMARK 3 BOND ANGLES OTHERS (DEGREES): 6582 ; 0.924 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 335 ; 5.601 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 157 ;33.065 ;23.057 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 515 ;12.923 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 26 ;22.437 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 406 ; 0.121 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3278 ; 0.010 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 732 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1337 ; 2.051 ; 1.062 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1336 ; 2.052 ; 1.062 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1670 ; 2.439 ; 1.599 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1671 ; 2.438 ; 1.599 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1664 ; 3.316 ; 1.545 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1664 ; 3.296 ; 1.545 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2336 ; 3.559 ; 2.140 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 3583 ; 3.881 ;10.887 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 3576 ; 3.856 ;10.833 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 5876 ; 6.203 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 85 ;26.536 ; 5.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 5926 ; 9.162 ; 5.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2 A 335 REMARK 3 ORIGIN FOR THE GROUP (A): 11.6302 10.5032 17.8378 REMARK 3 T TENSOR REMARK 3 T11: 0.0095 T22: 0.0259 REMARK 3 T33: 0.0144 T12: 0.0062 REMARK 3 T13: 0.0031 T23: 0.0059 REMARK 3 L TENSOR REMARK 3 L11: 1.8321 L22: 1.1628 REMARK 3 L33: 0.7048 L12: 0.3561 REMARK 3 L13: -0.4668 L23: -0.1739 REMARK 3 S TENSOR REMARK 3 S11: 0.0454 S12: 0.0111 S13: 0.1466 REMARK 3 S21: -0.0252 S22: 0.0135 S23: 0.0703 REMARK 3 S31: -0.0213 S32: -0.0486 S33: -0.0589 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 6A1C COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 11-JUN-18. REMARK 100 THE DEPOSITION ID IS D_1300008001. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-APR-15 REMARK 200 TEMPERATURE (KELVIN) : 95 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL44XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX300HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 37267 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.680 REMARK 200 RESOLUTION RANGE LOW (A) : 55.950 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 7.300 REMARK 200 R MERGE (I) : 0.05600 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 30.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.68 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.71 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.3 REMARK 200 DATA REDUNDANCY IN SHELL : 7.10 REMARK 200 R MERGE FOR SHELL (I) : 0.46200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 5.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 3WAR REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 38.41 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.00 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: ETHYLENEGLYCOL, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 25.82850 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 39.70150 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 39.41550 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 39.70150 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 25.82850 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 39.41550 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5630 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15540 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 74.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -4 REMARK 465 PRO A -3 REMARK 465 LEU A -2 REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O2 EDO A 426 O2 EDO A 427 1.92 REMARK 500 OG1 THR A 326 O HOH A 501 1.97 REMARK 500 O HOH A 514 O HOH A 615 2.12 REMARK 500 O1 EDO A 426 O1 EDO A 427 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 80 NE - CZ - NH1 ANGL. DEV. = -3.0 DEGREES REMARK 500 ARG A 195 NE - CZ - NH2 ANGL. DEV. = 3.0 DEGREES REMARK 500 ARG A 228 NE - CZ - NH2 ANGL. DEV. = 3.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 107 19.14 58.04 REMARK 500 ASP A 156 46.11 -151.37 REMARK 500 ASP A 175 78.95 50.31 REMARK 500 ALA A 193 154.12 69.90 REMARK 500 MET A 208 55.83 -92.13 REMARK 500 HIS A 234 79.39 -106.25 REMARK 500 ASP A 266 135.38 -33.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 686 DISTANCE = 7.21 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 402 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLN A 36 O REMARK 620 2 GLN A 36 OE1 78.2 REMARK 620 3 TYR A 39 O 88.6 163.8 REMARK 620 4 EDO A 403 O1 94.0 95.2 94.9 REMARK 620 5 EDO A 404 O2 103.7 85.6 88.6 162.1 REMARK 620 6 HOH A 546 O 171.1 96.4 97.8 79.4 82.8 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 9NX A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 407 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 408 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 409 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 410 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 411 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 412 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 413 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 414 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 415 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 416 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 417 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 418 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 419 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 420 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 421 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 422 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 423 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 424 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 425 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 426 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 427 REMARK 800 REMARK 800 SITE_IDENTIFIER: AF1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 428 DBREF 6A1C A 1 335 UNP P68400 CSK21_HUMAN 1 335 SEQADV 6A1C GLY A -4 UNP P68400 EXPRESSION TAG SEQADV 6A1C PRO A -3 UNP P68400 EXPRESSION TAG SEQADV 6A1C LEU A -2 UNP P68400 EXPRESSION TAG SEQADV 6A1C GLY A -1 UNP P68400 EXPRESSION TAG SEQADV 6A1C SER A 0 UNP P68400 EXPRESSION TAG SEQRES 1 A 340 GLY PRO LEU GLY SER MET SER GLY PRO VAL PRO SER ARG SEQRES 2 A 340 ALA ARG VAL TYR THR ASP VAL ASN THR HIS ARG PRO ARG SEQRES 3 A 340 GLU TYR TRP ASP TYR GLU SER HIS VAL VAL GLU TRP GLY SEQRES 4 A 340 ASN GLN ASP ASP TYR GLN LEU VAL ARG LYS LEU GLY ARG SEQRES 5 A 340 GLY LYS TYR SER GLU VAL PHE GLU ALA ILE ASN ILE THR SEQRES 6 A 340 ASN ASN GLU LYS VAL VAL VAL LYS ILE LEU LYS PRO VAL SEQRES 7 A 340 LYS LYS LYS LYS ILE LYS ARG GLU ILE LYS ILE LEU GLU SEQRES 8 A 340 ASN LEU ARG GLY GLY PRO ASN ILE ILE THR LEU ALA ASP SEQRES 9 A 340 ILE VAL LYS ASP PRO VAL SER ARG THR PRO ALA LEU VAL SEQRES 10 A 340 PHE GLU HIS VAL ASN ASN THR ASP PHE LYS GLN LEU TYR SEQRES 11 A 340 GLN THR LEU THR ASP TYR ASP ILE ARG PHE TYR MET TYR SEQRES 12 A 340 GLU ILE LEU LYS ALA LEU ASP TYR CYS HIS SER MET GLY SEQRES 13 A 340 ILE MET HIS ARG ASP VAL LYS PRO HIS ASN VAL MET ILE SEQRES 14 A 340 ASP HIS GLU HIS ARG LYS LEU ARG LEU ILE ASP TRP GLY SEQRES 15 A 340 LEU ALA GLU PHE TYR HIS PRO GLY GLN GLU TYR ASN VAL SEQRES 16 A 340 ARG VAL ALA SER ARG TYR PHE LYS GLY PRO GLU LEU LEU SEQRES 17 A 340 VAL ASP TYR GLN MET TYR ASP TYR SER LEU ASP MET TRP SEQRES 18 A 340 SER LEU GLY CYS MET LEU ALA SER MET ILE PHE ARG LYS SEQRES 19 A 340 GLU PRO PHE PHE HIS GLY HIS ASP ASN TYR ASP GLN LEU SEQRES 20 A 340 VAL ARG ILE ALA LYS VAL LEU GLY THR GLU ASP LEU TYR SEQRES 21 A 340 ASP TYR ILE ASP LYS TYR ASN ILE GLU LEU ASP PRO ARG SEQRES 22 A 340 PHE ASN ASP ILE LEU GLY ARG HIS SER ARG LYS ARG TRP SEQRES 23 A 340 GLU ARG PHE VAL HIS SER GLU ASN GLN HIS LEU VAL SER SEQRES 24 A 340 PRO GLU ALA LEU ASP PHE LEU ASP LYS LEU LEU ARG TYR SEQRES 25 A 340 ASP HIS GLN SER ARG LEU THR ALA ARG GLU ALA MET GLU SEQRES 26 A 340 HIS PRO TYR PHE TYR THR VAL VAL LYS ASP GLN ALA ARG SEQRES 27 A 340 MET GLY HET 9NX A 401 25 HET NA A 402 1 HET EDO A 403 4 HET EDO A 404 4 HET EDO A 405 4 HET EDO A 406 4 HET EDO A 407 4 HET EDO A 408 4 HET EDO A 409 4 HET EDO A 410 4 HET EDO A 411 4 HET EDO A 412 4 HET EDO A 413 4 HET EDO A 414 4 HET EDO A 415 4 HET EDO A 416 4 HET EDO A 417 4 HET EDO A 418 4 HET EDO A 419 4 HET EDO A 420 4 HET EDO A 421 4 HET EDO A 422 4 HET EDO A 423 4 HET EDO A 424 4 HET EDO A 425 4 HET EDO A 426 4 HET EDO A 427 4 HET EDO A 428 4 HETNAM 9NX 5-BROMANYL-2-METHOXY-4-[(E)-(3-METHYLSULFANYL-5-PHENYL- HETNAM 2 9NX 1,2,4-TRIAZOL-4-YL)IMINOMETHYL]PHENOL HETNAM NA SODIUM ION HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 2 9NX C17 H15 BR N4 O2 S FORMUL 3 NA NA 1+ FORMUL 4 EDO 26(C2 H6 O2) FORMUL 30 HOH *186(H2 O) HELIX 1 AA1 PRO A 20 ASP A 25 1 6 HELIX 2 AA2 TYR A 26 HIS A 29 5 4 HELIX 3 AA3 ASN A 35 ASP A 37 5 3 HELIX 4 AA4 LYS A 74 ARG A 89 1 16 HELIX 5 AA5 ASP A 120 LEU A 128 1 9 HELIX 6 AA6 THR A 129 MET A 150 1 22 HELIX 7 AA7 LYS A 158 HIS A 160 5 3 HELIX 8 AA8 HIS A 166 ARG A 169 5 4 HELIX 9 AA9 SER A 194 LYS A 198 5 5 HELIX 10 AB1 GLY A 199 VAL A 204 1 6 HELIX 11 AB2 TYR A 211 ARG A 228 1 18 HELIX 12 AB3 ASP A 237 GLY A 250 1 14 HELIX 13 AB4 GLY A 250 TYR A 261 1 12 HELIX 14 AB5 ASP A 266 GLY A 274 1 9 HELIX 15 AB6 ARG A 280 VAL A 285 5 6 HELIX 16 AB7 ASN A 289 VAL A 293 5 5 HELIX 17 AB8 SER A 294 LEU A 305 1 12 HELIX 18 AB9 ASP A 308 ARG A 312 5 5 HELIX 19 AC1 THR A 314 GLU A 320 1 7 HELIX 20 AC2 HIS A 321 TYR A 323 5 3 HELIX 21 AC3 PHE A 324 ALA A 332 1 9 SHEET 1 AA1 5 TYR A 39 ARG A 47 0 SHEET 2 AA1 5 SER A 51 ASN A 58 -1 O GLU A 55 N VAL A 42 SHEET 3 AA1 5 LYS A 64 LEU A 70 -1 O ILE A 69 N GLU A 52 SHEET 4 AA1 5 PRO A 109 GLU A 114 -1 O PHE A 113 N VAL A 66 SHEET 5 AA1 5 LEU A 97 LYS A 102 -1 N VAL A 101 O ALA A 110 SHEET 1 AA2 2 ILE A 152 MET A 153 0 SHEET 2 AA2 2 GLU A 180 PHE A 181 -1 O GLU A 180 N MET A 153 SHEET 1 AA3 2 VAL A 162 ASP A 165 0 SHEET 2 AA3 2 LYS A 170 LEU A 173 -1 O LYS A 170 N ASP A 165 LINK O GLN A 36 NA NA A 402 1555 1555 2.41 LINK OE1 GLN A 36 NA NA A 402 1555 1555 2.37 LINK O TYR A 39 NA NA A 402 1555 1555 2.32 LINK NA NA A 402 O1 EDO A 403 1555 1555 2.34 LINK NA NA A 402 O2 EDO A 404 1555 1555 2.42 LINK NA NA A 402 O HOH A 546 1555 1455 2.50 CISPEP 1 GLU A 230 PRO A 231 0 -4.85 SITE 1 AC1 12 VAL A 66 LYS A 68 PHE A 113 VAL A 116 SITE 2 AC1 12 HIS A 160 MET A 163 ILE A 174 ASP A 175 SITE 3 AC1 12 EDO A 419 EDO A 420 EDO A 425 HOH A 511 SITE 1 AC2 5 GLN A 36 TYR A 39 EDO A 403 EDO A 404 SITE 2 AC2 5 HOH A 546 SITE 1 AC3 7 GLN A 36 TYR A 39 ILE A 69 ASP A 103 SITE 2 AC3 7 NA A 402 EDO A 406 HOH A 546 SITE 1 AC4 7 GLN A 36 ASP A 37 TYR A 39 ILE A 59 SITE 2 AC4 7 NA A 402 EDO A 405 HOH A 513 SITE 1 AC5 6 GLN A 36 ASP A 37 GLU A 320 EDO A 404 SITE 2 AC5 6 HOH A 633 HOH A 680 SITE 1 AC6 5 LEU A 41 ASP A 103 VAL A 105 EDO A 403 SITE 2 AC6 5 HOH A 546 SITE 1 AC7 6 GLY A 90 GLY A 91 PRO A 92 ASN A 93 SITE 2 AC7 6 ILE A 94 HOH A 502 SITE 1 AC8 5 PHE A 232 HOH A 504 HOH A 509 HOH A 554 SITE 2 AC8 5 HOH A 572 SITE 1 AC9 4 TYR A 50 LYS A 77 GLU A 81 HOH A 518 SITE 1 AD1 7 ASN A 118 PRO A 159 VAL A 162 MET A 163 SITE 2 AD1 7 ILE A 164 EDO A 418 EDO A 419 SITE 1 AD2 7 ASN A 117 THR A 119 ASP A 165 HIS A 166 SITE 2 AD2 7 GLU A 167 HOH A 583 HOH A 617 SITE 1 AD3 7 PRO A 4 GLU A 187 ASP A 205 TYR A 206 SITE 2 AD3 7 GLN A 207 MET A 208 HOH A 519 SITE 1 AD4 7 GLY A 34 ASN A 35 GLN A 36 VAL A 101 SITE 2 AD4 7 LYS A 102 HOH A 506 HOH A 560 SITE 1 AD5 7 ASN A 93 GLU A 139 ARG A 169 LYS A 170 SITE 2 AD5 7 LEU A 171 ARG A 172 EDO A 415 SITE 1 AD6 5 PRO A 92 ASN A 93 GLU A 139 LYS A 142 SITE 2 AD6 5 EDO A 414 SITE 1 AD7 6 TRP A 33 TYR A 125 ARG A 228 LYS A 229 SITE 2 AD7 6 GLU A 230 HOH A 599 SITE 1 AD8 5 GLY A 34 ASP A 99 HIS A 234 HIS A 236 SITE 2 AD8 5 HOH A 567 SITE 1 AD9 4 PRO A 159 VAL A 162 MET A 221 EDO A 410 SITE 1 AE1 6 PRO A 159 HIS A 160 VAL A 162 MET A 163 SITE 2 AE1 6 9NX A 401 EDO A 410 SITE 1 AE2 6 GLY A 48 LYS A 49 TYR A 50 SER A 51 SITE 2 AE2 6 9NX A 401 HOH A 576 SITE 1 AE3 4 ASP A 156 LYS A 158 SER A 194 EDO A 423 SITE 1 AE4 2 SER A 194 ARG A 195 SITE 1 AE5 4 ARG A 191 ALA A 193 LYS A 198 EDO A 421 SITE 1 AE6 6 VAL A 248 LEU A 249 ARG A 278 LYS A 279 SITE 2 AE6 6 TRP A 281 HOH A 516 SITE 1 AE7 5 GLU A 55 HIS A 115 VAL A 116 ASN A 118 SITE 2 AE7 5 9NX A 401 SITE 1 AE8 4 LYS A 44 PHE A 54 EDO A 427 HOH A 585 SITE 1 AE9 5 PRO A 295 GLU A 296 ASP A 299 HIS A 321 SITE 2 AE9 5 EDO A 426 SITE 1 AF1 3 LEU A 203 ASN A 238 ASP A 256 CRYST1 51.657 78.831 79.403 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019358 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012685 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012594 0.00000