HEADER PHOTOSYNTHESIS 13-JUN-18 6A2W TITLE CRYSTAL STRUCTURE OF FUCOXANTHIN CHLOROPHYLL A/C COMPLEX FROM TITLE 2 PHAEODACTYLUM TRICORNUTUM COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN FUCOXANTHIN CHLOROPHYL A/C PROTEIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PROTEIN FUCOXANTHIN CHLOROPHYLL A/C PROTEIN SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PHAEODACTYLUM TRICORNUTUM CCAP 1055/1; SOURCE 3 ORGANISM_TAXID: 556484; SOURCE 4 STRAIN: CCAP 1055/1 KEYWDS PHOTOSYNTHESIS, LIGHT-HARVESTING, FUCOXANTHIN, DIATOM EXPDTA X-RAY DIFFRACTION AUTHOR W.WANG,L.J.YU,T.Y.KUANG,J.R.SHEN REVDAT 5 27-MAR-24 6A2W 1 HETSYN FORMUL REVDAT 4 29-JUL-20 6A2W 1 COMPND REMARK HETNAM LINK REVDAT 4 2 1 SITE REVDAT 3 27-FEB-19 6A2W 1 JRNL REVDAT 2 20-FEB-19 6A2W 1 REMARK LINK SITE ATOM REVDAT 1 06-FEB-19 6A2W 0 JRNL AUTH W.WANG,L.J.YU,C.XU,T.TOMIZAKI,S.ZHAO,Y.UMENA,X.CHEN,X.QIN, JRNL AUTH 2 Y.XIN,M.SUGA,G.HAN,T.KUANG,J.R.SHEN JRNL TITL STRUCTURAL BASIS FOR BLUE-GREEN LIGHT HARVESTING AND ENERGY JRNL TITL 2 DISSIPATION IN DIATOMS. JRNL REF SCIENCE V. 363 2019 JRNL REFN ESSN 1095-9203 JRNL PMID 30733387 JRNL DOI 10.1126/SCIENCE.AAV0365 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.14_3260 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.98 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 67.0 REMARK 3 NUMBER OF REFLECTIONS : 24631 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.175 REMARK 3 FREE R VALUE : 0.197 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 7.550 REMARK 3 FREE R VALUE TEST SET COUNT : 1860 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 19.9846 - 4.2202 1.00 2758 225 0.1846 0.2015 REMARK 3 2 4.2202 - 3.3548 1.00 2664 218 0.1452 0.1620 REMARK 3 3 3.3548 - 2.9323 1.00 2626 214 0.1697 0.2114 REMARK 3 4 2.9323 - 2.6648 0.93 2409 197 0.1777 0.1872 REMARK 3 5 2.6648 - 2.4742 0.80 2093 171 0.1812 0.1911 REMARK 3 6 2.4742 - 2.3286 0.72 1858 151 0.1791 0.2037 REMARK 3 7 2.3286 - 2.2121 0.64 1660 136 0.1814 0.2294 REMARK 3 8 2.2121 - 2.1159 0.56 1456 119 0.1747 0.2004 REMARK 3 9 2.1159 - 2.0345 0.51 1303 107 0.1852 0.2715 REMARK 3 10 2.0345 - 1.9644 0.46 1167 95 0.1955 0.2252 REMARK 3 11 1.9644 - 1.9030 0.41 1041 85 0.1995 0.2507 REMARK 3 12 1.9030 - 1.8487 0.36 924 76 0.2060 0.2336 REMARK 3 13 1.8487 - 1.8000 0.31 812 66 0.1986 0.2578 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.160 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.030 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 28.79 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 43.66 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): -21.4942 -2.4241 17.2439 REMARK 3 T TENSOR REMARK 3 T11: 0.2265 T22: 0.1172 REMARK 3 T33: 0.1447 T12: 0.0265 REMARK 3 T13: -0.0026 T23: -0.0717 REMARK 3 L TENSOR REMARK 3 L11: 2.2195 L22: 1.2048 REMARK 3 L33: 4.0586 L12: 0.3234 REMARK 3 L13: 0.3617 L23: -0.2395 REMARK 3 S TENSOR REMARK 3 S11: 0.0816 S12: 0.1258 S13: -0.0825 REMARK 3 S21: 0.0298 S22: -0.0035 S23: -0.0005 REMARK 3 S31: 0.3406 S32: 0.1025 S33: -0.0056 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6A2W COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 06-AUG-18. REMARK 100 THE DEPOSITION ID IS D_1300008075. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-SEP-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL41XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 36704 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 19.983 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 67.0 REMARK 200 DATA REDUNDANCY : 2.000 REMARK 200 R MERGE (I) : 0.02486 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.5500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.86 REMARK 200 COMPLETENESS FOR SHELL (%) : 31.9 REMARK 200 DATA REDUNDANCY IN SHELL : 2.00 REMARK 200 R MERGE FOR SHELL (I) : 0.75510 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.950 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: CRANK2 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.68 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.05 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 1000, CALCIUM CHLORIDE, N-OCTAL-D REMARK 280 -THIOGLUCOSIDE, 4-MORPHOLINEETHANESULFONIC ACID HYDRATE, REMARK 280 MICROBATCH, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 70.63050 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 70.63050 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 23.87450 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 57.85900 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 23.87450 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 57.85900 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 70.63050 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 23.87450 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 57.85900 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 70.63050 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 23.87450 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 57.85900 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLN A 167 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASP A 105 O HOH A 501 2.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 102 -62.62 -133.29 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 577 DISTANCE = 5.82 ANGSTROMS REMARK 525 HOH A 578 DISTANCE = 5.91 ANGSTROMS REMARK 525 HOH A 579 DISTANCE = 6.66 ANGSTROMS REMARK 525 HOH A 580 DISTANCE = 7.92 ANGSTROMS REMARK 600 REMARK 600 HETEROGEN REMARK 600 REMARK 600 THERE ARE SOME CYLINDRICAL SHAPE ELECTRON DENSITIES AROUND THE REMARK 600 PIGMENT-PROTEIN COMPLEX, AND IT IS HARD TO CONFIRM WHETHER THEY ARE REMARK 600 DETERGENTS OR LIPID TAILS. THUS, THESE DENSITIES ARE ASSIGNED AS REMARK 600 UNL (UNKNOWN OBJECTS) TENTATIVELY. REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 CLA A 401 REMARK 610 CLA A 405 REMARK 610 CLA A 409 REMARK 610 LMT A 410 REMARK 610 DGD A 411 REMARK 610 LHG A 412 REMARK 610 SOG A 416 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CLA A 402 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 36 OE2 REMARK 620 2 CLA A 402 NA 86.1 REMARK 620 3 CLA A 402 NB 87.9 91.6 REMARK 620 4 CLA A 402 NC 96.2 176.8 90.7 REMARK 620 5 CLA A 402 ND 95.5 90.5 176.1 87.0 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CLA A 404 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLN A 53 OE1 REMARK 620 2 CLA A 404 NA 84.2 REMARK 620 3 CLA A 404 NB 98.0 91.6 REMARK 620 4 CLA A 404 NC 103.2 172.5 88.9 REMARK 620 5 CLA A 404 ND 90.9 90.8 171.0 87.7 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 201 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 72 O REMARK 620 2 GLU A 82 OE1 99.1 REMARK 620 3 GLU A 82 OE2 77.1 53.3 REMARK 620 4 HOH A 540 O 160.5 72.0 108.8 REMARK 620 5 HOH A 552 O 79.6 83.0 125.1 82.0 REMARK 620 6 HOH A 554 O 109.4 117.4 80.1 90.1 154.7 REMARK 620 7 HOH A 562 O 89.6 160.7 145.9 94.3 81.7 74.9 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 202 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 72 OE2 REMARK 620 2 GLY A 119 O 73.2 REMARK 620 3 HOH A 503 O 66.3 63.4 REMARK 620 4 HOH A 531 O 80.5 15.1 78.4 REMARK 620 5 HOH A 571 O 122.4 126.3 167.3 111.2 REMARK 620 6 HOH A 572 O 138.0 119.1 83.3 122.3 84.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CLA A 405 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLN A 90 OE1 REMARK 620 2 CLA A 405 NA 92.3 REMARK 620 3 CLA A 405 NB 96.2 91.9 REMARK 620 4 CLA A 405 NC 85.8 176.0 91.7 REMARK 620 5 CLA A 405 ND 83.8 89.8 178.2 86.5 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CLA A 406 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 99 OE2 REMARK 620 2 CLA A 406 NA 87.3 REMARK 620 3 CLA A 406 NB 95.2 90.4 REMARK 620 4 CLA A 406 NC 100.9 171.8 89.6 REMARK 620 5 CLA A 406 ND 93.6 92.4 170.9 86.5 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CLA A 407 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 140 OE2 REMARK 620 2 CLA A 407 NA 89.4 REMARK 620 3 CLA A 407 NB 97.5 90.3 REMARK 620 4 CLA A 407 NC 98.2 172.1 90.7 REMARK 620 5 CLA A 407 ND 90.0 91.8 172.3 86.2 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 KC1 A 408 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLN A 143 OE1 REMARK 620 2 KC1 A 408 NB 96.6 REMARK 620 3 KC1 A 408 ND 91.8 169.5 REMARK 620 4 KC1 A 408 NA 90.8 89.5 96.7 REMARK 620 5 KC1 A 408 NC 97.9 80.5 92.1 167.4 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CLA A 401 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 517 O REMARK 620 2 CLA A 401 NA 81.6 REMARK 620 3 CLA A 401 NB 92.8 90.1 REMARK 620 4 CLA A 401 NC 105.6 172.4 91.9 REMARK 620 5 CLA A 401 ND 93.5 92.1 173.6 85.2 REMARK 620 N 1 2 3 4 DBREF 6A2W A 1 167 UNP B7FRW2 B7FRW2_PHATC 32 198 SEQRES 1 A 167 ALA PHE GLU ASP GLU LEU GLY ALA GLN PRO PRO LEU GLY SEQRES 2 A 167 PHE PHE ASP PRO LEU GLY LEU VAL ALA ASP GLY ASP GLN SEQRES 3 A 167 GLU LYS PHE ASP ARG LEU ARG TYR VAL GLU ILE LYS HIS SEQRES 4 A 167 GLY ARG ILE SER MET LEU ALA VAL VAL GLY TYR LEU VAL SEQRES 5 A 167 GLN GLU ALA GLY VAL ARG LEU PRO GLY THR ILE ASP TYR SEQRES 6 A 167 SER GLY LYS THR PHE ALA GLU ILE PRO ASN GLY PHE ALA SEQRES 7 A 167 ALA PHE LYS GLU ILE PRO ALA GLY GLY LEU VAL GLN LEU SEQRES 8 A 167 LEU PHE PHE ILE GLY VAL LEU GLU SER SER VAL MET ARG SEQRES 9 A 167 ASP LEU THR GLY GLU ALA GLU PHE VAL GLY ASP PHE ARG SEQRES 10 A 167 ASN GLY ALA ILE ASP PHE GLY TRP ASP THR PHE ASP GLU SEQRES 11 A 167 GLU THR GLN PHE LYS LYS ARG ALA ILE GLU LEU ASN GLN SEQRES 12 A 167 GLY ARG ALA ALA GLN MET GLY ILE LEU ALA LEU MET VAL SEQRES 13 A 167 HIS GLU GLN LEU GLY VAL SER LEU LEU PRO GLN HET CA A 201 1 HET CA A 202 1 HET A86 A 301 48 HET A86 A 302 48 HET A86 A 303 48 HET A86 A 304 48 HET A86 A 305 48 HET A86 A 306 48 HET A86 A 307 48 HET DD6 A 308 43 HET CLA A 401 61 HET CLA A 402 65 HET KC2 A 403 45 HET CLA A 404 65 HET CLA A 405 46 HET CLA A 406 65 HET CLA A 407 65 HET KC1 A 408 45 HET CLA A 409 41 HET LMT A 410 31 HET DGD A 411 39 HET LHG A 412 33 HET SOG A 413 20 HET SOG A 414 20 HET SOG A 415 20 HET SOG A 416 15 HET UNL A 417 12 HET UNL A 418 12 HET UNL A 419 8 HET UNL A 420 12 HET UNL A 421 12 HET UNL A 422 7 HET UNL A 423 10 HETNAM CA CALCIUM ION HETNAM A86 (3S,3'S,5R,5'R,6S,6'R,8'R)-3,5'-DIHYDROXY-8-OXO-6',7'- HETNAM 2 A86 DIDEHYDRO-5,5',6,6',7,8-HEXAHYDRO-5,6-EPOXY-BETA,BETA- HETNAM 3 A86 CAROTEN-3'- YL ACETATE HETNAM DD6 (3S,3'R,5R,6S,7CIS)-7',8'-DIDEHYDRO-5,6-DIHYDRO-5,6- HETNAM 2 DD6 EPOXY-BETA,BETA-CAROTENE-3,3'-DIOL HETNAM CLA CHLOROPHYLL A HETNAM KC2 CHLOROPHYLL C2 HETNAM KC1 CHLOROPHYLL C1 HETNAM LMT DODECYL-BETA-D-MALTOSIDE HETNAM DGD DIGALACTOSYL DIACYL GLYCEROL (DGDG) HETNAM LHG 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE HETNAM SOG OCTYL 1-THIO-BETA-D-GLUCOPYRANOSIDE HETNAM UNL UNKNOWN LIGAND HETSYN A86 FUCOXANTHIN HETSYN DD6 DIADINOXANTHIN HETSYN SOG 2-HYDROXYMETHYL-6-OCTYLSULFANYL-TETRAHYDRO-PYRAN-3,4,5- HETSYN 2 SOG TRIOL; 1-S-OCTYL-BETA-D-THIOGLUCOSIDE; OCTYL 1-THIO- HETSYN 3 SOG BETA-D-GLUCOSIDE; OCTYL 1-THIO-D-GLUCOSIDE; OCTYL 1- HETSYN 4 SOG THIO-GLUCOSIDE FORMUL 2 CA 2(CA 2+) FORMUL 4 A86 7(C42 H58 O6) FORMUL 11 DD6 C40 H54 O3 FORMUL 12 CLA 7(C55 H72 MG N4 O5) FORMUL 14 KC2 C35 H28 MG N4 O5 FORMUL 19 KC1 C35 H30 MG N4 O5 FORMUL 21 LMT C24 H46 O11 FORMUL 22 DGD C51 H96 O15 FORMUL 23 LHG C38 H75 O10 P FORMUL 24 SOG 4(C14 H28 O5 S) FORMUL 35 HOH *80(H2 O) HELIX 1 AA1 ASP A 25 ALA A 55 1 31 HELIX 2 AA2 THR A 69 ILE A 73 5 5 HELIX 3 AA3 ASN A 75 GLU A 82 5 8 HELIX 4 AA4 PRO A 84 VAL A 102 1 19 HELIX 5 AA5 GLY A 124 PHE A 128 5 5 HELIX 6 AA6 ASP A 129 GLY A 161 1 33 LINK OE2 GLU A 36 MG CLA A 402 1555 1555 2.04 LINK OE1 GLN A 53 MG CLA A 404 1555 1555 2.15 LINK O GLU A 72 CA CA A 201 1555 1555 2.26 LINK OE2 GLU A 72 CA CA A 202 1555 1555 2.73 LINK OE1 GLU A 82 CA CA A 201 1555 1555 2.50 LINK OE2 GLU A 82 CA CA A 201 1555 1555 2.43 LINK OE1 GLN A 90 MG CLA A 405 1555 1555 2.21 LINK OE2 GLU A 99 MG CLA A 406 1555 1555 2.10 LINK O GLY A 119 CA CA A 202 1555 1655 2.46 LINK OE2 GLU A 140 MG CLA A 407 1555 1555 2.11 LINK OE1 GLN A 143 MG KC1 A 408 1555 1555 2.17 LINK CA CA A 201 O HOH A 540 1555 1555 2.43 LINK CA CA A 201 O HOH A 552 1555 1555 2.48 LINK CA CA A 201 O HOH A 554 1555 1555 2.32 LINK CA CA A 201 O HOH A 562 1555 1555 2.40 LINK CA CA A 202 O HOH A 503 1555 1555 2.27 LINK CA CA A 202 O HOH A 531 1555 1555 2.26 LINK CA CA A 202 O HOH A 571 1555 1555 2.76 LINK CA CA A 202 O HOH A 572 1555 1555 2.46 LINK MG CLA A 401 O HOH A 517 1555 1555 2.21 CISPEP 1 PRO A 10 PRO A 11 0 1.63 CRYST1 47.749 115.718 141.261 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020943 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008642 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007079 0.00000