HEADER SIGNALING PROTEIN 19-JUN-18 6A48 TITLE CRYSTAL STRUCTURE OF REELIN N-TERMINAL REGION COMPND MOL_ID: 1; COMPND 2 MOLECULE: REELIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: N-TERMINAL REGION; COMPND 5 SYNONYM: REELER PROTEIN; COMPND 6 EC: 3.4.21.-; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: RELN, RL; SOURCE 6 EXPRESSION_SYSTEM: CRICETULUS GRISEUS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 10029; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: CHO 3.2.8.1; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PCDNA3.1-HIS/MYC KEYWDS REELIN, EXTRACELLULAR PROTEIN, LDLR FAMILY, SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.NAGAE,J.TAKAGI REVDAT 4 22-NOV-23 6A48 1 REMARK REVDAT 3 29-JUN-22 6A48 1 JRNL HETSYN REVDAT 2 29-JUL-20 6A48 1 COMPND REMARK HETNAM LINK REVDAT 2 2 1 SITE REVDAT 1 19-JUN-19 6A48 0 JRNL AUTH M.NAGAE,K.SUZUKI,N.YASUI,T.NOGI,T.KOHNO,M.HATTORI,J.TAKAGI JRNL TITL STRUCTURAL STUDIES OF REELIN N-TERMINAL REGION PROVIDES JRNL TITL 2 INSIGHTS INTO A UNIQUE STRUCTURAL ARRANGEMENT AND FUNCTIONAL JRNL TITL 3 MULTIMERIZATION. JRNL REF J.BIOCHEM. V. 169 555 2021 JRNL REFN ISSN 0021-924X JRNL PMID 33377147 JRNL DOI 10.1093/JB/MVAA144 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10.1_2155: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.27 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.1 REMARK 3 NUMBER OF REFLECTIONS : 46572 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.217 REMARK 3 R VALUE (WORKING SET) : 0.215 REMARK 3 FREE R VALUE : 0.257 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.070 REMARK 3 FREE R VALUE TEST SET COUNT : 2363 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.2791 - 5.1402 1.00 2861 155 0.1942 0.2258 REMARK 3 2 5.1402 - 4.0808 0.99 2706 157 0.1499 0.1782 REMARK 3 3 4.0808 - 3.5652 0.95 2559 142 0.1806 0.2287 REMARK 3 4 3.5652 - 3.2393 0.93 2526 133 0.2048 0.2613 REMARK 3 5 3.2393 - 3.0072 0.94 2520 135 0.2377 0.2761 REMARK 3 6 3.0072 - 2.8299 0.95 2529 133 0.2494 0.3059 REMARK 3 7 2.8299 - 2.6882 0.95 2567 124 0.2384 0.2676 REMARK 3 8 2.6882 - 2.5712 0.96 2565 130 0.2412 0.2882 REMARK 3 9 2.5712 - 2.4722 0.97 2567 138 0.2429 0.3072 REMARK 3 10 2.4722 - 2.3869 0.97 2572 152 0.2491 0.3090 REMARK 3 11 2.3869 - 2.3123 0.98 2593 142 0.2473 0.3058 REMARK 3 12 2.3123 - 2.2462 0.97 2586 143 0.2529 0.2875 REMARK 3 13 2.2462 - 2.1871 0.98 2586 152 0.2547 0.3463 REMARK 3 14 2.1871 - 2.1337 0.99 2613 126 0.2560 0.2981 REMARK 3 15 2.1337 - 2.0852 0.99 2645 141 0.2655 0.2902 REMARK 3 16 2.0852 - 2.0408 0.99 2604 131 0.2907 0.3072 REMARK 3 17 2.0408 - 2.0000 0.99 2610 129 0.2925 0.3375 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.260 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.480 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 5324 REMARK 3 ANGLE : 0.817 7249 REMARK 3 CHIRALITY : 0.064 785 REMARK 3 PLANARITY : 0.004 936 REMARK 3 DIHEDRAL : 14.119 3126 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6A48 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 26-JUN-18. REMARK 100 THE DEPOSITION ID IS D_1300008135. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-FEB-11 REMARK 200 TEMPERATURE (KELVIN) : 95 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-17A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.98 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 46788 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 100.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.2 REMARK 200 DATA REDUNDANCY : 6.400 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.09900 REMARK 200 FOR THE DATA SET : 26.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.07 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.2 REMARK 200 DATA REDUNDANCY IN SHELL : 6.20 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 2E26 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.46 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.30 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M TRIS-HCL (PH 8.0), 0.4M SODIUM REMARK 280 CHLORIDE,25% (W/V) PEG MONOMETHYL ETHER 5000, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 42.37650 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 45.26750 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 45.49950 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 45.26750 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 42.37650 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 45.49950 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 700 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 27670 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -5.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 195 REMARK 465 ILE A 196 REMARK 465 HIS A 197 REMARK 465 SER A 198 REMARK 465 ASP A 199 REMARK 465 GLN A 211 REMARK 465 GLN A 212 REMARK 465 LEU A 213 REMARK 465 GLU A 214 REMARK 465 VAL A 336 REMARK 465 GLY A 337 REMARK 465 GLU A 338 REMARK 465 GLU A 398 REMARK 465 GLY A 399 REMARK 465 ILE A 659 REMARK 465 LEU A 660 REMARK 465 LYS A 780 REMARK 465 SER A 781 REMARK 465 VAL A 782 REMARK 465 LEU A 783 REMARK 465 LEU A 866 REMARK 465 GLU A 867 REMARK 465 ASN A 868 REMARK 465 LEU A 869 REMARK 465 TYR A 870 REMARK 465 PHE A 871 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 ARG A 647 NE ARG A 647 CZ -0.124 REMARK 500 ARG A 647 CZ ARG A 647 NH1 -0.087 REMARK 500 ARG A 647 CZ ARG A 647 NH2 -0.096 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 647 CB - CA - C ANGL. DEV. = 12.2 DEGREES REMARK 500 ARG A 647 CG - CD - NE ANGL. DEV. = -20.9 DEGREES REMARK 500 ARG A 647 NE - CZ - NH2 ANGL. DEV. = -3.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE A 235 -73.19 -97.35 REMARK 500 HIS A 237 148.33 -174.21 REMARK 500 SER A 279 16.90 -147.02 REMARK 500 ASN A 348 72.06 53.11 REMARK 500 LEU A 374 -76.16 -86.02 REMARK 500 GLN A 418 55.25 -113.41 REMARK 500 ALA A 441 35.71 -146.04 REMARK 500 GLU A 447 -65.43 -137.54 REMARK 500 ALA A 536 81.77 -152.80 REMARK 500 CYS A 581 67.72 61.67 REMARK 500 GLU A 612 -48.16 68.74 REMARK 500 THR A 646 -168.90 -120.75 REMARK 500 LEU A 742 -62.66 -93.10 REMARK 500 ALA A 743 -75.78 -103.28 REMARK 500 CYS A 786 58.42 -154.05 REMARK 500 TYR A 816 6.68 -66.70 REMARK 500 GLN A 850 -104.16 -143.84 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 903 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 206 O REMARK 620 2 ASP A 208 OD2 80.2 REMARK 620 3 HIS A 237 O 158.2 78.1 REMARK 620 4 ASN A 239 O 97.8 103.1 89.5 REMARK 620 5 ASP A 347 OD1 77.5 156.4 123.6 87.4 REMARK 620 6 ASP A 347 OD2 124.7 154.9 76.9 78.6 47.4 REMARK 620 7 HOH A1070 O 99.7 92.6 78.9 158.3 84.0 80.9 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 901 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 364 O REMARK 620 2 ASP A 366 OD2 74.5 REMARK 620 3 ASP A 388 O 153.6 79.1 REMARK 620 4 ASN A 390 O 93.5 105.5 92.2 REMARK 620 5 ASP A 667 OD1 75.0 147.5 131.1 87.2 REMARK 620 6 ASP A 667 OD2 125.1 159.9 81.2 79.7 50.5 REMARK 620 7 HOH A1031 O 103.5 90.8 77.9 159.1 85.6 80.6 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 904 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 424 O REMARK 620 2 GLU A 426 OE2 88.3 REMARK 620 3 SER A 448 O 165.6 78.9 REMARK 620 4 LEU A 450 O 94.0 96.3 94.0 REMARK 620 5 ASP A 557 OD1 71.5 159.8 121.2 85.1 REMARK 620 6 ASP A 557 OD2 121.3 150.4 71.8 82.0 49.8 REMARK 620 7 HOH A1038 O 99.2 99.3 76.7 159.9 84.7 78.1 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 902 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 715 O REMARK 620 2 SER A 744 O 143.1 REMARK 620 3 LYS A 746 O 100.6 96.9 REMARK 620 4 ASP A 858 OD1 125.1 87.7 87.3 REMARK 620 5 ASP A 858 OD2 75.3 134.7 96.0 49.8 REMARK 620 6 HOH A1010 O 96.5 74.7 160.3 74.7 78.8 REMARK 620 7 HOH A1099 O 71.3 72.1 111.1 153.8 140.0 83.7 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 905 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 790 OD2 REMARK 620 2 GLU A 794 OE1 122.8 REMARK 620 3 GLU A 794 OE2 75.5 52.5 REMARK 620 4 SER A 848 OG 143.7 89.2 140.2 REMARK 620 5 ASP A 853 OD1 84.9 96.6 70.1 109.8 REMARK 620 6 ASP A 853 OD2 131.5 71.8 85.6 70.6 46.6 REMARK 620 N 1 2 3 4 5 DBREF 6A48 A 195 864 UNP Q60841 RELN_MOUSE 195 864 SEQADV 6A48 ARG A 865 UNP Q60841 EXPRESSION TAG SEQADV 6A48 LEU A 866 UNP Q60841 EXPRESSION TAG SEQADV 6A48 GLU A 867 UNP Q60841 EXPRESSION TAG SEQADV 6A48 ASN A 868 UNP Q60841 EXPRESSION TAG SEQADV 6A48 LEU A 869 UNP Q60841 EXPRESSION TAG SEQADV 6A48 TYR A 870 UNP Q60841 EXPRESSION TAG SEQADV 6A48 PHE A 871 UNP Q60841 EXPRESSION TAG SEQRES 1 A 677 GLU ILE HIS SER ASP SER VAL ILE LEU ARG ASP ASP PHE SEQRES 2 A 677 ASP SER TYR GLN GLN LEU GLU LEU ASN PRO ASN ILE TRP SEQRES 3 A 677 VAL GLU CYS SER ASN CYS GLU MET GLY GLU GLN CYS GLY SEQRES 4 A 677 THR ILE MET HIS GLY ASN ALA VAL THR PHE CYS GLU PRO SEQRES 5 A 677 TYR GLY PRO ARG GLU LEU THR THR THR CYS LEU ASN THR SEQRES 6 A 677 THR THR ALA SER VAL LEU GLN PHE SER ILE GLY SER GLY SEQRES 7 A 677 SER CYS ARG PHE SER TYR SER ASP PRO SER ILE THR VAL SEQRES 8 A 677 SER TYR ALA LYS ASN ASN THR ALA ASP TRP ILE GLN LEU SEQRES 9 A 677 GLU LYS ILE ARG ALA PRO SER ASN VAL SER THR VAL ILE SEQRES 10 A 677 HIS ILE LEU TYR LEU PRO GLU GLU ALA LYS GLY GLU SER SEQRES 11 A 677 VAL GLN PHE GLN TRP LYS GLN ASP SER LEU ARG VAL GLY SEQRES 12 A 677 GLU VAL TYR GLU ALA CYS TRP ALA LEU ASP ASN ILE LEU SEQRES 13 A 677 VAL ILE ASN SER ALA HIS ARG GLU VAL VAL LEU GLU ASP SEQRES 14 A 677 ASN LEU ASP PRO VAL ASP THR GLY ASN TRP LEU PHE PHE SEQRES 15 A 677 PRO GLY ALA THR VAL LYS HIS SER CYS GLN SER ASP GLY SEQRES 16 A 677 ASN SER ILE TYR PHE HIS GLY ASN GLU GLY SER GLU PHE SEQRES 17 A 677 ASN PHE ALA THR THR ARG ASP VAL ASP LEU SER THR GLU SEQRES 18 A 677 ASP ILE GLN GLU GLN TRP SER GLU GLU PHE GLU SER GLN SEQRES 19 A 677 PRO THR GLY TRP ASP ILE LEU GLY ALA VAL VAL GLY ALA SEQRES 20 A 677 ASP CYS GLY THR VAL GLU SER GLY LEU SER LEU VAL PHE SEQRES 21 A 677 LEU LYS ASP GLY GLU ARG LYS LEU CYS THR PRO TYR MET SEQRES 22 A 677 ASP THR THR GLY TYR GLY ASN LEU ARG PHE TYR PHE VAL SEQRES 23 A 677 MET GLY GLY ILE CYS ASP PRO GLY VAL SER HIS GLU ASN SEQRES 24 A 677 ASP ILE ILE LEU TYR ALA LYS ILE GLU GLY ARG LYS GLU SEQRES 25 A 677 HIS ILE ALA LEU ASP THR LEU THR TYR SER SER TYR LYS SEQRES 26 A 677 VAL PRO SER LEU VAL SER VAL VAL ILE ASN PRO GLU LEU SEQRES 27 A 677 GLN THR PRO ALA THR LYS PHE CYS LEU ARG GLN LYS SER SEQRES 28 A 677 HIS GLN GLY TYR ASN ARG ASN VAL TRP ALA VAL ASP PHE SEQRES 29 A 677 PHE HIS VAL LEU PRO VAL LEU PRO SER THR MET SER HIS SEQRES 30 A 677 MET ILE GLN PHE SER ILE ASN LEU GLY CYS GLY THR HIS SEQRES 31 A 677 GLN PRO GLY ASN SER VAL SER LEU GLU PHE SER THR ASN SEQRES 32 A 677 HIS GLY ARG SER TRP SER LEU LEU HIS THR GLU CYS LEU SEQRES 33 A 677 PRO GLU ILE CYS ALA GLY PRO HIS LEU PRO HIS SER THR SEQRES 34 A 677 VAL TYR SER SER GLU ASN TYR SER GLY TRP ASN ARG ILE SEQRES 35 A 677 THR ILE PRO LEU PRO ASN ALA ALA LEU THR ARG ASP THR SEQRES 36 A 677 ARG ILE ARG TRP ARG GLN THR GLY PRO ILE LEU GLY ASN SEQRES 37 A 677 MET TRP ALA ILE ASP ASN VAL TYR ILE GLY PRO SER CYS SEQRES 38 A 677 LEU LYS PHE CYS SER GLY ARG GLY GLN CYS THR ARG HIS SEQRES 39 A 677 GLY CYS LYS CYS ASP PRO GLY PHE SER GLY PRO ALA CYS SEQRES 40 A 677 GLU MET ALA SER GLN THR PHE PRO MET PHE ILE SER GLU SEQRES 41 A 677 SER PHE GLY SER ALA ARG LEU SER SER TYR HIS ASN PHE SEQRES 42 A 677 TYR SER ILE ARG GLY ALA GLU VAL SER PHE GLY CYS GLY SEQRES 43 A 677 VAL LEU ALA SER GLY LYS ALA LEU VAL PHE ASN LYS ASP SEQRES 44 A 677 GLY ARG ARG GLN LEU ILE THR SER PHE LEU ASP SER SER SEQRES 45 A 677 GLN SER ARG PHE LEU GLN PHE THR LEU ARG LEU GLY SER SEQRES 46 A 677 LYS SER VAL LEU SER THR CYS ARG ALA PRO ASP GLN PRO SEQRES 47 A 677 GLY GLU GLY VAL LEU LEU HIS TYR SER TYR ASP ASN GLY SEQRES 48 A 677 ILE THR TRP LYS LEU LEU GLU HIS TYR SER TYR VAL ASN SEQRES 49 A 677 TYR HIS GLU PRO ARG ILE ILE SER VAL GLU LEU PRO ASP SEQRES 50 A 677 ASP ALA ARG GLN PHE GLY ILE GLN PHE ARG TRP TRP GLN SEQRES 51 A 677 PRO TYR HIS SER SER GLN GLY GLU ASP VAL TRP ALA ILE SEQRES 52 A 677 ASP GLU ILE VAL MET THR SER ARG LEU GLU ASN LEU TYR SEQRES 53 A 677 PHE HET CA A 901 1 HET CA A 902 1 HET CA A 903 1 HET CA A 904 1 HET CA A 905 1 HET NAG A 906 14 HET NAG A 907 14 HET NAG A 908 14 HETNAM CA CALCIUM ION HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 2 CA 5(CA 2+) FORMUL 7 NAG 3(C8 H15 N O6) FORMUL 10 HOH *151(H2 O) HELIX 1 AA1 PRO A 317 LYS A 321 5 5 HELIX 2 AA2 ASP A 369 TRP A 373 5 5 HELIX 3 AA3 SER A 490 ASN A 493 5 4 HELIX 4 AA4 ASN A 529 GLN A 533 5 5 HELIX 5 AA5 PRO A 641 LEU A 645 5 5 HELIX 6 AA6 CYS A 675 GLY A 681 5 7 HELIX 7 AA7 ARG A 720 TYR A 724 5 5 HELIX 8 AA8 PRO A 830 ARG A 834 5 5 SHEET 1 AA1 4 VAL A 201 ASP A 205 0 SHEET 2 AA1 4 TRP A 344 ASN A 353 -1 O VAL A 351 N ILE A 202 SHEET 3 AA1 4 ALA A 240 PHE A 243 -1 N VAL A 241 O LEU A 346 SHEET 4 AA1 4 GLU A 227 GLY A 229 -1 N GLU A 227 O THR A 242 SHEET 1 AA2 4 VAL A 201 ASP A 205 0 SHEET 2 AA2 4 TRP A 344 ASN A 353 -1 O VAL A 351 N ILE A 202 SHEET 3 AA2 4 ALA A 262 GLY A 270 -1 N GLN A 266 O LEU A 350 SHEET 4 AA2 4 VAL A 310 TYR A 315 -1 O HIS A 312 N PHE A 267 SHEET 1 AA3 4 GLU A 251 THR A 253 0 SHEET 2 AA3 4 VAL A 325 GLN A 331 -1 O TRP A 329 N LEU A 252 SHEET 3 AA3 4 ILE A 283 LYS A 289 -1 N THR A 284 O LYS A 330 SHEET 4 AA3 4 ILE A 296 ILE A 301 -1 O LEU A 298 N VAL A 285 SHEET 1 AA4 4 LEU A 361 ASP A 363 0 SHEET 2 AA4 4 TRP A 664 PRO A 673 -1 O ILE A 671 N LEU A 361 SHEET 3 AA4 4 SER A 391 PHE A 394 -1 N PHE A 394 O TRP A 664 SHEET 4 AA4 4 ALA A 379 LYS A 382 -1 N THR A 380 O TYR A 393 SHEET 1 AA5 4 LEU A 361 ASP A 363 0 SHEET 2 AA5 4 TRP A 664 PRO A 673 -1 O ILE A 671 N LEU A 361 SHEET 3 AA5 4 HIS A 571 LEU A 579 -1 N SER A 576 O ASP A 667 SHEET 4 AA5 4 TRP A 633 PRO A 639 -1 O ILE A 636 N PHE A 575 SHEET 1 AA6 4 PHE A 404 THR A 406 0 SHEET 2 AA6 4 ARG A 650 GLN A 655 -1 O TRP A 653 N ALA A 405 SHEET 3 AA6 4 SER A 589 SER A 595 -1 N SER A 591 O ARG A 654 SHEET 4 AA6 4 SER A 603 LEU A 604 -1 O SER A 603 N PHE A 594 SHEET 1 AA7 4 PHE A 404 THR A 406 0 SHEET 2 AA7 4 ARG A 650 GLN A 655 -1 O TRP A 653 N ALA A 405 SHEET 3 AA7 4 SER A 589 SER A 595 -1 N SER A 591 O ARG A 654 SHEET 4 AA7 4 VAL A 624 SER A 626 -1 O TYR A 625 N VAL A 590 SHEET 1 AA8 4 TRP A 421 GLU A 423 0 SHEET 2 AA8 4 TRP A 554 LEU A 562 -1 O PHE A 559 N GLU A 423 SHEET 3 AA8 4 SER A 451 PHE A 454 -1 N PHE A 454 O TRP A 554 SHEET 4 AA8 4 VAL A 438 GLY A 440 -1 N GLY A 440 O SER A 451 SHEET 1 AA9 4 TRP A 421 GLU A 423 0 SHEET 2 AA9 4 TRP A 554 LEU A 562 -1 O PHE A 559 N GLU A 423 SHEET 3 AA9 4 ASN A 474 MET A 481 -1 N ARG A 476 O HIS A 560 SHEET 4 AA9 4 SER A 522 VAL A 527 -1 O VAL A 524 N PHE A 477 SHEET 1 AB1 5 ASP A 433 LEU A 435 0 SHEET 2 AB1 5 LYS A 461 CYS A 463 -1 O LYS A 461 N LEU A 435 SHEET 3 AB1 5 THR A 537 GLN A 543 -1 O LEU A 541 N LEU A 462 SHEET 4 AB1 5 ILE A 495 ILE A 501 -1 N ILE A 496 O ARG A 542 SHEET 5 AB1 5 HIS A 507 LEU A 513 -1 O ILE A 508 N ALA A 499 SHEET 1 AB2 2 GLY A 683 THR A 686 0 SHEET 2 AB2 2 GLY A 689 CYS A 692 -1 O LYS A 691 N GLN A 684 SHEET 1 AB3 2 PHE A 696 SER A 697 0 SHEET 2 AB3 2 MET A 703 ALA A 704 -1 O MET A 703 N SER A 697 SHEET 1 AB4 4 ILE A 712 GLU A 714 0 SHEET 2 AB4 4 TRP A 855 MET A 862 -1 O MET A 862 N ILE A 712 SHEET 3 AB4 4 ALA A 747 PHE A 750 -1 N LEU A 748 O ILE A 857 SHEET 4 AB4 4 GLU A 734 SER A 736 -1 N GLU A 734 O VAL A 749 SHEET 1 AB5 4 ILE A 712 GLU A 714 0 SHEET 2 AB5 4 TRP A 855 MET A 862 -1 O MET A 862 N ILE A 712 SHEET 3 AB5 4 PHE A 770 LEU A 777 -1 N THR A 774 O ASP A 858 SHEET 4 AB5 4 ARG A 823 GLU A 828 -1 O ILE A 825 N PHE A 773 SHEET 1 AB6 4 PHE A 727 ARG A 731 0 SHEET 2 AB6 4 ARG A 756 THR A 760 -1 O ILE A 759 N SER A 729 SHEET 3 AB6 4 PHE A 836 GLN A 844 -1 O PHE A 840 N THR A 760 SHEET 4 AB6 4 LEU A 763 ASP A 764 -1 N LEU A 763 O ILE A 838 SHEET 1 AB7 5 PHE A 727 ARG A 731 0 SHEET 2 AB7 5 ARG A 756 THR A 760 -1 O ILE A 759 N SER A 729 SHEET 3 AB7 5 PHE A 836 GLN A 844 -1 O PHE A 840 N THR A 760 SHEET 4 AB7 5 VAL A 796 SER A 801 -1 N HIS A 799 O ARG A 841 SHEET 5 AB7 5 LYS A 809 TYR A 814 -1 O TYR A 814 N VAL A 796 SSBOND 1 CYS A 223 CYS A 226 1555 1555 2.03 SSBOND 2 CYS A 232 CYS A 274 1555 1555 2.04 SSBOND 3 CYS A 244 CYS A 343 1555 1555 2.04 SSBOND 4 CYS A 385 CYS A 581 1555 1555 2.03 SSBOND 5 CYS A 443 CYS A 485 1555 1555 2.04 SSBOND 6 CYS A 463 CYS A 540 1555 1555 2.04 SSBOND 7 CYS A 609 CYS A 614 1555 1555 2.04 SSBOND 8 CYS A 675 CYS A 685 1555 1555 2.04 SSBOND 9 CYS A 679 CYS A 690 1555 1555 2.04 SSBOND 10 CYS A 692 CYS A 701 1555 1555 2.05 SSBOND 11 CYS A 739 CYS A 786 1555 1555 2.03 LINK ND2 ASN A 258 C1 NAG A 907 1555 1555 1.44 LINK ND2 ASN A 290 C1 NAG A 906 1555 1555 1.45 LINK ND2 ASN A 306 C1 NAG A 908 1555 1555 1.46 LINK O ASP A 206 CA CA A 903 1555 1555 2.32 LINK OD2 ASP A 208 CA CA A 903 1555 1555 2.37 LINK O HIS A 237 CA CA A 903 1555 1555 2.33 LINK O ASN A 239 CA CA A 903 1555 1555 2.39 LINK OD1 ASP A 347 CA CA A 903 1555 1555 2.54 LINK OD2 ASP A 347 CA CA A 903 1555 1555 2.88 LINK O ASN A 364 CA CA A 901 1555 1555 2.35 LINK OD2 ASP A 366 CA CA A 901 1555 1555 2.44 LINK O ASP A 388 CA CA A 901 1555 1555 2.42 LINK O ASN A 390 CA CA A 901 1555 1555 2.33 LINK O GLU A 424 CA CA A 904 1555 1555 2.39 LINK OE2 GLU A 426 CA CA A 904 1555 1555 2.62 LINK O SER A 448 CA CA A 904 1555 1555 2.36 LINK O LEU A 450 CA CA A 904 1555 1555 2.37 LINK OD1 ASP A 557 CA CA A 904 1555 1555 2.54 LINK OD2 ASP A 557 CA CA A 904 1555 1555 2.66 LINK OD1 ASP A 667 CA CA A 901 1555 1555 2.61 LINK OD2 ASP A 667 CA CA A 901 1555 1555 2.53 LINK O SER A 715 CA CA A 902 1555 1555 2.37 LINK O SER A 744 CA CA A 902 1555 1555 2.28 LINK O LYS A 746 CA CA A 902 1555 1555 2.30 LINK OD2 ASP A 790 CA CA A 905 1555 1555 2.38 LINK OE1 GLU A 794 CA CA A 905 1555 1555 2.41 LINK OE2 GLU A 794 CA CA A 905 1555 1555 2.55 LINK OG SER A 848 CA CA A 905 1555 1555 2.44 LINK OD1 ASP A 853 CA CA A 905 1555 1555 2.77 LINK OD2 ASP A 853 CA CA A 905 1555 1555 2.79 LINK OD1 ASP A 858 CA CA A 902 1555 1555 2.62 LINK OD2 ASP A 858 CA CA A 902 1555 1555 2.59 LINK CA CA A 901 O HOH A1031 1555 1555 2.37 LINK CA CA A 902 O HOH A1010 1555 1555 2.48 LINK CA CA A 902 O HOH A1099 1555 1555 2.62 LINK CA CA A 903 O HOH A1070 1555 1555 2.37 LINK CA CA A 904 O HOH A1038 1555 1555 2.41 CISPEP 1 ASP A 366 PRO A 367 0 0.49 CRYST1 84.753 90.999 90.535 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011799 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010989 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011045 0.00000