HEADER BIOSYNTHETIC PROTEIN 23-JUN-18 6A5G TITLE THE STRUCTURE OF [4+2] AND [6+4] CYCLASE IN THE BIOSYNTHETIC PATHWAY TITLE 2 OF STREPTOSEOMYCIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: [4+2] AND [4+6] CYCLASE STMD; COMPND 3 CHAIN: A, C, D, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOMYCES SEOULENSIS; SOURCE 3 ORGANISM_TAXID: 73044; SOURCE 4 STRAIN: A01; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI 'BL21-GOLD(DE3)PLYSS AG'; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 866768 KEYWDS [4+2] AND [4+6] CYCLASE, STREPTOSEOMYCIN, BIOSYNTHESIS, BIOSYNTHETIC KEYWDS 2 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR B.ZHANG,H.M.GE REVDAT 4 22-NOV-23 6A5G 1 REMARK REVDAT 3 17-APR-19 6A5G 1 JRNL REVDAT 2 10-APR-19 6A5G 1 JRNL REVDAT 1 06-FEB-19 6A5G 0 JRNL AUTH B.ZHANG,K.B.WANG,W.WANG,X.WANG,F.LIU,J.ZHU,J.SHI,L.Y.LI, JRNL AUTH 2 H.HAN,K.XU,H.Y.QIAO,X.ZHANG,R.H.JIAO,K.N.HOUK,Y.LIANG, JRNL AUTH 3 R.X.TAN,H.M.GE JRNL TITL ENZYME-CATALYSED [6+4] CYCLOADDITIONS IN THE BIOSYNTHESIS OF JRNL TITL 2 NATURAL PRODUCTS. JRNL REF NATURE V. 568 122 2019 JRNL REFN ESSN 1476-4687 JRNL PMID 30867595 JRNL DOI 10.1038/S41586-019-1021-X REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.13_2998 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.60 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 90.7 REMARK 3 NUMBER OF REFLECTIONS : 24828 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.185 REMARK 3 R VALUE (WORKING SET) : 0.180 REMARK 3 FREE R VALUE : 0.246 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 8.010 REMARK 3 FREE R VALUE TEST SET COUNT : 1989 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.6146 - 5.5406 0.99 1935 168 0.1901 0.2336 REMARK 3 2 5.5406 - 4.3987 1.00 1844 161 0.1521 0.1998 REMARK 3 3 4.3987 - 3.8429 0.85 1548 134 0.1527 0.2056 REMARK 3 4 3.8429 - 3.4917 0.80 1438 125 0.1776 0.2369 REMARK 3 5 3.4917 - 3.2415 0.76 1367 118 0.1847 0.2517 REMARK 3 6 3.2415 - 3.0504 1.00 1779 156 0.1834 0.2523 REMARK 3 7 3.0504 - 2.8976 1.00 1777 154 0.1933 0.2489 REMARK 3 8 2.8976 - 2.7715 1.00 1795 157 0.1991 0.2746 REMARK 3 9 2.7715 - 2.6648 0.98 1132 100 0.2036 0.2929 REMARK 3 10 2.6648 - 2.5729 0.97 1255 110 0.1911 0.2851 REMARK 3 11 2.5729 - 2.4924 0.99 1738 150 0.1882 0.2928 REMARK 3 12 2.4924 - 2.4212 0.99 1776 154 0.1782 0.2823 REMARK 3 13 2.4212 - 2.3574 0.99 1727 151 0.1846 0.2775 REMARK 3 14 2.3574 - 2.2999 0.98 1728 151 0.2029 0.2862 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.280 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.910 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 23.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 28.26 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 15.0069 20.5172 37.2269 REMARK 3 T TENSOR REMARK 3 T11: 0.1590 T22: 0.1431 REMARK 3 T33: 0.1889 T12: 0.0034 REMARK 3 T13: -0.0201 T23: 0.0081 REMARK 3 L TENSOR REMARK 3 L11: 0.4791 L22: 0.4012 REMARK 3 L33: 1.0118 L12: 0.0085 REMARK 3 L13: -0.1021 L23: 0.2311 REMARK 3 S TENSOR REMARK 3 S11: -0.0049 S12: -0.0016 S13: 0.0655 REMARK 3 S21: -0.0070 S22: 0.0045 S23: -0.0316 REMARK 3 S31: -0.1146 S32: 0.0466 S33: -0.0015 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN A REMARK 3 SELECTION : (CHAIN B AND (RESID 3 THROUGH 117 OR REMARK 3 (RESID 118 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB )) OR RESID 119 REMARK 3 THROUGH 152)) REMARK 3 ATOM PAIRS NUMBER : 2777 REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: CHAIN A REMARK 3 SELECTION : (CHAIN C AND (RESID 3 THROUGH 117 OR REMARK 3 (RESID 118 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB )) OR RESID 119 REMARK 3 THROUGH 152)) REMARK 3 ATOM PAIRS NUMBER : 2777 REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 3 REMARK 3 REFERENCE SELECTION: CHAIN A REMARK 3 SELECTION : (CHAIN D AND (RESID 3 THROUGH 117 OR REMARK 3 (RESID 118 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB )) OR RESID 119 REMARK 3 THROUGH 152)) REMARK 3 ATOM PAIRS NUMBER : 2777 REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6A5G COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 25-JUN-18. REMARK 100 THE DEPOSITION ID IS D_1300008183. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-JAN-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL18U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97853 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24828 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 48.604 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 90.7 REMARK 200 DATA REDUNDANCY : 6.400 REMARK 200 R MERGE (I) : 0.19900 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 20.9300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.38 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 6A5F REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.55 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.18 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2 M AMMONIUM SULFATE, 100 MM MES, PH REMARK 280 6.5, 200MM NACL, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 295.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,-Y,-Z+1/2 REMARK 290 4555 -X+1/2,-Y,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 26.05450 REMARK 290 SMTRY2 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 67.39850 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 26.05450 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 67.39850 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1980 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13940 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -16.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1950 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14440 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -16.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 GLN A 153 REMARK 465 LEU A 154 REMARK 465 ALA A 155 REMARK 465 ALA A 156 REMARK 465 ALA A 157 REMARK 465 LEU A 158 REMARK 465 GLU A 159 REMARK 465 HIS A 160 REMARK 465 HIS A 161 REMARK 465 HIS A 162 REMARK 465 HIS A 163 REMARK 465 HIS A 164 REMARK 465 HIS A 165 REMARK 465 MET C 1 REMARK 465 ALA C 2 REMARK 465 GLN C 153 REMARK 465 LEU C 154 REMARK 465 ALA C 155 REMARK 465 ALA C 156 REMARK 465 ALA C 157 REMARK 465 LEU C 158 REMARK 465 GLU C 159 REMARK 465 HIS C 160 REMARK 465 HIS C 161 REMARK 465 HIS C 162 REMARK 465 HIS C 163 REMARK 465 HIS C 164 REMARK 465 HIS C 165 REMARK 465 MET D 1 REMARK 465 ALA D 2 REMARK 465 GLN D 153 REMARK 465 LEU D 154 REMARK 465 ALA D 155 REMARK 465 ALA D 156 REMARK 465 ALA D 157 REMARK 465 LEU D 158 REMARK 465 GLU D 159 REMARK 465 HIS D 160 REMARK 465 HIS D 161 REMARK 465 HIS D 162 REMARK 465 HIS D 163 REMARK 465 HIS D 164 REMARK 465 HIS D 165 REMARK 465 MET B 1 REMARK 465 ALA B 2 REMARK 465 HIS B 160 REMARK 465 HIS B 161 REMARK 465 HIS B 162 REMARK 465 HIS B 163 REMARK 465 HIS B 164 REMARK 465 HIS B 165 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 118 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 291 O HOH B 294 2.04 REMARK 500 OG1 THR B 5 OE1 GLU B 7 2.04 REMARK 500 OE2 GLU A 124 OH TYR A 126 2.10 REMARK 500 O HOH A 244 O HOH A 265 2.13 REMARK 500 O HOH C 210 O HOH C 242 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NE2 GLN C 57 O GLY D 64 3565 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 CYS B 18 CB CYS B 18 SG -0.119 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR B 17 34.61 -84.20 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 268 DISTANCE = 5.83 ANGSTROMS REMARK 525 HOH B 294 DISTANCE = 6.09 ANGSTROMS DBREF 6A5G A 1 165 PDB 6A5G 6A5G 1 165 DBREF 6A5G C 1 165 PDB 6A5G 6A5G 1 165 DBREF 6A5G D 1 165 PDB 6A5G 6A5G 1 165 DBREF 6A5G B 1 165 PDB 6A5G 6A5G 1 165 SEQRES 1 A 165 MET ALA GLU ILE THR GLN GLU LEU VAL ALA ALA ALA TYR SEQRES 2 A 165 GLU ALA VAL THR CYS GLY ASP ARG GLU LYS THR ALA LEU SEQRES 3 A 165 TYR TRP SER GLU ASP LEU ARG PHE PHE ALA PRO GLY SER SEQRES 4 A 165 HIS ALA GLY SER GLY TRP ARG VAL GLY ILE ASP ASP PHE SEQRES 5 A 165 LEU SER TYR VAL GLN ASP MET LEU ALA ALA SER GLY GLY SEQRES 6 A 165 SER TRP SER MET GLN PRO ILE THR LEU LEU ILE ASN ASN SEQRES 7 A 165 GLU ASP GLY TYR SER VAL ASP ALA ASN ARG ILE HIS ALA SEQRES 8 A 165 VAL ARG GLU GLY ALA PRO LYS ASP SER THR SER PRO PHE SEQRES 9 A 165 ASP VAL LEU ASP ILE SER GLY VAL GLN MET LEU LYS TRP SEQRES 10 A 165 GLU ASN GLY LYS VAL VAL GLU GLY TYR GLY GLY ILE PHE SEQRES 11 A 165 GLY ASP GLY GLY THR ASN TYR THR GLN TRP TRP SER PRO SEQRES 12 A 165 VAL ASP GLY ALA GLY GLU ARG ARG TYR GLN LEU ALA ALA SEQRES 13 A 165 ALA LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 C 165 MET ALA GLU ILE THR GLN GLU LEU VAL ALA ALA ALA TYR SEQRES 2 C 165 GLU ALA VAL THR CYS GLY ASP ARG GLU LYS THR ALA LEU SEQRES 3 C 165 TYR TRP SER GLU ASP LEU ARG PHE PHE ALA PRO GLY SER SEQRES 4 C 165 HIS ALA GLY SER GLY TRP ARG VAL GLY ILE ASP ASP PHE SEQRES 5 C 165 LEU SER TYR VAL GLN ASP MET LEU ALA ALA SER GLY GLY SEQRES 6 C 165 SER TRP SER MET GLN PRO ILE THR LEU LEU ILE ASN ASN SEQRES 7 C 165 GLU ASP GLY TYR SER VAL ASP ALA ASN ARG ILE HIS ALA SEQRES 8 C 165 VAL ARG GLU GLY ALA PRO LYS ASP SER THR SER PRO PHE SEQRES 9 C 165 ASP VAL LEU ASP ILE SER GLY VAL GLN MET LEU LYS TRP SEQRES 10 C 165 GLU ASN GLY LYS VAL VAL GLU GLY TYR GLY GLY ILE PHE SEQRES 11 C 165 GLY ASP GLY GLY THR ASN TYR THR GLN TRP TRP SER PRO SEQRES 12 C 165 VAL ASP GLY ALA GLY GLU ARG ARG TYR GLN LEU ALA ALA SEQRES 13 C 165 ALA LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 D 165 MET ALA GLU ILE THR GLN GLU LEU VAL ALA ALA ALA TYR SEQRES 2 D 165 GLU ALA VAL THR CYS GLY ASP ARG GLU LYS THR ALA LEU SEQRES 3 D 165 TYR TRP SER GLU ASP LEU ARG PHE PHE ALA PRO GLY SER SEQRES 4 D 165 HIS ALA GLY SER GLY TRP ARG VAL GLY ILE ASP ASP PHE SEQRES 5 D 165 LEU SER TYR VAL GLN ASP MET LEU ALA ALA SER GLY GLY SEQRES 6 D 165 SER TRP SER MET GLN PRO ILE THR LEU LEU ILE ASN ASN SEQRES 7 D 165 GLU ASP GLY TYR SER VAL ASP ALA ASN ARG ILE HIS ALA SEQRES 8 D 165 VAL ARG GLU GLY ALA PRO LYS ASP SER THR SER PRO PHE SEQRES 9 D 165 ASP VAL LEU ASP ILE SER GLY VAL GLN MET LEU LYS TRP SEQRES 10 D 165 GLU ASN GLY LYS VAL VAL GLU GLY TYR GLY GLY ILE PHE SEQRES 11 D 165 GLY ASP GLY GLY THR ASN TYR THR GLN TRP TRP SER PRO SEQRES 12 D 165 VAL ASP GLY ALA GLY GLU ARG ARG TYR GLN LEU ALA ALA SEQRES 13 D 165 ALA LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 B 165 MET ALA GLU ILE THR GLN GLU LEU VAL ALA ALA ALA TYR SEQRES 2 B 165 GLU ALA VAL THR CYS GLY ASP ARG GLU LYS THR ALA LEU SEQRES 3 B 165 TYR TRP SER GLU ASP LEU ARG PHE PHE ALA PRO GLY SER SEQRES 4 B 165 HIS ALA GLY SER GLY TRP ARG VAL GLY ILE ASP ASP PHE SEQRES 5 B 165 LEU SER TYR VAL GLN ASP MET LEU ALA ALA SER GLY GLY SEQRES 6 B 165 SER TRP SER MET GLN PRO ILE THR LEU LEU ILE ASN ASN SEQRES 7 B 165 GLU ASP GLY TYR SER VAL ASP ALA ASN ARG ILE HIS ALA SEQRES 8 B 165 VAL ARG GLU GLY ALA PRO LYS ASP SER THR SER PRO PHE SEQRES 9 B 165 ASP VAL LEU ASP ILE SER GLY VAL GLN MET LEU LYS TRP SEQRES 10 B 165 GLU ASN GLY LYS VAL VAL GLU GLY TYR GLY GLY ILE PHE SEQRES 11 B 165 GLY ASP GLY GLY THR ASN TYR THR GLN TRP TRP SER PRO SEQRES 12 B 165 VAL ASP GLY ALA GLY GLU ARG ARG TYR GLN LEU ALA ALA SEQRES 13 B 165 ALA LEU GLU HIS HIS HIS HIS HIS HIS FORMUL 5 HOH *251(H2 O) HELIX 1 AA1 THR A 5 THR A 17 1 13 HELIX 2 AA2 ASP A 20 ALA A 25 1 6 HELIX 3 AA3 GLY A 48 SER A 63 1 16 HELIX 4 AA4 ASP A 132 SER A 142 1 11 HELIX 5 AA5 THR C 5 THR C 17 1 13 HELIX 6 AA6 ASP C 20 ALA C 25 1 6 HELIX 7 AA7 GLY C 48 GLY C 64 1 17 HELIX 8 AA8 ASP C 132 SER C 142 1 11 HELIX 9 AA9 THR D 5 GLY D 19 1 15 HELIX 10 AB1 ASP D 20 TYR D 27 1 8 HELIX 11 AB2 GLY D 48 GLY D 64 1 17 HELIX 12 AB3 ASP D 132 SER D 142 1 11 HELIX 13 AB4 THR B 5 THR B 17 1 13 HELIX 14 AB5 ASP B 20 ALA B 25 1 6 HELIX 15 AB6 GLY B 48 SER B 63 1 16 HELIX 16 AB7 ASP B 132 SER B 142 1 11 SHEET 1 AA1 6 GLY A 44 VAL A 47 0 SHEET 2 AA1 6 TRP A 28 ALA A 36 -1 N PHE A 34 O ARG A 46 SHEET 3 AA1 6 LYS A 121 PHE A 130 1 O GLY A 125 N PHE A 35 SHEET 4 AA1 6 LYS D 121 PHE D 130 -1 O ILE D 129 N ILE A 129 SHEET 5 AA1 6 TRP D 28 ALA D 36 1 N PHE D 35 O GLY D 125 SHEET 6 AA1 6 GLY D 44 VAL D 47 -1 O ARG D 46 N PHE D 34 SHEET 1 AA2 8 SER A 68 ASN A 77 0 SHEET 2 AA2 8 TYR A 82 VAL A 92 -1 O ALA A 86 N ILE A 72 SHEET 3 AA2 8 VAL A 106 GLU A 118 -1 O LEU A 107 N ALA A 91 SHEET 4 AA2 8 LYS A 121 PHE A 130 -1 O GLY A 128 N VAL A 112 SHEET 5 AA2 8 LYS D 121 PHE D 130 -1 O ILE D 129 N ILE A 129 SHEET 6 AA2 8 VAL D 106 GLU D 118 -1 N LYS D 116 O GLU D 124 SHEET 7 AA2 8 TYR D 82 VAL D 92 -1 N ALA D 91 O LEU D 107 SHEET 8 AA2 8 SER D 68 ASN D 77 -1 N ILE D 72 O ALA D 86 SHEET 1 AA3 6 GLY C 44 VAL C 47 0 SHEET 2 AA3 6 TRP C 28 ALA C 36 -1 N PHE C 34 O ARG C 46 SHEET 3 AA3 6 LYS C 121 PHE C 130 1 O VAL C 122 N SER C 29 SHEET 4 AA3 6 LYS B 121 PHE B 130 -1 O ILE B 129 N ILE C 129 SHEET 5 AA3 6 TRP B 28 ALA B 36 1 N PHE B 35 O GLY B 125 SHEET 6 AA3 6 GLY B 44 VAL B 47 -1 O ARG B 46 N PHE B 34 SHEET 1 AA4 8 SER C 68 ASN C 77 0 SHEET 2 AA4 8 TYR C 82 VAL C 92 -1 O VAL C 84 N LEU C 75 SHEET 3 AA4 8 VAL C 106 GLU C 118 -1 O LEU C 107 N ALA C 91 SHEET 4 AA4 8 LYS C 121 PHE C 130 -1 O GLU C 124 N LYS C 116 SHEET 5 AA4 8 LYS B 121 PHE B 130 -1 O ILE B 129 N ILE C 129 SHEET 6 AA4 8 VAL B 106 GLU B 118 -1 N SER B 110 O PHE B 130 SHEET 7 AA4 8 TYR B 82 VAL B 92 -1 N ALA B 91 O LEU B 107 SHEET 8 AA4 8 SER B 68 ASN B 77 -1 N ILE B 72 O ALA B 86 CRYST1 52.109 85.023 134.797 90.00 90.00 90.00 P 21 2 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019191 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011762 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007419 0.00000