HEADER TRANSCRIPTION 25-JUN-18 6A5Q TITLE STRUCTURE OF 14-3-3 BETA IN COMPLEX WITH TFEB 14-3-3 BINDING MOTIF COMPND MOL_ID: 1; COMPND 2 MOLECULE: 14-3-3 PROTEIN BETA/ALPHA; COMPND 3 CHAIN: B, A, C; COMPND 4 SYNONYM: PROTEIN 1054,PROTEIN KINASE C INHIBITOR PROTEIN 1,KCIP-1; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: TFEB PS211-PEPTIDE; COMPND 8 CHAIN: D, E, F; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: YWHAB; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_TAXID: 9606 KEYWDS PHOSPHOSERIN, REGULATION, TRANSCRIPTION FACTOR, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR Y.XU,J.Q.REN,W.FENG REVDAT 4 22-NOV-23 6A5Q 1 REMARK REVDAT 3 29-MAY-19 6A5Q 1 JRNL REVDAT 2 27-FEB-19 6A5Q 1 REMARK REVDAT 1 13-FEB-19 6A5Q 0 JRNL AUTH Y.XU,J.REN,X.HE,H.CHEN,T.WEI,W.FENG JRNL TITL YWHA/14-3-3 PROTEINS RECOGNIZE PHOSPHORYLATED TFEB BY A JRNL TITL 2 NONCANONICAL MODE FOR CONTROLLING TFEB CYTOPLASMIC JRNL TITL 3 LOCALIZATION. JRNL REF AUTOPHAGY V. 15 1017 2019 JRNL REFN ESSN 1554-8635 JRNL PMID 30653408 JRNL DOI 10.1080/15548627.2019.1569928 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.12_2829 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.88 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 60079 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.187 REMARK 3 R VALUE (WORKING SET) : 0.186 REMARK 3 FREE R VALUE : 0.230 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.330 REMARK 3 FREE R VALUE TEST SET COUNT : 2002 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 0.0000 - 4.8181 1.00 4443 157 0.1901 0.1990 REMARK 3 2 4.8181 - 3.8256 1.00 4256 147 0.1648 0.2218 REMARK 3 3 3.8256 - 3.3424 1.00 4221 142 0.1834 0.2258 REMARK 3 4 3.3424 - 3.0369 1.00 4174 144 0.1873 0.2210 REMARK 3 5 3.0369 - 2.8193 1.00 4151 146 0.1941 0.2282 REMARK 3 6 2.8193 - 2.6532 1.00 4140 140 0.1862 0.2434 REMARK 3 7 2.6532 - 2.5203 1.00 4150 144 0.1905 0.2333 REMARK 3 8 2.5203 - 2.4106 0.99 4102 138 0.1815 0.2426 REMARK 3 9 2.4106 - 2.3178 0.99 4119 139 0.1857 0.2543 REMARK 3 10 2.3178 - 2.2379 0.99 4044 145 0.1845 0.2433 REMARK 3 11 2.2379 - 2.1679 0.99 4106 140 0.1896 0.2403 REMARK 3 12 2.1679 - 2.1059 0.99 4064 137 0.1940 0.2615 REMARK 3 13 2.1059 - 2.0505 0.99 4062 143 0.2089 0.2589 REMARK 3 14 2.0505 - 2.0005 0.99 4045 140 0.2230 0.2891 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.210 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.540 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.23 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 5930 REMARK 3 ANGLE : 0.805 8010 REMARK 3 CHIRALITY : 0.044 896 REMARK 3 PLANARITY : 0.005 1046 REMARK 3 DIHEDRAL : 2.616 5115 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6A5Q COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 27-JUN-18. REMARK 100 THE DEPOSITION ID IS D_1300008195. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-JUL-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9789 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 1 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 60151 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 11.60 REMARK 200 R MERGE (I) : 0.10600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 24.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.07 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.8 REMARK 200 DATA REDUNDANCY IN SHELL : 11.30 REMARK 200 R MERGE FOR SHELL (I) : 0.68600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2BQ0 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.11 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.47 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M SODIUM MALONATE, AND 12% (W/V) REMARK 280 PEG 3350, PH 4.0, EVAPORATION, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 139.73333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 69.86667 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 69.86667 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 139.73333 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6110 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22620 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -46.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, A, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5940 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22300 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -47.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 0.866025 0.000000 127.75500 REMARK 350 BIOMT2 2 0.866025 0.500000 0.000000 -73.75938 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY B -3 REMARK 465 PRO B -2 REMARK 465 GLY B -1 REMARK 465 SER B 0 REMARK 465 MET B 1 REMARK 465 THR B 2 REMARK 465 GLN B 235 REMARK 465 GLY B 236 REMARK 465 ASP B 237 REMARK 465 GLU B 238 REMARK 465 GLY B 239 REMARK 465 ASP B 240 REMARK 465 ALA B 241 REMARK 465 GLY B 242 REMARK 465 GLU B 243 REMARK 465 GLY B 244 REMARK 465 GLU B 245 REMARK 465 ASN B 246 REMARK 465 GLY A -3 REMARK 465 PRO A -2 REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 465 GLN A 235 REMARK 465 GLY A 236 REMARK 465 ASP A 237 REMARK 465 GLU A 238 REMARK 465 GLY A 239 REMARK 465 ASP A 240 REMARK 465 ALA A 241 REMARK 465 GLY A 242 REMARK 465 GLU A 243 REMARK 465 GLY A 244 REMARK 465 GLU A 245 REMARK 465 ASN A 246 REMARK 465 GLY C -3 REMARK 465 PRO C -2 REMARK 465 GLY C -1 REMARK 465 SER C 0 REMARK 465 MET C 1 REMARK 465 THR C 2 REMARK 465 GLU C 72 REMARK 465 ARG C 73 REMARK 465 ASN C 74 REMARK 465 GLU C 75 REMARK 465 LYS C 76 REMARK 465 LYS C 77 REMARK 465 GLN C 235 REMARK 465 GLY C 236 REMARK 465 ASP C 237 REMARK 465 GLU C 238 REMARK 465 GLY C 239 REMARK 465 ASP C 240 REMARK 465 ALA C 241 REMARK 465 GLY C 242 REMARK 465 GLU C 243 REMARK 465 GLY C 244 REMARK 465 GLU C 245 REMARK 465 ASN C 246 REMARK 465 LEU D -1 REMARK 465 VAL D 0 REMARK 465 GLY D 1 REMARK 465 LEU E -1 REMARK 465 VAL E 0 REMARK 465 LEU F -1 REMARK 465 VAL F 0 REMARK 465 GLY F 1 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 HIS A 36 CG ND1 CD2 CE1 NE2 REMARK 470 GLU A 37 CG CD OE1 OE2 REMARK 470 LYS A 70 CG CD CE NZ REMARK 470 ARG A 73 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 75 CG CD OE1 OE2 REMARK 470 GLN C 69 CG CD OE1 NE2 REMARK 470 LYS C 70 CG CD CE NZ REMARK 470 THR C 71 OG1 CG2 REMARK 470 GLN C 78 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 34 32.27 -79.12 REMARK 500 ARG A 73 63.91 64.35 REMARK 500 ASN A 74 94.80 -175.00 REMARK 500 GLU A 233 57.36 -93.37 REMARK 500 ARG C 20 77.24 -112.78 REMARK 500 GLN C 69 31.94 -75.16 REMARK 500 TYR C 106 -54.58 -123.33 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 538 DISTANCE = 6.12 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MLA B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MLA A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MLA C 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Ligand residues SEP D 6 through REMARK 800 CYS D 7 bound to SER D 5 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Ligand residues SEP E 6 through REMARK 800 CYS E 7 bound to SER E 5 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Ligand residues SEP F 6 through REMARK 800 CYS F 7 bound to SER F 5 DBREF 6A5Q B 1 246 UNP P31946 1433B_HUMAN 1 246 DBREF 6A5Q A 1 246 UNP P31946 1433B_HUMAN 1 246 DBREF 6A5Q C 1 246 UNP P31946 1433B_HUMAN 1 246 DBREF 6A5Q D -1 13 PDB 6A5Q 6A5Q -1 13 DBREF 6A5Q E -1 13 PDB 6A5Q 6A5Q -1 13 DBREF 6A5Q F -1 13 PDB 6A5Q 6A5Q -1 13 SEQADV 6A5Q GLY B -3 UNP P31946 EXPRESSION TAG SEQADV 6A5Q PRO B -2 UNP P31946 EXPRESSION TAG SEQADV 6A5Q GLY B -1 UNP P31946 EXPRESSION TAG SEQADV 6A5Q SER B 0 UNP P31946 EXPRESSION TAG SEQADV 6A5Q GLY A -3 UNP P31946 EXPRESSION TAG SEQADV 6A5Q PRO A -2 UNP P31946 EXPRESSION TAG SEQADV 6A5Q GLY A -1 UNP P31946 EXPRESSION TAG SEQADV 6A5Q SER A 0 UNP P31946 EXPRESSION TAG SEQADV 6A5Q GLY C -3 UNP P31946 EXPRESSION TAG SEQADV 6A5Q PRO C -2 UNP P31946 EXPRESSION TAG SEQADV 6A5Q GLY C -1 UNP P31946 EXPRESSION TAG SEQADV 6A5Q SER C 0 UNP P31946 EXPRESSION TAG SEQRES 1 B 250 GLY PRO GLY SER MET THR MET ASP LYS SER GLU LEU VAL SEQRES 2 B 250 GLN LYS ALA LYS LEU ALA GLU GLN ALA GLU ARG TYR ASP SEQRES 3 B 250 ASP MET ALA ALA ALA MET LYS ALA VAL THR GLU GLN GLY SEQRES 4 B 250 HIS GLU LEU SER ASN GLU GLU ARG ASN LEU LEU SER VAL SEQRES 5 B 250 ALA TYR LYS ASN VAL VAL GLY ALA ARG ARG SER SER TRP SEQRES 6 B 250 ARG VAL ILE SER SER ILE GLU GLN LYS THR GLU ARG ASN SEQRES 7 B 250 GLU LYS LYS GLN GLN MET GLY LYS GLU TYR ARG GLU LYS SEQRES 8 B 250 ILE GLU ALA GLU LEU GLN ASP ILE CYS ASN ASP VAL LEU SEQRES 9 B 250 GLU LEU LEU ASP LYS TYR LEU ILE PRO ASN ALA THR GLN SEQRES 10 B 250 PRO GLU SER LYS VAL PHE TYR LEU LYS MET LYS GLY ASP SEQRES 11 B 250 TYR PHE ARG TYR LEU SER GLU VAL ALA SER GLY ASP ASN SEQRES 12 B 250 LYS GLN THR THR VAL SER ASN SER GLN GLN ALA TYR GLN SEQRES 13 B 250 GLU ALA PHE GLU ILE SER LYS LYS GLU MET GLN PRO THR SEQRES 14 B 250 HIS PRO ILE ARG LEU GLY LEU ALA LEU ASN PHE SER VAL SEQRES 15 B 250 PHE TYR TYR GLU ILE LEU ASN SER PRO GLU LYS ALA CYS SEQRES 16 B 250 SER LEU ALA LYS THR ALA PHE ASP GLU ALA ILE ALA GLU SEQRES 17 B 250 LEU ASP THR LEU ASN GLU GLU SER TYR LYS ASP SER THR SEQRES 18 B 250 LEU ILE MET GLN LEU LEU ARG ASP ASN LEU THR LEU TRP SEQRES 19 B 250 THR SER GLU ASN GLN GLY ASP GLU GLY ASP ALA GLY GLU SEQRES 20 B 250 GLY GLU ASN SEQRES 1 A 250 GLY PRO GLY SER MET THR MET ASP LYS SER GLU LEU VAL SEQRES 2 A 250 GLN LYS ALA LYS LEU ALA GLU GLN ALA GLU ARG TYR ASP SEQRES 3 A 250 ASP MET ALA ALA ALA MET LYS ALA VAL THR GLU GLN GLY SEQRES 4 A 250 HIS GLU LEU SER ASN GLU GLU ARG ASN LEU LEU SER VAL SEQRES 5 A 250 ALA TYR LYS ASN VAL VAL GLY ALA ARG ARG SER SER TRP SEQRES 6 A 250 ARG VAL ILE SER SER ILE GLU GLN LYS THR GLU ARG ASN SEQRES 7 A 250 GLU LYS LYS GLN GLN MET GLY LYS GLU TYR ARG GLU LYS SEQRES 8 A 250 ILE GLU ALA GLU LEU GLN ASP ILE CYS ASN ASP VAL LEU SEQRES 9 A 250 GLU LEU LEU ASP LYS TYR LEU ILE PRO ASN ALA THR GLN SEQRES 10 A 250 PRO GLU SER LYS VAL PHE TYR LEU LYS MET LYS GLY ASP SEQRES 11 A 250 TYR PHE ARG TYR LEU SER GLU VAL ALA SER GLY ASP ASN SEQRES 12 A 250 LYS GLN THR THR VAL SER ASN SER GLN GLN ALA TYR GLN SEQRES 13 A 250 GLU ALA PHE GLU ILE SER LYS LYS GLU MET GLN PRO THR SEQRES 14 A 250 HIS PRO ILE ARG LEU GLY LEU ALA LEU ASN PHE SER VAL SEQRES 15 A 250 PHE TYR TYR GLU ILE LEU ASN SER PRO GLU LYS ALA CYS SEQRES 16 A 250 SER LEU ALA LYS THR ALA PHE ASP GLU ALA ILE ALA GLU SEQRES 17 A 250 LEU ASP THR LEU ASN GLU GLU SER TYR LYS ASP SER THR SEQRES 18 A 250 LEU ILE MET GLN LEU LEU ARG ASP ASN LEU THR LEU TRP SEQRES 19 A 250 THR SER GLU ASN GLN GLY ASP GLU GLY ASP ALA GLY GLU SEQRES 20 A 250 GLY GLU ASN SEQRES 1 C 250 GLY PRO GLY SER MET THR MET ASP LYS SER GLU LEU VAL SEQRES 2 C 250 GLN LYS ALA LYS LEU ALA GLU GLN ALA GLU ARG TYR ASP SEQRES 3 C 250 ASP MET ALA ALA ALA MET LYS ALA VAL THR GLU GLN GLY SEQRES 4 C 250 HIS GLU LEU SER ASN GLU GLU ARG ASN LEU LEU SER VAL SEQRES 5 C 250 ALA TYR LYS ASN VAL VAL GLY ALA ARG ARG SER SER TRP SEQRES 6 C 250 ARG VAL ILE SER SER ILE GLU GLN LYS THR GLU ARG ASN SEQRES 7 C 250 GLU LYS LYS GLN GLN MET GLY LYS GLU TYR ARG GLU LYS SEQRES 8 C 250 ILE GLU ALA GLU LEU GLN ASP ILE CYS ASN ASP VAL LEU SEQRES 9 C 250 GLU LEU LEU ASP LYS TYR LEU ILE PRO ASN ALA THR GLN SEQRES 10 C 250 PRO GLU SER LYS VAL PHE TYR LEU LYS MET LYS GLY ASP SEQRES 11 C 250 TYR PHE ARG TYR LEU SER GLU VAL ALA SER GLY ASP ASN SEQRES 12 C 250 LYS GLN THR THR VAL SER ASN SER GLN GLN ALA TYR GLN SEQRES 13 C 250 GLU ALA PHE GLU ILE SER LYS LYS GLU MET GLN PRO THR SEQRES 14 C 250 HIS PRO ILE ARG LEU GLY LEU ALA LEU ASN PHE SER VAL SEQRES 15 C 250 PHE TYR TYR GLU ILE LEU ASN SER PRO GLU LYS ALA CYS SEQRES 16 C 250 SER LEU ALA LYS THR ALA PHE ASP GLU ALA ILE ALA GLU SEQRES 17 C 250 LEU ASP THR LEU ASN GLU GLU SER TYR LYS ASP SER THR SEQRES 18 C 250 LEU ILE MET GLN LEU LEU ARG ASP ASN LEU THR LEU TRP SEQRES 19 C 250 THR SER GLU ASN GLN GLY ASP GLU GLY ASP ALA GLY GLU SEQRES 20 C 250 GLY GLU ASN SEQRES 1 D 15 LEU VAL GLY VAL THR SER SER SEP CYS PRO ALA ASP LEU SEQRES 2 D 15 THR GLN SEQRES 1 E 15 LEU VAL GLY VAL THR SER SER SEP CYS PRO ALA ASP LEU SEQRES 2 E 15 THR GLN SEQRES 1 F 15 LEU VAL GLY VAL THR SER SER SEP CYS PRO ALA ASP LEU SEQRES 2 F 15 THR GLN HET SEP D 6 10 HET SEP E 6 10 HET SEP F 6 10 HET MLA B 301 7 HET MLA A 301 7 HET MLA C 301 7 HETNAM SEP PHOSPHOSERINE HETNAM MLA MALONIC ACID HETSYN SEP PHOSPHONOSERINE HETSYN MLA DICARBOXYLIC ACID C3; PROPANEDIOLIC ACID; HETSYN 2 MLA METHANEDICARBOXYLIC ACID FORMUL 4 SEP 3(C3 H8 N O6 P) FORMUL 7 MLA 3(C3 H4 O4) FORMUL 10 HOH *434(H2 O) HELIX 1 AA1 ASP B 4 ALA B 18 1 15 HELIX 2 AA2 ARG B 20 GLN B 34 1 15 HELIX 3 AA3 SER B 39 LYS B 70 1 32 HELIX 4 AA4 ASN B 74 TYR B 106 1 33 HELIX 5 AA5 TYR B 106 ALA B 111 1 6 HELIX 6 AA6 GLN B 113 ALA B 135 1 23 HELIX 7 AA7 SER B 136 MET B 162 1 27 HELIX 8 AA8 HIS B 166 ILE B 183 1 18 HELIX 9 AA9 SER B 186 GLU B 204 1 19 HELIX 10 AB1 LEU B 205 LEU B 208 5 4 HELIX 11 AB2 ASN B 209 SER B 232 1 24 HELIX 12 AB3 ASP A 4 ALA A 18 1 15 HELIX 13 AB4 ARG A 20 GLN A 34 1 15 HELIX 14 AB5 SER A 39 THR A 71 1 33 HELIX 15 AB6 ASN A 74 TYR A 106 1 33 HELIX 16 AB7 TYR A 106 ALA A 111 1 6 HELIX 17 AB8 GLN A 113 ALA A 135 1 23 HELIX 18 AB9 SER A 136 MET A 162 1 27 HELIX 19 AC1 HIS A 166 ILE A 183 1 18 HELIX 20 AC2 SER A 186 GLU A 204 1 19 HELIX 21 AC3 LEU A 205 LEU A 208 5 4 HELIX 22 AC4 SER A 212 GLU A 233 1 22 HELIX 23 AC5 ASP C 4 ALA C 18 1 15 HELIX 24 AC6 ARG C 20 GLN C 34 1 15 HELIX 25 AC7 SER C 39 GLN C 69 1 31 HELIX 26 AC8 GLN C 79 TYR C 106 1 28 HELIX 27 AC9 TYR C 106 ALA C 111 1 6 HELIX 28 AD1 GLN C 113 ALA C 135 1 23 HELIX 29 AD2 SER C 136 MET C 162 1 27 HELIX 30 AD3 HIS C 166 ILE C 183 1 18 HELIX 31 AD4 SER C 186 GLU C 204 1 19 HELIX 32 AD5 LEU C 205 LEU C 208 5 4 HELIX 33 AD6 ASN C 209 GLU C 233 1 25 LINK C SER D 5 N SEP D 6 1555 1555 1.33 LINK C SEP D 6 N CYS D 7 1555 1555 1.33 LINK C SER E 5 N SEP E 6 1555 1555 1.33 LINK C SEP E 6 N CYS E 7 1555 1555 1.32 LINK C SER F 5 N SEP F 6 1555 1555 1.33 LINK C SEP F 6 N CYS F 7 1555 1555 1.33 SITE 1 AC1 7 PHE B 198 THR B 217 MET B 220 GLN B 221 SITE 2 AC1 7 ARG B 224 HOH B 421 TYR C 213 SITE 1 AC2 7 PHE A 198 THR A 217 MET A 220 GLN A 221 SITE 2 AC2 7 ARG A 224 HOH A 415 TYR B 213 SITE 1 AC3 7 TYR A 213 PHE C 198 THR C 217 MET C 220 SITE 2 AC3 7 GLN C 221 ARG C 224 HOH C 410 SITE 1 AC4 16 LYS C 51 ARG C 58 ARG C 129 TYR C 130 SITE 2 AC4 16 GLY C 171 LEU C 174 ASN C 175 SER D 5 SITE 3 AC4 16 PRO D 8 ALA D 9 LEU D 11 HOH D 102 SITE 4 AC4 16 HOH D 103 HOH D 104 HOH D 105 HOH D 106 SITE 1 AC5 16 LYS B 51 ARG B 58 ARG B 129 TYR B 130 SITE 2 AC5 16 GLY B 171 LEU B 174 ASN B 175 LEU B 222 SITE 3 AC5 16 HOH B 477 SER E 5 PRO E 8 ALA E 9 SITE 4 AC5 16 HOH E 102 HOH E 104 HOH E 105 HOH E 108 SITE 1 AC6 17 LYS A 51 ARG A 58 ARG A 129 TYR A 130 SITE 2 AC6 17 GLY A 171 LEU A 174 ASN A 175 LEU A 222 SITE 3 AC6 17 HOH A 418 SER F 5 PRO F 8 ALA F 9 SITE 4 AC6 17 LEU F 11 HOH F 101 HOH F 103 HOH F 104 SITE 5 AC6 17 HOH F 105 CRYST1 85.170 85.170 209.600 90.00 90.00 120.00 P 32 2 1 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011741 0.006779 0.000000 0.00000 SCALE2 0.000000 0.013558 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004771 0.00000