HEADER MEMBRANE PROTEIN 11-JUL-18 6A94 TITLE CRYSTAL STRUCTURE OF 5-HT2AR IN COMPLEX WITH ZOTEPINE COMPND MOL_ID: 1; COMPND 2 MOLECULE: 5-HYDROXYTRYPTAMINE RECEPTOR 2A,SOLUBLE CYTOCHROME B562; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: 5-HT-2A,SEROTONIN RECEPTOR 2A,CYTOCHROME B-562; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS, ESCHERICHIA COLI; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606, 562; SOURCE 5 GENE: HTR2A, HTR2, CYBC; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 7108 KEYWDS RECEPTOR, MEMBRANE PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR T.K.KIMURA,H.ASADA,A.INOUE,F.M.N.KADJI,D.IM,C.MORI,T.ARAKAWA, AUTHOR 2 K.HIRATA,Y.NOMURA,N.NOMURA,J.AOKI,S.IWATA,T.SHIMAMURA REVDAT 3 22-NOV-23 6A94 1 REMARK REVDAT 2 20-NOV-19 6A94 1 JRNL REVDAT 1 13-FEB-19 6A94 0 JRNL AUTH K.T.KIMURA,H.ASADA,A.INOUE,F.M.N.KADJI,D.IM,C.MORI, JRNL AUTH 2 T.ARAKAWA,K.HIRATA,Y.NOMURA,N.NOMURA,J.AOKI,S.IWATA, JRNL AUTH 3 T.SHIMAMURA JRNL TITL STRUCTURES OF THE 5-HT2ARECEPTOR IN COMPLEX WITH THE JRNL TITL 2 ANTIPSYCHOTICS RISPERIDONE AND ZOTEPINE. JRNL REF NAT.STRUCT.MOL.BIOL. V. 26 121 2019 JRNL REFN ESSN 1545-9985 JRNL PMID 30723326 JRNL DOI 10.1038/S41594-018-0180-Z REMARK 2 REMARK 2 RESOLUTION. 2.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.13_2998) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.82 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 2.040 REMARK 3 COMPLETENESS FOR RANGE (%) : 86.7 REMARK 3 NUMBER OF REFLECTIONS : 21132 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.238 REMARK 3 R VALUE (WORKING SET) : 0.236 REMARK 3 FREE R VALUE : 0.269 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.040 REMARK 3 FREE R VALUE TEST SET COUNT : 1064 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.8281 - 5.7966 1.00 3022 167 0.2331 0.2775 REMARK 3 2 5.7966 - 4.6023 1.00 2879 154 0.2316 0.2418 REMARK 3 3 4.6023 - 4.0210 1.00 2907 154 0.2059 0.2194 REMARK 3 4 4.0210 - 3.6535 1.00 2892 153 0.2276 0.2533 REMARK 3 5 3.6535 - 3.3917 1.00 2870 146 0.2429 0.2917 REMARK 3 6 3.3917 - 3.1918 0.91 2577 145 0.2691 0.3449 REMARK 3 7 3.1918 - 3.0320 0.67 1900 99 0.2633 0.2683 REMARK 3 8 3.0320 - 2.9000 0.35 1021 46 0.2683 0.3687 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.350 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.380 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 5996 REMARK 3 ANGLE : 0.629 8141 REMARK 3 CHIRALITY : 0.040 967 REMARK 3 PLANARITY : 0.004 978 REMARK 3 DIHEDRAL : 12.124 3606 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 69 THROUGH 144 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.2272 4.1444 70.4427 REMARK 3 T TENSOR REMARK 3 T11: 0.3780 T22: 1.4088 REMARK 3 T33: 0.8934 T12: -0.0245 REMARK 3 T13: 0.1301 T23: -0.5492 REMARK 3 L TENSOR REMARK 3 L11: 5.2709 L22: 0.9383 REMARK 3 L33: 0.6822 L12: -0.7377 REMARK 3 L13: -0.6509 L23: -0.2668 REMARK 3 S TENSOR REMARK 3 S11: 0.0612 S12: -0.9135 S13: 0.2584 REMARK 3 S21: 0.2306 S22: 0.0327 S23: 0.0778 REMARK 3 S31: -0.0590 S32: -0.0080 S33: -0.0892 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND ((RESID 145 THROUGH 265 ) OR (RESID REMARK 3 1001 THROUGH 1106 ) OR (RESID 313 THROUGH 348 )) REMARK 3 ORIGIN FOR THE GROUP (A): 42.2713 -2.0175 52.9519 REMARK 3 T TENSOR REMARK 3 T11: 0.2065 T22: -0.0209 REMARK 3 T33: 0.2395 T12: 0.0002 REMARK 3 T13: 0.0585 T23: 0.0322 REMARK 3 L TENSOR REMARK 3 L11: 0.5313 L22: 0.6859 REMARK 3 L33: 0.9900 L12: 0.2828 REMARK 3 L13: 0.1662 L23: -0.0408 REMARK 3 S TENSOR REMARK 3 S11: 0.0900 S12: -0.1995 S13: 0.1264 REMARK 3 S21: 0.1806 S22: 0.0871 S23: 0.1949 REMARK 3 S31: -0.0994 S32: -0.5392 S33: 0.1145 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 349 THROUGH 399 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.9273 -3.4067 69.0742 REMARK 3 T TENSOR REMARK 3 T11: 0.3325 T22: 1.2550 REMARK 3 T33: 0.6197 T12: -0.1530 REMARK 3 T13: 0.1165 T23: -0.0277 REMARK 3 L TENSOR REMARK 3 L11: 5.4240 L22: 3.2623 REMARK 3 L33: 1.2416 L12: 0.3031 REMARK 3 L13: -1.7701 L23: -0.3623 REMARK 3 S TENSOR REMARK 3 S11: 0.0976 S12: -0.9613 S13: 0.2700 REMARK 3 S21: 0.2463 S22: -0.0433 S23: 0.3860 REMARK 3 S31: 0.0018 S32: 0.0369 S33: -0.0303 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 72 THROUGH 144 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.1056 -2.2468 28.0341 REMARK 3 T TENSOR REMARK 3 T11: 0.2686 T22: 0.7100 REMARK 3 T33: 0.3050 T12: -0.0933 REMARK 3 T13: 0.0654 T23: 0.0153 REMARK 3 L TENSOR REMARK 3 L11: 4.5020 L22: 2.4249 REMARK 3 L33: 1.4780 L12: -0.7884 REMARK 3 L13: -0.7372 L23: 0.4001 REMARK 3 S TENSOR REMARK 3 S11: -0.1830 S12: 0.6229 S13: 0.2863 REMARK 3 S21: -0.0261 S22: 0.1932 S23: 0.1557 REMARK 3 S31: 0.2922 S32: -0.3252 S33: 0.0400 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 145 THROUGH 216 ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.6896 12.5949 19.7663 REMARK 3 T TENSOR REMARK 3 T11: 0.4393 T22: 1.1694 REMARK 3 T33: 0.9017 T12: 0.0116 REMARK 3 T13: 0.0268 T23: 0.4164 REMARK 3 L TENSOR REMARK 3 L11: 4.7547 L22: 3.5089 REMARK 3 L33: 2.8993 L12: 2.1441 REMARK 3 L13: -3.0565 L23: -0.5954 REMARK 3 S TENSOR REMARK 3 S11: 0.2257 S12: 0.5607 S13: 1.0591 REMARK 3 S21: -0.1535 S22: -0.0432 S23: 0.0299 REMARK 3 S31: -0.3028 S32: -0.1030 S33: -0.1977 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND ((RESID 217 THROUGH 265 ) OR (RESID REMARK 3 1001 THROUGH 1018 )) REMARK 3 ORIGIN FOR THE GROUP (A): 36.3006 5.7324 6.7995 REMARK 3 T TENSOR REMARK 3 T11: 0.5046 T22: 1.6629 REMARK 3 T33: 0.8462 T12: -0.0366 REMARK 3 T13: 0.2037 T23: 0.3602 REMARK 3 L TENSOR REMARK 3 L11: 2.0913 L22: 0.1008 REMARK 3 L33: 0.2568 L12: 0.0108 REMARK 3 L13: -0.6450 L23: 0.0748 REMARK 3 S TENSOR REMARK 3 S11: -0.0411 S12: 0.4215 S13: 0.0897 REMARK 3 S21: -0.1100 S22: 0.2084 S23: 0.1475 REMARK 3 S31: -0.0167 S32: -0.1929 S33: -0.0836 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1019 THROUGH 1083 ) REMARK 3 ORIGIN FOR THE GROUP (A): 77.3313 11.2200 0.7620 REMARK 3 T TENSOR REMARK 3 T11: 0.5063 T22: 1.6768 REMARK 3 T33: 0.9104 T12: -0.0012 REMARK 3 T13: 0.2298 T23: -0.1231 REMARK 3 L TENSOR REMARK 3 L11: 9.8327 L22: 7.2245 REMARK 3 L33: 0.7784 L12: -0.1414 REMARK 3 L13: -1.7013 L23: -1.8451 REMARK 3 S TENSOR REMARK 3 S11: 0.3407 S12: 0.1202 S13: 0.9797 REMARK 3 S21: -0.1615 S22: 0.0117 S23: -0.3207 REMARK 3 S31: -0.0594 S32: -0.0383 S33: -0.3371 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND ((RESID 1084 THROUGH 1106 ) OR (RESID REMARK 3 313 THROUGH 401 )) REMARK 3 ORIGIN FOR THE GROUP (A): 38.7504 -2.3872 15.4287 REMARK 3 T TENSOR REMARK 3 T11: 0.3458 T22: 1.4091 REMARK 3 T33: 0.4792 T12: 0.0134 REMARK 3 T13: 0.0589 T23: 0.0801 REMARK 3 L TENSOR REMARK 3 L11: 0.0377 L22: 0.8300 REMARK 3 L33: 0.2524 L12: 0.1764 REMARK 3 L13: 0.0668 L23: 0.1941 REMARK 3 S TENSOR REMARK 3 S11: -0.0512 S12: 0.8421 S13: 0.3274 REMARK 3 S21: -0.2075 S22: -0.0339 S23: -0.1344 REMARK 3 S31: 0.0148 S32: -0.3189 S33: 0.0929 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6A94 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 20-JUL-18. REMARK 100 THE DEPOSITION ID IS D_1300008337. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-APR-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL32XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX225-HS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 30115 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 45.822 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 86.7 REMARK 200 DATA REDUNDANCY : 21.10 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.4800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.71 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.86 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2RH1 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.80 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.22 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM MES, PH 6.0, OR HEPES, PH 7.0, REMARK 280 30% (V/V) PEG400, 100 MM LI-CHLORIDE, NA-ACETATE, OR 14 OTHER REMARK 280 VARIOUS SALTS FROM STOCKOPTIONS SALT (HAMPTON RESEARCH), LIPIDIC REMARK 280 CUBIC PHASE, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 139.59000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 21.11000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 139.59000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 21.11000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 67 REMARK 465 GLY A 68 REMARK 465 LYS A 400 REMARK 465 GLU A 401 REMARK 465 ASN A 402 REMARK 465 LYS A 403 REMARK 465 GLY B 67 REMARK 465 GLY B 68 REMARK 465 THR B 69 REMARK 465 HIS B 70 REMARK 465 LEU B 71 REMARK 465 ILE B 181 REMARK 465 HIS B 182 REMARK 465 HIS B 183 REMARK 465 SER B 184 REMARK 465 ARG B 185 REMARK 465 PHE B 186 REMARK 465 ASN B 187 REMARK 465 SER B 1062 REMARK 465 GLY B 1063 REMARK 465 SER B 1064 REMARK 465 ASN B 402 REMARK 465 LYS B 403 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 SG CYS B 397 O2 PLM B 3002 1.84 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 105 47.09 -99.64 REMARK 500 PHE A 243 -55.10 -126.17 REMARK 500 LEU B 105 46.74 -100.40 REMARK 500 PHE B 243 -55.40 -125.83 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 PLM B 3002 REMARK 610 A6L B 3004 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A3004 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 182 NE2 REMARK 620 2 HIS A 183 NE2 110.4 REMARK 620 3 GLU A 264 OE2 105.9 87.5 REMARK 620 4 GLU A 318 OE2 145.5 86.0 104.9 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZOT A 3001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CLR A 3002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 1PE A 3003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 3004 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZOT B 3001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PLM B 3002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CLR B 3003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue A6L B 3004 DBREF 6A94 A 70 265 UNP P28223 5HT2A_HUMAN 70 265 DBREF 6A94 A 1001 1040 UNP P0ABE7 C562_ECOLX 23 62 DBREF 6A94 A 1066 1106 UNP P0ABE7 C562_ECOLX 88 128 DBREF 6A94 A 313 403 UNP P28223 5HT2A_HUMAN 313 403 DBREF 6A94 B 70 265 UNP P28223 5HT2A_HUMAN 70 265 DBREF 6A94 B 1001 1040 UNP P0ABE7 C562_ECOLX 23 62 DBREF 6A94 B 1066 1106 UNP P0ABE7 C562_ECOLX 88 128 DBREF 6A94 B 313 403 UNP P28223 5HT2A_HUMAN 313 403 SEQADV 6A94 GLY A 67 UNP P28223 EXPRESSION TAG SEQADV 6A94 GLY A 68 UNP P28223 EXPRESSION TAG SEQADV 6A94 THR A 69 UNP P28223 EXPRESSION TAG SEQADV 6A94 LYS A 162 UNP P28223 SER 162 ENGINEERED MUTATION SEQADV 6A94 TRP A 164 UNP P28223 MET 164 ENGINEERED MUTATION SEQADV 6A94 TRP A 1007 UNP P0ABE7 MET 29 ENGINEERED MUTATION SEQADV 6A94 GLY A 1041 UNP P0ABE7 LINKER SEQADV 6A94 SER A 1042 UNP P0ABE7 LINKER SEQADV 6A94 GLY A 1043 UNP P0ABE7 LINKER SEQADV 6A94 SER A 1044 UNP P0ABE7 LINKER SEQADV 6A94 GLY A 1045 UNP P0ABE7 LINKER SEQADV 6A94 ILE A 1098 UNP P0ABE7 ARG 120 ENGINEERED MUTATION SEQADV 6A94 ILE A 1102 UNP P0ABE7 HIS 124 ENGINEERED MUTATION SEQADV 6A94 GLY A 1106 UNP P0ABE7 ARG 128 ENGINEERED MUTATION SEQADV 6A94 GLY B 67 UNP P28223 EXPRESSION TAG SEQADV 6A94 GLY B 68 UNP P28223 EXPRESSION TAG SEQADV 6A94 THR B 69 UNP P28223 EXPRESSION TAG SEQADV 6A94 LYS B 162 UNP P28223 SER 162 ENGINEERED MUTATION SEQADV 6A94 TRP B 164 UNP P28223 MET 164 ENGINEERED MUTATION SEQADV 6A94 TRP B 1007 UNP P0ABE7 MET 29 ENGINEERED MUTATION SEQADV 6A94 GLY B 1041 UNP P0ABE7 LINKER SEQADV 6A94 SER B 1062 UNP P0ABE7 LINKER SEQADV 6A94 GLY B 1063 UNP P0ABE7 LINKER SEQADV 6A94 SER B 1064 UNP P0ABE7 LINKER SEQADV 6A94 GLY B 1065 UNP P0ABE7 LINKER SEQADV 6A94 ILE B 1098 UNP P0ABE7 ARG 120 ENGINEERED MUTATION SEQADV 6A94 ILE B 1102 UNP P0ABE7 HIS 124 ENGINEERED MUTATION SEQADV 6A94 GLY B 1106 UNP P0ABE7 ARG 128 ENGINEERED MUTATION SEQRES 1 A 376 GLY GLY THR HIS LEU GLN GLU LYS ASN TRP SER ALA LEU SEQRES 2 A 376 LEU THR ALA VAL VAL ILE ILE LEU THR ILE ALA GLY ASN SEQRES 3 A 376 ILE LEU VAL ILE MET ALA VAL SER LEU GLU LYS LYS LEU SEQRES 4 A 376 GLN ASN ALA THR ASN TYR PHE LEU MET SER LEU ALA ILE SEQRES 5 A 376 ALA ASP MET LEU LEU GLY PHE LEU VAL MET PRO VAL SER SEQRES 6 A 376 MET LEU THR ILE LEU TYR GLY TYR ARG TRP PRO LEU PRO SEQRES 7 A 376 SER LYS LEU CYS ALA VAL TRP ILE TYR LEU ASP VAL LEU SEQRES 8 A 376 PHE SER THR ALA LYS ILE TRP HIS LEU CYS ALA ILE SER SEQRES 9 A 376 LEU ASP ARG TYR VAL ALA ILE GLN ASN PRO ILE HIS HIS SEQRES 10 A 376 SER ARG PHE ASN SER ARG THR LYS ALA PHE LEU LYS ILE SEQRES 11 A 376 ILE ALA VAL TRP THR ILE SER VAL GLY ILE SER MET PRO SEQRES 12 A 376 ILE PRO VAL PHE GLY LEU GLN ASP ASP SER LYS VAL PHE SEQRES 13 A 376 LYS GLU GLY SER CYS LEU LEU ALA ASP ASP ASN PHE VAL SEQRES 14 A 376 LEU ILE GLY SER PHE VAL SER PHE PHE ILE PRO LEU THR SEQRES 15 A 376 ILE MET VAL ILE THR TYR PHE LEU THR ILE LYS SER LEU SEQRES 16 A 376 GLN LYS GLU ALA ALA ASP LEU GLU ASP ASN TRP GLU THR SEQRES 17 A 376 LEU ASN ASP ASN LEU LYS VAL ILE GLU LYS ALA ASP ASN SEQRES 18 A 376 ALA ALA GLN VAL LYS ASP ALA LEU THR LYS MET ARG ALA SEQRES 19 A 376 ALA ALA LEU ASP ALA GLY SER GLY SER GLY ASP ILE LEU SEQRES 20 A 376 VAL GLY GLN ILE ASP ASP ALA LEU LYS LEU ALA ASN GLU SEQRES 21 A 376 GLY LYS VAL LYS GLU ALA GLN ALA ALA ALA GLU GLN LEU SEQRES 22 A 376 LYS THR THR ILE ASN ALA TYR ILE GLN LYS TYR GLY GLN SEQRES 23 A 376 SER ILE SER ASN GLU GLN LYS ALA CYS LYS VAL LEU GLY SEQRES 24 A 376 ILE VAL PHE PHE LEU PHE VAL VAL MET TRP CYS PRO PHE SEQRES 25 A 376 PHE ILE THR ASN ILE MET ALA VAL ILE CYS LYS GLU SER SEQRES 26 A 376 CYS ASN GLU ASP VAL ILE GLY ALA LEU LEU ASN VAL PHE SEQRES 27 A 376 VAL TRP ILE GLY TYR LEU SER SER ALA VAL ASN PRO LEU SEQRES 28 A 376 VAL TYR THR LEU PHE ASN LYS THR TYR ARG SER ALA PHE SEQRES 29 A 376 SER ARG TYR ILE GLN CYS GLN TYR LYS GLU ASN LYS SEQRES 1 B 376 GLY GLY THR HIS LEU GLN GLU LYS ASN TRP SER ALA LEU SEQRES 2 B 376 LEU THR ALA VAL VAL ILE ILE LEU THR ILE ALA GLY ASN SEQRES 3 B 376 ILE LEU VAL ILE MET ALA VAL SER LEU GLU LYS LYS LEU SEQRES 4 B 376 GLN ASN ALA THR ASN TYR PHE LEU MET SER LEU ALA ILE SEQRES 5 B 376 ALA ASP MET LEU LEU GLY PHE LEU VAL MET PRO VAL SER SEQRES 6 B 376 MET LEU THR ILE LEU TYR GLY TYR ARG TRP PRO LEU PRO SEQRES 7 B 376 SER LYS LEU CYS ALA VAL TRP ILE TYR LEU ASP VAL LEU SEQRES 8 B 376 PHE SER THR ALA LYS ILE TRP HIS LEU CYS ALA ILE SER SEQRES 9 B 376 LEU ASP ARG TYR VAL ALA ILE GLN ASN PRO ILE HIS HIS SEQRES 10 B 376 SER ARG PHE ASN SER ARG THR LYS ALA PHE LEU LYS ILE SEQRES 11 B 376 ILE ALA VAL TRP THR ILE SER VAL GLY ILE SER MET PRO SEQRES 12 B 376 ILE PRO VAL PHE GLY LEU GLN ASP ASP SER LYS VAL PHE SEQRES 13 B 376 LYS GLU GLY SER CYS LEU LEU ALA ASP ASP ASN PHE VAL SEQRES 14 B 376 LEU ILE GLY SER PHE VAL SER PHE PHE ILE PRO LEU THR SEQRES 15 B 376 ILE MET VAL ILE THR TYR PHE LEU THR ILE LYS SER LEU SEQRES 16 B 376 GLN LYS GLU ALA ALA ASP LEU GLU ASP ASN TRP GLU THR SEQRES 17 B 376 LEU ASN ASP ASN LEU LYS VAL ILE GLU LYS ALA ASP ASN SEQRES 18 B 376 ALA ALA GLN VAL LYS ASP ALA LEU THR LYS MET ARG ALA SEQRES 19 B 376 ALA ALA LEU ASP ALA GLY SER GLY SER GLY ASP ILE LEU SEQRES 20 B 376 VAL GLY GLN ILE ASP ASP ALA LEU LYS LEU ALA ASN GLU SEQRES 21 B 376 GLY LYS VAL LYS GLU ALA GLN ALA ALA ALA GLU GLN LEU SEQRES 22 B 376 LYS THR THR ILE ASN ALA TYR ILE GLN LYS TYR GLY GLN SEQRES 23 B 376 SER ILE SER ASN GLU GLN LYS ALA CYS LYS VAL LEU GLY SEQRES 24 B 376 ILE VAL PHE PHE LEU PHE VAL VAL MET TRP CYS PRO PHE SEQRES 25 B 376 PHE ILE THR ASN ILE MET ALA VAL ILE CYS LYS GLU SER SEQRES 26 B 376 CYS ASN GLU ASP VAL ILE GLY ALA LEU LEU ASN VAL PHE SEQRES 27 B 376 VAL TRP ILE GLY TYR LEU SER SER ALA VAL ASN PRO LEU SEQRES 28 B 376 VAL TYR THR LEU PHE ASN LYS THR TYR ARG SER ALA PHE SEQRES 29 B 376 SER ARG TYR ILE GLN CYS GLN TYR LYS GLU ASN LYS HET ZOT A3001 22 HET CLR A3002 28 HET 1PE A3003 16 HET ZN A3004 1 HET ZOT B3001 22 HET PLM B3002 10 HET CLR B3003 28 HET A6L B3004 20 HETNAM ZOT 2-(3-CHLORANYLBENZO[B][1]BENZOTHIEPIN-5-YL)OXY-N,N- HETNAM 2 ZOT DIMETHYL-ETHANAMINE HETNAM CLR CHOLESTEROL HETNAM 1PE PENTAETHYLENE GLYCOL HETNAM ZN ZINC ION HETNAM PLM PALMITIC ACID HETNAM A6L 2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-ENOATE HETSYN 1PE PEG400 HETSYN A6L MONOOLEIN FORMUL 3 ZOT 2(C18 H18 CL N O S) FORMUL 4 CLR 2(C27 H46 O) FORMUL 5 1PE C10 H22 O6 FORMUL 6 ZN ZN 2+ FORMUL 8 PLM C16 H32 O2 FORMUL 10 A6L C21 H40 O4 HELIX 1 AA1 THR A 69 GLU A 102 1 34 HELIX 2 AA2 LYS A 103 GLN A 106 5 4 HELIX 3 AA3 ASN A 107 VAL A 127 1 21 HELIX 4 AA4 VAL A 127 TYR A 137 1 11 HELIX 5 AA5 SER A 145 GLN A 178 1 34 HELIX 6 AA6 SER A 188 MET A 208 1 21 HELIX 7 AA7 MET A 208 ASP A 217 1 10 HELIX 8 AA8 ASP A 231 PHE A 243 1 13 HELIX 9 AA9 PHE A 243 LYS A 1019 1 42 HELIX 10 AB1 ASN A 1022 SER A 1042 1 21 HELIX 11 AB2 ASP A 1066 GLU A 1081 1 16 HELIX 12 AB3 LYS A 1083 CYS A 349 1 61 HELIX 13 AB4 ASN A 354 ASN A 384 1 31 HELIX 14 AB5 ASN A 384 GLN A 396 1 13 HELIX 15 AB6 GLU B 73 GLU B 102 1 30 HELIX 16 AB7 LYS B 103 GLN B 106 5 4 HELIX 17 AB8 ASN B 107 VAL B 127 1 21 HELIX 18 AB9 VAL B 127 TYR B 137 1 11 HELIX 19 AC1 PRO B 144 ASN B 179 1 36 HELIX 20 AC2 ARG B 189 MET B 208 1 20 HELIX 21 AC3 MET B 208 ASP B 217 1 10 HELIX 22 AC4 ASP B 231 PHE B 243 1 13 HELIX 23 AC5 PHE B 243 LYS B 1019 1 42 HELIX 24 AC6 ASN B 1022 GLY B 1041 1 20 HELIX 25 AC7 ASP B 1066 GLU B 1081 1 16 HELIX 26 AC8 LYS B 1083 CYS B 349 1 61 HELIX 27 AC9 ASN B 354 ASN B 384 1 31 HELIX 28 AD1 ASN B 384 GLN B 396 1 13 SHEET 1 AA1 2 PHE A 222 LYS A 223 0 SHEET 2 AA1 2 SER A 226 CYS A 227 -1 O SER A 226 N LYS A 223 SHEET 1 AA2 2 PHE B 222 LYS B 223 0 SHEET 2 AA2 2 SER B 226 CYS B 227 -1 O SER B 226 N LYS B 223 SSBOND 1 CYS A 148 CYS A 227 1555 1555 2.03 SSBOND 2 CYS A 349 CYS A 353 1555 1555 2.03 SSBOND 3 CYS B 148 CYS B 227 1555 1555 2.04 SSBOND 4 CYS B 349 CYS B 353 1555 1555 2.03 LINK SG CYS B 397 C1 PLM B3002 1555 1555 1.78 LINK NE2 HIS A 182 ZN ZN A3004 1555 1555 2.11 LINK NE2 HIS A 183 ZN ZN A3004 1555 1555 2.14 LINK OE2 GLU A 264 ZN ZN A3004 1555 1555 1.88 LINK OE2 GLU A 318 ZN ZN A3004 1555 1555 1.92 SITE 1 AC1 10 ASP A 155 SER A 159 LEU A 229 VAL A 235 SITE 2 AC1 10 GLY A 238 SER A 242 TRP A 336 PHE A 339 SITE 3 AC1 10 PHE A 340 ASN A 343 SITE 1 AC2 9 TYR A 111 MET A 114 ILE A 118 LEU A 122 SITE 2 AC2 9 TYR A 153 PHE A 193 ILE A 196 TRP A 200 SITE 3 AC2 9 VAL A 204 SITE 1 AC3 8 LEU A 261 GLN A 262 ALA A 265 ILE A 315 SITE 2 AC3 8 SER A 316 GLN A 319 GLU A1004 ASN A1080 SITE 1 AC4 4 HIS A 182 HIS A 183 GLU A 264 GLU A 318 SITE 1 AC5 10 ASP B 155 VAL B 156 SER B 159 THR B 160 SITE 2 AC5 10 LEU B 229 VAL B 235 GLY B 238 SER B 242 SITE 3 AC5 10 PHE B 339 PHE B 340 SITE 1 AC6 4 ILE B 395 GLN B 396 CYS B 397 CLR B3003 SITE 1 AC7 4 ILE B 86 TYR B 394 TYR B 399 PLM B3002 SITE 1 AC8 3 THR A 253 LEU A 256 TYR B 399 CRYST1 279.180 42.220 91.710 90.00 92.16 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.003582 0.000000 0.000135 0.00000 SCALE2 0.000000 0.023685 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010912 0.00000