HEADER IMMUNE SYSTEM 11-JUL-18 6A97 TITLE CRYSTAL STRUCTURE OF MHC-LIKE MILL2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: MHC I-LIKE LEUKOCYTE 2 LONG FORM; COMPND 3 CHAIN: A, C; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: BETA-2-MICROGLOBULIN; COMPND 7 CHAIN: B, D; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: MILL2; SOURCE 6 EXPRESSION_SYSTEM: UNIDENTIFIED PLASMID; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 45202; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 10 ORGANISM_COMMON: MOUSE; SOURCE 11 ORGANISM_TAXID: 10090; SOURCE 12 GENE: B2M; SOURCE 13 EXPRESSION_SYSTEM: UNIDENTIFIED PLASMID; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 45202 KEYWDS MHC-LIKE, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR M.KAJIKAWA,T.OSE,K.MAENAKA REVDAT 1 05-DEC-18 6A97 0 JRNL AUTH M.KAJIKAWA,T.OSE,Y.FUKUNAGA,Y.OKABE,N.MATSUMOTO,K.YONEZAWA, JRNL AUTH 2 N.SHIMIZU,S.KOLLNBERGER,M.KASAHARA,K.MAENAKA JRNL TITL STRUCTURE OF MHC CLASS I-LIKE MILL2 REVEALS HEPARAN-SULFATE JRNL TITL 2 BINDING AND INTERDOMAIN FLEXIBILITY. JRNL REF NAT COMMUN V. 9 4330 2018 JRNL REFN ESSN 2041-1723 JRNL PMID 30337538 JRNL DOI 10.1038/S41467-018-06797-8 REMARK 2 REMARK 2 RESOLUTION. 2.15 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.15 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.82 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 63875 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.215 REMARK 3 R VALUE (WORKING SET) : 0.213 REMARK 3 FREE R VALUE : 0.245 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 3199 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 44.8262 - 6.1031 0.98 2798 139 0.2073 0.2669 REMARK 3 2 6.1031 - 4.8460 1.00 2736 142 0.1840 0.1975 REMARK 3 3 4.8460 - 4.2340 1.00 2678 145 0.1604 0.1952 REMARK 3 4 4.2340 - 3.8471 1.00 2653 160 0.1822 0.2405 REMARK 3 5 3.8471 - 3.5715 1.00 2649 146 0.2000 0.2274 REMARK 3 6 3.5715 - 3.3610 1.00 2648 144 0.2193 0.2241 REMARK 3 7 3.3610 - 3.1927 1.00 2644 144 0.2239 0.2149 REMARK 3 8 3.1927 - 3.0538 1.00 2644 132 0.2402 0.2876 REMARK 3 9 3.0538 - 2.9362 1.00 2635 130 0.2486 0.2606 REMARK 3 10 2.9362 - 2.8349 1.00 2657 131 0.2565 0.2720 REMARK 3 11 2.8349 - 2.7463 1.00 2620 144 0.2483 0.2671 REMARK 3 12 2.7463 - 2.6678 1.00 2626 138 0.2516 0.2962 REMARK 3 13 2.6678 - 2.5976 1.00 2626 125 0.2371 0.2627 REMARK 3 14 2.5976 - 2.5342 1.00 2638 143 0.2358 0.2801 REMARK 3 15 2.5342 - 2.4766 1.00 2601 147 0.2399 0.3045 REMARK 3 16 2.4766 - 2.4239 1.00 2607 139 0.2533 0.3071 REMARK 3 17 2.4239 - 2.3754 1.00 2618 140 0.2540 0.2800 REMARK 3 18 2.3754 - 2.3306 1.00 2589 148 0.2431 0.2927 REMARK 3 19 2.3306 - 2.2890 1.00 2613 130 0.2493 0.3045 REMARK 3 20 2.2890 - 2.2502 1.00 2639 139 0.2529 0.3038 REMARK 3 21 2.2502 - 2.2139 1.00 2614 145 0.2620 0.2908 REMARK 3 22 2.2139 - 2.1798 1.00 2612 114 0.2729 0.2808 REMARK 3 23 2.1798 - 2.1478 0.98 2531 134 0.2814 0.3304 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.250 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.640 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 5522 REMARK 3 ANGLE : 0.834 7487 REMARK 3 CHIRALITY : 0.031 845 REMARK 3 PLANARITY : 0.003 955 REMARK 3 DIHEDRAL : 14.220 2004 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 59.3493 25.4805 -29.2367 REMARK 3 T TENSOR REMARK 3 T11: 0.2696 T22: 0.3378 REMARK 3 T33: 0.3606 T12: -0.0175 REMARK 3 T13: -0.0162 T23: -0.0475 REMARK 3 L TENSOR REMARK 3 L11: 0.5867 L22: 0.5596 REMARK 3 L33: 1.3433 L12: -0.1158 REMARK 3 L13: 0.1731 L23: -0.6637 REMARK 3 S TENSOR REMARK 3 S11: 0.0624 S12: 0.1199 S13: -0.0134 REMARK 3 S21: -0.1893 S22: 0.0451 S23: -0.0118 REMARK 3 S31: 0.2756 S32: 0.0049 S33: -0.1071 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6A97 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 12-JUL-18. REMARK 100 THE DEPOSITION ID IS D_1300008369. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-OCT-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-17A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 270 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 63953 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.148 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 7.300 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 36.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.15 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.19 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.30 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.95 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.23 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M BIS-TRIS PROPANE HCL, 20% (W/V) REMARK 280 POLYETHYLENE GLYCOL 3350, 0.2 M SODIUM SULFATE, PH 8.5, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 44.81650 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 69.06150 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 46.74850 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 69.06150 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 44.81650 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 46.74850 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6360 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 34670 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -35.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -15 REMARK 465 SER A -14 REMARK 465 SER A -13 REMARK 465 ILE A -12 REMARK 465 GLN A -11 REMARK 465 GLY A -10 REMARK 465 PHE A -9 REMARK 465 LEU A -8 REMARK 465 ALA A -7 REMARK 465 ASP A -6 REMARK 465 VAL A -5 REMARK 465 GLU A -4 REMARK 465 VAL A -3 REMARK 465 HIS A -2 REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 SER A 1 REMARK 465 ARG A 2 REMARK 465 LEU A 3 REMARK 465 THR A 4 REMARK 465 ARG A 5 REMARK 465 LEU A 181 REMARK 465 GLN A 182 REMARK 465 ASP A 183 REMARK 465 VAL A 276 REMARK 465 MET B 0 REMARK 465 ASP B 98 REMARK 465 MET B 99 REMARK 465 MET C -15 REMARK 465 SER C -14 REMARK 465 SER C -13 REMARK 465 ILE C -12 REMARK 465 GLN C -11 REMARK 465 GLY C -10 REMARK 465 PHE C -9 REMARK 465 LEU C -8 REMARK 465 ALA C -7 REMARK 465 ASP C -6 REMARK 465 VAL C -5 REMARK 465 GLU C -4 REMARK 465 VAL C -3 REMARK 465 HIS C -2 REMARK 465 GLY C -1 REMARK 465 SER C 0 REMARK 465 SER C 1 REMARK 465 ARG C 2 REMARK 465 LEU C 3 REMARK 465 THR C 4 REMARK 465 ARG C 5 REMARK 465 LYS C 55 REMARK 465 GLY C 56 REMARK 465 HIS C 57 REMARK 465 GLY C 58 REMARK 465 GLY C 59 REMARK 465 ASN C 60 REMARK 465 GLU C 61 REMARK 465 THR C 62 REMARK 465 GLN C 87 REMARK 465 LYS C 88 REMARK 465 SER C 89 REMARK 465 GLN C 90 REMARK 465 GLU C 91 REMARK 465 GLU C 92 REMARK 465 GLY C 93 REMARK 465 LEU C 94 REMARK 465 HIS C 95 REMARK 465 LEU C 105 REMARK 465 LEU C 106 REMARK 465 SER C 107 REMARK 465 ASN C 108 REMARK 465 GLY C 109 REMARK 465 SER C 110 REMARK 465 THR C 111 REMARK 465 GLY C 121 REMARK 465 GLN C 122 REMARK 465 ASN C 123 REMARK 465 GLN C 129 REMARK 465 LYS C 130 REMARK 465 ASP C 137 REMARK 465 GLY C 138 REMARK 465 PRO C 139 REMARK 465 SER C 140 REMARK 465 THR C 141 REMARK 465 GLN C 142 REMARK 465 ALA C 175 REMARK 465 SER C 176 REMARK 465 LEU C 177 REMARK 465 ARG C 178 REMARK 465 ASN C 179 REMARK 465 GLY C 180 REMARK 465 LEU C 181 REMARK 465 GLN C 182 REMARK 465 ASP C 183 REMARK 465 THR C 184 REMARK 465 VAL C 276 REMARK 465 MET D 0 REMARK 465 MET D 99 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 19 CG CD OE1 OE2 REMARK 470 ILE A 54 CD1 REMARK 470 HIS A 57 CG ND1 CD2 CE1 NE2 REMARK 470 ARG A 178 CG CD NE CZ NH1 NH2 REMARK 470 TYR A 211 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 GLU B 16 CG CD OE1 OE2 REMARK 470 HIS B 34 CG ND1 CD2 CE1 NE2 REMARK 470 LYS B 44 CG CD CE NZ REMARK 470 GLU B 74 CG CD OE1 OE2 REMARK 470 ASP B 96 CG OD1 OD2 REMARK 470 ARG B 97 CG CD NE CZ NH1 NH2 REMARK 470 GLU C 19 CG CD OE1 OE2 REMARK 470 GLU C 22 CG CD OE1 OE2 REMARK 470 ARG C 65 CG CD NE CZ NH1 NH2 REMARK 470 GLU C 66 CG CD OE1 OE2 REMARK 470 GLU C 83 CG CD OE1 OE2 REMARK 470 ASN C 86 CG OD1 ND2 REMARK 470 PHE C 124 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ASP C 128 CG OD1 OD2 REMARK 470 GLN C 143 CG CD OE1 NE2 REMARK 470 ASN C 144 CG OD1 ND2 REMARK 470 LYS C 145 CG CD CE NZ REMARK 470 MET C 146 CG SD CE REMARK 470 PHE C 147 CG CD1 CD2 CE1 CE2 CZ REMARK 470 TRP C 148 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP C 148 CZ3 CH2 REMARK 470 LYS C 149 CG CD CE NZ REMARK 470 ASP C 156 CG OD1 OD2 REMARK 470 ASP C 163 CG OD1 OD2 REMARK 470 ASP C 164 CG OD1 OD2 REMARK 470 ILE C 165 CD1 REMARK 470 GLN C 171 CG CD OE1 NE2 REMARK 470 ARG C 172 CG CD NE CZ NH1 NH2 REMARK 470 TYR C 211 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 SER C 233 OG REMARK 470 GLU C 234 CG CD OE1 OE2 REMARK 470 ASP D 59 CG OD1 OD2 REMARK 470 TRP D 60 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP D 60 CZ3 CH2 REMARK 470 GLU D 89 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 302 O HOH A 351 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 19 -62.02 -98.91 REMARK 500 PHE A 124 -71.51 -128.92 REMARK 500 ASN A 179 66.73 -56.15 REMARK 500 PRO A 197 -166.37 -73.47 REMARK 500 TRP B 60 -8.06 76.93 REMARK 500 ASP B 96 -140.69 -131.59 REMARK 500 PHE C 37 -51.62 -125.69 REMARK 500 ARG C 45 -69.31 -120.89 REMARK 500 ALA C 64 -42.01 103.97 REMARK 500 TYR C 119 72.46 -117.35 REMARK 500 ASP C 164 -51.30 -120.62 REMARK 500 TYR C 196 141.06 -170.62 REMARK 500 ARG C 232 -155.96 -106.80 REMARK 500 ASP D 59 24.79 -75.30 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 C 301 DBREF 6A97 A -14 276 UNP Q8HWE5 Q8HWE5_MOUSE 30 320 DBREF 6A97 B 1 99 UNP P01887 B2MG_MOUSE 21 119 DBREF 6A97 C -14 276 UNP Q8HWE5 Q8HWE5_MOUSE 30 320 DBREF 6A97 D 1 99 UNP P01887 B2MG_MOUSE 21 119 SEQADV 6A97 MET A -15 UNP Q8HWE5 INITIATING METHIONINE SEQADV 6A97 MET B 0 UNP P01887 INITIATING METHIONINE SEQADV 6A97 MET C -15 UNP Q8HWE5 INITIATING METHIONINE SEQADV 6A97 MET D 0 UNP P01887 INITIATING METHIONINE SEQRES 1 A 292 MET SER SER ILE GLN GLY PHE LEU ALA ASP VAL GLU VAL SEQRES 2 A 292 HIS GLY SER SER ARG LEU THR ARG THR HIS THR LEU ARG SEQRES 3 A 292 TYR ASN VAL ARG ALA HIS SER LEU GLU GLY SER GLU LYS SEQRES 4 A 292 THR GLN LEU LEU VAL LEU ILE TYR VAL ASP GLU GLU LEU SEQRES 5 A 292 PHE LEU LYS TYR ASN GLY ASP SER ARG GLU THR GLU PRO SEQRES 6 A 292 LEU GLY CYS TRP ILE LYS GLY HIS GLY GLY ASN GLU THR SEQRES 7 A 292 CYS ALA ARG GLU THR ASN ASN LEU LEU LYS VAL GLU GLU SEQRES 8 A 292 LYS LEU ARG GLY MET MET ALA GLU VAL ILE ASN GLN LYS SEQRES 9 A 292 SER GLN GLU GLU GLY LEU HIS THR LEU GLN ALA THR LEU SEQRES 10 A 292 GLY CYS GLU LEU LEU SER ASN GLY SER THR ARG GLY PHE SEQRES 11 A 292 TRP HIS LEU GLY TYR ASP GLY GLN ASN PHE LEU THR PHE SEQRES 12 A 292 ASP GLN LYS THR LEU THR TRP THR VAL ASP GLY PRO SER SEQRES 13 A 292 THR GLN GLN ASN LYS MET PHE TRP LYS THR HIS ALA PRO SEQRES 14 A 292 ARG ALA ASP LEU VAL LYS THR PHE LEU ASP ASP ILE CYS SEQRES 15 A 292 PRO ALA HIS LEU GLN ARG TYR LEU ALA SER LEU ARG ASN SEQRES 16 A 292 GLY LEU GLN ASP THR GLY PRO PRO MET VAL THR VAL THR SEQRES 17 A 292 CYS ARG ASN TYR PRO VAL GLY ARG VAL THR LEU THR CYS SEQRES 18 A 292 ARG ALA PHE ASN LEU TYR THR ARG GLU ALA THR LEU VAL SEQRES 19 A 292 TRP LEU GLN ASP GLY LYS PRO VAL GLN GLN LYS THR PHE SEQRES 20 A 292 ARG SER GLU THR ILE LEU PRO SER GLY ASP GLY THR TYR SEQRES 21 A 292 GLN ALA ARG VAL SER ILE ARG VAL LEU PRO GLY GLN GLU SEQRES 22 A 292 PRO GLN PHE SER CYS ASN LEU ARG HIS GLY ASN HIS SER SEQRES 23 A 292 ILE MET GLN THR ALA VAL SEQRES 1 B 100 MET ILE GLN LYS THR PRO GLN ILE GLN VAL TYR SER ARG SEQRES 2 B 100 HIS PRO PRO GLU ASN GLY LYS PRO ASN ILE LEU ASN CYS SEQRES 3 B 100 TYR VAL THR GLN PHE HIS PRO PRO HIS ILE GLU ILE GLN SEQRES 4 B 100 MET LEU LYS ASN GLY LYS LYS ILE PRO LYS VAL GLU MET SEQRES 5 B 100 SER ASP MET SER PHE SER LYS ASP TRP SER PHE TYR ILE SEQRES 6 B 100 LEU ALA HIS THR GLU PHE THR PRO THR GLU THR ASP THR SEQRES 7 B 100 TYR ALA CYS ARG VAL LYS HIS ALA SER MET ALA GLU PRO SEQRES 8 B 100 LYS THR VAL TYR TRP ASP ARG ASP MET SEQRES 1 C 292 MET SER SER ILE GLN GLY PHE LEU ALA ASP VAL GLU VAL SEQRES 2 C 292 HIS GLY SER SER ARG LEU THR ARG THR HIS THR LEU ARG SEQRES 3 C 292 TYR ASN VAL ARG ALA HIS SER LEU GLU GLY SER GLU LYS SEQRES 4 C 292 THR GLN LEU LEU VAL LEU ILE TYR VAL ASP GLU GLU LEU SEQRES 5 C 292 PHE LEU LYS TYR ASN GLY ASP SER ARG GLU THR GLU PRO SEQRES 6 C 292 LEU GLY CYS TRP ILE LYS GLY HIS GLY GLY ASN GLU THR SEQRES 7 C 292 CYS ALA ARG GLU THR ASN ASN LEU LEU LYS VAL GLU GLU SEQRES 8 C 292 LYS LEU ARG GLY MET MET ALA GLU VAL ILE ASN GLN LYS SEQRES 9 C 292 SER GLN GLU GLU GLY LEU HIS THR LEU GLN ALA THR LEU SEQRES 10 C 292 GLY CYS GLU LEU LEU SER ASN GLY SER THR ARG GLY PHE SEQRES 11 C 292 TRP HIS LEU GLY TYR ASP GLY GLN ASN PHE LEU THR PHE SEQRES 12 C 292 ASP GLN LYS THR LEU THR TRP THR VAL ASP GLY PRO SER SEQRES 13 C 292 THR GLN GLN ASN LYS MET PHE TRP LYS THR HIS ALA PRO SEQRES 14 C 292 ARG ALA ASP LEU VAL LYS THR PHE LEU ASP ASP ILE CYS SEQRES 15 C 292 PRO ALA HIS LEU GLN ARG TYR LEU ALA SER LEU ARG ASN SEQRES 16 C 292 GLY LEU GLN ASP THR GLY PRO PRO MET VAL THR VAL THR SEQRES 17 C 292 CYS ARG ASN TYR PRO VAL GLY ARG VAL THR LEU THR CYS SEQRES 18 C 292 ARG ALA PHE ASN LEU TYR THR ARG GLU ALA THR LEU VAL SEQRES 19 C 292 TRP LEU GLN ASP GLY LYS PRO VAL GLN GLN LYS THR PHE SEQRES 20 C 292 ARG SER GLU THR ILE LEU PRO SER GLY ASP GLY THR TYR SEQRES 21 C 292 GLN ALA ARG VAL SER ILE ARG VAL LEU PRO GLY GLN GLU SEQRES 22 C 292 PRO GLN PHE SER CYS ASN LEU ARG HIS GLY ASN HIS SER SEQRES 23 C 292 ILE MET GLN THR ALA VAL SEQRES 1 D 100 MET ILE GLN LYS THR PRO GLN ILE GLN VAL TYR SER ARG SEQRES 2 D 100 HIS PRO PRO GLU ASN GLY LYS PRO ASN ILE LEU ASN CYS SEQRES 3 D 100 TYR VAL THR GLN PHE HIS PRO PRO HIS ILE GLU ILE GLN SEQRES 4 D 100 MET LEU LYS ASN GLY LYS LYS ILE PRO LYS VAL GLU MET SEQRES 5 D 100 SER ASP MET SER PHE SER LYS ASP TRP SER PHE TYR ILE SEQRES 6 D 100 LEU ALA HIS THR GLU PHE THR PRO THR GLU THR ASP THR SEQRES 7 D 100 TYR ALA CYS ARG VAL LYS HIS ALA SER MET ALA GLU PRO SEQRES 8 D 100 LYS THR VAL TYR TRP ASP ARG ASP MET HET SO4 C 301 5 HETNAM SO4 SULFATE ION FORMUL 5 SO4 O4 S 2- FORMUL 6 HOH *204(H2 O) HELIX 1 AA1 GLY A 58 MET A 81 1 24 HELIX 2 AA2 MET A 81 SER A 89 1 9 HELIX 3 AA3 THR A 141 ALA A 152 1 12 HELIX 4 AA4 ARG A 154 ASP A 164 1 11 HELIX 5 AA5 ASP A 164 ARG A 178 1 15 HELIX 6 AA6 GLN A 256 PRO A 258 5 3 HELIX 7 AA7 ALA C 64 MET C 81 1 18 HELIX 8 AA8 MET C 81 ASN C 86 1 6 HELIX 9 AA9 ASN C 144 ALA C 152 1 9 HELIX 10 AB1 ARG C 154 ASP C 164 1 11 HELIX 11 AB2 ASP C 164 LEU C 174 1 11 HELIX 12 AB3 GLN C 256 PRO C 258 5 3 SHEET 1 AA1 8 LEU A 50 CYS A 52 0 SHEET 2 AA1 8 GLU A 35 ASN A 41 -1 N LYS A 39 O GLY A 51 SHEET 3 AA1 8 LEU A 26 VAL A 32 -1 N ILE A 30 O PHE A 37 SHEET 4 AA1 8 HIS A 7 ALA A 15 -1 N ASN A 12 O LEU A 29 SHEET 5 AA1 8 LEU A 97 LEU A 105 -1 O LEU A 101 N TYR A 11 SHEET 6 AA1 8 THR A 111 TYR A 119 -1 O HIS A 116 N THR A 100 SHEET 7 AA1 8 GLN A 122 ASP A 128 -1 O PHE A 127 N TRP A 115 SHEET 8 AA1 8 THR A 133 VAL A 136 -1 O THR A 135 N THR A 126 SHEET 1 AA2 4 MET A 188 ARG A 194 0 SHEET 2 AA2 4 VAL A 201 LEU A 210 -1 O THR A 202 N ARG A 194 SHEET 3 AA2 4 TYR A 244 VAL A 252 -1 O VAL A 248 N CYS A 205 SHEET 4 AA2 4 LEU A 237 PRO A 238 -1 N LEU A 237 O GLN A 245 SHEET 1 AA3 6 LYS A 224 PHE A 231 0 SHEET 2 AA3 6 ALA A 215 GLN A 221 -1 N ALA A 215 O PHE A 231 SHEET 3 AA3 6 PHE A 260 HIS A 266 -1 O SER A 261 N LEU A 220 SHEET 4 AA3 6 HIS A 269 THR A 274 -1 O ILE A 271 N LEU A 264 SHEET 5 AA3 6 HIS D 34 LYS D 41 -1 O ILE D 35 N SER A 270 SHEET 6 AA3 6 LYS D 44 LYS D 45 -1 O LYS D 44 N LYS D 41 SHEET 1 AA4 7 LYS A 224 PHE A 231 0 SHEET 2 AA4 7 ALA A 215 GLN A 221 -1 N ALA A 215 O PHE A 231 SHEET 3 AA4 7 PHE A 260 HIS A 266 -1 O SER A 261 N LEU A 220 SHEET 4 AA4 7 HIS A 269 THR A 274 -1 O ILE A 271 N LEU A 264 SHEET 5 AA4 7 HIS D 34 LYS D 41 -1 O ILE D 35 N SER A 270 SHEET 6 AA4 7 TYR D 78 LYS D 83 -1 O ARG D 81 N GLN D 38 SHEET 7 AA4 7 LYS D 91 TYR D 94 -1 O LYS D 91 N VAL D 82 SHEET 1 AA5 4 GLN B 6 SER B 11 0 SHEET 2 AA5 4 ASN B 21 PHE B 30 -1 O TYR B 26 N GLN B 8 SHEET 3 AA5 4 PHE B 62 PHE B 70 -1 O ALA B 66 N CYS B 25 SHEET 4 AA5 4 GLU B 50 MET B 51 -1 N GLU B 50 O HIS B 67 SHEET 1 AA6 4 GLN B 6 SER B 11 0 SHEET 2 AA6 4 ASN B 21 PHE B 30 -1 O TYR B 26 N GLN B 8 SHEET 3 AA6 4 PHE B 62 PHE B 70 -1 O ALA B 66 N CYS B 25 SHEET 4 AA6 4 SER B 55 PHE B 56 -1 N SER B 55 O TYR B 63 SHEET 1 AA7 4 LYS B 44 LYS B 45 0 SHEET 2 AA7 4 GLU B 36 LYS B 41 -1 N LYS B 41 O LYS B 44 SHEET 3 AA7 4 TYR B 78 LYS B 83 -1 O ALA B 79 N LEU B 40 SHEET 4 AA7 4 LYS B 91 TYR B 94 -1 O LYS B 91 N VAL B 82 SHEET 1 AA8 8 LEU C 50 CYS C 52 0 SHEET 2 AA8 8 GLU C 35 TYR C 40 -1 N LYS C 39 O GLY C 51 SHEET 3 AA8 8 THR C 24 VAL C 32 -1 N ILE C 30 O LEU C 38 SHEET 4 AA8 8 LEU C 9 SER C 17 -1 N ARG C 10 O TYR C 31 SHEET 5 AA8 8 GLN C 98 CYS C 103 -1 O LEU C 101 N TYR C 11 SHEET 6 AA8 8 PHE C 114 GLY C 118 -1 O GLY C 118 N GLN C 98 SHEET 7 AA8 8 LEU C 125 PHE C 127 -1 O PHE C 127 N TRP C 115 SHEET 8 AA8 8 TRP C 134 THR C 135 -1 O THR C 135 N THR C 126 SHEET 1 AA9 4 MET C 188 ARG C 194 0 SHEET 2 AA9 4 VAL C 201 LEU C 210 -1 O PHE C 208 N MET C 188 SHEET 3 AA9 4 TYR C 244 VAL C 252 -1 O VAL C 248 N CYS C 205 SHEET 4 AA9 4 LEU C 237 PRO C 238 -1 N LEU C 237 O GLN C 245 SHEET 1 AB1 4 LYS C 224 PHE C 231 0 SHEET 2 AB1 4 ALA C 215 GLN C 221 -1 N ALA C 215 O PHE C 231 SHEET 3 AB1 4 PHE C 260 HIS C 266 -1 O SER C 261 N LEU C 220 SHEET 4 AB1 4 HIS C 269 THR C 274 -1 O GLN C 273 N CYS C 262 SHEET 1 AB2 4 GLN D 6 SER D 11 0 SHEET 2 AB2 4 ASN D 21 PHE D 30 -1 O ASN D 24 N TYR D 10 SHEET 3 AB2 4 PHE D 62 PHE D 70 -1 O ALA D 66 N CYS D 25 SHEET 4 AB2 4 GLU D 50 MET D 51 -1 N GLU D 50 O HIS D 67 SHEET 1 AB3 4 GLN D 6 SER D 11 0 SHEET 2 AB3 4 ASN D 21 PHE D 30 -1 O ASN D 24 N TYR D 10 SHEET 3 AB3 4 PHE D 62 PHE D 70 -1 O ALA D 66 N CYS D 25 SHEET 4 AB3 4 SER D 55 PHE D 56 -1 N SER D 55 O TYR D 63 SSBOND 1 CYS A 52 CYS A 63 1555 1555 2.04 SSBOND 2 CYS A 103 CYS A 166 1555 1555 2.06 SSBOND 3 CYS A 205 CYS A 262 1555 1555 2.03 SSBOND 4 CYS B 25 CYS B 80 1555 1555 2.03 SSBOND 5 CYS C 52 CYS C 63 1555 1555 2.03 SSBOND 6 CYS C 103 CYS C 166 1555 1555 2.03 SSBOND 7 CYS C 205 CYS C 262 1555 1555 2.04 SSBOND 8 CYS D 25 CYS D 80 1555 1555 2.04 CISPEP 1 TYR A 196 PRO A 197 0 -5.20 CISPEP 2 HIS B 31 PRO B 32 0 2.48 CISPEP 3 TYR C 196 PRO C 197 0 -4.04 CISPEP 4 HIS D 31 PRO D 32 0 5.65 SITE 1 AC1 8 ILE A 250 ARG A 251 HOH A 328 SER C 44 SITE 2 AC1 8 ARG C 45 GLU C 46 THR C 47 HOH C 416 CRYST1 89.633 93.497 138.123 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011157 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010696 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007240 0.00000