data_6AAQ # _entry.id 6AAQ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6AAQ pdb_00006aaq 10.2210/pdb6aaq/pdb WWPDB D_1300008432 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type PDB . 6AAC unspecified PDB . 6AAD unspecified PDB . 6AAN unspecified PDB . 6AAO unspecified PDB . 6AAP unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6AAQ _pdbx_database_status.recvd_initial_deposition_date 2018-07-18 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Yanagisawa, T.' 1 ? 'Kuratani, M.' 2 ? 'Yokoyama, S.' 3 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Cell Chem Biol' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2451-9456 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 26 _citation.language ? _citation.page_first 936 _citation.page_last ? _citation.title 'Structural Basis for Genetic-Code Expansion with Bulky Lysine Derivatives by an Engineered Pyrrolysyl-tRNA Synthetase.' _citation.year 2019 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1016/j.chembiol.2019.03.008 _citation.pdbx_database_id_PubMed 31031143 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Yanagisawa, T.' 1 ? primary 'Kuratani, M.' 2 ? primary 'Seki, E.' 3 ? primary 'Hino, N.' 4 ? primary 'Sakamoto, K.' 5 ? primary 'Yokoyama, S.' 6 ? # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 118.28 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 6AAQ _cell.details ? _cell.formula_units_Z ? _cell.length_a 101.981 _cell.length_a_esd ? _cell.length_b 44.244 _cell.length_b_esd ? _cell.length_c 72.660 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6AAQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Pyrrolysine--tRNA ligase' 31346.982 1 6.1.1.26 'Y306A, Y384F' ? ? 2 non-polymer syn 'MAGNESIUM ION' 24.305 3 ? ? ? ? 3 non-polymer syn "ADENOSINE-5'-TRIPHOSPHATE" 507.181 1 ? ? ? ? 4 non-polymer syn 'N6-({[(1R,8S,9s)-bicyclo[6.1.0]non-4-yn-9-yl]methoxy}carbonyl)-L-lysine' 322.399 1 ? ? ? ? 5 non-polymer syn 'POTASSIUM ION' 39.098 3 ? ? ? ? 6 water nat water 18.015 311 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Pyrrolysine--tRNA(Pyl) ligase,Pyrrolysyl-tRNA synthetase,PylRS' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSHMASAPALTKSQTDRLEVLLNPKDEISLNSGKPFRELESELLSRRKKDLQQIYAEERENYLGKLEREITRFFVDRGFL EIKSPILIPLEYIERMGIDNDTELSKQIFRVDKNFCLRPMLAPNLANYLRKLDRALPDPIKIFEIGPCYRKESDGKEHLE EFTMLNFCQMGSGCTRENLESIITDFLNHLGIDFKIVGDSCMVFGDTLDVMHGDLELSSAVVGPIPLDREWGIDKPWIGA GFGLERLLKVKHDFKNIKRAARSGSYYNGISTNL ; _entity_poly.pdbx_seq_one_letter_code_can ;GSHMASAPALTKSQTDRLEVLLNPKDEISLNSGKPFRELESELLSRRKKDLQQIYAEERENYLGKLEREITRFFVDRGFL EIKSPILIPLEYIERMGIDNDTELSKQIFRVDKNFCLRPMLAPNLANYLRKLDRALPDPIKIFEIGPCYRKESDGKEHLE EFTMLNFCQMGSGCTRENLESIITDFLNHLGIDFKIVGDSCMVFGDTLDVMHGDLELSSAVVGPIPLDREWGIDKPWIGA GFGLERLLKVKHDFKNIKRAARSGSYYNGISTNL ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 HIS n 1 4 MET n 1 5 ALA n 1 6 SER n 1 7 ALA n 1 8 PRO n 1 9 ALA n 1 10 LEU n 1 11 THR n 1 12 LYS n 1 13 SER n 1 14 GLN n 1 15 THR n 1 16 ASP n 1 17 ARG n 1 18 LEU n 1 19 GLU n 1 20 VAL n 1 21 LEU n 1 22 LEU n 1 23 ASN n 1 24 PRO n 1 25 LYS n 1 26 ASP n 1 27 GLU n 1 28 ILE n 1 29 SER n 1 30 LEU n 1 31 ASN n 1 32 SER n 1 33 GLY n 1 34 LYS n 1 35 PRO n 1 36 PHE n 1 37 ARG n 1 38 GLU n 1 39 LEU n 1 40 GLU n 1 41 SER n 1 42 GLU n 1 43 LEU n 1 44 LEU n 1 45 SER n 1 46 ARG n 1 47 ARG n 1 48 LYS n 1 49 LYS n 1 50 ASP n 1 51 LEU n 1 52 GLN n 1 53 GLN n 1 54 ILE n 1 55 TYR n 1 56 ALA n 1 57 GLU n 1 58 GLU n 1 59 ARG n 1 60 GLU n 1 61 ASN n 1 62 TYR n 1 63 LEU n 1 64 GLY n 1 65 LYS n 1 66 LEU n 1 67 GLU n 1 68 ARG n 1 69 GLU n 1 70 ILE n 1 71 THR n 1 72 ARG n 1 73 PHE n 1 74 PHE n 1 75 VAL n 1 76 ASP n 1 77 ARG n 1 78 GLY n 1 79 PHE n 1 80 LEU n 1 81 GLU n 1 82 ILE n 1 83 LYS n 1 84 SER n 1 85 PRO n 1 86 ILE n 1 87 LEU n 1 88 ILE n 1 89 PRO n 1 90 LEU n 1 91 GLU n 1 92 TYR n 1 93 ILE n 1 94 GLU n 1 95 ARG n 1 96 MET n 1 97 GLY n 1 98 ILE n 1 99 ASP n 1 100 ASN n 1 101 ASP n 1 102 THR n 1 103 GLU n 1 104 LEU n 1 105 SER n 1 106 LYS n 1 107 GLN n 1 108 ILE n 1 109 PHE n 1 110 ARG n 1 111 VAL n 1 112 ASP n 1 113 LYS n 1 114 ASN n 1 115 PHE n 1 116 CYS n 1 117 LEU n 1 118 ARG n 1 119 PRO n 1 120 MET n 1 121 LEU n 1 122 ALA n 1 123 PRO n 1 124 ASN n 1 125 LEU n 1 126 ALA n 1 127 ASN n 1 128 TYR n 1 129 LEU n 1 130 ARG n 1 131 LYS n 1 132 LEU n 1 133 ASP n 1 134 ARG n 1 135 ALA n 1 136 LEU n 1 137 PRO n 1 138 ASP n 1 139 PRO n 1 140 ILE n 1 141 LYS n 1 142 ILE n 1 143 PHE n 1 144 GLU n 1 145 ILE n 1 146 GLY n 1 147 PRO n 1 148 CYS n 1 149 TYR n 1 150 ARG n 1 151 LYS n 1 152 GLU n 1 153 SER n 1 154 ASP n 1 155 GLY n 1 156 LYS n 1 157 GLU n 1 158 HIS n 1 159 LEU n 1 160 GLU n 1 161 GLU n 1 162 PHE n 1 163 THR n 1 164 MET n 1 165 LEU n 1 166 ASN n 1 167 PHE n 1 168 CYS n 1 169 GLN n 1 170 MET n 1 171 GLY n 1 172 SER n 1 173 GLY n 1 174 CYS n 1 175 THR n 1 176 ARG n 1 177 GLU n 1 178 ASN n 1 179 LEU n 1 180 GLU n 1 181 SER n 1 182 ILE n 1 183 ILE n 1 184 THR n 1 185 ASP n 1 186 PHE n 1 187 LEU n 1 188 ASN n 1 189 HIS n 1 190 LEU n 1 191 GLY n 1 192 ILE n 1 193 ASP n 1 194 PHE n 1 195 LYS n 1 196 ILE n 1 197 VAL n 1 198 GLY n 1 199 ASP n 1 200 SER n 1 201 CYS n 1 202 MET n 1 203 VAL n 1 204 PHE n 1 205 GLY n 1 206 ASP n 1 207 THR n 1 208 LEU n 1 209 ASP n 1 210 VAL n 1 211 MET n 1 212 HIS n 1 213 GLY n 1 214 ASP n 1 215 LEU n 1 216 GLU n 1 217 LEU n 1 218 SER n 1 219 SER n 1 220 ALA n 1 221 VAL n 1 222 VAL n 1 223 GLY n 1 224 PRO n 1 225 ILE n 1 226 PRO n 1 227 LEU n 1 228 ASP n 1 229 ARG n 1 230 GLU n 1 231 TRP n 1 232 GLY n 1 233 ILE n 1 234 ASP n 1 235 LYS n 1 236 PRO n 1 237 TRP n 1 238 ILE n 1 239 GLY n 1 240 ALA n 1 241 GLY n 1 242 PHE n 1 243 GLY n 1 244 LEU n 1 245 GLU n 1 246 ARG n 1 247 LEU n 1 248 LEU n 1 249 LYS n 1 250 VAL n 1 251 LYS n 1 252 HIS n 1 253 ASP n 1 254 PHE n 1 255 LYS n 1 256 ASN n 1 257 ILE n 1 258 LYS n 1 259 ARG n 1 260 ALA n 1 261 ALA n 1 262 ARG n 1 263 SER n 1 264 GLY n 1 265 SER n 1 266 TYR n 1 267 TYR n 1 268 ASN n 1 269 GLY n 1 270 ILE n 1 271 SER n 1 272 THR n 1 273 ASN n 1 274 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 274 _entity_src_gen.gene_src_common_name 'Methanosarcina frisia' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene pylS _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Methanosarcina mazei JCM 9314' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1293038 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant rosetta _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code PYLS_METMA _struct_ref.pdbx_db_accession Q8PWY1 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;ASAPALTKSQTDRLEVLLNPKDEISLNSGKPFRELESELLSRRKKDLQQIYAEERENYLGKLEREITRFFVDRGFLEIKS PILIPLEYIERMGIDNDTELSKQIFRVDKNFCLRPMLAPNLYNYLRKLDRALPDPIKIFEIGPCYRKESDGKEHLEEFTM LNFCQMGSGCTRENLESIITDFLNHLGIDFKIVGDSCMVYGDTLDVMHGDLELSSAVVGPIPLDREWGIDKPWIGAGFGL ERLLKVKHDFKNIKRAARSESYYNGISTNL ; _struct_ref.pdbx_align_begin 185 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 6AAQ _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 5 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 274 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q8PWY1 _struct_ref_seq.db_align_beg 185 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 454 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 185 _struct_ref_seq.pdbx_auth_seq_align_end 454 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 6AAQ GLY A 1 ? UNP Q8PWY1 ? ? 'expression tag' 181 1 1 6AAQ SER A 2 ? UNP Q8PWY1 ? ? 'expression tag' 182 2 1 6AAQ HIS A 3 ? UNP Q8PWY1 ? ? 'expression tag' 183 3 1 6AAQ MET A 4 ? UNP Q8PWY1 ? ? 'expression tag' 184 4 1 6AAQ ALA A 126 ? UNP Q8PWY1 TYR 306 'engineered mutation' 306 5 1 6AAQ PHE A 204 ? UNP Q8PWY1 TYR 384 'engineered mutation' 384 6 1 6AAQ GLY A 264 ? UNP Q8PWY1 GLU 444 'see sequence details' 444 7 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 9U9 'peptide linking' . 'N6-({[(1R,8S,9s)-bicyclo[6.1.0]non-4-yn-9-yl]methoxy}carbonyl)-L-lysine' ? 'C17 H26 N2 O4' 322.399 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 ATP non-polymer . "ADENOSINE-5'-TRIPHOSPHATE" ? 'C10 H16 N5 O13 P3' 507.181 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 K non-polymer . 'POTASSIUM ION' ? 'K 1' 39.098 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6AAQ _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.28 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 46.11 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 281 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details 'Tris-HCl (pH 8.5), PEG 200, KCl, MgCl2, sodium citrate' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'RAYONIX MX225-HS' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2014-07-13 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SPRING-8 BEAMLINE BL32XU' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL32XU _diffrn_source.pdbx_synchrotron_site SPring-8 # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 6AAQ _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.55 _reflns.d_resolution_low 50 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 41555 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.8 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 8.2 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 28.6 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.13 _reflns.pdbx_Rpim_I_all 0.046 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 1.55 _reflns_shell.d_res_low 1.59 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 2072 _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all 0.159 _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6AAQ _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.551 _refine.ls_d_res_low 35.064 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 41453 _refine.ls_number_reflns_R_free 2000 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.68 _refine.ls_percent_reflns_R_free 4.82 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1765 _refine.ls_R_factor_R_free 0.1995 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1754 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.39 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method NONE _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 2zim _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 19.00 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.13 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2132 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 60 _refine_hist.number_atoms_solvent 311 _refine_hist.number_atoms_total 2503 _refine_hist.d_res_high 1.551 _refine_hist.d_res_low 35.064 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.010 ? 2333 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.232 ? 3167 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 5.103 ? 2511 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.074 ? 343 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.007 ? 409 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 1.5509 1.5897 . . 141 2785 98.00 . . . 0.2282 . 0.1886 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.5897 1.6327 . . 142 2787 100.00 . . . 0.2034 . 0.1816 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.6327 1.6808 . . 141 2792 100.00 . . . 0.2096 . 0.1744 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.6808 1.7350 . . 143 2824 100.00 . . . 0.1951 . 0.1780 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.7350 1.7970 . . 142 2791 100.00 . . . 0.2352 . 0.1841 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.7970 1.8690 . . 142 2800 100.00 . . . 0.1924 . 0.1854 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.8690 1.9540 . . 142 2810 100.00 . . . 0.2096 . 0.1818 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.9540 2.0570 . . 144 2839 100.00 . . . 0.1986 . 0.1739 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.0570 2.1859 . . 143 2807 100.00 . . . 0.1955 . 0.1719 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.1859 2.3546 . . 142 2826 100.00 . . . 0.1820 . 0.1778 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.3546 2.5915 . . 144 2846 100.00 . . . 0.2363 . 0.1844 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.5915 2.9663 . . 144 2823 100.00 . . . 0.2063 . 0.1895 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.9663 3.7366 . . 145 2864 100.00 . . . 0.1941 . 0.1674 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.7366 35.0732 . . 145 2859 97.00 . . . 0.1842 . 0.1661 . . . . . . . . . . # _struct.entry_id 6AAQ _struct.title 'Crystal structure of Methanosarcina mazei PylRS(Y306A/Y384F) complexed with BCNLys' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6AAQ _struct_keywords.text 'aminoacyl-tRNA synthetase, non-natural amino acids, TRANSLATION' _struct_keywords.pdbx_keywords TRANSLATION # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 4 ? G N N 5 ? H N N 5 ? I N N 5 ? J N N 6 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 THR A 11 ? LEU A 22 ? THR A 191 LEU A 202 1 ? 12 HELX_P HELX_P2 AA2 PRO A 35 ? GLU A 58 ? PRO A 215 GLU A 238 1 ? 24 HELX_P HELX_P3 AA3 ASN A 61 ? ARG A 77 ? ASN A 241 ARG A 257 1 ? 17 HELX_P HELX_P4 AA4 LEU A 90 ? MET A 96 ? LEU A 270 MET A 276 1 ? 7 HELX_P HELX_P5 AA5 LEU A 104 ? ILE A 108 ? LEU A 284 ILE A 288 5 ? 5 HELX_P HELX_P6 AA6 LEU A 121 ? ASP A 133 ? LEU A 301 ASP A 313 1 ? 13 HELX_P HELX_P7 AA7 THR A 175 ? GLY A 191 ? THR A 355 GLY A 371 1 ? 17 HELX_P HELX_P8 AA8 ILE A 225 ? GLY A 232 ? ILE A 405 GLY A 412 5 ? 8 HELX_P HELX_P9 AA9 LEU A 244 ? ASP A 253 ? LEU A 424 ASP A 433 1 ? 10 HELX_P HELX_P10 AB1 ASN A 256 ? ALA A 261 ? ASN A 436 ALA A 441 5 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A ASN 23 O ? ? ? 1_555 G K . K ? ? A ASN 203 A K 506 1_555 ? ? ? ? ? ? ? 2.941 ? ? metalc2 metalc ? ? A ASP 26 O ? ? ? 1_555 G K . K ? ? A ASP 206 A K 506 1_555 ? ? ? ? ? ? ? 3.283 ? ? metalc3 metalc ? ? A GLU 161 OE1 ? ? ? 1_555 H K . K ? ? A GLU 341 A K 507 1_555 ? ? ? ? ? ? ? 2.675 ? ? metalc4 metalc ? ? A GLU 216 OE2 ? ? ? 1_555 C MG . MG ? ? A GLU 396 A MG 502 1_555 ? ? ? ? ? ? ? 2.304 ? ? metalc5 metalc ? ? A GLU 216 OE1 ? ? ? 1_555 D MG . MG ? ? A GLU 396 A MG 503 1_555 ? ? ? ? ? ? ? 2.334 ? ? metalc6 metalc ? ? A SER 219 OG ? ? ? 1_555 C MG . MG ? ? A SER 399 A MG 502 1_555 ? ? ? ? ? ? ? 2.134 ? ? metalc7 metalc ? ? A ALA 261 O ? ? ? 1_555 I K . K ? ? A ALA 441 A K 508 1_555 ? ? ? ? ? ? ? 2.760 ? ? metalc8 metalc ? ? A ARG 262 O ? ? ? 1_555 H K . K ? ? A ARG 442 A K 507 1_555 ? ? ? ? ? ? ? 2.760 ? ? metalc9 metalc ? ? A TYR 266 O ? ? ? 1_555 I K . K ? ? A TYR 446 A K 508 1_555 ? ? ? ? ? ? ? 2.694 ? ? metalc10 metalc ? ? B MG . MG ? ? ? 1_555 E ATP . O2B ? ? A MG 501 A ATP 504 1_555 ? ? ? ? ? ? ? 2.050 ? ? metalc11 metalc ? ? B MG . MG ? ? ? 1_555 E ATP . O2G ? ? A MG 501 A ATP 504 1_555 ? ? ? ? ? ? ? 2.094 ? ? metalc12 metalc ? ? B MG . MG ? ? ? 1_555 J HOH . O ? ? A MG 501 A HOH 671 1_555 ? ? ? ? ? ? ? 2.097 ? ? metalc13 metalc ? ? B MG . MG ? ? ? 1_555 J HOH . O ? ? A MG 501 A HOH 702 1_555 ? ? ? ? ? ? ? 2.111 ? ? metalc14 metalc ? ? B MG . MG ? ? ? 1_555 J HOH . O ? ? A MG 501 A HOH 730 1_555 ? ? ? ? ? ? ? 2.109 ? ? metalc15 metalc ? ? B MG . MG ? ? ? 1_555 J HOH . O ? ? A MG 501 A HOH 746 1_555 ? ? ? ? ? ? ? 2.166 ? ? metalc16 metalc ? ? C MG . MG ? ? ? 1_555 E ATP . O1B ? ? A MG 502 A ATP 504 1_555 ? ? ? ? ? ? ? 2.144 ? ? metalc17 metalc ? ? C MG . MG ? ? ? 1_555 E ATP . O1A ? ? A MG 502 A ATP 504 1_555 ? ? ? ? ? ? ? 2.228 ? ? metalc18 metalc ? ? C MG . MG ? ? ? 1_555 J HOH . O ? ? A MG 502 A HOH 652 1_555 ? ? ? ? ? ? ? 2.236 ? ? metalc19 metalc ? ? C MG . MG ? ? ? 1_555 J HOH . O ? ? A MG 502 A HOH 743 1_555 ? ? ? ? ? ? ? 2.087 ? ? metalc20 metalc ? ? D MG . MG ? ? ? 1_555 E ATP . O1G ? ? A MG 503 A ATP 504 1_555 ? ? ? ? ? ? ? 2.336 ? ? metalc21 metalc ? ? D MG . MG ? ? ? 1_555 E ATP . O1B ? ? A MG 503 A ATP 504 1_555 ? ? ? ? ? ? ? 2.555 ? ? metalc22 metalc ? ? D MG . MG ? ? ? 1_555 J HOH . O ? ? A MG 503 A HOH 652 1_555 ? ? ? ? ? ? ? 2.324 ? ? metalc23 metalc ? ? D MG . MG ? ? ? 1_555 J HOH . O ? ? A MG 503 A HOH 809 1_555 ? ? ? ? ? ? ? 2.143 ? ? metalc24 metalc ? ? G K . K ? ? ? 1_555 J HOH . O ? ? A K 506 A HOH 609 1_555 ? ? ? ? ? ? ? 2.529 ? ? metalc25 metalc ? ? G K . K ? ? ? 1_555 J HOH . O ? ? A K 506 A HOH 736 1_555 ? ? ? ? ? ? ? 2.974 ? ? metalc26 metalc ? ? G K . K ? ? ? 1_555 J HOH . O ? ? A K 506 A HOH 852 1_555 ? ? ? ? ? ? ? 3.013 ? ? metalc27 metalc ? ? H K . K ? ? ? 1_555 J HOH . O ? ? A K 507 A HOH 775 1_555 ? ? ? ? ? ? ? 3.496 ? ? metalc28 metalc ? ? I K . K ? ? ? 1_555 J HOH . O ? ? A K 508 A HOH 605 1_555 ? ? ? ? ? ? ? 3.112 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 ASP 138 A . ? ASP 318 A PRO 139 A ? PRO 319 A 1 -0.05 2 GLY 223 A . ? GLY 403 A PRO 224 A ? PRO 404 A 1 -3.42 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 7 ? AA2 ? 3 ? AA3 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA1 5 6 ? anti-parallel AA1 6 7 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA3 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 LEU A 80 ? ILE A 82 ? LEU A 260 ILE A 262 AA1 2 ILE A 140 ? TYR A 149 ? ILE A 320 TYR A 329 AA1 3 GLU A 161 ? MET A 170 ? GLU A 341 MET A 350 AA1 4 TRP A 237 ? GLY A 243 ? TRP A 417 GLY A 423 AA1 5 LEU A 215 ? VAL A 222 ? LEU A 395 VAL A 402 AA1 6 GLY A 205 ? HIS A 212 ? GLY A 385 HIS A 392 AA1 7 LYS A 195 ? CYS A 201 ? LYS A 375 CYS A 381 AA2 1 LEU A 87 ? PRO A 89 ? LEU A 267 PRO A 269 AA2 2 PHE A 115 ? LEU A 117 ? PHE A 295 LEU A 297 AA2 3 ARG A 110 ? VAL A 111 ? ARG A 290 VAL A 291 AA3 1 TYR A 266 ? TYR A 267 ? TYR A 446 TYR A 447 AA3 2 ILE A 270 ? SER A 271 ? ILE A 450 SER A 451 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N ILE A 82 ? N ILE A 262 O PHE A 143 ? O PHE A 323 AA1 2 3 N ILE A 142 ? N ILE A 322 O CYS A 168 ? O CYS A 348 AA1 3 4 N LEU A 165 ? N LEU A 345 O PHE A 242 ? O PHE A 422 AA1 4 5 O GLY A 239 ? O GLY A 419 N VAL A 221 ? N VAL A 401 AA1 5 6 O LEU A 215 ? O LEU A 395 N HIS A 212 ? N HIS A 392 AA1 6 7 O MET A 211 ? O MET A 391 N LYS A 195 ? N LYS A 375 AA2 1 2 N ILE A 88 ? N ILE A 268 O CYS A 116 ? O CYS A 296 AA2 2 3 O PHE A 115 ? O PHE A 295 N VAL A 111 ? N VAL A 291 AA3 1 2 N TYR A 267 ? N TYR A 447 O ILE A 270 ? O ILE A 450 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A MG 501 ? 5 'binding site for residue MG A 501' AC2 Software A MG 502 ? 6 'binding site for residue MG A 502' AC3 Software A MG 503 ? 6 'binding site for residue MG A 503' AC4 Software A ATP 504 ? 28 'binding site for residue ATP A 504' AC5 Software A 9U9 505 ? 14 'binding site for residue 9U9 A 505' AC6 Software A K 506 ? 7 'binding site for residue K A 506' AC7 Software A K 507 ? 2 'binding site for residue K A 507' AC8 Software A K 508 ? 3 'binding site for residue K A 508' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 ATP E . ? ATP A 504 . ? 1_555 ? 2 AC1 5 HOH J . ? HOH A 671 . ? 1_555 ? 3 AC1 5 HOH J . ? HOH A 702 . ? 1_555 ? 4 AC1 5 HOH J . ? HOH A 730 . ? 1_555 ? 5 AC1 5 HOH J . ? HOH A 746 . ? 1_555 ? 6 AC2 6 GLU A 216 ? GLU A 396 . ? 1_555 ? 7 AC2 6 SER A 219 ? SER A 399 . ? 1_555 ? 8 AC2 6 MG D . ? MG A 503 . ? 1_555 ? 9 AC2 6 ATP E . ? ATP A 504 . ? 1_555 ? 10 AC2 6 HOH J . ? HOH A 652 . ? 1_555 ? 11 AC2 6 HOH J . ? HOH A 743 . ? 1_555 ? 12 AC3 6 GLU A 216 ? GLU A 396 . ? 1_555 ? 13 AC3 6 MG C . ? MG A 502 . ? 1_555 ? 14 AC3 6 ATP E . ? ATP A 504 . ? 1_555 ? 15 AC3 6 HOH J . ? HOH A 652 . ? 1_555 ? 16 AC3 6 HOH J . ? HOH A 756 . ? 4_556 ? 17 AC3 6 HOH J . ? HOH A 809 . ? 1_555 ? 18 AC4 28 ARG A 150 ? ARG A 330 . ? 1_555 ? 19 AC4 28 GLU A 152 ? GLU A 332 . ? 1_555 ? 20 AC4 28 HIS A 158 ? HIS A 338 . ? 1_555 ? 21 AC4 28 LEU A 159 ? LEU A 339 . ? 1_555 ? 22 AC4 28 PHE A 162 ? PHE A 342 . ? 1_555 ? 23 AC4 28 MET A 164 ? MET A 344 . ? 1_555 ? 24 AC4 28 GLU A 216 ? GLU A 396 . ? 1_555 ? 25 AC4 28 LEU A 217 ? LEU A 397 . ? 1_555 ? 26 AC4 28 SER A 218 ? SER A 398 . ? 1_555 ? 27 AC4 28 SER A 219 ? SER A 399 . ? 1_555 ? 28 AC4 28 GLY A 241 ? GLY A 421 . ? 1_555 ? 29 AC4 28 GLY A 243 ? GLY A 423 . ? 1_555 ? 30 AC4 28 ARG A 246 ? ARG A 426 . ? 1_555 ? 31 AC4 28 MG B . ? MG A 501 . ? 1_555 ? 32 AC4 28 MG C . ? MG A 502 . ? 1_555 ? 33 AC4 28 MG D . ? MG A 503 . ? 1_555 ? 34 AC4 28 9U9 F . ? 9U9 A 505 . ? 1_555 ? 35 AC4 28 HOH J . ? HOH A 614 . ? 1_555 ? 36 AC4 28 HOH J . ? HOH A 621 . ? 1_555 ? 37 AC4 28 HOH J . ? HOH A 652 . ? 1_555 ? 38 AC4 28 HOH J . ? HOH A 671 . ? 1_555 ? 39 AC4 28 HOH J . ? HOH A 690 . ? 1_555 ? 40 AC4 28 HOH J . ? HOH A 730 . ? 1_555 ? 41 AC4 28 HOH J . ? HOH A 743 . ? 1_555 ? 42 AC4 28 HOH J . ? HOH A 745 . ? 1_555 ? 43 AC4 28 HOH J . ? HOH A 746 . ? 1_555 ? 44 AC4 28 HOH J . ? HOH A 778 . ? 1_555 ? 45 AC4 28 HOH J . ? HOH A 784 . ? 1_555 ? 46 AC5 14 MET A 96 ? MET A 276 . ? 1_555 ? 47 AC5 14 ALA A 122 ? ALA A 302 . ? 1_555 ? 48 AC5 14 ALA A 126 ? ALA A 306 . ? 1_555 ? 49 AC5 14 ASN A 166 ? ASN A 346 . ? 1_555 ? 50 AC5 14 CYS A 168 ? CYS A 348 . ? 1_555 ? 51 AC5 14 PHE A 204 ? PHE A 384 . ? 1_555 ? 52 AC5 14 SER A 219 ? SER A 399 . ? 1_555 ? 53 AC5 14 ASP A 228 ? ASP A 408 . ? 1_555 ? 54 AC5 14 ILE A 233 ? ILE A 413 . ? 1_555 ? 55 AC5 14 TRP A 237 ? TRP A 417 . ? 1_555 ? 56 AC5 14 GLY A 239 ? GLY A 419 . ? 1_555 ? 57 AC5 14 GLY A 241 ? GLY A 421 . ? 1_555 ? 58 AC5 14 ATP E . ? ATP A 504 . ? 1_555 ? 59 AC5 14 HOH J . ? HOH A 617 . ? 1_555 ? 60 AC6 7 LEU A 22 ? LEU A 202 . ? 1_555 ? 61 AC6 7 ASN A 23 ? ASN A 203 . ? 1_555 ? 62 AC6 7 PRO A 24 ? PRO A 204 . ? 1_555 ? 63 AC6 7 ASP A 26 ? ASP A 206 . ? 1_555 ? 64 AC6 7 HOH J . ? HOH A 609 . ? 1_555 ? 65 AC6 7 HOH J . ? HOH A 736 . ? 1_555 ? 66 AC6 7 HOH J . ? HOH A 852 . ? 1_555 ? 67 AC7 2 GLU A 161 ? GLU A 341 . ? 1_555 ? 68 AC7 2 ARG A 262 ? ARG A 442 . ? 1_555 ? 69 AC8 3 ALA A 261 ? ALA A 441 . ? 1_555 ? 70 AC8 3 TYR A 266 ? TYR A 446 . ? 1_555 ? 71 AC8 3 HOH J . ? HOH A 676 . ? 2_656 ? # _atom_sites.entry_id 6AAQ _atom_sites.fract_transf_matrix[1][1] 0.009806 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.005275 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.022602 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.015628 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C K MG N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 181 ? ? ? A . n A 1 2 SER 2 182 ? ? ? A . n A 1 3 HIS 3 183 ? ? ? A . n A 1 4 MET 4 184 ? ? ? A . n A 1 5 ALA 5 185 ? ? ? A . n A 1 6 SER 6 186 ? ? ? A . n A 1 7 ALA 7 187 ? ? ? A . n A 1 8 PRO 8 188 188 PRO PRO A . n A 1 9 ALA 9 189 189 ALA ALA A . n A 1 10 LEU 10 190 190 LEU LEU A . n A 1 11 THR 11 191 191 THR THR A . n A 1 12 LYS 12 192 192 LYS LYS A . n A 1 13 SER 13 193 193 SER SER A . n A 1 14 GLN 14 194 194 GLN GLN A . n A 1 15 THR 15 195 195 THR THR A . n A 1 16 ASP 16 196 196 ASP ASP A . n A 1 17 ARG 17 197 197 ARG ARG A . n A 1 18 LEU 18 198 198 LEU LEU A . n A 1 19 GLU 19 199 199 GLU GLU A . n A 1 20 VAL 20 200 200 VAL VAL A . n A 1 21 LEU 21 201 201 LEU LEU A . n A 1 22 LEU 22 202 202 LEU LEU A . n A 1 23 ASN 23 203 203 ASN ASN A . n A 1 24 PRO 24 204 204 PRO PRO A . n A 1 25 LYS 25 205 205 LYS LYS A . n A 1 26 ASP 26 206 206 ASP ASP A . n A 1 27 GLU 27 207 207 GLU GLU A . n A 1 28 ILE 28 208 208 ILE ILE A . n A 1 29 SER 29 209 209 SER SER A . n A 1 30 LEU 30 210 210 LEU LEU A . n A 1 31 ASN 31 211 211 ASN ASN A . n A 1 32 SER 32 212 212 SER SER A . n A 1 33 GLY 33 213 213 GLY GLY A . n A 1 34 LYS 34 214 214 LYS LYS A . n A 1 35 PRO 35 215 215 PRO PRO A . n A 1 36 PHE 36 216 216 PHE PHE A . n A 1 37 ARG 37 217 217 ARG ARG A . n A 1 38 GLU 38 218 218 GLU GLU A . n A 1 39 LEU 39 219 219 LEU LEU A . n A 1 40 GLU 40 220 220 GLU GLU A . n A 1 41 SER 41 221 221 SER SER A . n A 1 42 GLU 42 222 222 GLU GLU A . n A 1 43 LEU 43 223 223 LEU LEU A . n A 1 44 LEU 44 224 224 LEU LEU A . n A 1 45 SER 45 225 225 SER SER A . n A 1 46 ARG 46 226 226 ARG ARG A . n A 1 47 ARG 47 227 227 ARG ARG A . n A 1 48 LYS 48 228 228 LYS LYS A . n A 1 49 LYS 49 229 229 LYS LYS A . n A 1 50 ASP 50 230 230 ASP ASP A . n A 1 51 LEU 51 231 231 LEU LEU A . n A 1 52 GLN 52 232 232 GLN GLN A . n A 1 53 GLN 53 233 233 GLN GLN A . n A 1 54 ILE 54 234 234 ILE ILE A . n A 1 55 TYR 55 235 235 TYR TYR A . n A 1 56 ALA 56 236 236 ALA ALA A . n A 1 57 GLU 57 237 237 GLU GLU A . n A 1 58 GLU 58 238 238 GLU GLU A . n A 1 59 ARG 59 239 239 ARG ARG A . n A 1 60 GLU 60 240 240 GLU GLU A . n A 1 61 ASN 61 241 241 ASN ASN A . n A 1 62 TYR 62 242 242 TYR TYR A . n A 1 63 LEU 63 243 243 LEU LEU A . n A 1 64 GLY 64 244 244 GLY GLY A . n A 1 65 LYS 65 245 245 LYS LYS A . n A 1 66 LEU 66 246 246 LEU LEU A . n A 1 67 GLU 67 247 247 GLU GLU A . n A 1 68 ARG 68 248 248 ARG ARG A . n A 1 69 GLU 69 249 249 GLU GLU A . n A 1 70 ILE 70 250 250 ILE ILE A . n A 1 71 THR 71 251 251 THR THR A . n A 1 72 ARG 72 252 252 ARG ARG A . n A 1 73 PHE 73 253 253 PHE PHE A . n A 1 74 PHE 74 254 254 PHE PHE A . n A 1 75 VAL 75 255 255 VAL VAL A . n A 1 76 ASP 76 256 256 ASP ASP A . n A 1 77 ARG 77 257 257 ARG ARG A . n A 1 78 GLY 78 258 258 GLY GLY A . n A 1 79 PHE 79 259 259 PHE PHE A . n A 1 80 LEU 80 260 260 LEU LEU A . n A 1 81 GLU 81 261 261 GLU GLU A . n A 1 82 ILE 82 262 262 ILE ILE A . n A 1 83 LYS 83 263 263 LYS LYS A . n A 1 84 SER 84 264 264 SER SER A . n A 1 85 PRO 85 265 265 PRO PRO A . n A 1 86 ILE 86 266 266 ILE ILE A . n A 1 87 LEU 87 267 267 LEU LEU A . n A 1 88 ILE 88 268 268 ILE ILE A . n A 1 89 PRO 89 269 269 PRO PRO A . n A 1 90 LEU 90 270 270 LEU LEU A . n A 1 91 GLU 91 271 271 GLU GLU A . n A 1 92 TYR 92 272 272 TYR TYR A . n A 1 93 ILE 93 273 273 ILE ILE A . n A 1 94 GLU 94 274 274 GLU GLU A . n A 1 95 ARG 95 275 275 ARG ARG A . n A 1 96 MET 96 276 276 MET MET A . n A 1 97 GLY 97 277 277 GLY GLY A . n A 1 98 ILE 98 278 278 ILE ILE A . n A 1 99 ASP 99 279 279 ASP ASP A . n A 1 100 ASN 100 280 280 ASN ASN A . n A 1 101 ASP 101 281 ? ? ? A . n A 1 102 THR 102 282 ? ? ? A . n A 1 103 GLU 103 283 ? ? ? A . n A 1 104 LEU 104 284 284 LEU LEU A . n A 1 105 SER 105 285 285 SER SER A . n A 1 106 LYS 106 286 286 LYS LYS A . n A 1 107 GLN 107 287 287 GLN GLN A . n A 1 108 ILE 108 288 288 ILE ILE A . n A 1 109 PHE 109 289 289 PHE PHE A . n A 1 110 ARG 110 290 290 ARG ARG A . n A 1 111 VAL 111 291 291 VAL VAL A . n A 1 112 ASP 112 292 292 ASP ASP A . n A 1 113 LYS 113 293 293 LYS LYS A . n A 1 114 ASN 114 294 294 ASN ASN A . n A 1 115 PHE 115 295 295 PHE PHE A . n A 1 116 CYS 116 296 296 CYS CYS A . n A 1 117 LEU 117 297 297 LEU LEU A . n A 1 118 ARG 118 298 298 ARG ARG A . n A 1 119 PRO 119 299 299 PRO PRO A . n A 1 120 MET 120 300 300 MET MET A . n A 1 121 LEU 121 301 301 LEU LEU A . n A 1 122 ALA 122 302 302 ALA ALA A . n A 1 123 PRO 123 303 303 PRO PRO A . n A 1 124 ASN 124 304 304 ASN ASN A . n A 1 125 LEU 125 305 305 LEU LEU A . n A 1 126 ALA 126 306 306 ALA ALA A . n A 1 127 ASN 127 307 307 ASN ASN A . n A 1 128 TYR 128 308 308 TYR TYR A . n A 1 129 LEU 129 309 309 LEU LEU A . n A 1 130 ARG 130 310 310 ARG ARG A . n A 1 131 LYS 131 311 311 LYS LYS A . n A 1 132 LEU 132 312 312 LEU LEU A . n A 1 133 ASP 133 313 313 ASP ASP A . n A 1 134 ARG 134 314 314 ARG ARG A . n A 1 135 ALA 135 315 315 ALA ALA A . n A 1 136 LEU 136 316 316 LEU LEU A . n A 1 137 PRO 137 317 317 PRO PRO A . n A 1 138 ASP 138 318 318 ASP ASP A . n A 1 139 PRO 139 319 319 PRO PRO A . n A 1 140 ILE 140 320 320 ILE ILE A . n A 1 141 LYS 141 321 321 LYS LYS A . n A 1 142 ILE 142 322 322 ILE ILE A . n A 1 143 PHE 143 323 323 PHE PHE A . n A 1 144 GLU 144 324 324 GLU GLU A . n A 1 145 ILE 145 325 325 ILE ILE A . n A 1 146 GLY 146 326 326 GLY GLY A . n A 1 147 PRO 147 327 327 PRO PRO A . n A 1 148 CYS 148 328 328 CYS CYS A . n A 1 149 TYR 149 329 329 TYR TYR A . n A 1 150 ARG 150 330 330 ARG ARG A . n A 1 151 LYS 151 331 331 LYS LYS A . n A 1 152 GLU 152 332 332 GLU GLU A . n A 1 153 SER 153 333 333 SER SER A . n A 1 154 ASP 154 334 334 ASP ASP A . n A 1 155 GLY 155 335 335 GLY GLY A . n A 1 156 LYS 156 336 336 LYS LYS A . n A 1 157 GLU 157 337 337 GLU GLU A . n A 1 158 HIS 158 338 338 HIS HIS A . n A 1 159 LEU 159 339 339 LEU LEU A . n A 1 160 GLU 160 340 340 GLU GLU A . n A 1 161 GLU 161 341 341 GLU GLU A . n A 1 162 PHE 162 342 342 PHE PHE A . n A 1 163 THR 163 343 343 THR THR A . n A 1 164 MET 164 344 344 MET MET A . n A 1 165 LEU 165 345 345 LEU LEU A . n A 1 166 ASN 166 346 346 ASN ASN A . n A 1 167 PHE 167 347 347 PHE PHE A . n A 1 168 CYS 168 348 348 CYS CYS A . n A 1 169 GLN 169 349 349 GLN GLN A . n A 1 170 MET 170 350 350 MET MET A . n A 1 171 GLY 171 351 351 GLY GLY A . n A 1 172 SER 172 352 352 SER SER A . n A 1 173 GLY 173 353 353 GLY GLY A . n A 1 174 CYS 174 354 354 CYS CYS A . n A 1 175 THR 175 355 355 THR THR A . n A 1 176 ARG 176 356 356 ARG ARG A . n A 1 177 GLU 177 357 357 GLU GLU A . n A 1 178 ASN 178 358 358 ASN ASN A . n A 1 179 LEU 179 359 359 LEU LEU A . n A 1 180 GLU 180 360 360 GLU GLU A . n A 1 181 SER 181 361 361 SER SER A . n A 1 182 ILE 182 362 362 ILE ILE A . n A 1 183 ILE 183 363 363 ILE ILE A . n A 1 184 THR 184 364 364 THR THR A . n A 1 185 ASP 185 365 365 ASP ASP A . n A 1 186 PHE 186 366 366 PHE PHE A . n A 1 187 LEU 187 367 367 LEU LEU A . n A 1 188 ASN 188 368 368 ASN ASN A . n A 1 189 HIS 189 369 369 HIS HIS A . n A 1 190 LEU 190 370 370 LEU LEU A . n A 1 191 GLY 191 371 371 GLY GLY A . n A 1 192 ILE 192 372 372 ILE ILE A . n A 1 193 ASP 193 373 373 ASP ASP A . n A 1 194 PHE 194 374 374 PHE PHE A . n A 1 195 LYS 195 375 375 LYS LYS A . n A 1 196 ILE 196 376 376 ILE ILE A . n A 1 197 VAL 197 377 377 VAL VAL A . n A 1 198 GLY 198 378 378 GLY GLY A . n A 1 199 ASP 199 379 379 ASP ASP A . n A 1 200 SER 200 380 380 SER SER A . n A 1 201 CYS 201 381 381 CYS CYS A . n A 1 202 MET 202 382 382 MET MET A . n A 1 203 VAL 203 383 383 VAL VAL A . n A 1 204 PHE 204 384 384 PHE PHE A . n A 1 205 GLY 205 385 385 GLY GLY A . n A 1 206 ASP 206 386 386 ASP ASP A . n A 1 207 THR 207 387 387 THR THR A . n A 1 208 LEU 208 388 388 LEU LEU A . n A 1 209 ASP 209 389 389 ASP ASP A . n A 1 210 VAL 210 390 390 VAL VAL A . n A 1 211 MET 211 391 391 MET MET A . n A 1 212 HIS 212 392 392 HIS HIS A . n A 1 213 GLY 213 393 393 GLY GLY A . n A 1 214 ASP 214 394 394 ASP ASP A . n A 1 215 LEU 215 395 395 LEU LEU A . n A 1 216 GLU 216 396 396 GLU GLU A . n A 1 217 LEU 217 397 397 LEU LEU A . n A 1 218 SER 218 398 398 SER SER A . n A 1 219 SER 219 399 399 SER SER A . n A 1 220 ALA 220 400 400 ALA ALA A . n A 1 221 VAL 221 401 401 VAL VAL A . n A 1 222 VAL 222 402 402 VAL VAL A . n A 1 223 GLY 223 403 403 GLY GLY A . n A 1 224 PRO 224 404 404 PRO PRO A . n A 1 225 ILE 225 405 405 ILE ILE A . n A 1 226 PRO 226 406 406 PRO PRO A . n A 1 227 LEU 227 407 407 LEU LEU A . n A 1 228 ASP 228 408 408 ASP ASP A . n A 1 229 ARG 229 409 409 ARG ARG A . n A 1 230 GLU 230 410 410 GLU GLU A . n A 1 231 TRP 231 411 411 TRP TRP A . n A 1 232 GLY 232 412 412 GLY GLY A . n A 1 233 ILE 233 413 413 ILE ILE A . n A 1 234 ASP 234 414 414 ASP ASP A . n A 1 235 LYS 235 415 415 LYS LYS A . n A 1 236 PRO 236 416 416 PRO PRO A . n A 1 237 TRP 237 417 417 TRP TRP A . n A 1 238 ILE 238 418 418 ILE ILE A . n A 1 239 GLY 239 419 419 GLY GLY A . n A 1 240 ALA 240 420 420 ALA ALA A . n A 1 241 GLY 241 421 421 GLY GLY A . n A 1 242 PHE 242 422 422 PHE PHE A . n A 1 243 GLY 243 423 423 GLY GLY A . n A 1 244 LEU 244 424 424 LEU LEU A . n A 1 245 GLU 245 425 425 GLU GLU A . n A 1 246 ARG 246 426 426 ARG ARG A . n A 1 247 LEU 247 427 427 LEU LEU A . n A 1 248 LEU 248 428 428 LEU LEU A . n A 1 249 LYS 249 429 429 LYS LYS A . n A 1 250 VAL 250 430 430 VAL VAL A . n A 1 251 LYS 251 431 431 LYS LYS A . n A 1 252 HIS 252 432 432 HIS HIS A . n A 1 253 ASP 253 433 433 ASP ASP A . n A 1 254 PHE 254 434 434 PHE PHE A . n A 1 255 LYS 255 435 435 LYS LYS A . n A 1 256 ASN 256 436 436 ASN ASN A . n A 1 257 ILE 257 437 437 ILE ILE A . n A 1 258 LYS 258 438 438 LYS LYS A . n A 1 259 ARG 259 439 439 ARG ARG A . n A 1 260 ALA 260 440 440 ALA ALA A . n A 1 261 ALA 261 441 441 ALA ALA A . n A 1 262 ARG 262 442 442 ARG ARG A . n A 1 263 SER 263 443 443 SER SER A . n A 1 264 GLY 264 444 444 GLY GLY A . n A 1 265 SER 265 445 445 SER SER A . n A 1 266 TYR 266 446 446 TYR TYR A . n A 1 267 TYR 267 447 447 TYR TYR A . n A 1 268 ASN 268 448 448 ASN ASN A . n A 1 269 GLY 269 449 449 GLY GLY A . n A 1 270 ILE 270 450 450 ILE ILE A . n A 1 271 SER 271 451 451 SER SER A . n A 1 272 THR 272 452 452 THR THR A . n A 1 273 ASN 273 453 453 ASN ASN A . n A 1 274 LEU 274 454 454 LEU LEU A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG 1 501 500 MG MG A . C 2 MG 1 502 501 MG MG A . D 2 MG 1 503 502 MG MG A . E 3 ATP 1 504 900 ATP ATP A . F 4 9U9 1 505 1 9U9 LIG A . G 5 K 1 506 1 K K A . H 5 K 1 507 2 K K A . I 5 K 1 508 3 K K A . J 6 HOH 1 601 212 HOH HOH A . J 6 HOH 2 602 298 HOH HOH A . J 6 HOH 3 603 151 HOH HOH A . J 6 HOH 4 604 105 HOH HOH A . J 6 HOH 5 605 51 HOH HOH A . J 6 HOH 6 606 56 HOH HOH A . J 6 HOH 7 607 263 HOH HOH A . J 6 HOH 8 608 136 HOH HOH A . J 6 HOH 9 609 54 HOH HOH A . J 6 HOH 10 610 307 HOH HOH A . J 6 HOH 11 611 91 HOH HOH A . J 6 HOH 12 612 102 HOH HOH A . J 6 HOH 13 613 228 HOH HOH A . J 6 HOH 14 614 294 HOH HOH A . J 6 HOH 15 615 85 HOH HOH A . J 6 HOH 16 616 112 HOH HOH A . J 6 HOH 17 617 2 HOH HOH A . J 6 HOH 18 618 117 HOH HOH A . J 6 HOH 19 619 242 HOH HOH A . J 6 HOH 20 620 116 HOH HOH A . J 6 HOH 21 621 164 HOH HOH A . J 6 HOH 22 622 121 HOH HOH A . J 6 HOH 23 623 76 HOH HOH A . J 6 HOH 24 624 21 HOH HOH A . J 6 HOH 25 625 45 HOH HOH A . J 6 HOH 26 626 250 HOH HOH A . J 6 HOH 27 627 235 HOH HOH A . J 6 HOH 28 628 88 HOH HOH A . J 6 HOH 29 629 9 HOH HOH A . J 6 HOH 30 630 33 HOH HOH A . J 6 HOH 31 631 195 HOH HOH A . J 6 HOH 32 632 253 HOH HOH A . J 6 HOH 33 633 259 HOH HOH A . J 6 HOH 34 634 281 HOH HOH A . J 6 HOH 35 635 217 HOH HOH A . J 6 HOH 36 636 3 HOH HOH A . J 6 HOH 37 637 80 HOH HOH A . J 6 HOH 38 638 52 HOH HOH A . J 6 HOH 39 639 122 HOH HOH A . J 6 HOH 40 640 5 HOH HOH A . J 6 HOH 41 641 60 HOH HOH A . J 6 HOH 42 642 219 HOH HOH A . J 6 HOH 43 643 113 HOH HOH A . J 6 HOH 44 644 12 HOH HOH A . J 6 HOH 45 645 157 HOH HOH A . J 6 HOH 46 646 127 HOH HOH A . J 6 HOH 47 647 262 HOH HOH A . J 6 HOH 48 648 75 HOH HOH A . J 6 HOH 49 649 137 HOH HOH A . J 6 HOH 50 650 158 HOH HOH A . J 6 HOH 51 651 64 HOH HOH A . J 6 HOH 52 652 29 HOH HOH A . J 6 HOH 53 653 163 HOH HOH A . J 6 HOH 54 654 109 HOH HOH A . J 6 HOH 55 655 119 HOH HOH A . J 6 HOH 56 656 269 HOH HOH A . J 6 HOH 57 657 31 HOH HOH A . J 6 HOH 58 658 248 HOH HOH A . J 6 HOH 59 659 16 HOH HOH A . J 6 HOH 60 660 28 HOH HOH A . J 6 HOH 61 661 39 HOH HOH A . J 6 HOH 62 662 161 HOH HOH A . J 6 HOH 63 663 273 HOH HOH A . J 6 HOH 64 664 84 HOH HOH A . J 6 HOH 65 665 183 HOH HOH A . J 6 HOH 66 666 146 HOH HOH A . J 6 HOH 67 667 225 HOH HOH A . J 6 HOH 68 668 300 HOH HOH A . J 6 HOH 69 669 103 HOH HOH A . J 6 HOH 70 670 251 HOH HOH A . J 6 HOH 71 671 4 HOH HOH A . J 6 HOH 72 672 138 HOH HOH A . J 6 HOH 73 673 145 HOH HOH A . J 6 HOH 74 674 24 HOH HOH A . J 6 HOH 75 675 152 HOH HOH A . J 6 HOH 76 676 38 HOH HOH A . J 6 HOH 77 677 104 HOH HOH A . J 6 HOH 78 678 95 HOH HOH A . J 6 HOH 79 679 239 HOH HOH A . J 6 HOH 80 680 258 HOH HOH A . J 6 HOH 81 681 86 HOH HOH A . J 6 HOH 82 682 139 HOH HOH A . J 6 HOH 83 683 11 HOH HOH A . J 6 HOH 84 684 240 HOH HOH A . J 6 HOH 85 685 169 HOH HOH A . J 6 HOH 86 686 178 HOH HOH A . J 6 HOH 87 687 100 HOH HOH A . J 6 HOH 88 688 32 HOH HOH A . J 6 HOH 89 689 82 HOH HOH A . J 6 HOH 90 690 66 HOH HOH A . J 6 HOH 91 691 261 HOH HOH A . J 6 HOH 92 692 42 HOH HOH A . J 6 HOH 93 693 47 HOH HOH A . J 6 HOH 94 694 13 HOH HOH A . J 6 HOH 95 695 99 HOH HOH A . J 6 HOH 96 696 295 HOH HOH A . J 6 HOH 97 697 48 HOH HOH A . J 6 HOH 98 698 79 HOH HOH A . J 6 HOH 99 699 7 HOH HOH A . J 6 HOH 100 700 8 HOH HOH A . J 6 HOH 101 701 63 HOH HOH A . J 6 HOH 102 702 15 HOH HOH A . J 6 HOH 103 703 289 HOH HOH A . J 6 HOH 104 704 120 HOH HOH A . J 6 HOH 105 705 41 HOH HOH A . J 6 HOH 106 706 270 HOH HOH A . J 6 HOH 107 707 150 HOH HOH A . J 6 HOH 108 708 77 HOH HOH A . J 6 HOH 109 709 62 HOH HOH A . J 6 HOH 110 710 108 HOH HOH A . J 6 HOH 111 711 124 HOH HOH A . J 6 HOH 112 712 25 HOH HOH A . J 6 HOH 113 713 10 HOH HOH A . J 6 HOH 114 714 14 HOH HOH A . J 6 HOH 115 715 244 HOH HOH A . J 6 HOH 116 716 232 HOH HOH A . J 6 HOH 117 717 40 HOH HOH A . J 6 HOH 118 718 34 HOH HOH A . J 6 HOH 119 719 223 HOH HOH A . J 6 HOH 120 720 268 HOH HOH A . J 6 HOH 121 721 22 HOH HOH A . J 6 HOH 122 722 174 HOH HOH A . J 6 HOH 123 723 78 HOH HOH A . J 6 HOH 124 724 90 HOH HOH A . J 6 HOH 125 725 101 HOH HOH A . J 6 HOH 126 726 230 HOH HOH A . J 6 HOH 127 727 69 HOH HOH A . J 6 HOH 128 728 140 HOH HOH A . J 6 HOH 129 729 20 HOH HOH A . J 6 HOH 130 730 26 HOH HOH A . J 6 HOH 131 731 287 HOH HOH A . J 6 HOH 132 732 46 HOH HOH A . J 6 HOH 133 733 17 HOH HOH A . J 6 HOH 134 734 92 HOH HOH A . J 6 HOH 135 735 50 HOH HOH A . J 6 HOH 136 736 30 HOH HOH A . J 6 HOH 137 737 141 HOH HOH A . J 6 HOH 138 738 255 HOH HOH A . J 6 HOH 139 739 71 HOH HOH A . J 6 HOH 140 740 43 HOH HOH A . J 6 HOH 141 741 310 HOH HOH A . J 6 HOH 142 742 106 HOH HOH A . J 6 HOH 143 743 61 HOH HOH A . J 6 HOH 144 744 143 HOH HOH A . J 6 HOH 145 745 1 HOH HOH A . J 6 HOH 146 746 37 HOH HOH A . J 6 HOH 147 747 154 HOH HOH A . J 6 HOH 148 748 197 HOH HOH A . J 6 HOH 149 749 68 HOH HOH A . J 6 HOH 150 750 284 HOH HOH A . J 6 HOH 151 751 115 HOH HOH A . J 6 HOH 152 752 170 HOH HOH A . J 6 HOH 153 753 299 HOH HOH A . J 6 HOH 154 754 203 HOH HOH A . J 6 HOH 155 755 200 HOH HOH A . J 6 HOH 156 756 208 HOH HOH A . J 6 HOH 157 757 155 HOH HOH A . J 6 HOH 158 758 276 HOH HOH A . J 6 HOH 159 759 19 HOH HOH A . J 6 HOH 160 760 23 HOH HOH A . J 6 HOH 161 761 55 HOH HOH A . J 6 HOH 162 762 27 HOH HOH A . J 6 HOH 163 763 221 HOH HOH A . J 6 HOH 164 764 111 HOH HOH A . J 6 HOH 165 765 70 HOH HOH A . J 6 HOH 166 766 44 HOH HOH A . J 6 HOH 167 767 65 HOH HOH A . J 6 HOH 168 768 184 HOH HOH A . J 6 HOH 169 769 59 HOH HOH A . J 6 HOH 170 770 308 HOH HOH A . J 6 HOH 171 771 93 HOH HOH A . J 6 HOH 172 772 89 HOH HOH A . J 6 HOH 173 773 277 HOH HOH A . J 6 HOH 174 774 107 HOH HOH A . J 6 HOH 175 775 57 HOH HOH A . J 6 HOH 176 776 74 HOH HOH A . J 6 HOH 177 777 128 HOH HOH A . J 6 HOH 178 778 229 HOH HOH A . J 6 HOH 179 779 241 HOH HOH A . J 6 HOH 180 780 147 HOH HOH A . J 6 HOH 181 781 214 HOH HOH A . J 6 HOH 182 782 192 HOH HOH A . J 6 HOH 183 783 67 HOH HOH A . J 6 HOH 184 784 149 HOH HOH A . J 6 HOH 185 785 6 HOH HOH A . J 6 HOH 186 786 131 HOH HOH A . J 6 HOH 187 787 49 HOH HOH A . J 6 HOH 188 788 205 HOH HOH A . J 6 HOH 189 789 110 HOH HOH A . J 6 HOH 190 790 160 HOH HOH A . J 6 HOH 191 791 201 HOH HOH A . J 6 HOH 192 792 173 HOH HOH A . J 6 HOH 193 793 35 HOH HOH A . J 6 HOH 194 794 280 HOH HOH A . J 6 HOH 195 795 123 HOH HOH A . J 6 HOH 196 796 18 HOH HOH A . J 6 HOH 197 797 129 HOH HOH A . J 6 HOH 198 798 133 HOH HOH A . J 6 HOH 199 799 96 HOH HOH A . J 6 HOH 200 800 247 HOH HOH A . J 6 HOH 201 801 260 HOH HOH A . J 6 HOH 202 802 238 HOH HOH A . J 6 HOH 203 803 98 HOH HOH A . J 6 HOH 204 804 94 HOH HOH A . J 6 HOH 205 805 181 HOH HOH A . J 6 HOH 206 806 58 HOH HOH A . J 6 HOH 207 807 216 HOH HOH A . J 6 HOH 208 808 311 HOH HOH A . J 6 HOH 209 809 83 HOH HOH A . J 6 HOH 210 810 172 HOH HOH A . J 6 HOH 211 811 274 HOH HOH A . J 6 HOH 212 812 254 HOH HOH A . J 6 HOH 213 813 187 HOH HOH A . J 6 HOH 214 814 234 HOH HOH A . J 6 HOH 215 815 189 HOH HOH A . J 6 HOH 216 816 182 HOH HOH A . J 6 HOH 217 817 278 HOH HOH A . J 6 HOH 218 818 222 HOH HOH A . J 6 HOH 219 819 167 HOH HOH A . J 6 HOH 220 820 166 HOH HOH A . J 6 HOH 221 821 185 HOH HOH A . J 6 HOH 222 822 264 HOH HOH A . J 6 HOH 223 823 290 HOH HOH A . J 6 HOH 224 824 165 HOH HOH A . J 6 HOH 225 825 130 HOH HOH A . J 6 HOH 226 826 246 HOH HOH A . J 6 HOH 227 827 81 HOH HOH A . J 6 HOH 228 828 233 HOH HOH A . J 6 HOH 229 829 156 HOH HOH A . J 6 HOH 230 830 142 HOH HOH A . J 6 HOH 231 831 176 HOH HOH A . J 6 HOH 232 832 177 HOH HOH A . J 6 HOH 233 833 186 HOH HOH A . J 6 HOH 234 834 227 HOH HOH A . J 6 HOH 235 835 210 HOH HOH A . J 6 HOH 236 836 144 HOH HOH A . J 6 HOH 237 837 168 HOH HOH A . J 6 HOH 238 838 224 HOH HOH A . J 6 HOH 239 839 236 HOH HOH A . J 6 HOH 240 840 285 HOH HOH A . J 6 HOH 241 841 215 HOH HOH A . J 6 HOH 242 842 193 HOH HOH A . J 6 HOH 243 843 153 HOH HOH A . J 6 HOH 244 844 190 HOH HOH A . J 6 HOH 245 845 293 HOH HOH A . J 6 HOH 246 846 114 HOH HOH A . J 6 HOH 247 847 226 HOH HOH A . J 6 HOH 248 848 198 HOH HOH A . J 6 HOH 249 849 252 HOH HOH A . J 6 HOH 250 850 291 HOH HOH A . J 6 HOH 251 851 237 HOH HOH A . J 6 HOH 252 852 73 HOH HOH A . J 6 HOH 253 853 202 HOH HOH A . J 6 HOH 254 854 175 HOH HOH A . J 6 HOH 255 855 220 HOH HOH A . J 6 HOH 256 856 297 HOH HOH A . J 6 HOH 257 857 36 HOH HOH A . J 6 HOH 258 858 266 HOH HOH A . J 6 HOH 259 859 275 HOH HOH A . J 6 HOH 260 860 148 HOH HOH A . J 6 HOH 261 861 288 HOH HOH A . J 6 HOH 262 862 312 HOH HOH A . J 6 HOH 263 863 213 HOH HOH A . J 6 HOH 264 864 292 HOH HOH A . J 6 HOH 265 865 279 HOH HOH A . J 6 HOH 266 866 125 HOH HOH A . J 6 HOH 267 867 302 HOH HOH A . J 6 HOH 268 868 196 HOH HOH A . J 6 HOH 269 869 118 HOH HOH A . J 6 HOH 270 870 53 HOH HOH A . J 6 HOH 271 871 134 HOH HOH A . J 6 HOH 272 872 179 HOH HOH A . J 6 HOH 273 873 87 HOH HOH A . J 6 HOH 274 874 296 HOH HOH A . J 6 HOH 275 875 180 HOH HOH A . J 6 HOH 276 876 162 HOH HOH A . J 6 HOH 277 877 218 HOH HOH A . J 6 HOH 278 878 211 HOH HOH A . J 6 HOH 279 879 97 HOH HOH A . J 6 HOH 280 880 271 HOH HOH A . J 6 HOH 281 881 159 HOH HOH A . J 6 HOH 282 882 72 HOH HOH A . J 6 HOH 283 883 204 HOH HOH A . J 6 HOH 284 884 283 HOH HOH A . J 6 HOH 285 885 206 HOH HOH A . J 6 HOH 286 886 194 HOH HOH A . J 6 HOH 287 887 188 HOH HOH A . J 6 HOH 288 888 209 HOH HOH A . J 6 HOH 289 889 199 HOH HOH A . J 6 HOH 290 890 265 HOH HOH A . J 6 HOH 291 891 132 HOH HOH A . J 6 HOH 292 892 257 HOH HOH A . J 6 HOH 293 893 243 HOH HOH A . J 6 HOH 294 894 304 HOH HOH A . J 6 HOH 295 895 245 HOH HOH A . J 6 HOH 296 896 309 HOH HOH A . J 6 HOH 297 897 272 HOH HOH A . J 6 HOH 298 898 282 HOH HOH A . J 6 HOH 299 899 171 HOH HOH A . J 6 HOH 300 900 256 HOH HOH A . J 6 HOH 301 901 207 HOH HOH A . J 6 HOH 302 902 191 HOH HOH A . J 6 HOH 303 903 305 HOH HOH A . J 6 HOH 304 904 303 HOH HOH A . J 6 HOH 305 905 286 HOH HOH A . J 6 HOH 306 906 306 HOH HOH A . J 6 HOH 307 907 267 HOH HOH A . J 6 HOH 308 908 249 HOH HOH A . J 6 HOH 309 909 231 HOH HOH A . J 6 HOH 310 910 301 HOH HOH A . J 6 HOH 311 911 126 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 8970 ? 1 MORE -76 ? 1 'SSA (A^2)' 22070 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_656 -x+1,y,-z+1 -1.0000000000 0.0000000000 0.0000000000 67.5560844857 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 63.9875049665 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? A ASN 23 ? A ASN 203 ? 1_555 K ? G K . ? A K 506 ? 1_555 O ? A ASP 26 ? A ASP 206 ? 1_555 84.3 ? 2 O ? A ASN 23 ? A ASN 203 ? 1_555 K ? G K . ? A K 506 ? 1_555 O ? J HOH . ? A HOH 609 ? 1_555 103.4 ? 3 O ? A ASP 26 ? A ASP 206 ? 1_555 K ? G K . ? A K 506 ? 1_555 O ? J HOH . ? A HOH 609 ? 1_555 49.8 ? 4 O ? A ASN 23 ? A ASN 203 ? 1_555 K ? G K . ? A K 506 ? 1_555 O ? J HOH . ? A HOH 736 ? 1_555 123.2 ? 5 O ? A ASP 26 ? A ASP 206 ? 1_555 K ? G K . ? A K 506 ? 1_555 O ? J HOH . ? A HOH 736 ? 1_555 64.4 ? 6 O ? J HOH . ? A HOH 609 ? 1_555 K ? G K . ? A K 506 ? 1_555 O ? J HOH . ? A HOH 736 ? 1_555 91.4 ? 7 O ? A ASN 23 ? A ASN 203 ? 1_555 K ? G K . ? A K 506 ? 1_555 O ? J HOH . ? A HOH 852 ? 1_555 83.9 ? 8 O ? A ASP 26 ? A ASP 206 ? 1_555 K ? G K . ? A K 506 ? 1_555 O ? J HOH . ? A HOH 852 ? 1_555 153.9 ? 9 O ? J HOH . ? A HOH 609 ? 1_555 K ? G K . ? A K 506 ? 1_555 O ? J HOH . ? A HOH 852 ? 1_555 111.2 ? 10 O ? J HOH . ? A HOH 736 ? 1_555 K ? G K . ? A K 506 ? 1_555 O ? J HOH . ? A HOH 852 ? 1_555 140.5 ? 11 OE1 ? A GLU 161 ? A GLU 341 ? 1_555 K ? H K . ? A K 507 ? 1_555 O ? A ARG 262 ? A ARG 442 ? 1_555 114.7 ? 12 OE1 ? A GLU 161 ? A GLU 341 ? 1_555 K ? H K . ? A K 507 ? 1_555 O ? J HOH . ? A HOH 775 ? 1_555 55.8 ? 13 O ? A ARG 262 ? A ARG 442 ? 1_555 K ? H K . ? A K 507 ? 1_555 O ? J HOH . ? A HOH 775 ? 1_555 138.1 ? 14 OE2 ? A GLU 216 ? A GLU 396 ? 1_555 MG ? C MG . ? A MG 502 ? 1_555 OG ? A SER 219 ? A SER 399 ? 1_555 92.6 ? 15 OE2 ? A GLU 216 ? A GLU 396 ? 1_555 MG ? C MG . ? A MG 502 ? 1_555 O1B ? E ATP . ? A ATP 504 ? 1_555 92.3 ? 16 OG ? A SER 219 ? A SER 399 ? 1_555 MG ? C MG . ? A MG 502 ? 1_555 O1B ? E ATP . ? A ATP 504 ? 1_555 174.8 ? 17 OE2 ? A GLU 216 ? A GLU 396 ? 1_555 MG ? C MG . ? A MG 502 ? 1_555 O1A ? E ATP . ? A ATP 504 ? 1_555 97.6 ? 18 OG ? A SER 219 ? A SER 399 ? 1_555 MG ? C MG . ? A MG 502 ? 1_555 O1A ? E ATP . ? A ATP 504 ? 1_555 94.9 ? 19 O1B ? E ATP . ? A ATP 504 ? 1_555 MG ? C MG . ? A MG 502 ? 1_555 O1A ? E ATP . ? A ATP 504 ? 1_555 86.4 ? 20 OE2 ? A GLU 216 ? A GLU 396 ? 1_555 MG ? C MG . ? A MG 502 ? 1_555 O ? J HOH . ? A HOH 652 ? 1_555 93.1 ? 21 OG ? A SER 219 ? A SER 399 ? 1_555 MG ? C MG . ? A MG 502 ? 1_555 O ? J HOH . ? A HOH 652 ? 1_555 88.5 ? 22 O1B ? E ATP . ? A ATP 504 ? 1_555 MG ? C MG . ? A MG 502 ? 1_555 O ? J HOH . ? A HOH 652 ? 1_555 89.2 ? 23 O1A ? E ATP . ? A ATP 504 ? 1_555 MG ? C MG . ? A MG 502 ? 1_555 O ? J HOH . ? A HOH 652 ? 1_555 168.6 ? 24 OE2 ? A GLU 216 ? A GLU 396 ? 1_555 MG ? C MG . ? A MG 502 ? 1_555 O ? J HOH . ? A HOH 743 ? 1_555 176.7 ? 25 OG ? A SER 219 ? A SER 399 ? 1_555 MG ? C MG . ? A MG 502 ? 1_555 O ? J HOH . ? A HOH 743 ? 1_555 87.8 ? 26 O1B ? E ATP . ? A ATP 504 ? 1_555 MG ? C MG . ? A MG 502 ? 1_555 O ? J HOH . ? A HOH 743 ? 1_555 87.3 ? 27 O1A ? E ATP . ? A ATP 504 ? 1_555 MG ? C MG . ? A MG 502 ? 1_555 O ? J HOH . ? A HOH 743 ? 1_555 85.7 ? 28 O ? J HOH . ? A HOH 652 ? 1_555 MG ? C MG . ? A MG 502 ? 1_555 O ? J HOH . ? A HOH 743 ? 1_555 83.6 ? 29 OE1 ? A GLU 216 ? A GLU 396 ? 1_555 MG ? D MG . ? A MG 503 ? 1_555 O1G ? E ATP . ? A ATP 504 ? 1_555 92.6 ? 30 OE1 ? A GLU 216 ? A GLU 396 ? 1_555 MG ? D MG . ? A MG 503 ? 1_555 O1B ? E ATP . ? A ATP 504 ? 1_555 94.1 ? 31 O1G ? E ATP . ? A ATP 504 ? 1_555 MG ? D MG . ? A MG 503 ? 1_555 O1B ? E ATP . ? A ATP 504 ? 1_555 87.6 ? 32 OE1 ? A GLU 216 ? A GLU 396 ? 1_555 MG ? D MG . ? A MG 503 ? 1_555 O ? J HOH . ? A HOH 652 ? 1_555 79.3 ? 33 O1G ? E ATP . ? A ATP 504 ? 1_555 MG ? D MG . ? A MG 503 ? 1_555 O ? J HOH . ? A HOH 652 ? 1_555 162.9 ? 34 O1B ? E ATP . ? A ATP 504 ? 1_555 MG ? D MG . ? A MG 503 ? 1_555 O ? J HOH . ? A HOH 652 ? 1_555 78.0 ? 35 OE1 ? A GLU 216 ? A GLU 396 ? 1_555 MG ? D MG . ? A MG 503 ? 1_555 O ? J HOH . ? A HOH 809 ? 1_555 90.1 ? 36 O1G ? E ATP . ? A ATP 504 ? 1_555 MG ? D MG . ? A MG 503 ? 1_555 O ? J HOH . ? A HOH 809 ? 1_555 94.7 ? 37 O1B ? E ATP . ? A ATP 504 ? 1_555 MG ? D MG . ? A MG 503 ? 1_555 O ? J HOH . ? A HOH 809 ? 1_555 175.1 ? 38 O ? J HOH . ? A HOH 652 ? 1_555 MG ? D MG . ? A MG 503 ? 1_555 O ? J HOH . ? A HOH 809 ? 1_555 100.3 ? 39 O ? A ALA 261 ? A ALA 441 ? 1_555 K ? I K . ? A K 508 ? 1_555 O ? A TYR 266 ? A TYR 446 ? 1_555 121.9 ? 40 O ? A ALA 261 ? A ALA 441 ? 1_555 K ? I K . ? A K 508 ? 1_555 O ? J HOH . ? A HOH 605 ? 1_555 84.9 ? 41 O ? A TYR 266 ? A TYR 446 ? 1_555 K ? I K . ? A K 508 ? 1_555 O ? J HOH . ? A HOH 605 ? 1_555 77.1 ? 42 O2B ? E ATP . ? A ATP 504 ? 1_555 MG ? B MG . ? A MG 501 ? 1_555 O2G ? E ATP . ? A ATP 504 ? 1_555 88.2 ? 43 O2B ? E ATP . ? A ATP 504 ? 1_555 MG ? B MG . ? A MG 501 ? 1_555 O ? J HOH . ? A HOH 671 ? 1_555 92.3 ? 44 O2G ? E ATP . ? A ATP 504 ? 1_555 MG ? B MG . ? A MG 501 ? 1_555 O ? J HOH . ? A HOH 671 ? 1_555 94.7 ? 45 O2B ? E ATP . ? A ATP 504 ? 1_555 MG ? B MG . ? A MG 501 ? 1_555 O ? J HOH . ? A HOH 702 ? 1_555 176.7 ? 46 O2G ? E ATP . ? A ATP 504 ? 1_555 MG ? B MG . ? A MG 501 ? 1_555 O ? J HOH . ? A HOH 702 ? 1_555 95.1 ? 47 O ? J HOH . ? A HOH 671 ? 1_555 MG ? B MG . ? A MG 501 ? 1_555 O ? J HOH . ? A HOH 702 ? 1_555 87.2 ? 48 O2B ? E ATP . ? A ATP 504 ? 1_555 MG ? B MG . ? A MG 501 ? 1_555 O ? J HOH . ? A HOH 730 ? 1_555 87.4 ? 49 O2G ? E ATP . ? A ATP 504 ? 1_555 MG ? B MG . ? A MG 501 ? 1_555 O ? J HOH . ? A HOH 730 ? 1_555 175.6 ? 50 O ? J HOH . ? A HOH 671 ? 1_555 MG ? B MG . ? A MG 501 ? 1_555 O ? J HOH . ? A HOH 730 ? 1_555 85.0 ? 51 O ? J HOH . ? A HOH 702 ? 1_555 MG ? B MG . ? A MG 501 ? 1_555 O ? J HOH . ? A HOH 730 ? 1_555 89.2 ? 52 O2B ? E ATP . ? A ATP 504 ? 1_555 MG ? B MG . ? A MG 501 ? 1_555 O ? J HOH . ? A HOH 746 ? 1_555 91.7 ? 53 O2G ? E ATP . ? A ATP 504 ? 1_555 MG ? B MG . ? A MG 501 ? 1_555 O ? J HOH . ? A HOH 746 ? 1_555 86.8 ? 54 O ? J HOH . ? A HOH 671 ? 1_555 MG ? B MG . ? A MG 501 ? 1_555 O ? J HOH . ? A HOH 746 ? 1_555 175.7 ? 55 O ? J HOH . ? A HOH 702 ? 1_555 MG ? B MG . ? A MG 501 ? 1_555 O ? J HOH . ? A HOH 746 ? 1_555 88.7 ? 56 O ? J HOH . ? A HOH 730 ? 1_555 MG ? B MG . ? A MG 501 ? 1_555 O ? J HOH . ? A HOH 746 ? 1_555 93.8 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2019-04-17 2 'Structure model' 1 1 2019-05-22 3 'Structure model' 1 2 2019-08-07 4 'Structure model' 1 3 2023-11-22 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' 'Derived calculations' 4 2 'Structure model' 'Source and taxonomy' 5 3 'Structure model' 'Data collection' 6 3 'Structure model' 'Database references' 7 4 'Structure model' 'Data collection' 8 4 'Structure model' 'Database references' 9 4 'Structure model' 'Derived calculations' 10 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 2 'Structure model' entity_src_gen 4 2 'Structure model' pdbx_struct_conn_angle 5 2 'Structure model' struct_conn 6 3 'Structure model' citation 7 4 'Structure model' chem_comp_atom 8 4 'Structure model' chem_comp_bond 9 4 'Structure model' database_2 10 4 'Structure model' pdbx_initial_refinement_model 11 4 'Structure model' pdbx_struct_conn_angle 12 4 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_CSD' 4 2 'Structure model' '_citation.journal_id_ISSN' 5 2 'Structure model' '_citation.pdbx_database_id_DOI' 6 2 'Structure model' '_citation.pdbx_database_id_PubMed' 7 2 'Structure model' '_citation.title' 8 2 'Structure model' '_citation.year' 9 2 'Structure model' '_entity_src_gen.pdbx_host_org_ncbi_taxonomy_id' 10 2 'Structure model' '_entity_src_gen.pdbx_host_org_scientific_name' 11 2 'Structure model' '_entity_src_gen.pdbx_host_org_variant' 12 3 'Structure model' '_citation.journal_volume' 13 3 'Structure model' '_citation.page_first' 14 4 'Structure model' '_database_2.pdbx_DOI' 15 4 'Structure model' '_database_2.pdbx_database_accession' 16 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 17 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 18 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 19 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 20 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 21 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 22 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 23 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 24 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 25 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 26 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 27 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 28 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 29 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 30 4 'Structure model' '_pdbx_struct_conn_angle.value' 31 4 'Structure model' '_struct_conn.pdbx_dist_value' 32 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 33 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 34 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 35 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 36 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 37 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? '(1.12_2829: ???)' 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XSCALE ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _pdbx_entry_details.compound_details ? _pdbx_entry_details.entry_id 6AAQ _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;The sequence reference Q8PWY1 (PYLS_METMA) is derived from a different strain (Methanosarcina mazei Go1, TaxID 192952). Residue E444G is a natural mutation observed in PylRS gene from Methanosarcina mazei JCM 9314 genome. ; _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 684 ? ? O A HOH 754 ? ? 1.98 2 1 O A HOH 684 ? ? O A HOH 793 ? ? 2.01 3 1 O A HOH 747 ? ? O A HOH 844 ? ? 2.13 4 1 O A HOH 875 ? ? O A HOH 889 ? ? 2.16 5 1 O A HOH 778 ? ? O A HOH 784 ? ? 2.17 6 1 O A HOH 603 ? ? O A HOH 629 ? ? 2.18 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 NE _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 ARG _pdbx_validate_rmsd_angle.auth_seq_id_1 298 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CZ _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 ARG _pdbx_validate_rmsd_angle.auth_seq_id_2 298 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 NH2 _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 ARG _pdbx_validate_rmsd_angle.auth_seq_id_3 298 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 116.60 _pdbx_validate_rmsd_angle.angle_target_value 120.30 _pdbx_validate_rmsd_angle.angle_deviation -3.70 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.50 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU A 238 ? ? -121.51 -69.44 2 1 ASP A 292 ? ? 33.11 66.98 3 1 LYS A 293 ? ? 82.01 -64.46 4 1 CYS A 354 ? ? -100.27 66.80 5 1 ASN A 453 ? ? -100.67 78.16 # _pdbx_distant_solvent_atoms.id 1 _pdbx_distant_solvent_atoms.PDB_model_num 1 _pdbx_distant_solvent_atoms.auth_atom_id O _pdbx_distant_solvent_atoms.label_alt_id ? _pdbx_distant_solvent_atoms.auth_asym_id A _pdbx_distant_solvent_atoms.auth_comp_id HOH _pdbx_distant_solvent_atoms.auth_seq_id 911 _pdbx_distant_solvent_atoms.PDB_ins_code ? _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance 6.02 _pdbx_distant_solvent_atoms.neighbor_ligand_distance . # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 181 ? A GLY 1 2 1 Y 1 A SER 182 ? A SER 2 3 1 Y 1 A HIS 183 ? A HIS 3 4 1 Y 1 A MET 184 ? A MET 4 5 1 Y 1 A ALA 185 ? A ALA 5 6 1 Y 1 A SER 186 ? A SER 6 7 1 Y 1 A ALA 187 ? A ALA 7 8 1 Y 1 A ASP 281 ? A ASP 101 9 1 Y 1 A THR 282 ? A THR 102 10 1 Y 1 A GLU 283 ? A GLU 103 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 9U9 C15 C N N 1 9U9 C17 C N N 2 9U9 C20 C N N 3 9U9 C21 C N N 4 9U9 C22 C N R 5 9U9 C C N N 6 9U9 CA C N S 7 9U9 CB C N N 8 9U9 CG C N N 9 9U9 CD C N N 10 9U9 CE C N N 11 9U9 C11 C N N 12 9U9 C14 C N N 13 9U9 C16 C N S 14 9U9 C18 C N N 15 9U9 C19 C N N 16 9U9 C23 C N N 17 9U9 N N N N 18 9U9 NZ N N N 19 9U9 OXT O N N 20 9U9 O O N N 21 9U9 O12 O N N 22 9U9 O13 O N N 23 9U9 H15 H N N 24 9U9 H171 H N N 25 9U9 H172 H N N 26 9U9 H211 H N N 27 9U9 H212 H N N 28 9U9 H22 H N N 29 9U9 HA H N N 30 9U9 HB2 H N N 31 9U9 HB3 H N N 32 9U9 HG2 H N N 33 9U9 HG3 H N N 34 9U9 HD2 H N N 35 9U9 HD3 H N N 36 9U9 HE2 H N N 37 9U9 HE3 H N N 38 9U9 H141 H N N 39 9U9 H142 H N N 40 9U9 H16 H N N 41 9U9 H181 H N N 42 9U9 H182 H N N 43 9U9 H231 H N N 44 9U9 H232 H N N 45 9U9 H H N N 46 9U9 H2 H N N 47 9U9 HZ H N N 48 9U9 HXT H N N 49 ALA N N N N 50 ALA CA C N S 51 ALA C C N N 52 ALA O O N N 53 ALA CB C N N 54 ALA OXT O N N 55 ALA H H N N 56 ALA H2 H N N 57 ALA HA H N N 58 ALA HB1 H N N 59 ALA HB2 H N N 60 ALA HB3 H N N 61 ALA HXT H N N 62 ARG N N N N 63 ARG CA C N S 64 ARG C C N N 65 ARG O O N N 66 ARG CB C N N 67 ARG CG C N N 68 ARG CD C N N 69 ARG NE N N N 70 ARG CZ C N N 71 ARG NH1 N N N 72 ARG NH2 N N N 73 ARG OXT O N N 74 ARG H H N N 75 ARG H2 H N N 76 ARG HA H N N 77 ARG HB2 H N N 78 ARG HB3 H N N 79 ARG HG2 H N N 80 ARG HG3 H N N 81 ARG HD2 H N N 82 ARG HD3 H N N 83 ARG HE H N N 84 ARG HH11 H N N 85 ARG HH12 H N N 86 ARG HH21 H N N 87 ARG HH22 H N N 88 ARG HXT H N N 89 ASN N N N N 90 ASN CA C N S 91 ASN C C N N 92 ASN O O N N 93 ASN CB C N N 94 ASN CG C N N 95 ASN OD1 O N N 96 ASN ND2 N N N 97 ASN OXT O N N 98 ASN H H N N 99 ASN H2 H N N 100 ASN HA H N N 101 ASN HB2 H N N 102 ASN HB3 H N N 103 ASN HD21 H N N 104 ASN HD22 H N N 105 ASN HXT H N N 106 ASP N N N N 107 ASP CA C N S 108 ASP C C N N 109 ASP O O N N 110 ASP CB C N N 111 ASP CG C N N 112 ASP OD1 O N N 113 ASP OD2 O N N 114 ASP OXT O N N 115 ASP H H N N 116 ASP H2 H N N 117 ASP HA H N N 118 ASP HB2 H N N 119 ASP HB3 H N N 120 ASP HD2 H N N 121 ASP HXT H N N 122 ATP PG P N N 123 ATP O1G O N N 124 ATP O2G O N N 125 ATP O3G O N N 126 ATP PB P N R 127 ATP O1B O N N 128 ATP O2B O N N 129 ATP O3B O N N 130 ATP PA P N R 131 ATP O1A O N N 132 ATP O2A O N N 133 ATP O3A O N N 134 ATP "O5'" O N N 135 ATP "C5'" C N N 136 ATP "C4'" C N R 137 ATP "O4'" O N N 138 ATP "C3'" C N S 139 ATP "O3'" O N N 140 ATP "C2'" C N R 141 ATP "O2'" O N N 142 ATP "C1'" C N R 143 ATP N9 N Y N 144 ATP C8 C Y N 145 ATP N7 N Y N 146 ATP C5 C Y N 147 ATP C6 C Y N 148 ATP N6 N N N 149 ATP N1 N Y N 150 ATP C2 C Y N 151 ATP N3 N Y N 152 ATP C4 C Y N 153 ATP HOG2 H N N 154 ATP HOG3 H N N 155 ATP HOB2 H N N 156 ATP HOA2 H N N 157 ATP "H5'1" H N N 158 ATP "H5'2" H N N 159 ATP "H4'" H N N 160 ATP "H3'" H N N 161 ATP "HO3'" H N N 162 ATP "H2'" H N N 163 ATP "HO2'" H N N 164 ATP "H1'" H N N 165 ATP H8 H N N 166 ATP HN61 H N N 167 ATP HN62 H N N 168 ATP H2 H N N 169 CYS N N N N 170 CYS CA C N R 171 CYS C C N N 172 CYS O O N N 173 CYS CB C N N 174 CYS SG S N N 175 CYS OXT O N N 176 CYS H H N N 177 CYS H2 H N N 178 CYS HA H N N 179 CYS HB2 H N N 180 CYS HB3 H N N 181 CYS HG H N N 182 CYS HXT H N N 183 GLN N N N N 184 GLN CA C N S 185 GLN C C N N 186 GLN O O N N 187 GLN CB C N N 188 GLN CG C N N 189 GLN CD C N N 190 GLN OE1 O N N 191 GLN NE2 N N N 192 GLN OXT O N N 193 GLN H H N N 194 GLN H2 H N N 195 GLN HA H N N 196 GLN HB2 H N N 197 GLN HB3 H N N 198 GLN HG2 H N N 199 GLN HG3 H N N 200 GLN HE21 H N N 201 GLN HE22 H N N 202 GLN HXT H N N 203 GLU N N N N 204 GLU CA C N S 205 GLU C C N N 206 GLU O O N N 207 GLU CB C N N 208 GLU CG C N N 209 GLU CD C N N 210 GLU OE1 O N N 211 GLU OE2 O N N 212 GLU OXT O N N 213 GLU H H N N 214 GLU H2 H N N 215 GLU HA H N N 216 GLU HB2 H N N 217 GLU HB3 H N N 218 GLU HG2 H N N 219 GLU HG3 H N N 220 GLU HE2 H N N 221 GLU HXT H N N 222 GLY N N N N 223 GLY CA C N N 224 GLY C C N N 225 GLY O O N N 226 GLY OXT O N N 227 GLY H H N N 228 GLY H2 H N N 229 GLY HA2 H N N 230 GLY HA3 H N N 231 GLY HXT H N N 232 HIS N N N N 233 HIS CA C N S 234 HIS C C N N 235 HIS O O N N 236 HIS CB C N N 237 HIS CG C Y N 238 HIS ND1 N Y N 239 HIS CD2 C Y N 240 HIS CE1 C Y N 241 HIS NE2 N Y N 242 HIS OXT O N N 243 HIS H H N N 244 HIS H2 H N N 245 HIS HA H N N 246 HIS HB2 H N N 247 HIS HB3 H N N 248 HIS HD1 H N N 249 HIS HD2 H N N 250 HIS HE1 H N N 251 HIS HE2 H N N 252 HIS HXT H N N 253 HOH O O N N 254 HOH H1 H N N 255 HOH H2 H N N 256 ILE N N N N 257 ILE CA C N S 258 ILE C C N N 259 ILE O O N N 260 ILE CB C N S 261 ILE CG1 C N N 262 ILE CG2 C N N 263 ILE CD1 C N N 264 ILE OXT O N N 265 ILE H H N N 266 ILE H2 H N N 267 ILE HA H N N 268 ILE HB H N N 269 ILE HG12 H N N 270 ILE HG13 H N N 271 ILE HG21 H N N 272 ILE HG22 H N N 273 ILE HG23 H N N 274 ILE HD11 H N N 275 ILE HD12 H N N 276 ILE HD13 H N N 277 ILE HXT H N N 278 K K K N N 279 LEU N N N N 280 LEU CA C N S 281 LEU C C N N 282 LEU O O N N 283 LEU CB C N N 284 LEU CG C N N 285 LEU CD1 C N N 286 LEU CD2 C N N 287 LEU OXT O N N 288 LEU H H N N 289 LEU H2 H N N 290 LEU HA H N N 291 LEU HB2 H N N 292 LEU HB3 H N N 293 LEU HG H N N 294 LEU HD11 H N N 295 LEU HD12 H N N 296 LEU HD13 H N N 297 LEU HD21 H N N 298 LEU HD22 H N N 299 LEU HD23 H N N 300 LEU HXT H N N 301 LYS N N N N 302 LYS CA C N S 303 LYS C C N N 304 LYS O O N N 305 LYS CB C N N 306 LYS CG C N N 307 LYS CD C N N 308 LYS CE C N N 309 LYS NZ N N N 310 LYS OXT O N N 311 LYS H H N N 312 LYS H2 H N N 313 LYS HA H N N 314 LYS HB2 H N N 315 LYS HB3 H N N 316 LYS HG2 H N N 317 LYS HG3 H N N 318 LYS HD2 H N N 319 LYS HD3 H N N 320 LYS HE2 H N N 321 LYS HE3 H N N 322 LYS HZ1 H N N 323 LYS HZ2 H N N 324 LYS HZ3 H N N 325 LYS HXT H N N 326 MET N N N N 327 MET CA C N S 328 MET C C N N 329 MET O O N N 330 MET CB C N N 331 MET CG C N N 332 MET SD S N N 333 MET CE C N N 334 MET OXT O N N 335 MET H H N N 336 MET H2 H N N 337 MET HA H N N 338 MET HB2 H N N 339 MET HB3 H N N 340 MET HG2 H N N 341 MET HG3 H N N 342 MET HE1 H N N 343 MET HE2 H N N 344 MET HE3 H N N 345 MET HXT H N N 346 MG MG MG N N 347 PHE N N N N 348 PHE CA C N S 349 PHE C C N N 350 PHE O O N N 351 PHE CB C N N 352 PHE CG C Y N 353 PHE CD1 C Y N 354 PHE CD2 C Y N 355 PHE CE1 C Y N 356 PHE CE2 C Y N 357 PHE CZ C Y N 358 PHE OXT O N N 359 PHE H H N N 360 PHE H2 H N N 361 PHE HA H N N 362 PHE HB2 H N N 363 PHE HB3 H N N 364 PHE HD1 H N N 365 PHE HD2 H N N 366 PHE HE1 H N N 367 PHE HE2 H N N 368 PHE HZ H N N 369 PHE HXT H N N 370 PRO N N N N 371 PRO CA C N S 372 PRO C C N N 373 PRO O O N N 374 PRO CB C N N 375 PRO CG C N N 376 PRO CD C N N 377 PRO OXT O N N 378 PRO H H N N 379 PRO HA H N N 380 PRO HB2 H N N 381 PRO HB3 H N N 382 PRO HG2 H N N 383 PRO HG3 H N N 384 PRO HD2 H N N 385 PRO HD3 H N N 386 PRO HXT H N N 387 SER N N N N 388 SER CA C N S 389 SER C C N N 390 SER O O N N 391 SER CB C N N 392 SER OG O N N 393 SER OXT O N N 394 SER H H N N 395 SER H2 H N N 396 SER HA H N N 397 SER HB2 H N N 398 SER HB3 H N N 399 SER HG H N N 400 SER HXT H N N 401 THR N N N N 402 THR CA C N S 403 THR C C N N 404 THR O O N N 405 THR CB C N R 406 THR OG1 O N N 407 THR CG2 C N N 408 THR OXT O N N 409 THR H H N N 410 THR H2 H N N 411 THR HA H N N 412 THR HB H N N 413 THR HG1 H N N 414 THR HG21 H N N 415 THR HG22 H N N 416 THR HG23 H N N 417 THR HXT H N N 418 TRP N N N N 419 TRP CA C N S 420 TRP C C N N 421 TRP O O N N 422 TRP CB C N N 423 TRP CG C Y N 424 TRP CD1 C Y N 425 TRP CD2 C Y N 426 TRP NE1 N Y N 427 TRP CE2 C Y N 428 TRP CE3 C Y N 429 TRP CZ2 C Y N 430 TRP CZ3 C Y N 431 TRP CH2 C Y N 432 TRP OXT O N N 433 TRP H H N N 434 TRP H2 H N N 435 TRP HA H N N 436 TRP HB2 H N N 437 TRP HB3 H N N 438 TRP HD1 H N N 439 TRP HE1 H N N 440 TRP HE3 H N N 441 TRP HZ2 H N N 442 TRP HZ3 H N N 443 TRP HH2 H N N 444 TRP HXT H N N 445 TYR N N N N 446 TYR CA C N S 447 TYR C C N N 448 TYR O O N N 449 TYR CB C N N 450 TYR CG C Y N 451 TYR CD1 C Y N 452 TYR CD2 C Y N 453 TYR CE1 C Y N 454 TYR CE2 C Y N 455 TYR CZ C Y N 456 TYR OH O N N 457 TYR OXT O N N 458 TYR H H N N 459 TYR H2 H N N 460 TYR HA H N N 461 TYR HB2 H N N 462 TYR HB3 H N N 463 TYR HD1 H N N 464 TYR HD2 H N N 465 TYR HE1 H N N 466 TYR HE2 H N N 467 TYR HH H N N 468 TYR HXT H N N 469 VAL N N N N 470 VAL CA C N S 471 VAL C C N N 472 VAL O O N N 473 VAL CB C N N 474 VAL CG1 C N N 475 VAL CG2 C N N 476 VAL OXT O N N 477 VAL H H N N 478 VAL H2 H N N 479 VAL HA H N N 480 VAL HB H N N 481 VAL HG11 H N N 482 VAL HG12 H N N 483 VAL HG13 H N N 484 VAL HG21 H N N 485 VAL HG22 H N N 486 VAL HG23 H N N 487 VAL HXT H N N 488 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 9U9 C23 C21 sing N N 1 9U9 C23 C20 sing N N 2 9U9 C21 C22 sing N N 3 9U9 C20 C19 trip N N 4 9U9 C22 C15 sing N N 5 9U9 C22 C16 sing N N 6 9U9 C19 C18 sing N N 7 9U9 C15 C16 sing N N 8 9U9 C15 C14 sing N N 9 9U9 C16 C17 sing N N 10 9U9 C18 C17 sing N N 11 9U9 C14 O13 sing N N 12 9U9 O13 C11 sing N N 13 9U9 CE NZ sing N N 14 9U9 CE CD sing N N 15 9U9 C11 NZ sing N N 16 9U9 C11 O12 doub N N 17 9U9 CD CG sing N N 18 9U9 CG CB sing N N 19 9U9 O C doub N N 20 9U9 CB CA sing N N 21 9U9 CA C sing N N 22 9U9 CA N sing N N 23 9U9 C OXT sing N N 24 9U9 C15 H15 sing N N 25 9U9 C17 H171 sing N N 26 9U9 C17 H172 sing N N 27 9U9 C21 H211 sing N N 28 9U9 C21 H212 sing N N 29 9U9 C22 H22 sing N N 30 9U9 CA HA sing N N 31 9U9 CB HB2 sing N N 32 9U9 CB HB3 sing N N 33 9U9 CG HG2 sing N N 34 9U9 CG HG3 sing N N 35 9U9 CD HD2 sing N N 36 9U9 CD HD3 sing N N 37 9U9 CE HE2 sing N N 38 9U9 CE HE3 sing N N 39 9U9 C14 H141 sing N N 40 9U9 C14 H142 sing N N 41 9U9 C16 H16 sing N N 42 9U9 C18 H181 sing N N 43 9U9 C18 H182 sing N N 44 9U9 C23 H231 sing N N 45 9U9 C23 H232 sing N N 46 9U9 N H sing N N 47 9U9 N H2 sing N N 48 9U9 NZ HZ sing N N 49 9U9 OXT HXT sing N N 50 ALA N CA sing N N 51 ALA N H sing N N 52 ALA N H2 sing N N 53 ALA CA C sing N N 54 ALA CA CB sing N N 55 ALA CA HA sing N N 56 ALA C O doub N N 57 ALA C OXT sing N N 58 ALA CB HB1 sing N N 59 ALA CB HB2 sing N N 60 ALA CB HB3 sing N N 61 ALA OXT HXT sing N N 62 ARG N CA sing N N 63 ARG N H sing N N 64 ARG N H2 sing N N 65 ARG CA C sing N N 66 ARG CA CB sing N N 67 ARG CA HA sing N N 68 ARG C O doub N N 69 ARG C OXT sing N N 70 ARG CB CG sing N N 71 ARG CB HB2 sing N N 72 ARG CB HB3 sing N N 73 ARG CG CD sing N N 74 ARG CG HG2 sing N N 75 ARG CG HG3 sing N N 76 ARG CD NE sing N N 77 ARG CD HD2 sing N N 78 ARG CD HD3 sing N N 79 ARG NE CZ sing N N 80 ARG NE HE sing N N 81 ARG CZ NH1 sing N N 82 ARG CZ NH2 doub N N 83 ARG NH1 HH11 sing N N 84 ARG NH1 HH12 sing N N 85 ARG NH2 HH21 sing N N 86 ARG NH2 HH22 sing N N 87 ARG OXT HXT sing N N 88 ASN N CA sing N N 89 ASN N H sing N N 90 ASN N H2 sing N N 91 ASN CA C sing N N 92 ASN CA CB sing N N 93 ASN CA HA sing N N 94 ASN C O doub N N 95 ASN C OXT sing N N 96 ASN CB CG sing N N 97 ASN CB HB2 sing N N 98 ASN CB HB3 sing N N 99 ASN CG OD1 doub N N 100 ASN CG ND2 sing N N 101 ASN ND2 HD21 sing N N 102 ASN ND2 HD22 sing N N 103 ASN OXT HXT sing N N 104 ASP N CA sing N N 105 ASP N H sing N N 106 ASP N H2 sing N N 107 ASP CA C sing N N 108 ASP CA CB sing N N 109 ASP CA HA sing N N 110 ASP C O doub N N 111 ASP C OXT sing N N 112 ASP CB CG sing N N 113 ASP CB HB2 sing N N 114 ASP CB HB3 sing N N 115 ASP CG OD1 doub N N 116 ASP CG OD2 sing N N 117 ASP OD2 HD2 sing N N 118 ASP OXT HXT sing N N 119 ATP PG O1G doub N N 120 ATP PG O2G sing N N 121 ATP PG O3G sing N N 122 ATP PG O3B sing N N 123 ATP O2G HOG2 sing N N 124 ATP O3G HOG3 sing N N 125 ATP PB O1B doub N N 126 ATP PB O2B sing N N 127 ATP PB O3B sing N N 128 ATP PB O3A sing N N 129 ATP O2B HOB2 sing N N 130 ATP PA O1A doub N N 131 ATP PA O2A sing N N 132 ATP PA O3A sing N N 133 ATP PA "O5'" sing N N 134 ATP O2A HOA2 sing N N 135 ATP "O5'" "C5'" sing N N 136 ATP "C5'" "C4'" sing N N 137 ATP "C5'" "H5'1" sing N N 138 ATP "C5'" "H5'2" sing N N 139 ATP "C4'" "O4'" sing N N 140 ATP "C4'" "C3'" sing N N 141 ATP "C4'" "H4'" sing N N 142 ATP "O4'" "C1'" sing N N 143 ATP "C3'" "O3'" sing N N 144 ATP "C3'" "C2'" sing N N 145 ATP "C3'" "H3'" sing N N 146 ATP "O3'" "HO3'" sing N N 147 ATP "C2'" "O2'" sing N N 148 ATP "C2'" "C1'" sing N N 149 ATP "C2'" "H2'" sing N N 150 ATP "O2'" "HO2'" sing N N 151 ATP "C1'" N9 sing N N 152 ATP "C1'" "H1'" sing N N 153 ATP N9 C8 sing Y N 154 ATP N9 C4 sing Y N 155 ATP C8 N7 doub Y N 156 ATP C8 H8 sing N N 157 ATP N7 C5 sing Y N 158 ATP C5 C6 sing Y N 159 ATP C5 C4 doub Y N 160 ATP C6 N6 sing N N 161 ATP C6 N1 doub Y N 162 ATP N6 HN61 sing N N 163 ATP N6 HN62 sing N N 164 ATP N1 C2 sing Y N 165 ATP C2 N3 doub Y N 166 ATP C2 H2 sing N N 167 ATP N3 C4 sing Y N 168 CYS N CA sing N N 169 CYS N H sing N N 170 CYS N H2 sing N N 171 CYS CA C sing N N 172 CYS CA CB sing N N 173 CYS CA HA sing N N 174 CYS C O doub N N 175 CYS C OXT sing N N 176 CYS CB SG sing N N 177 CYS CB HB2 sing N N 178 CYS CB HB3 sing N N 179 CYS SG HG sing N N 180 CYS OXT HXT sing N N 181 GLN N CA sing N N 182 GLN N H sing N N 183 GLN N H2 sing N N 184 GLN CA C sing N N 185 GLN CA CB sing N N 186 GLN CA HA sing N N 187 GLN C O doub N N 188 GLN C OXT sing N N 189 GLN CB CG sing N N 190 GLN CB HB2 sing N N 191 GLN CB HB3 sing N N 192 GLN CG CD sing N N 193 GLN CG HG2 sing N N 194 GLN CG HG3 sing N N 195 GLN CD OE1 doub N N 196 GLN CD NE2 sing N N 197 GLN NE2 HE21 sing N N 198 GLN NE2 HE22 sing N N 199 GLN OXT HXT sing N N 200 GLU N CA sing N N 201 GLU N H sing N N 202 GLU N H2 sing N N 203 GLU CA C sing N N 204 GLU CA CB sing N N 205 GLU CA HA sing N N 206 GLU C O doub N N 207 GLU C OXT sing N N 208 GLU CB CG sing N N 209 GLU CB HB2 sing N N 210 GLU CB HB3 sing N N 211 GLU CG CD sing N N 212 GLU CG HG2 sing N N 213 GLU CG HG3 sing N N 214 GLU CD OE1 doub N N 215 GLU CD OE2 sing N N 216 GLU OE2 HE2 sing N N 217 GLU OXT HXT sing N N 218 GLY N CA sing N N 219 GLY N H sing N N 220 GLY N H2 sing N N 221 GLY CA C sing N N 222 GLY CA HA2 sing N N 223 GLY CA HA3 sing N N 224 GLY C O doub N N 225 GLY C OXT sing N N 226 GLY OXT HXT sing N N 227 HIS N CA sing N N 228 HIS N H sing N N 229 HIS N H2 sing N N 230 HIS CA C sing N N 231 HIS CA CB sing N N 232 HIS CA HA sing N N 233 HIS C O doub N N 234 HIS C OXT sing N N 235 HIS CB CG sing N N 236 HIS CB HB2 sing N N 237 HIS CB HB3 sing N N 238 HIS CG ND1 sing Y N 239 HIS CG CD2 doub Y N 240 HIS ND1 CE1 doub Y N 241 HIS ND1 HD1 sing N N 242 HIS CD2 NE2 sing Y N 243 HIS CD2 HD2 sing N N 244 HIS CE1 NE2 sing Y N 245 HIS CE1 HE1 sing N N 246 HIS NE2 HE2 sing N N 247 HIS OXT HXT sing N N 248 HOH O H1 sing N N 249 HOH O H2 sing N N 250 ILE N CA sing N N 251 ILE N H sing N N 252 ILE N H2 sing N N 253 ILE CA C sing N N 254 ILE CA CB sing N N 255 ILE CA HA sing N N 256 ILE C O doub N N 257 ILE C OXT sing N N 258 ILE CB CG1 sing N N 259 ILE CB CG2 sing N N 260 ILE CB HB sing N N 261 ILE CG1 CD1 sing N N 262 ILE CG1 HG12 sing N N 263 ILE CG1 HG13 sing N N 264 ILE CG2 HG21 sing N N 265 ILE CG2 HG22 sing N N 266 ILE CG2 HG23 sing N N 267 ILE CD1 HD11 sing N N 268 ILE CD1 HD12 sing N N 269 ILE CD1 HD13 sing N N 270 ILE OXT HXT sing N N 271 LEU N CA sing N N 272 LEU N H sing N N 273 LEU N H2 sing N N 274 LEU CA C sing N N 275 LEU CA CB sing N N 276 LEU CA HA sing N N 277 LEU C O doub N N 278 LEU C OXT sing N N 279 LEU CB CG sing N N 280 LEU CB HB2 sing N N 281 LEU CB HB3 sing N N 282 LEU CG CD1 sing N N 283 LEU CG CD2 sing N N 284 LEU CG HG sing N N 285 LEU CD1 HD11 sing N N 286 LEU CD1 HD12 sing N N 287 LEU CD1 HD13 sing N N 288 LEU CD2 HD21 sing N N 289 LEU CD2 HD22 sing N N 290 LEU CD2 HD23 sing N N 291 LEU OXT HXT sing N N 292 LYS N CA sing N N 293 LYS N H sing N N 294 LYS N H2 sing N N 295 LYS CA C sing N N 296 LYS CA CB sing N N 297 LYS CA HA sing N N 298 LYS C O doub N N 299 LYS C OXT sing N N 300 LYS CB CG sing N N 301 LYS CB HB2 sing N N 302 LYS CB HB3 sing N N 303 LYS CG CD sing N N 304 LYS CG HG2 sing N N 305 LYS CG HG3 sing N N 306 LYS CD CE sing N N 307 LYS CD HD2 sing N N 308 LYS CD HD3 sing N N 309 LYS CE NZ sing N N 310 LYS CE HE2 sing N N 311 LYS CE HE3 sing N N 312 LYS NZ HZ1 sing N N 313 LYS NZ HZ2 sing N N 314 LYS NZ HZ3 sing N N 315 LYS OXT HXT sing N N 316 MET N CA sing N N 317 MET N H sing N N 318 MET N H2 sing N N 319 MET CA C sing N N 320 MET CA CB sing N N 321 MET CA HA sing N N 322 MET C O doub N N 323 MET C OXT sing N N 324 MET CB CG sing N N 325 MET CB HB2 sing N N 326 MET CB HB3 sing N N 327 MET CG SD sing N N 328 MET CG HG2 sing N N 329 MET CG HG3 sing N N 330 MET SD CE sing N N 331 MET CE HE1 sing N N 332 MET CE HE2 sing N N 333 MET CE HE3 sing N N 334 MET OXT HXT sing N N 335 PHE N CA sing N N 336 PHE N H sing N N 337 PHE N H2 sing N N 338 PHE CA C sing N N 339 PHE CA CB sing N N 340 PHE CA HA sing N N 341 PHE C O doub N N 342 PHE C OXT sing N N 343 PHE CB CG sing N N 344 PHE CB HB2 sing N N 345 PHE CB HB3 sing N N 346 PHE CG CD1 doub Y N 347 PHE CG CD2 sing Y N 348 PHE CD1 CE1 sing Y N 349 PHE CD1 HD1 sing N N 350 PHE CD2 CE2 doub Y N 351 PHE CD2 HD2 sing N N 352 PHE CE1 CZ doub Y N 353 PHE CE1 HE1 sing N N 354 PHE CE2 CZ sing Y N 355 PHE CE2 HE2 sing N N 356 PHE CZ HZ sing N N 357 PHE OXT HXT sing N N 358 PRO N CA sing N N 359 PRO N CD sing N N 360 PRO N H sing N N 361 PRO CA C sing N N 362 PRO CA CB sing N N 363 PRO CA HA sing N N 364 PRO C O doub N N 365 PRO C OXT sing N N 366 PRO CB CG sing N N 367 PRO CB HB2 sing N N 368 PRO CB HB3 sing N N 369 PRO CG CD sing N N 370 PRO CG HG2 sing N N 371 PRO CG HG3 sing N N 372 PRO CD HD2 sing N N 373 PRO CD HD3 sing N N 374 PRO OXT HXT sing N N 375 SER N CA sing N N 376 SER N H sing N N 377 SER N H2 sing N N 378 SER CA C sing N N 379 SER CA CB sing N N 380 SER CA HA sing N N 381 SER C O doub N N 382 SER C OXT sing N N 383 SER CB OG sing N N 384 SER CB HB2 sing N N 385 SER CB HB3 sing N N 386 SER OG HG sing N N 387 SER OXT HXT sing N N 388 THR N CA sing N N 389 THR N H sing N N 390 THR N H2 sing N N 391 THR CA C sing N N 392 THR CA CB sing N N 393 THR CA HA sing N N 394 THR C O doub N N 395 THR C OXT sing N N 396 THR CB OG1 sing N N 397 THR CB CG2 sing N N 398 THR CB HB sing N N 399 THR OG1 HG1 sing N N 400 THR CG2 HG21 sing N N 401 THR CG2 HG22 sing N N 402 THR CG2 HG23 sing N N 403 THR OXT HXT sing N N 404 TRP N CA sing N N 405 TRP N H sing N N 406 TRP N H2 sing N N 407 TRP CA C sing N N 408 TRP CA CB sing N N 409 TRP CA HA sing N N 410 TRP C O doub N N 411 TRP C OXT sing N N 412 TRP CB CG sing N N 413 TRP CB HB2 sing N N 414 TRP CB HB3 sing N N 415 TRP CG CD1 doub Y N 416 TRP CG CD2 sing Y N 417 TRP CD1 NE1 sing Y N 418 TRP CD1 HD1 sing N N 419 TRP CD2 CE2 doub Y N 420 TRP CD2 CE3 sing Y N 421 TRP NE1 CE2 sing Y N 422 TRP NE1 HE1 sing N N 423 TRP CE2 CZ2 sing Y N 424 TRP CE3 CZ3 doub Y N 425 TRP CE3 HE3 sing N N 426 TRP CZ2 CH2 doub Y N 427 TRP CZ2 HZ2 sing N N 428 TRP CZ3 CH2 sing Y N 429 TRP CZ3 HZ3 sing N N 430 TRP CH2 HH2 sing N N 431 TRP OXT HXT sing N N 432 TYR N CA sing N N 433 TYR N H sing N N 434 TYR N H2 sing N N 435 TYR CA C sing N N 436 TYR CA CB sing N N 437 TYR CA HA sing N N 438 TYR C O doub N N 439 TYR C OXT sing N N 440 TYR CB CG sing N N 441 TYR CB HB2 sing N N 442 TYR CB HB3 sing N N 443 TYR CG CD1 doub Y N 444 TYR CG CD2 sing Y N 445 TYR CD1 CE1 sing Y N 446 TYR CD1 HD1 sing N N 447 TYR CD2 CE2 doub Y N 448 TYR CD2 HD2 sing N N 449 TYR CE1 CZ doub Y N 450 TYR CE1 HE1 sing N N 451 TYR CE2 CZ sing Y N 452 TYR CE2 HE2 sing N N 453 TYR CZ OH sing N N 454 TYR OH HH sing N N 455 TYR OXT HXT sing N N 456 VAL N CA sing N N 457 VAL N H sing N N 458 VAL N H2 sing N N 459 VAL CA C sing N N 460 VAL CA CB sing N N 461 VAL CA HA sing N N 462 VAL C O doub N N 463 VAL C OXT sing N N 464 VAL CB CG1 sing N N 465 VAL CB CG2 sing N N 466 VAL CB HB sing N N 467 VAL CG1 HG11 sing N N 468 VAL CG1 HG12 sing N N 469 VAL CG1 HG13 sing N N 470 VAL CG2 HG21 sing N N 471 VAL CG2 HG22 sing N N 472 VAL CG2 HG23 sing N N 473 VAL OXT HXT sing N N 474 # _pdbx_audit_support.funding_organization 'Ministry of Education, Culture, Sports, Science and Technology (Japan)' _pdbx_audit_support.country Japan _pdbx_audit_support.grant_number 24550203 _pdbx_audit_support.ordinal 1 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'MAGNESIUM ION' MG 3 "ADENOSINE-5'-TRIPHOSPHATE" ATP 4 'N6-({[(1R,8S,9s)-bicyclo[6.1.0]non-4-yn-9-yl]methoxy}carbonyl)-L-lysine' 9U9 5 'POTASSIUM ION' K 6 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2ZIM _pdbx_initial_refinement_model.details ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? #