data_6AFQ # _entry.id 6AFQ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.398 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6AFQ pdb_00006afq 10.2210/pdb6afq/pdb WWPDB D_1300008648 ? ? BMRB 36205 ? 10.13018/BMR36205 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2019-08-14 2 'Structure model' 1 1 2023-06-14 3 'Structure model' 1 2 2024-11-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 2 'Structure model' Other 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Database references' 5 3 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' database_2 2 2 'Structure model' pdbx_database_status 3 3 'Structure model' chem_comp_atom 4 3 'Structure model' chem_comp_bond 5 3 'Structure model' database_2 6 3 'Structure model' pdbx_entry_details 7 3 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_database_2.pdbx_DOI' 2 2 'Structure model' '_database_2.pdbx_database_accession' 3 2 'Structure model' '_pdbx_database_status.status_code_nmr_data' 4 3 'Structure model' '_database_2.pdbx_DOI' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.entry_id 6AFQ _pdbx_database_status.recvd_initial_deposition_date 2018-08-08 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data REL # _pdbx_database_related.db_name BMRB _pdbx_database_related.details 'Thanatin M21F in presence of DPC' _pdbx_database_related.db_id 36205 _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Bhattacharjya, S.' 1 ? 'Sinha, S.' 2 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Thanatin M21F in presence of DPC' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Bhattacharjya, S.' 1 ? primary 'Sinha, S.' 2 ? # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description Thanatin _entity.formula_weight 2457.962 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation M21F _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code GSKKPVPIIYCNRRTGKCQRF _entity_poly.pdbx_seq_one_letter_code_can GSKKPVPIIYCNRRTGKCQRF _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 LYS n 1 4 LYS n 1 5 PRO n 1 6 VAL n 1 7 PRO n 1 8 ILE n 1 9 ILE n 1 10 TYR n 1 11 CYS n 1 12 ASN n 1 13 ARG n 1 14 ARG n 1 15 THR n 1 16 GLY n 1 17 LYS n 1 18 CYS n 1 19 GLN n 1 20 ARG n 1 21 PHE n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 21 _pdbx_entity_src_syn.organism_scientific 'Podisus maculiventris' _pdbx_entity_src_syn.organism_common_name 'Spined soldier bug' _pdbx_entity_src_syn.ncbi_taxonomy_id 29025 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 1 GLY GLY A . n A 1 2 SER 2 2 2 SER SER A . n A 1 3 LYS 3 3 3 LYS LYS A . n A 1 4 LYS 4 4 4 LYS LYS A . n A 1 5 PRO 5 5 5 PRO PRO A . n A 1 6 VAL 6 6 6 VAL VAL A . n A 1 7 PRO 7 7 7 PRO PRO A . n A 1 8 ILE 8 8 8 ILE ILE A . n A 1 9 ILE 9 9 9 ILE ILE A . n A 1 10 TYR 10 10 10 TYR TYR A . n A 1 11 CYS 11 11 11 CYS CYS A . n A 1 12 ASN 12 12 12 ASN ASN A . n A 1 13 ARG 13 13 13 ARG ARG A . n A 1 14 ARG 14 14 14 ARG ARG A . n A 1 15 THR 15 15 15 THR THR A . n A 1 16 GLY 16 16 16 GLY GLY A . n A 1 17 LYS 17 17 17 LYS LYS A . n A 1 18 CYS 18 18 18 CYS CYS A . n A 1 19 GLN 19 19 19 GLN GLN A . n A 1 20 ARG 20 20 20 ARG ARG A . n A 1 21 PHE 21 21 21 PHE PHE A . n # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6AFQ _exptl.crystals_number ? _exptl.details ? _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 6AFQ _struct.title 'Thanatin M21F in presence of DPC' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6AFQ _struct_keywords.text 'antimicrobial, thanatin, ANTIMICROBIAL PROTEIN' _struct_keywords.pdbx_keywords 'ANTIMICROBIAL PROTEIN' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code THAN_PODMA _struct_ref.pdbx_db_accession P55788 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code GSKKPVPIIYCNRRTGKCQRM _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 6AFQ _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 21 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P55788 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 21 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 21 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 6AFQ _struct_ref_seq_dif.mon_id PHE _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 21 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code P55788 _struct_ref_seq_dif.db_mon_id MET _struct_ref_seq_dif.pdbx_seq_db_seq_num 21 _struct_ref_seq_dif.details 'engineered mutation' _struct_ref_seq_dif.pdbx_auth_seq_num 21 _struct_ref_seq_dif.pdbx_ordinal 1 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 0 ? 1 MORE 0 ? 1 'SSA (A^2)' 2540 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_conn.id disulf1 _struct_conn.conn_type_id disulf _struct_conn.pdbx_leaving_atom_flag ? _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 11 _struct_conn.ptnr1_label_atom_id SG _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 18 _struct_conn.ptnr2_label_atom_id SG _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 11 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 18 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 1.928 _struct_conn.pdbx_value_order ? _struct_conn.pdbx_role ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # _pdbx_modification_feature.ordinal 1 _pdbx_modification_feature.label_comp_id CYS _pdbx_modification_feature.label_asym_id A _pdbx_modification_feature.label_seq_id 11 _pdbx_modification_feature.label_alt_id ? _pdbx_modification_feature.modified_residue_label_comp_id CYS _pdbx_modification_feature.modified_residue_label_asym_id A _pdbx_modification_feature.modified_residue_label_seq_id 18 _pdbx_modification_feature.modified_residue_label_alt_id ? _pdbx_modification_feature.auth_comp_id CYS _pdbx_modification_feature.auth_asym_id A _pdbx_modification_feature.auth_seq_id 11 _pdbx_modification_feature.PDB_ins_code ? _pdbx_modification_feature.symmetry 1_555 _pdbx_modification_feature.modified_residue_auth_comp_id CYS _pdbx_modification_feature.modified_residue_auth_asym_id A _pdbx_modification_feature.modified_residue_auth_seq_id 18 _pdbx_modification_feature.modified_residue_PDB_ins_code ? _pdbx_modification_feature.modified_residue_symmetry 1_555 _pdbx_modification_feature.comp_id_linking_atom SG _pdbx_modification_feature.modified_residue_id_linking_atom SG _pdbx_modification_feature.modified_residue_id . _pdbx_modification_feature.ref_pcm_id . _pdbx_modification_feature.ref_comp_id . _pdbx_modification_feature.type None _pdbx_modification_feature.category 'Disulfide bridge' # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 2 _struct_sheet.details ? # _struct_sheet_order.sheet_id AA1 _struct_sheet_order.range_id_1 1 _struct_sheet_order.range_id_2 2 _struct_sheet_order.offset ? _struct_sheet_order.sense anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ILE A 9 ? CYS A 11 ? ILE A 9 CYS A 11 AA1 2 CYS A 18 ? ARG A 20 ? CYS A 18 ARG A 20 # _pdbx_struct_sheet_hbond.sheet_id AA1 _pdbx_struct_sheet_hbond.range_id_1 1 _pdbx_struct_sheet_hbond.range_id_2 2 _pdbx_struct_sheet_hbond.range_1_label_atom_id N _pdbx_struct_sheet_hbond.range_1_label_comp_id TYR _pdbx_struct_sheet_hbond.range_1_label_asym_id A _pdbx_struct_sheet_hbond.range_1_label_seq_id 10 _pdbx_struct_sheet_hbond.range_1_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_1_auth_atom_id N _pdbx_struct_sheet_hbond.range_1_auth_comp_id TYR _pdbx_struct_sheet_hbond.range_1_auth_asym_id A _pdbx_struct_sheet_hbond.range_1_auth_seq_id 10 _pdbx_struct_sheet_hbond.range_2_label_atom_id O _pdbx_struct_sheet_hbond.range_2_label_comp_id GLN _pdbx_struct_sheet_hbond.range_2_label_asym_id A _pdbx_struct_sheet_hbond.range_2_label_seq_id 19 _pdbx_struct_sheet_hbond.range_2_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_2_auth_atom_id O _pdbx_struct_sheet_hbond.range_2_auth_comp_id GLN _pdbx_struct_sheet_hbond.range_2_auth_asym_id A _pdbx_struct_sheet_hbond.range_2_auth_seq_id 19 # _pdbx_entry_details.entry_id 6AFQ _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 4 ? ? -116.15 79.33 2 1 PRO A 7 ? ? -69.70 -173.60 3 2 SER A 2 ? ? -121.39 -54.54 4 2 LYS A 4 ? ? -112.15 79.32 5 2 GLN A 19 ? ? 178.98 157.87 6 3 SER A 2 ? ? -138.85 -69.46 7 3 LYS A 4 ? ? -113.14 79.41 8 3 PRO A 7 ? ? -69.79 -176.55 9 3 GLN A 19 ? ? 178.36 158.57 10 4 LYS A 4 ? ? -113.64 79.36 11 4 PRO A 7 ? ? -69.73 -173.03 12 4 GLN A 19 ? ? 178.38 158.49 13 5 SER A 2 ? ? -127.28 -72.04 14 5 GLN A 19 ? ? 175.84 159.51 15 6 SER A 2 ? ? -138.15 -66.58 16 6 LYS A 4 ? ? -114.02 79.35 17 6 PRO A 7 ? ? -69.80 -174.86 18 6 GLN A 19 ? ? 178.65 157.94 19 7 SER A 2 ? ? -131.97 -70.46 20 7 GLN A 19 ? ? 178.63 157.96 21 8 SER A 2 ? ? -138.57 -50.66 22 8 LYS A 4 ? ? -111.93 79.34 23 8 PRO A 7 ? ? -69.74 -171.64 24 8 GLN A 19 ? ? 178.76 158.04 25 9 SER A 2 ? ? -123.71 -56.25 26 9 LYS A 4 ? ? -113.47 79.34 27 9 PRO A 7 ? ? -69.77 -172.17 28 9 GLN A 19 ? ? 178.76 157.95 29 10 SER A 2 ? ? -123.27 -64.67 30 10 LYS A 4 ? ? -118.67 79.38 31 10 PRO A 7 ? ? -69.81 -171.16 32 10 GLN A 19 ? ? 178.69 157.32 33 11 SER A 2 ? ? -130.60 -68.49 34 11 LYS A 4 ? ? -111.99 79.33 35 11 PRO A 7 ? ? -69.73 -174.63 36 11 GLN A 19 ? ? 178.29 158.54 37 12 SER A 2 ? ? -105.19 -65.92 38 12 PRO A 7 ? ? -69.77 -170.96 39 13 SER A 2 ? ? -121.74 -65.00 40 13 LYS A 4 ? ? -112.30 79.39 41 13 PRO A 7 ? ? -69.79 -174.94 42 13 GLN A 19 ? ? 178.28 158.20 43 14 SER A 2 ? ? -122.65 -69.59 44 14 PRO A 7 ? ? -69.80 -178.20 45 14 GLN A 19 ? ? 178.27 158.17 46 15 SER A 2 ? ? -103.38 -71.91 47 15 LYS A 4 ? ? -112.39 79.31 48 15 GLN A 19 ? ? 176.09 157.22 49 16 PRO A 7 ? ? -69.84 -178.76 50 17 SER A 2 ? ? -129.63 -67.30 51 17 GLN A 19 ? ? 178.87 157.80 52 18 SER A 2 ? ? -134.24 -59.30 53 18 LYS A 4 ? ? -115.20 79.35 54 18 PRO A 7 ? ? -69.79 -178.34 55 18 GLN A 19 ? ? 178.88 157.83 56 19 SER A 2 ? ? -127.94 -53.61 57 19 LYS A 4 ? ? -116.35 79.42 58 19 PRO A 7 ? ? -69.76 -177.25 59 19 GLN A 19 ? ? 178.85 157.79 60 20 SER A 2 ? ? -135.22 -69.08 61 20 LYS A 4 ? ? -117.71 79.28 62 20 GLN A 19 ? ? 179.02 157.30 # _pdbx_nmr_ensemble.entry_id 6AFQ _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' # _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.entry_id 6AFQ _pdbx_nmr_representative.selection_criteria 'lowest energy' # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '0.3 mM 1H ThanatinM21F, 90% H2O/10% D2O' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' _pdbx_nmr_sample_details.label sample_1 _pdbx_nmr_sample_details.type solution _pdbx_nmr_sample_details.details ? # _pdbx_nmr_exptl_sample.solution_id 1 _pdbx_nmr_exptl_sample.component ThanatinM21F _pdbx_nmr_exptl_sample.concentration 0.3 _pdbx_nmr_exptl_sample.concentration_range ? _pdbx_nmr_exptl_sample.concentration_units mM _pdbx_nmr_exptl_sample.isotopic_labeling 1H # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 308 _pdbx_nmr_exptl_sample_conditions.pressure_units atm _pdbx_nmr_exptl_sample_conditions.pressure 1 _pdbx_nmr_exptl_sample_conditions.pH 5 _pdbx_nmr_exptl_sample_conditions.ionic_strength 125 _pdbx_nmr_exptl_sample_conditions.details ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_err ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_units mM _pdbx_nmr_exptl_sample_conditions.label conditions_1 _pdbx_nmr_exptl_sample_conditions.pH_err ? _pdbx_nmr_exptl_sample_conditions.pH_units pH _pdbx_nmr_exptl_sample_conditions.pressure_err ? _pdbx_nmr_exptl_sample_conditions.temperature_err ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.spectrometer_id _pdbx_nmr_exptl.sample_state 1 1 1 '2D NOESY' 1 isotropic 2 1 1 '2D TOCSY' 1 isotropic # _pdbx_nmr_refine.entry_id 6AFQ _pdbx_nmr_refine.method na _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 3 # loop_ _pdbx_nmr_software.ordinal _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors 1 collection TopSpin ? 'Bruker Biospin' 2 'chemical shift assignment' Sparky ? Goddard 3 'structure calculation' CYANA ? 'Guntert, Mumenthaler and Wuthrich' # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ARG N N N N 1 ARG CA C N S 2 ARG C C N N 3 ARG O O N N 4 ARG CB C N N 5 ARG CG C N N 6 ARG CD C N N 7 ARG NE N N N 8 ARG CZ C N N 9 ARG NH1 N N N 10 ARG NH2 N N N 11 ARG OXT O N N 12 ARG H H N N 13 ARG H2 H N N 14 ARG HA H N N 15 ARG HB2 H N N 16 ARG HB3 H N N 17 ARG HG2 H N N 18 ARG HG3 H N N 19 ARG HD2 H N N 20 ARG HD3 H N N 21 ARG HE H N N 22 ARG HH11 H N N 23 ARG HH12 H N N 24 ARG HH21 H N N 25 ARG HH22 H N N 26 ARG HXT H N N 27 ASN N N N N 28 ASN CA C N S 29 ASN C C N N 30 ASN O O N N 31 ASN CB C N N 32 ASN CG C N N 33 ASN OD1 O N N 34 ASN ND2 N N N 35 ASN OXT O N N 36 ASN H H N N 37 ASN H2 H N N 38 ASN HA H N N 39 ASN HB2 H N N 40 ASN HB3 H N N 41 ASN HD21 H N N 42 ASN HD22 H N N 43 ASN HXT H N N 44 CYS N N N N 45 CYS CA C N R 46 CYS C C N N 47 CYS O O N N 48 CYS CB C N N 49 CYS SG S N N 50 CYS OXT O N N 51 CYS H H N N 52 CYS H2 H N N 53 CYS HA H N N 54 CYS HB2 H N N 55 CYS HB3 H N N 56 CYS HG H N N 57 CYS HXT H N N 58 GLN N N N N 59 GLN CA C N S 60 GLN C C N N 61 GLN O O N N 62 GLN CB C N N 63 GLN CG C N N 64 GLN CD C N N 65 GLN OE1 O N N 66 GLN NE2 N N N 67 GLN OXT O N N 68 GLN H H N N 69 GLN H2 H N N 70 GLN HA H N N 71 GLN HB2 H N N 72 GLN HB3 H N N 73 GLN HG2 H N N 74 GLN HG3 H N N 75 GLN HE21 H N N 76 GLN HE22 H N N 77 GLN HXT H N N 78 GLY N N N N 79 GLY CA C N N 80 GLY C C N N 81 GLY O O N N 82 GLY OXT O N N 83 GLY H H N N 84 GLY H2 H N N 85 GLY HA2 H N N 86 GLY HA3 H N N 87 GLY HXT H N N 88 ILE N N N N 89 ILE CA C N S 90 ILE C C N N 91 ILE O O N N 92 ILE CB C N S 93 ILE CG1 C N N 94 ILE CG2 C N N 95 ILE CD1 C N N 96 ILE OXT O N N 97 ILE H H N N 98 ILE H2 H N N 99 ILE HA H N N 100 ILE HB H N N 101 ILE HG12 H N N 102 ILE HG13 H N N 103 ILE HG21 H N N 104 ILE HG22 H N N 105 ILE HG23 H N N 106 ILE HD11 H N N 107 ILE HD12 H N N 108 ILE HD13 H N N 109 ILE HXT H N N 110 LYS N N N N 111 LYS CA C N S 112 LYS C C N N 113 LYS O O N N 114 LYS CB C N N 115 LYS CG C N N 116 LYS CD C N N 117 LYS CE C N N 118 LYS NZ N N N 119 LYS OXT O N N 120 LYS H H N N 121 LYS H2 H N N 122 LYS HA H N N 123 LYS HB2 H N N 124 LYS HB3 H N N 125 LYS HG2 H N N 126 LYS HG3 H N N 127 LYS HD2 H N N 128 LYS HD3 H N N 129 LYS HE2 H N N 130 LYS HE3 H N N 131 LYS HZ1 H N N 132 LYS HZ2 H N N 133 LYS HZ3 H N N 134 LYS HXT H N N 135 MET N N N N 136 MET CA C N S 137 MET C C N N 138 MET O O N N 139 MET CB C N N 140 MET CG C N N 141 MET SD S N N 142 MET CE C N N 143 MET OXT O N N 144 MET H H N N 145 MET H2 H N N 146 MET HA H N N 147 MET HB2 H N N 148 MET HB3 H N N 149 MET HG2 H N N 150 MET HG3 H N N 151 MET HE1 H N N 152 MET HE2 H N N 153 MET HE3 H N N 154 MET HXT H N N 155 PHE N N N N 156 PHE CA C N S 157 PHE C C N N 158 PHE O O N N 159 PHE CB C N N 160 PHE CG C Y N 161 PHE CD1 C Y N 162 PHE CD2 C Y N 163 PHE CE1 C Y N 164 PHE CE2 C Y N 165 PHE CZ C Y N 166 PHE OXT O N N 167 PHE H H N N 168 PHE H2 H N N 169 PHE HA H N N 170 PHE HB2 H N N 171 PHE HB3 H N N 172 PHE HD1 H N N 173 PHE HD2 H N N 174 PHE HE1 H N N 175 PHE HE2 H N N 176 PHE HZ H N N 177 PHE HXT H N N 178 PRO N N N N 179 PRO CA C N S 180 PRO C C N N 181 PRO O O N N 182 PRO CB C N N 183 PRO CG C N N 184 PRO CD C N N 185 PRO OXT O N N 186 PRO H H N N 187 PRO HA H N N 188 PRO HB2 H N N 189 PRO HB3 H N N 190 PRO HG2 H N N 191 PRO HG3 H N N 192 PRO HD2 H N N 193 PRO HD3 H N N 194 PRO HXT H N N 195 SER N N N N 196 SER CA C N S 197 SER C C N N 198 SER O O N N 199 SER CB C N N 200 SER OG O N N 201 SER OXT O N N 202 SER H H N N 203 SER H2 H N N 204 SER HA H N N 205 SER HB2 H N N 206 SER HB3 H N N 207 SER HG H N N 208 SER HXT H N N 209 THR N N N N 210 THR CA C N S 211 THR C C N N 212 THR O O N N 213 THR CB C N R 214 THR OG1 O N N 215 THR CG2 C N N 216 THR OXT O N N 217 THR H H N N 218 THR H2 H N N 219 THR HA H N N 220 THR HB H N N 221 THR HG1 H N N 222 THR HG21 H N N 223 THR HG22 H N N 224 THR HG23 H N N 225 THR HXT H N N 226 TYR N N N N 227 TYR CA C N S 228 TYR C C N N 229 TYR O O N N 230 TYR CB C N N 231 TYR CG C Y N 232 TYR CD1 C Y N 233 TYR CD2 C Y N 234 TYR CE1 C Y N 235 TYR CE2 C Y N 236 TYR CZ C Y N 237 TYR OH O N N 238 TYR OXT O N N 239 TYR H H N N 240 TYR H2 H N N 241 TYR HA H N N 242 TYR HB2 H N N 243 TYR HB3 H N N 244 TYR HD1 H N N 245 TYR HD2 H N N 246 TYR HE1 H N N 247 TYR HE2 H N N 248 TYR HH H N N 249 TYR HXT H N N 250 VAL N N N N 251 VAL CA C N S 252 VAL C C N N 253 VAL O O N N 254 VAL CB C N N 255 VAL CG1 C N N 256 VAL CG2 C N N 257 VAL OXT O N N 258 VAL H H N N 259 VAL H2 H N N 260 VAL HA H N N 261 VAL HB H N N 262 VAL HG11 H N N 263 VAL HG12 H N N 264 VAL HG13 H N N 265 VAL HG21 H N N 266 VAL HG22 H N N 267 VAL HG23 H N N 268 VAL HXT H N N 269 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ARG N CA sing N N 1 ARG N H sing N N 2 ARG N H2 sing N N 3 ARG CA C sing N N 4 ARG CA CB sing N N 5 ARG CA HA sing N N 6 ARG C O doub N N 7 ARG C OXT sing N N 8 ARG CB CG sing N N 9 ARG CB HB2 sing N N 10 ARG CB HB3 sing N N 11 ARG CG CD sing N N 12 ARG CG HG2 sing N N 13 ARG CG HG3 sing N N 14 ARG CD NE sing N N 15 ARG CD HD2 sing N N 16 ARG CD HD3 sing N N 17 ARG NE CZ sing N N 18 ARG NE HE sing N N 19 ARG CZ NH1 sing N N 20 ARG CZ NH2 doub N N 21 ARG NH1 HH11 sing N N 22 ARG NH1 HH12 sing N N 23 ARG NH2 HH21 sing N N 24 ARG NH2 HH22 sing N N 25 ARG OXT HXT sing N N 26 ASN N CA sing N N 27 ASN N H sing N N 28 ASN N H2 sing N N 29 ASN CA C sing N N 30 ASN CA CB sing N N 31 ASN CA HA sing N N 32 ASN C O doub N N 33 ASN C OXT sing N N 34 ASN CB CG sing N N 35 ASN CB HB2 sing N N 36 ASN CB HB3 sing N N 37 ASN CG OD1 doub N N 38 ASN CG ND2 sing N N 39 ASN ND2 HD21 sing N N 40 ASN ND2 HD22 sing N N 41 ASN OXT HXT sing N N 42 CYS N CA sing N N 43 CYS N H sing N N 44 CYS N H2 sing N N 45 CYS CA C sing N N 46 CYS CA CB sing N N 47 CYS CA HA sing N N 48 CYS C O doub N N 49 CYS C OXT sing N N 50 CYS CB SG sing N N 51 CYS CB HB2 sing N N 52 CYS CB HB3 sing N N 53 CYS SG HG sing N N 54 CYS OXT HXT sing N N 55 GLN N CA sing N N 56 GLN N H sing N N 57 GLN N H2 sing N N 58 GLN CA C sing N N 59 GLN CA CB sing N N 60 GLN CA HA sing N N 61 GLN C O doub N N 62 GLN C OXT sing N N 63 GLN CB CG sing N N 64 GLN CB HB2 sing N N 65 GLN CB HB3 sing N N 66 GLN CG CD sing N N 67 GLN CG HG2 sing N N 68 GLN CG HG3 sing N N 69 GLN CD OE1 doub N N 70 GLN CD NE2 sing N N 71 GLN NE2 HE21 sing N N 72 GLN NE2 HE22 sing N N 73 GLN OXT HXT sing N N 74 GLY N CA sing N N 75 GLY N H sing N N 76 GLY N H2 sing N N 77 GLY CA C sing N N 78 GLY CA HA2 sing N N 79 GLY CA HA3 sing N N 80 GLY C O doub N N 81 GLY C OXT sing N N 82 GLY OXT HXT sing N N 83 ILE N CA sing N N 84 ILE N H sing N N 85 ILE N H2 sing N N 86 ILE CA C sing N N 87 ILE CA CB sing N N 88 ILE CA HA sing N N 89 ILE C O doub N N 90 ILE C OXT sing N N 91 ILE CB CG1 sing N N 92 ILE CB CG2 sing N N 93 ILE CB HB sing N N 94 ILE CG1 CD1 sing N N 95 ILE CG1 HG12 sing N N 96 ILE CG1 HG13 sing N N 97 ILE CG2 HG21 sing N N 98 ILE CG2 HG22 sing N N 99 ILE CG2 HG23 sing N N 100 ILE CD1 HD11 sing N N 101 ILE CD1 HD12 sing N N 102 ILE CD1 HD13 sing N N 103 ILE OXT HXT sing N N 104 LYS N CA sing N N 105 LYS N H sing N N 106 LYS N H2 sing N N 107 LYS CA C sing N N 108 LYS CA CB sing N N 109 LYS CA HA sing N N 110 LYS C O doub N N 111 LYS C OXT sing N N 112 LYS CB CG sing N N 113 LYS CB HB2 sing N N 114 LYS CB HB3 sing N N 115 LYS CG CD sing N N 116 LYS CG HG2 sing N N 117 LYS CG HG3 sing N N 118 LYS CD CE sing N N 119 LYS CD HD2 sing N N 120 LYS CD HD3 sing N N 121 LYS CE NZ sing N N 122 LYS CE HE2 sing N N 123 LYS CE HE3 sing N N 124 LYS NZ HZ1 sing N N 125 LYS NZ HZ2 sing N N 126 LYS NZ HZ3 sing N N 127 LYS OXT HXT sing N N 128 MET N CA sing N N 129 MET N H sing N N 130 MET N H2 sing N N 131 MET CA C sing N N 132 MET CA CB sing N N 133 MET CA HA sing N N 134 MET C O doub N N 135 MET C OXT sing N N 136 MET CB CG sing N N 137 MET CB HB2 sing N N 138 MET CB HB3 sing N N 139 MET CG SD sing N N 140 MET CG HG2 sing N N 141 MET CG HG3 sing N N 142 MET SD CE sing N N 143 MET CE HE1 sing N N 144 MET CE HE2 sing N N 145 MET CE HE3 sing N N 146 MET OXT HXT sing N N 147 PHE N CA sing N N 148 PHE N H sing N N 149 PHE N H2 sing N N 150 PHE CA C sing N N 151 PHE CA CB sing N N 152 PHE CA HA sing N N 153 PHE C O doub N N 154 PHE C OXT sing N N 155 PHE CB CG sing N N 156 PHE CB HB2 sing N N 157 PHE CB HB3 sing N N 158 PHE CG CD1 doub Y N 159 PHE CG CD2 sing Y N 160 PHE CD1 CE1 sing Y N 161 PHE CD1 HD1 sing N N 162 PHE CD2 CE2 doub Y N 163 PHE CD2 HD2 sing N N 164 PHE CE1 CZ doub Y N 165 PHE CE1 HE1 sing N N 166 PHE CE2 CZ sing Y N 167 PHE CE2 HE2 sing N N 168 PHE CZ HZ sing N N 169 PHE OXT HXT sing N N 170 PRO N CA sing N N 171 PRO N CD sing N N 172 PRO N H sing N N 173 PRO CA C sing N N 174 PRO CA CB sing N N 175 PRO CA HA sing N N 176 PRO C O doub N N 177 PRO C OXT sing N N 178 PRO CB CG sing N N 179 PRO CB HB2 sing N N 180 PRO CB HB3 sing N N 181 PRO CG CD sing N N 182 PRO CG HG2 sing N N 183 PRO CG HG3 sing N N 184 PRO CD HD2 sing N N 185 PRO CD HD3 sing N N 186 PRO OXT HXT sing N N 187 SER N CA sing N N 188 SER N H sing N N 189 SER N H2 sing N N 190 SER CA C sing N N 191 SER CA CB sing N N 192 SER CA HA sing N N 193 SER C O doub N N 194 SER C OXT sing N N 195 SER CB OG sing N N 196 SER CB HB2 sing N N 197 SER CB HB3 sing N N 198 SER OG HG sing N N 199 SER OXT HXT sing N N 200 THR N CA sing N N 201 THR N H sing N N 202 THR N H2 sing N N 203 THR CA C sing N N 204 THR CA CB sing N N 205 THR CA HA sing N N 206 THR C O doub N N 207 THR C OXT sing N N 208 THR CB OG1 sing N N 209 THR CB CG2 sing N N 210 THR CB HB sing N N 211 THR OG1 HG1 sing N N 212 THR CG2 HG21 sing N N 213 THR CG2 HG22 sing N N 214 THR CG2 HG23 sing N N 215 THR OXT HXT sing N N 216 TYR N CA sing N N 217 TYR N H sing N N 218 TYR N H2 sing N N 219 TYR CA C sing N N 220 TYR CA CB sing N N 221 TYR CA HA sing N N 222 TYR C O doub N N 223 TYR C OXT sing N N 224 TYR CB CG sing N N 225 TYR CB HB2 sing N N 226 TYR CB HB3 sing N N 227 TYR CG CD1 doub Y N 228 TYR CG CD2 sing Y N 229 TYR CD1 CE1 sing Y N 230 TYR CD1 HD1 sing N N 231 TYR CD2 CE2 doub Y N 232 TYR CD2 HD2 sing N N 233 TYR CE1 CZ doub Y N 234 TYR CE1 HE1 sing N N 235 TYR CE2 CZ sing Y N 236 TYR CE2 HE2 sing N N 237 TYR CZ OH sing N N 238 TYR OH HH sing N N 239 TYR OXT HXT sing N N 240 VAL N CA sing N N 241 VAL N H sing N N 242 VAL N H2 sing N N 243 VAL CA C sing N N 244 VAL CA CB sing N N 245 VAL CA HA sing N N 246 VAL C O doub N N 247 VAL C OXT sing N N 248 VAL CB CG1 sing N N 249 VAL CB CG2 sing N N 250 VAL CB HB sing N N 251 VAL CG1 HG11 sing N N 252 VAL CG1 HG12 sing N N 253 VAL CG1 HG13 sing N N 254 VAL CG2 HG21 sing N N 255 VAL CG2 HG22 sing N N 256 VAL CG2 HG23 sing N N 257 VAL OXT HXT sing N N 258 # _pdbx_audit_support.funding_organization 'Ministry of Education (Singapore)' _pdbx_audit_support.country Singapore _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model DRX _pdbx_nmr_spectrometer.type ? _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 600 _pdbx_nmr_spectrometer.details ? # _atom_sites.entry_id 6AFQ _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_