HEADER REPLICATION 23-AUG-18 6AIG TITLE CRYSTAL STRUCTURE OF PCNA1 FROM AEROPYRUM PERNIX COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA POLYMERASE SLIDING CLAMP 1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PROLIFERATING CELL NUCLEAR ANTIGEN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: AEROPYRUM PERNIX K1; SOURCE 3 ORGANISM_TAXID: 272557; SOURCE 4 STRAIN: K1; SOURCE 5 GENE: APE_0162; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI K-12; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 83333; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: K-12; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET-11A KEYWDS MONOMER, REPLICATION EXPDTA X-RAY DIFFRACTION AUTHOR T.YAMAUCHI,M.KIKUCHI,M.TSUNODA REVDAT 3 29-NOV-23 6AIG 1 REMARK REVDAT 2 28-JUN-23 6AIG 1 REMARK REVDAT 1 26-SEP-18 6AIG 0 JRNL AUTH T.YAMAUCHI,M.KIKUCHI,M.TSUNODA JRNL TITL CRYSTAL STRUCTURE OF PCNA1 FROM AEROPYRUM PERNIX JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0230 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.86 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 19446 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.187 REMARK 3 R VALUE (WORKING SET) : 0.185 REMARK 3 FREE R VALUE : 0.226 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 991 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1403 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.93 REMARK 3 BIN R VALUE (WORKING SET) : 0.1960 REMARK 3 BIN FREE R VALUE SET COUNT : 69 REMARK 3 BIN FREE R VALUE : 0.2510 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1959 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 63 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.65 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.01000 REMARK 3 B22 (A**2) : -0.01000 REMARK 3 B33 (A**2) : 0.02000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.161 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.149 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.096 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.353 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.950 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.928 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2018 ; 0.014 ; 0.014 REMARK 3 BOND LENGTHS OTHERS (A): 1912 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2743 ; 1.583 ; 1.654 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4445 ; 1.002 ; 1.632 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 267 ; 6.842 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 95 ;28.702 ;19.895 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 353 ;15.109 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 19 ;17.376 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 275 ; 0.081 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2273 ; 0.009 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 363 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1041 ; 2.891 ; 2.595 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1040 ; 2.885 ; 2.592 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1302 ; 4.074 ; 3.873 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1303 ; 4.073 ; 3.876 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 975 ; 4.160 ; 3.121 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 976 ; 4.158 ; 3.123 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1437 ; 6.401 ; 4.456 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 2098 ; 7.976 ;30.885 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 2088 ; 7.973 ;30.807 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 6AIG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 28-AUG-18. REMARK 100 THE DEPOSITION ID IS D_1300007345. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-FEB-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-1A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.1 REMARK 200 MONOCHROMATOR : CRYO-COOLED CHANNEL-CUT SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 4M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS VERSION NOV 11, 2017 REMARK 200 DATA SCALING SOFTWARE : XDS VERSION NOV 11,2017 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20195 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 48.860 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 12.50 REMARK 200 R MERGE (I) : 0.04800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 34.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.05 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 13.40 REMARK 200 R MERGE FOR SHELL (I) : 0.16400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 15.00 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 1IZ4 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.63 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.44 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: MCILVAINE BUFFER, LITHIUM SULFATE, REMARK 280 ISOPROPANOL, PH 4.4, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 60.42850 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 34.51400 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 34.51400 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 90.64275 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 34.51400 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 34.51400 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 30.21425 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 34.51400 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 34.51400 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 90.64275 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 34.51400 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 34.51400 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 30.21425 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 60.42850 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 SER A 3 REMARK 465 GLU A 4 REMARK 465 GLY A 263 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 10 CB CG CD OE1 OE2 REMARK 470 LYS A 15 CE NZ REMARK 470 ARG A 19 CZ NH1 NH2 REMARK 470 LYS A 23 CD CE NZ REMARK 470 LYS A 26 CE NZ REMARK 470 GLU A 46 CG CD OE1 OE2 REMARK 470 GLU A 64 CG CD OE1 OE2 REMARK 470 GLU A 80 CG CD OE1 OE2 REMARK 470 ARG A 97 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 99 CD CE NZ REMARK 470 LYS A 100 CD CE NZ REMARK 470 ARG A 109 CZ NH1 NH2 REMARK 470 GLU A 110 CD OE1 OE2 REMARK 470 GLU A 131 CD REMARK 470 LEU A 142 CG CD1 CD2 REMARK 470 GLU A 143 CG CD OE1 OE2 REMARK 470 ASP A 153 CG OD1 OD2 REMARK 470 ASP A 172 CG OD1 OD2 REMARK 470 GLU A 175 CG CD OE1 OE2 REMARK 470 GLU A 197 CG CD OE1 OE2 REMARK 470 ASP A 203 OD1 OD2 REMARK 470 GLU A 205 CG CD OE1 OE2 REMARK 470 LYS A 207 NZ REMARK 470 ILE A 232 CD1 REMARK 470 THR A 262 OG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 329 O HOH A 355 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 188 NE - CZ - NH2 ANGL. DEV. = -3.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 119 -139.54 -121.04 REMARK 500 VAL A 183 -168.51 -125.58 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 189 0.08 SIDE CHAIN REMARK 500 ARG A 221 0.08 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL DBREF 6AIG A 17 263 UNP Q9YFT8 PCNA1_AERPE 1 247 SEQADV 6AIG MET A 1 UNP Q9YFT8 INITIATING METHIONINE SEQADV 6AIG SER A 2 UNP Q9YFT8 EXPRESSION TAG SEQADV 6AIG SER A 3 UNP Q9YFT8 EXPRESSION TAG SEQADV 6AIG GLU A 4 UNP Q9YFT8 EXPRESSION TAG SEQADV 6AIG ALA A 5 UNP Q9YFT8 EXPRESSION TAG SEQADV 6AIG THR A 6 UNP Q9YFT8 EXPRESSION TAG SEQADV 6AIG LEU A 7 UNP Q9YFT8 EXPRESSION TAG SEQADV 6AIG ASP A 8 UNP Q9YFT8 EXPRESSION TAG SEQADV 6AIG SER A 9 UNP Q9YFT8 EXPRESSION TAG SEQADV 6AIG GLU A 10 UNP Q9YFT8 EXPRESSION TAG SEQADV 6AIG PHE A 11 UNP Q9YFT8 EXPRESSION TAG SEQADV 6AIG THR A 12 UNP Q9YFT8 EXPRESSION TAG SEQADV 6AIG ASP A 13 UNP Q9YFT8 EXPRESSION TAG SEQADV 6AIG TYR A 14 UNP Q9YFT8 EXPRESSION TAG SEQADV 6AIG LYS A 15 UNP Q9YFT8 EXPRESSION TAG SEQADV 6AIG ALA A 16 UNP Q9YFT8 EXPRESSION TAG SEQRES 1 A 263 MET SER SER GLU ALA THR LEU ASP SER GLU PHE THR ASP SEQRES 2 A 263 TYR LYS ALA MET PHE ARG TYR GLU ALA LYS VAL PHE LYS SEQRES 3 A 263 GLU LEU VAL ASP SER VAL SER LYS ILE LEU ASP GLU GLY SEQRES 4 A 263 LEU PHE ILE ILE THR GLY GLU GLY LEU ARG LEU ARG GLY SEQRES 5 A 263 MET ASP PRO ALA ARG VAL ALA LEU VAL ASP ILE GLU ILE SEQRES 6 A 263 PRO SER SER SER PHE PHE ASP PHE TYR MET ALA GLY ASP SEQRES 7 A 263 VAL GLU ARG VAL GLU LEU GLY VAL ASN MET GLU THR LEU SEQRES 8 A 263 LYS GLY VAL VAL ALA ARG ALA LYS LYS GLY ASP GLN LEU SEQRES 9 A 263 GLU VAL ARG VAL ARG GLU ASP LYS VAL LEU PHE ILE VAL SEQRES 10 A 263 GLU SER VAL VAL LEU ARG ARG TYR LEU LEU PRO ASN LEU SEQRES 11 A 263 GLU VAL ILE VAL ASP VAL PRO GLU ASP ILE SER LEU GLU SEQRES 12 A 263 PHE ASP ALA THR ALA THR VAL ILE ALA ASP VAL VAL LYS SEQRES 13 A 263 LYS THR LEU ARG ASP VAL GLU LEU VAL GLY ASP ILE VAL SEQRES 14 A 263 GLU PHE ASP ALA GLY GLU ASP TYR LEU SER ILE ARG SER SEQRES 15 A 263 VAL GLY PRO GLU ARG ARG ARG VAL GLU THR ARG LEU THR SEQRES 16 A 263 ARG GLU SER PRO ALA LEU ILE ASP LEU GLU VAL LYS GLU SEQRES 17 A 263 PRO ALA THR SER ARG TYR ASP VAL GLY TYR LEU LYS ARG SEQRES 18 A 263 MET LEU GLY VAL ALA LYS ILE ALA GLU SER ILE GLU LEU SEQRES 19 A 263 SER PHE SER THR ASP LYS PRO LEU LYS MET VAL PHE LYS SEQRES 20 A 263 SER PRO ASP GLY SER ARG VAL THR TYR LEU LEU ALA PRO SEQRES 21 A 263 SER THR GLY FORMUL 2 HOH *63(H2 O) HELIX 1 AA1 ALA A 22 LYS A 34 1 13 HELIX 2 AA2 SER A 68 PHE A 70 5 3 HELIX 3 AA3 MET A 88 ALA A 96 1 9 HELIX 4 AA4 ALA A 152 GLY A 166 1 15 HELIX 5 AA5 VAL A 216 LEU A 223 1 8 HELIX 6 AA6 GLY A 224 ALA A 229 5 6 SHEET 1 AA1 5 ASP A 72 MET A 75 0 SHEET 2 AA1 5 ALA A 16 GLU A 21 -1 N MET A 17 O TYR A 74 SHEET 3 AA1 5 GLN A 103 VAL A 108 -1 O LEU A 104 N TYR A 20 SHEET 4 AA1 5 LYS A 112 GLU A 118 -1 O ILE A 116 N GLU A 105 SHEET 5 AA1 5 LEU A 122 PRO A 128 -1 O LEU A 127 N VAL A 113 SHEET 1 AA2 9 ARG A 81 ASN A 87 0 SHEET 2 AA2 9 GLU A 38 THR A 44 -1 N GLY A 39 O VAL A 86 SHEET 3 AA2 9 GLY A 47 MET A 53 -1 O ARG A 49 N ILE A 42 SHEET 4 AA2 9 ALA A 59 PRO A 66 -1 O ILE A 63 N LEU A 50 SHEET 5 AA2 9 ARG A 253 LEU A 258 -1 O THR A 255 N ASP A 62 SHEET 6 AA2 9 LEU A 242 LYS A 247 -1 N PHE A 246 O VAL A 254 SHEET 7 AA2 9 SER A 231 PHE A 236 -1 N SER A 235 O LYS A 243 SHEET 8 AA2 9 ALA A 146 ILE A 151 -1 N ALA A 148 O LEU A 234 SHEET 9 AA2 9 LEU A 201 VAL A 206 -1 O GLU A 205 N THR A 147 SHEET 1 AA3 4 GLU A 191 THR A 195 0 SHEET 2 AA3 4 TYR A 177 SER A 182 -1 N LEU A 178 O LEU A 194 SHEET 3 AA3 4 ILE A 168 GLY A 174 -1 N ASP A 172 O SER A 179 SHEET 4 AA3 4 ALA A 210 ASP A 215 -1 O ALA A 210 N ALA A 173 CISPEP 1 ARG A 187 ARG A 188 0 -4.47 CRYST1 69.028 69.028 120.857 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014487 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014487 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008274 0.00000