HEADER MEMBRANE PROTEIN, HYDROLASE 27-AUG-18 6AJF TITLE CRYSTAL STRUCTURE OF MYCOLIC ACID TRANSPORTER MMPL3 FROM MYCOBACTERIUM TITLE 2 SMEGMATIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: DRUG EXPORTERS OF THE RND SUPERFAMILY-LIKE PROTEIN, COMPND 3 ENDOLYSIN; COMPND 4 CHAIN: A; COMPND 5 SYNONYM: LYSIS PROTEIN,LYSOZYME,MURAMIDASE; COMPND 6 EC: 3.2.1.17; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM SMEGMATIS STR. MC2 155, SOURCE 3 ENTEROBACTERIA PHAGE T4; SOURCE 4 ORGANISM_COMMON: BACTERIOPHAGE T4; SOURCE 5 ORGANISM_TAXID: 246196, 10665; SOURCE 6 STRAIN: ATCC 700084 / MC(2)155; SOURCE 7 GENE: MMPL3, MSMEI_0243, E, T4TP126; SOURCE 8 EXPRESSION_SYSTEM: MYCOBACTERIUM SMEGMATIS STR. MC2 155; SOURCE 9 EXPRESSION_SYSTEM_TAXID: 246196 KEYWDS MEMBRANE PROTEIN, TRANSPORTER, RND FAMILY, CELL WALL BIOSYNTHESIS, KEYWDS 2 DRUG TARGET, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR B.ZHANG,J.LI,X.L.YANG,L.J.WU,H.T.YANG,Z.H.RAO REVDAT 3 27-MAR-24 6AJF 1 REMARK REVDAT 2 13-FEB-19 6AJF 1 JRNL REVDAT 1 26-DEC-18 6AJF 0 JRNL AUTH B.ZHANG,J.LI,X.YANG,L.WU,J.ZHANG,Y.YANG,Y.ZHAO,L.ZHANG, JRNL AUTH 2 X.YANG,X.YANG,X.CHENG,Z.LIU,B.JIANG,H.JIANG,L.W.GUDDAT, JRNL AUTH 3 H.YANG,Z.RAO JRNL TITL CRYSTAL STRUCTURES OF MEMBRANE TRANSPORTER MMPL3, AN ANTI-TB JRNL TITL 2 DRUG TARGET. JRNL REF CELL V. 176 636 2019 JRNL REFN ISSN 1097-4172 JRNL PMID 30682372 JRNL DOI 10.1016/J.CELL.2019.01.003 REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.24 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 46708 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.224 REMARK 3 R VALUE (WORKING SET) : 0.223 REMARK 3 FREE R VALUE : 0.249 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.970 REMARK 3 FREE R VALUE TEST SET COUNT : 2320 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 41.2481 - 6.9278 0.99 2801 136 0.2213 0.1986 REMARK 3 2 6.9278 - 5.5030 1.00 2699 130 0.2298 0.2959 REMARK 3 3 5.5030 - 4.8085 1.00 2638 136 0.2092 0.2262 REMARK 3 4 4.8085 - 4.3694 1.00 2635 151 0.1816 0.2063 REMARK 3 5 4.3694 - 4.0565 1.00 2628 127 0.1983 0.2571 REMARK 3 6 4.0565 - 3.8176 1.00 2617 134 0.2093 0.2258 REMARK 3 7 3.8176 - 3.6265 1.00 2600 133 0.2152 0.2569 REMARK 3 8 3.6265 - 3.4687 1.00 2623 129 0.2334 0.2676 REMARK 3 9 3.4687 - 3.3352 1.00 2634 91 0.2375 0.2589 REMARK 3 10 3.3352 - 3.2202 1.00 2598 133 0.2398 0.2856 REMARK 3 11 3.2202 - 3.1195 1.00 2568 153 0.2538 0.3054 REMARK 3 12 3.1195 - 3.0304 1.00 2593 138 0.2761 0.2878 REMARK 3 13 3.0304 - 2.9506 1.00 2597 130 0.2724 0.3102 REMARK 3 14 2.9506 - 2.8787 1.00 2519 175 0.2786 0.3340 REMARK 3 15 2.8787 - 2.8132 1.00 2584 129 0.2690 0.3097 REMARK 3 16 2.8132 - 2.7534 1.00 2581 148 0.2872 0.3496 REMARK 3 17 2.7534 - 2.6983 0.98 2473 147 0.3120 0.3701 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.350 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.060 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 76.16 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 89.67 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 7267 REMARK 3 ANGLE : 1.009 9861 REMARK 3 CHIRALITY : 0.035 1129 REMARK 3 PLANARITY : 0.004 1228 REMARK 3 DIHEDRAL : 21.430 2825 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID -4 THROUGH 207 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.7995 -34.4124 -57.2939 REMARK 3 T TENSOR REMARK 3 T11: 0.4852 T22: 0.5045 REMARK 3 T33: 0.5458 T12: 0.0164 REMARK 3 T13: -0.0522 T23: 0.0005 REMARK 3 L TENSOR REMARK 3 L11: 0.7563 L22: 3.2294 REMARK 3 L33: 2.2281 L12: 0.1391 REMARK 3 L13: -0.0657 L23: 2.1624 REMARK 3 S TENSOR REMARK 3 S11: -0.0381 S12: -0.0292 S13: -0.1097 REMARK 3 S21: -0.3353 S22: -0.1283 S23: 0.1600 REMARK 3 S31: -0.1380 S32: -0.3095 S33: 0.1920 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 208 THROUGH 470 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.6761 -21.7292 -36.7726 REMARK 3 T TENSOR REMARK 3 T11: 0.3785 T22: 0.5565 REMARK 3 T33: 0.4509 T12: -0.0057 REMARK 3 T13: 0.0214 T23: -0.0532 REMARK 3 L TENSOR REMARK 3 L11: 1.3580 L22: 3.2895 REMARK 3 L33: 2.1496 L12: 0.4419 REMARK 3 L13: 0.1738 L23: 1.7131 REMARK 3 S TENSOR REMARK 3 S11: 0.0003 S12: -0.4356 S13: 0.0381 REMARK 3 S21: 0.3166 S22: -0.2524 S23: 0.5493 REMARK 3 S31: 0.0867 S32: -0.2787 S33: 0.1964 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 471 THROUGH 583 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.2179 -53.5677 -41.3866 REMARK 3 T TENSOR REMARK 3 T11: 0.8584 T22: 0.5892 REMARK 3 T33: 0.6921 T12: 0.0582 REMARK 3 T13: -0.0296 T23: 0.2011 REMARK 3 L TENSOR REMARK 3 L11: 1.5075 L22: 3.5582 REMARK 3 L33: 2.7539 L12: -0.0105 REMARK 3 L13: -0.2504 L23: 2.1199 REMARK 3 S TENSOR REMARK 3 S11: -0.2484 S12: -0.0705 S13: -0.5367 REMARK 3 S21: 0.7526 S22: -0.0206 S23: -0.0152 REMARK 3 S31: 1.1470 S32: 0.1807 S33: 0.0036 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 584 THROUGH 734 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.4183 -22.7796 -25.9513 REMARK 3 T TENSOR REMARK 3 T11: 0.7482 T22: 0.8083 REMARK 3 T33: 0.5335 T12: -0.2181 REMARK 3 T13: 0.1229 T23: -0.1468 REMARK 3 L TENSOR REMARK 3 L11: 0.7530 L22: 3.0959 REMARK 3 L33: 2.0882 L12: 0.0070 REMARK 3 L13: 0.2305 L23: 1.4999 REMARK 3 S TENSOR REMARK 3 S11: 0.2450 S12: -0.4815 S13: 0.2605 REMARK 3 S21: 0.9289 S22: -0.7359 S23: 0.7003 REMARK 3 S31: 0.3955 S32: -0.7136 S33: 0.4111 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 735 THROUGH 928 ) REMARK 3 ORIGIN FOR THE GROUP (A): 28.1039 20.1330 -9.8299 REMARK 3 T TENSOR REMARK 3 T11: 0.4364 T22: 0.6765 REMARK 3 T33: 0.6036 T12: 0.0175 REMARK 3 T13: 0.0125 T23: -0.0253 REMARK 3 L TENSOR REMARK 3 L11: 0.3081 L22: 2.1238 REMARK 3 L33: 2.8488 L12: 0.3126 REMARK 3 L13: -0.0410 L23: 0.6334 REMARK 3 S TENSOR REMARK 3 S11: 0.0099 S12: 0.3329 S13: 0.0192 REMARK 3 S21: -0.1289 S22: -0.1093 S23: -0.0614 REMARK 3 S31: -0.1650 S32: 0.1956 S33: 0.1014 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6AJF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 07-SEP-18. REMARK 100 THE DEPOSITION ID IS D_1300008839. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-FEB-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL19U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97853 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 46808 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.698 REMARK 200 RESOLUTION RANGE LOW (A) : 98.385 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 13.30 REMARK 200 R MERGE (I) : 0.06600 REMARK 200 R SYM (I) : 0.06600 REMARK 200 FOR THE DATA SET : 23.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.84 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.1 REMARK 200 DATA REDUNDANCY IN SHELL : 13.40 REMARK 200 R MERGE FOR SHELL (I) : 0.73900 REMARK 200 R SYM FOR SHELL (I) : 0.73900 REMARK 200 FOR SHELL : 1.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: AUTOSOL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 69.38 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.02 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10%-20% (V/V) POLYETHYLENE GLYCOL REMARK 280 MONOMETHYL ETHER 350 (PEGMME 350), 50 MM ADA (N-(2-ACETAMIDO) REMARK 280 IMINODIACETIC ACID) (PH 6.0-7.0) AND 7.5%-17.5% (V/V) REMARK 280 POLYETHYLENE GLYCOL 2000 (PEG2000), VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 43.16000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 69.97500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 69.16900 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 69.97500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 43.16000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 69.16900 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 310 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 38730 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -12 REMARK 465 PRO A -11 REMARK 465 GLU A -10 REMARK 465 VAL A -9 REMARK 465 VAL A -8 REMARK 465 GLY A -7 REMARK 465 SER A -6 REMARK 465 TYR A -5 REMARK 465 ILE A 356 REMARK 465 PRO A 357 REMARK 465 PHE A 358 REMARK 465 LEU A 359 REMARK 465 ALA A 360 REMARK 465 ASN A 361 REMARK 465 TRP A 362 REMARK 465 GLN A 363 REMARK 465 PHE A 364 REMARK 465 SER A 365 REMARK 465 ARG A 366 REMARK 465 ARG A 367 REMARK 465 ILE A 368 REMARK 465 ILE A 369 REMARK 465 ASP A 370 REMARK 465 TRP A 371 REMARK 465 PHE A 372 REMARK 465 ALA A 373 REMARK 465 GLU A 374 REMARK 465 LYS A 375 REMARK 465 THR A 376 REMARK 465 GLN A 377 REMARK 465 LYS A 378 REMARK 465 THR A 379 REMARK 465 LYS A 380 REMARK 465 THR A 381 REMARK 465 ARG A 382 REMARK 465 GLU A 383 REMARK 465 GLU A 384 REMARK 465 VAL A 385 REMARK 465 GLU A 386 REMARK 465 ARG A 387 REMARK 465 HIS A 929 REMARK 465 HIS A 930 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU A 659 CH2 TRP A 737 1.92 REMARK 500 NH1 ARG A 288 O ALA A 582 1.98 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 739 C - N - CA ANGL. DEV. = 10.4 DEGREES REMARK 500 PRO A 739 C - N - CD ANGL. DEV. = -13.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 101 48.75 -141.88 REMARK 500 THR A 332 -79.29 -119.94 REMARK 500 ASP A 346 30.49 -90.23 REMARK 500 ALA A 347 -75.76 -70.83 REMARK 500 LEU A 354 -58.61 -132.52 REMARK 500 ARG A 400 45.66 -149.15 REMARK 500 ALA A 405 -70.91 -55.61 REMARK 500 ASN A 522 -2.36 73.98 REMARK 500 ARG A 523 53.98 25.55 REMARK 500 ASN A 524 -33.38 -137.89 REMARK 500 THR A 717 -75.05 -107.00 REMARK 500 ALA A 738 -90.39 -112.31 REMARK 500 PRO A 739 -163.39 -69.36 REMARK 500 ARG A 801 141.62 -173.83 REMARK 500 ASN A 804 39.41 36.42 REMARK 500 PHE A 863 46.78 -86.18 REMARK 500 PHE A 912 58.94 -146.21 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MHA A 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MHA A 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue L6T A 1003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue L6T A 1004 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue L6T A 1005 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue L6T A 1006 DBREF 6AJF A 1 748 UNP I7G2R2 I7G2R2_MYCS2 1 748 DBREF 6AJF A 751 910 UNP D9IEF7 D9IEF7_BPT4 2 161 SEQADV 6AJF MET A -12 UNP I7G2R2 EXPRESSION TAG SEQADV 6AJF PRO A -11 UNP I7G2R2 EXPRESSION TAG SEQADV 6AJF GLU A -10 UNP I7G2R2 EXPRESSION TAG SEQADV 6AJF VAL A -9 UNP I7G2R2 EXPRESSION TAG SEQADV 6AJF VAL A -8 UNP I7G2R2 EXPRESSION TAG SEQADV 6AJF GLY A -7 UNP I7G2R2 EXPRESSION TAG SEQADV 6AJF SER A -6 UNP I7G2R2 EXPRESSION TAG SEQADV 6AJF TYR A -5 UNP I7G2R2 EXPRESSION TAG SEQADV 6AJF PHE A -4 UNP I7G2R2 EXPRESSION TAG SEQADV 6AJF GLN A -3 UNP I7G2R2 EXPRESSION TAG SEQADV 6AJF SER A -2 UNP I7G2R2 EXPRESSION TAG SEQADV 6AJF ASN A -1 UNP I7G2R2 EXPRESSION TAG SEQADV 6AJF ALA A 0 UNP I7G2R2 EXPRESSION TAG SEQADV 6AJF GLU A 749 UNP I7G2R2 LINKER SEQADV 6AJF PHE A 750 UNP I7G2R2 LINKER SEQADV 6AJF THR A 803 UNP D9IEF7 CYS 54 ENGINEERED MUTATION SEQADV 6AJF ALA A 846 UNP D9IEF7 CYS 97 ENGINEERED MUTATION SEQADV 6AJF GLU A 911 UNP D9IEF7 EXPRESSION TAG SEQADV 6AJF PHE A 912 UNP D9IEF7 EXPRESSION TAG SEQADV 6AJF HIS A 913 UNP D9IEF7 EXPRESSION TAG SEQADV 6AJF LEU A 914 UNP D9IEF7 EXPRESSION TAG SEQADV 6AJF GLY A 915 UNP D9IEF7 EXPRESSION TAG SEQADV 6AJF GLY A 916 UNP D9IEF7 EXPRESSION TAG SEQADV 6AJF ILE A 917 UNP D9IEF7 EXPRESSION TAG SEQADV 6AJF LYS A 918 UNP D9IEF7 EXPRESSION TAG SEQADV 6AJF ALA A 919 UNP D9IEF7 EXPRESSION TAG SEQADV 6AJF PHE A 920 UNP D9IEF7 EXPRESSION TAG SEQADV 6AJF HIS A 921 UNP D9IEF7 EXPRESSION TAG SEQADV 6AJF HIS A 922 UNP D9IEF7 EXPRESSION TAG SEQADV 6AJF HIS A 923 UNP D9IEF7 EXPRESSION TAG SEQADV 6AJF HIS A 924 UNP D9IEF7 EXPRESSION TAG SEQADV 6AJF HIS A 925 UNP D9IEF7 EXPRESSION TAG SEQADV 6AJF HIS A 926 UNP D9IEF7 EXPRESSION TAG SEQADV 6AJF HIS A 927 UNP D9IEF7 EXPRESSION TAG SEQADV 6AJF HIS A 928 UNP D9IEF7 EXPRESSION TAG SEQADV 6AJF HIS A 929 UNP D9IEF7 EXPRESSION TAG SEQADV 6AJF HIS A 930 UNP D9IEF7 EXPRESSION TAG SEQRES 1 A 943 MET PRO GLU VAL VAL GLY SER TYR PHE GLN SER ASN ALA SEQRES 2 A 943 MET PHE ALA TRP TRP GLY ARG THR VAL TYR GLN PHE ARG SEQRES 3 A 943 TYR ILE VAL ILE GLY VAL MET VAL ALA LEU CYS LEU GLY SEQRES 4 A 943 GLY GLY VAL TYR GLY ILE SER LEU GLY ASN HIS VAL THR SEQRES 5 A 943 GLN SER GLY PHE TYR ASP GLU GLY SER GLN SER VAL ALA SEQRES 6 A 943 ALA SER LEU ILE GLY ASP GLU VAL TYR GLY ARG ASP ARG SEQRES 7 A 943 THR SER HIS VAL VAL ALA ILE LEU THR PRO PRO ASP ASP SEQRES 8 A 943 LYS LYS VAL THR ASP LYS ALA TRP GLN LYS LYS VAL THR SEQRES 9 A 943 GLU GLU LEU ASP GLN VAL VAL LYS ASP HIS GLU ASP GLN SEQRES 10 A 943 ILE VAL GLY TRP VAL GLY TRP LEU LYS ALA PRO ASP THR SEQRES 11 A 943 THR ASP PRO THR VAL SER ALA MET LYS THR GLN ASP LEU SEQRES 12 A 943 ARG HIS THR PHE ILE SER ILE PRO LEU GLN GLY ASP ASP SEQRES 13 A 943 ASP ASP GLU ILE LEU LYS ASN TYR GLN VAL VAL GLU PRO SEQRES 14 A 943 GLU LEU GLN GLN VAL ASN GLY GLY ASP ILE ARG LEU ALA SEQRES 15 A 943 GLY LEU ASN PRO LEU ALA SER GLU LEU THR GLY THR ILE SEQRES 16 A 943 GLY GLU ASP GLN LYS ARG ALA GLU VAL ALA ALA ILE PRO SEQRES 17 A 943 LEU VAL ALA VAL VAL LEU PHE PHE VAL PHE GLY THR VAL SEQRES 18 A 943 ILE ALA ALA ALA LEU PRO ALA ILE ILE GLY GLY LEU ALA SEQRES 19 A 943 ILE ALA GLY ALA LEU GLY ILE MET ARG LEU VAL ALA GLU SEQRES 20 A 943 PHE THR PRO VAL HIS PHE PHE ALA GLN PRO VAL VAL THR SEQRES 21 A 943 LEU ILE GLY LEU GLY ILE ALA ILE ASP TYR GLY LEU PHE SEQRES 22 A 943 ILE VAL SER ARG PHE ARG GLU GLU ILE ALA GLU GLY TYR SEQRES 23 A 943 ASP THR GLU ALA ALA VAL ARG ARG THR VAL MET THR SER SEQRES 24 A 943 GLY ARG THR VAL VAL PHE SER ALA VAL ILE ILE VAL ALA SEQRES 25 A 943 SER SER VAL PRO LEU LEU LEU PHE PRO GLN GLY PHE LEU SEQRES 26 A 943 LYS SER ILE THR TYR ALA ILE ILE ALA SER VAL MET LEU SEQRES 27 A 943 ALA ALA ILE LEU SER ILE THR VAL LEU ALA ALA ALA LEU SEQRES 28 A 943 ALA ILE LEU GLY PRO ARG VAL ASP ALA LEU GLY VAL THR SEQRES 29 A 943 THR LEU LEU LYS ILE PRO PHE LEU ALA ASN TRP GLN PHE SEQRES 30 A 943 SER ARG ARG ILE ILE ASP TRP PHE ALA GLU LYS THR GLN SEQRES 31 A 943 LYS THR LYS THR ARG GLU GLU VAL GLU ARG GLY PHE TRP SEQRES 32 A 943 GLY ARG LEU VAL ASN VAL VAL MET LYS ARG PRO ILE ALA SEQRES 33 A 943 PHE ALA ALA PRO ILE LEU VAL VAL MET VAL LEU LEU ILE SEQRES 34 A 943 ILE PRO LEU GLY GLN LEU SER LEU GLY GLY ILE SER GLU SEQRES 35 A 943 LYS TYR LEU PRO PRO ASP ASN ALA VAL ARG GLN SER GLN SEQRES 36 A 943 GLU GLN PHE ASP LYS LEU PHE PRO GLY PHE ARG THR GLU SEQRES 37 A 943 PRO LEU THR LEU VAL MET LYS ARG GLU ASP GLY GLU PRO SEQRES 38 A 943 ILE THR ASP ALA GLN ILE ALA ASP MET ARG ALA LYS ALA SEQRES 39 A 943 LEU THR VAL SER GLY PHE THR ASP PRO ASP ASN ASP PRO SEQRES 40 A 943 GLU LYS MET TRP LYS GLU ARG PRO ALA ASN ASP SER GLY SEQRES 41 A 943 SER LYS ASP PRO SER VAL ARG VAL ILE GLN ASN GLY LEU SEQRES 42 A 943 GLU ASN ARG ASN ASP ALA ALA LYS LYS ILE ASP GLU LEU SEQRES 43 A 943 ARG ALA LEU GLN PRO PRO HIS GLY ILE GLU VAL PHE VAL SEQRES 44 A 943 GLY GLY THR PRO ALA LEU GLU GLN ASP SER ILE HIS SER SEQRES 45 A 943 LEU PHE ASP LYS LEU PRO LEU MET ALA LEU ILE LEU ILE SEQRES 46 A 943 VAL THR THR THR VAL LEU MET PHE LEU ALA PHE GLY SER SEQRES 47 A 943 VAL VAL LEU PRO ILE LYS ALA ALA LEU MET SER ALA LEU SEQRES 48 A 943 THR LEU GLY SER THR MET GLY ILE LEU THR TRP MET PHE SEQRES 49 A 943 VAL ASP GLY HIS GLY SER GLY LEU MET ASN TYR THR PRO SEQRES 50 A 943 GLN PRO LEU MET ALA PRO MET ILE GLY LEU ILE ILE ALA SEQRES 51 A 943 VAL ILE TRP GLY LEU SER THR ASP TYR GLU VAL PHE LEU SEQRES 52 A 943 VAL SER ARG MET VAL GLU ALA ARG GLU ARG GLY MET SER SEQRES 53 A 943 THR ALA GLU ALA ILE ARG ILE GLY THR ALA THR THR GLY SEQRES 54 A 943 ARG LEU ILE THR GLY ALA ALA LEU ILE LEU ALA VAL VAL SEQRES 55 A 943 ALA GLY ALA PHE VAL PHE SER ASP LEU VAL MET MET LYS SEQRES 56 A 943 TYR LEU ALA PHE GLY LEU LEU ILE ALA LEU LEU LEU ASP SEQRES 57 A 943 ALA THR ILE ILE ARG MET PHE LEU VAL PRO ALA VAL MET SEQRES 58 A 943 LYS LEU LEU GLY ASP ASP CYS TRP TRP ALA PRO ARG TRP SEQRES 59 A 943 MET LYS ARG VAL GLN GLU LYS GLU PHE ASN ILE PHE GLU SEQRES 60 A 943 MET LEU ARG ILE ASP GLU GLY LEU ARG LEU LYS ILE TYR SEQRES 61 A 943 LYS ASP THR GLU GLY TYR TYR THR ILE GLY ILE GLY HIS SEQRES 62 A 943 LEU LEU THR LYS SER PRO SER LEU ASN ALA ALA LYS SER SEQRES 63 A 943 GLU LEU ASP LYS ALA ILE GLY ARG ASN THR ASN GLY VAL SEQRES 64 A 943 ILE THR LYS ASP GLU ALA GLU LYS LEU PHE ASN GLN ASP SEQRES 65 A 943 VAL ASP ALA ALA VAL ARG GLY ILE LEU ARG ASN ALA LYS SEQRES 66 A 943 LEU LYS PRO VAL TYR ASP SER LEU ASP ALA VAL ARG ARG SEQRES 67 A 943 ALA ALA LEU ILE ASN MET VAL PHE GLN MET GLY GLU THR SEQRES 68 A 943 GLY VAL ALA GLY PHE THR ASN SER LEU ARG MET LEU GLN SEQRES 69 A 943 GLN LYS ARG TRP ASP GLU ALA ALA VAL ASN LEU ALA LYS SEQRES 70 A 943 SER ARG TRP TYR ASN GLN THR PRO ASN ARG ALA LYS ARG SEQRES 71 A 943 VAL ILE THR THR PHE ARG THR GLY THR TRP ASP ALA TYR SEQRES 72 A 943 GLU PHE HIS LEU GLY GLY ILE LYS ALA PHE HIS HIS HIS SEQRES 73 A 943 HIS HIS HIS HIS HIS HIS HIS HET MHA A1001 13 HET MHA A1002 13 HET L6T A1003 35 HET L6T A1004 35 HET L6T A1005 35 HET L6T A1006 35 HETNAM MHA (CARBAMOYLMETHYL-CARBOXYMETHYL-AMINO)-ACETIC ACID HETNAM L6T ALPHA-D-GLUCOPYRANOSYL 6-O-DODECYL-ALPHA-D- HETNAM 2 L6T GLUCOPYRANOSIDE HETSYN MHA N-(2-ACETAMIDO)IMINODIACETIC ACID FORMUL 2 MHA 2(C6 H10 N2 O5) FORMUL 4 L6T 4(C24 H46 O11) HELIX 1 AA1 GLN A -3 PHE A 12 1 16 HELIX 2 AA2 PHE A 12 ILE A 32 1 21 HELIX 3 AA3 SER A 48 GLY A 62 1 15 HELIX 4 AA4 ASP A 83 HIS A 101 1 19 HELIX 5 AA5 LEU A 112 ALA A 114 5 3 HELIX 6 AA6 THR A 121 LYS A 126 5 6 HELIX 7 AA7 ASP A 143 GLN A 160 1 18 HELIX 8 AA8 VAL A 161 GLY A 164 5 4 HELIX 9 AA9 GLY A 170 ALA A 192 1 23 HELIX 10 AB1 ALA A 192 PHE A 205 1 14 HELIX 11 AB2 THR A 207 ALA A 233 1 27 HELIX 12 AB3 PHE A 241 ILE A 249 1 9 HELIX 13 AB4 ILE A 249 GLU A 271 1 23 HELIX 14 AB5 ASP A 274 VAL A 302 1 29 HELIX 15 AB6 PRO A 303 PHE A 307 5 5 HELIX 16 AB7 GLN A 309 ILE A 331 1 23 HELIX 17 AB8 THR A 332 GLY A 342 1 11 HELIX 18 AB9 PRO A 343 ALA A 347 5 5 HELIX 19 AC1 PHE A 389 LYS A 399 1 11 HELIX 20 AC2 ARG A 400 LEU A 415 1 16 HELIX 21 AC3 ILE A 416 LEU A 422 5 7 HELIX 22 AC4 SER A 428 LEU A 432 5 5 HELIX 23 AC5 ASN A 436 PHE A 449 1 14 HELIX 24 AC6 THR A 470 VAL A 484 1 15 HELIX 25 AC7 ASP A 525 LEU A 536 1 12 HELIX 26 AC8 GLY A 548 GLY A 584 1 37 HELIX 27 AC9 VAL A 586 VAL A 612 1 27 HELIX 28 AD1 ALA A 629 GLY A 661 1 33 HELIX 29 AD2 SER A 663 VAL A 694 1 32 HELIX 30 AD3 LEU A 698 THR A 717 1 20 HELIX 31 AD4 PHE A 722 GLY A 732 1 11 HELIX 32 AD5 ASP A 733 CYS A 735 5 3 HELIX 33 AD6 ASN A 751 GLU A 760 1 10 HELIX 34 AD7 SER A 787 GLY A 800 1 14 HELIX 35 AD8 THR A 808 LEU A 828 1 21 HELIX 36 AD9 LEU A 833 LEU A 840 1 8 HELIX 37 AE1 ASP A 841 GLY A 862 1 22 HELIX 38 AE2 PHE A 863 GLN A 872 1 10 HELIX 39 AE3 ARG A 874 ALA A 883 1 10 HELIX 40 AE4 SER A 885 THR A 891 1 7 HELIX 41 AE5 THR A 891 GLY A 905 1 15 HELIX 42 AE6 TRP A 907 PHE A 912 1 6 SHEET 1 AA1 4 VAL A 109 GLY A 110 0 SHEET 2 AA1 4 THR A 133 SER A 136 -1 O SER A 136 N VAL A 109 SHEET 3 AA1 4 VAL A 70 LEU A 73 -1 N LEU A 73 O THR A 133 SHEET 4 AA1 4 ILE A 166 ALA A 169 -1 O ALA A 169 N VAL A 70 SHEET 1 AA2 2 LEU A 424 GLY A 425 0 SHEET 2 AA2 2 LEU A 627 MET A 628 1 O LEU A 627 N GLY A 425 SHEET 1 AA3 4 LYS A 499 GLU A 500 0 SHEET 2 AA3 4 VAL A 513 ASN A 518 -1 O GLN A 517 N LYS A 499 SHEET 3 AA3 4 LEU A 457 ARG A 463 -1 N LEU A 459 O ILE A 516 SHEET 4 AA3 4 ILE A 542 GLY A 547 -1 O GLY A 547 N THR A 458 SHEET 1 AA4 3 ARG A 763 LYS A 768 0 SHEET 2 AA4 3 TYR A 774 GLY A 777 -1 O THR A 775 N TYR A 767 SHEET 3 AA4 3 HIS A 780 THR A 783 -1 O LEU A 782 N TYR A 774 SITE 1 AC1 8 ASP A 759 THR A 891 PRO A 892 ASN A 893 SITE 2 AC1 8 ARG A 894 ILE A 917 LYS A 918 ALA A 919 SITE 1 AC2 6 GLY A 862 PHE A 863 THR A 864 ASN A 865 SITE 2 AC2 6 SER A 866 ASN A 881 SITE 1 AC3 10 GLN A 40 TYR A 44 SER A 54 LEU A 55 SITE 2 AC3 10 ASP A 58 ARG A 63 ASP A 64 ASP A 144 SITE 3 AC3 10 LEU A 171 ILE A 427 SITE 1 AC4 5 ARG A 188 ALA A 192 ASN A 621 GLY A 691 SITE 2 AC4 5 PHE A 695 SITE 1 AC5 9 THR A 66 SER A 67 VAL A 70 VAL A 109 SITE 2 AC5 9 MET A 125 GLY A 170 LEU A 171 GLN A 442 SITE 3 AC5 9 ARG A 453 SITE 1 AC6 1 PHE A 235 CRYST1 86.320 138.338 139.950 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011585 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007229 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007145 0.00000