data_6AMB # _entry.id 6AMB # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6AMB pdb_00006amb 10.2210/pdb6amb/pdb WWPDB D_1000229382 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6AMB _pdbx_database_status.recvd_initial_deposition_date 2017-08-09 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Smith, M.J.' 1 ? 'Ishiyama, N.' 2 ? 'Ikura, M.' 3 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nat Commun' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2041-1723 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 8 _citation.language ? _citation.page_first 1099 _citation.page_last 1099 _citation.title 'Evolution of AF6-RAS association and its implications in mixed-lineage leukemia.' _citation.year 2017 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41467-017-01326-5 _citation.pdbx_database_id_PubMed 29062045 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Smith, M.J.' 1 ? primary 'Ottoni, E.' 2 ? primary 'Ishiyama, N.' 3 ? primary 'Goudreault, M.' 4 ? primary 'Haman, A.' 5 ? primary 'Meyer, C.' 6 ? primary 'Tucholska, M.' 7 ? primary 'Gasmi-Seabrook, G.' 8 ? primary 'Menezes, S.' 9 ? primary 'Laister, R.C.' 10 ? primary 'Minden, M.D.' 11 ? primary 'Marschalek, R.' 12 ? primary 'Gingras, A.C.' 13 ? primary 'Hoang, T.' 14 ? primary 'Ikura, M.' 15 ? # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 6AMB _cell.details ? _cell.formula_units_Z ? _cell.length_a 48.239 _cell.length_a_esd ? _cell.length_b 57.152 _cell.length_b_esd ? _cell.length_c 73.329 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6AMB _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'GTPase HRas' 19386.875 1 ? ? ? ? 2 polymer man Afadin 11529.033 1 ? ? ? ? 3 non-polymer syn 'PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER' 522.196 1 ? ? ? ? 4 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 5 water nat water 18.015 10 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 'H-Ras-1, Ha-Ras, Transforming protein p21, c-H-ras, p21ras' 2 'Afadin adherens junction formation factor, Protein Af-6' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;HMMTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGF LCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDLAARTVESRQAQDLARSYGIPYIETSAKTRQGVEDAFYT LVREIRQHKL ; ;HMMTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGF LCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDLAARTVESRQAQDLARSYGIPYIETSAKTRQGVEDAFYT LVREIRQHKL ; A ? 2 'polypeptide(L)' no no ;EFHGVMRFYFQDKAAGNFATKCIRVSSTATTQDVIETLAEKFRPDMRMLSSPKYSLYEVHVSGERRLDIDEKPLVVQLNW NKDDREGRFVLKNENDAIP ; ;EFHGVMRFYFQDKAAGNFATKCIRVSSTATTQDVIETLAEKFRPDMRMLSSPKYSLYEVHVSGERRLDIDEKPLVVQLNW NKDDREGRFVLKNENDAIP ; B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 HIS n 1 2 MET n 1 3 MET n 1 4 THR n 1 5 GLU n 1 6 TYR n 1 7 LYS n 1 8 LEU n 1 9 VAL n 1 10 VAL n 1 11 VAL n 1 12 GLY n 1 13 ALA n 1 14 GLY n 1 15 GLY n 1 16 VAL n 1 17 GLY n 1 18 LYS n 1 19 SER n 1 20 ALA n 1 21 LEU n 1 22 THR n 1 23 ILE n 1 24 GLN n 1 25 LEU n 1 26 ILE n 1 27 GLN n 1 28 ASN n 1 29 HIS n 1 30 PHE n 1 31 VAL n 1 32 ASP n 1 33 GLU n 1 34 TYR n 1 35 ASP n 1 36 PRO n 1 37 THR n 1 38 ILE n 1 39 GLU n 1 40 ASP n 1 41 SER n 1 42 TYR n 1 43 ARG n 1 44 LYS n 1 45 GLN n 1 46 VAL n 1 47 VAL n 1 48 ILE n 1 49 ASP n 1 50 GLY n 1 51 GLU n 1 52 THR n 1 53 CYS n 1 54 LEU n 1 55 LEU n 1 56 ASP n 1 57 ILE n 1 58 LEU n 1 59 ASP n 1 60 THR n 1 61 ALA n 1 62 GLY n 1 63 GLN n 1 64 GLU n 1 65 GLU n 1 66 TYR n 1 67 SER n 1 68 ALA n 1 69 MET n 1 70 ARG n 1 71 ASP n 1 72 GLN n 1 73 TYR n 1 74 MET n 1 75 ARG n 1 76 THR n 1 77 GLY n 1 78 GLU n 1 79 GLY n 1 80 PHE n 1 81 LEU n 1 82 CYS n 1 83 VAL n 1 84 PHE n 1 85 ALA n 1 86 ILE n 1 87 ASN n 1 88 ASN n 1 89 THR n 1 90 LYS n 1 91 SER n 1 92 PHE n 1 93 GLU n 1 94 ASP n 1 95 ILE n 1 96 HIS n 1 97 GLN n 1 98 TYR n 1 99 ARG n 1 100 GLU n 1 101 GLN n 1 102 ILE n 1 103 LYS n 1 104 ARG n 1 105 VAL n 1 106 LYS n 1 107 ASP n 1 108 SER n 1 109 ASP n 1 110 ASP n 1 111 VAL n 1 112 PRO n 1 113 MET n 1 114 VAL n 1 115 LEU n 1 116 VAL n 1 117 GLY n 1 118 ASN n 1 119 LYS n 1 120 CYS n 1 121 ASP n 1 122 LEU n 1 123 ALA n 1 124 ALA n 1 125 ARG n 1 126 THR n 1 127 VAL n 1 128 GLU n 1 129 SER n 1 130 ARG n 1 131 GLN n 1 132 ALA n 1 133 GLN n 1 134 ASP n 1 135 LEU n 1 136 ALA n 1 137 ARG n 1 138 SER n 1 139 TYR n 1 140 GLY n 1 141 ILE n 1 142 PRO n 1 143 TYR n 1 144 ILE n 1 145 GLU n 1 146 THR n 1 147 SER n 1 148 ALA n 1 149 LYS n 1 150 THR n 1 151 ARG n 1 152 GLN n 1 153 GLY n 1 154 VAL n 1 155 GLU n 1 156 ASP n 1 157 ALA n 1 158 PHE n 1 159 TYR n 1 160 THR n 1 161 LEU n 1 162 VAL n 1 163 ARG n 1 164 GLU n 1 165 ILE n 1 166 ARG n 1 167 GLN n 1 168 HIS n 1 169 LYS n 1 170 LEU n 2 1 GLU n 2 2 PHE n 2 3 HIS n 2 4 GLY n 2 5 VAL n 2 6 MET n 2 7 ARG n 2 8 PHE n 2 9 TYR n 2 10 PHE n 2 11 GLN n 2 12 ASP n 2 13 LYS n 2 14 ALA n 2 15 ALA n 2 16 GLY n 2 17 ASN n 2 18 PHE n 2 19 ALA n 2 20 THR n 2 21 LYS n 2 22 CYS n 2 23 ILE n 2 24 ARG n 2 25 VAL n 2 26 SER n 2 27 SER n 2 28 THR n 2 29 ALA n 2 30 THR n 2 31 THR n 2 32 GLN n 2 33 ASP n 2 34 VAL n 2 35 ILE n 2 36 GLU n 2 37 THR n 2 38 LEU n 2 39 ALA n 2 40 GLU n 2 41 LYS n 2 42 PHE n 2 43 ARG n 2 44 PRO n 2 45 ASP n 2 46 MET n 2 47 ARG n 2 48 MET n 2 49 LEU n 2 50 SER n 2 51 SER n 2 52 PRO n 2 53 LYS n 2 54 TYR n 2 55 SER n 2 56 LEU n 2 57 TYR n 2 58 GLU n 2 59 VAL n 2 60 HIS n 2 61 VAL n 2 62 SER n 2 63 GLY n 2 64 GLU n 2 65 ARG n 2 66 ARG n 2 67 LEU n 2 68 ASP n 2 69 ILE n 2 70 ASP n 2 71 GLU n 2 72 LYS n 2 73 PRO n 2 74 LEU n 2 75 VAL n 2 76 VAL n 2 77 GLN n 2 78 LEU n 2 79 ASN n 2 80 TRP n 2 81 ASN n 2 82 LYS n 2 83 ASP n 2 84 ASP n 2 85 ARG n 2 86 GLU n 2 87 GLY n 2 88 ARG n 2 89 PHE n 2 90 VAL n 2 91 LEU n 2 92 LYS n 2 93 ASN n 2 94 GLU n 2 95 ASN n 2 96 ASP n 2 97 ALA n 2 98 ILE n 2 99 PRO n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample 'Biological sequence' 1 170 Human ? 'HRAS, HRAS1' ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli BL21' 511693 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample 'Biological sequence' 1 99 Mouse ? 'Afdn, Af6, Mllt4' ? ? ? ? ? ? 'Mus musculus' 10090 ? ? ? ? ? ? ? ? 'Escherichia coli BL21' 511693 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP RASH_HUMAN P01112 ? 1 ;MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLC VFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDLAARTVESRQAQDLARSYGIPYIETSAKTRQGVEDAFYTLV REIRQHKL ; 1 2 UNP AFAD_MOUSE Q9QZQ1 ? 2 ;EFHGVMRFYFQDKAAGNFATKCIRVSSTATTQDVIETLAEKFRPDMRMLSSPKYSLYEVHVSGERRLDIDEKPLVVQLNW NKDDREGRFVLKNENDAIP ; 38 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 6AMB A 3 ? 170 ? P01112 1 ? 168 ? 1 168 2 2 6AMB B 1 ? 99 ? Q9QZQ1 38 ? 136 ? 38 136 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 6AMB HIS A 1 ? UNP P01112 ? ? 'expression tag' -1 1 1 6AMB MET A 2 ? UNP P01112 ? ? 'expression tag' 0 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GNP non-polymer . 'PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER' ? 'C10 H17 N6 O13 P3' 522.196 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6AMB _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 1.63 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 24.76 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 8.9 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 297 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details 'PEG3350, K2HPO4' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2013-06-28 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97929 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 19-ID' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.97929 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 19-ID _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 6AMB _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.500 _reflns.d_resolution_low 50.000 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 7437 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.900 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 6.900 _reflns.pdbx_Rmerge_I_obs 0.097 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 8.600 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared 0.993 _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.106 _reflns.pdbx_Rpim_I_all 0.041 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_R_split 2.500 2.540 ? ? ? ? ? ? 358 100.000 ? ? ? ? 0.557 ? ? ? ? ? ? ? ? 6.200 ? 0.756 ? ? 0.609 0.241 ? 1 1 0.853 ? 2.540 2.590 ? ? ? ? ? ? 366 99.700 ? ? ? ? 0.556 ? ? ? ? ? ? ? ? 6.900 ? 0.829 ? ? 0.602 0.228 ? 2 1 0.901 ? 2.590 2.640 ? ? ? ? ? ? 348 100.000 ? ? ? ? 0.479 ? ? ? ? ? ? ? ? 7.100 ? 0.819 ? ? 0.517 0.193 ? 3 1 0.930 ? 2.640 2.690 ? ? ? ? ? ? 381 100.000 ? ? ? ? 0.442 ? ? ? ? ? ? ? ? 7.100 ? 0.889 ? ? 0.476 0.176 ? 4 1 0.917 ? 2.690 2.750 ? ? ? ? ? ? 362 100.000 ? ? ? ? 0.458 ? ? ? ? ? ? ? ? 7.100 ? 0.894 ? ? 0.495 0.185 ? 5 1 0.915 ? 2.750 2.820 ? ? ? ? ? ? 368 100.000 ? ? ? ? 0.355 ? ? ? ? ? ? ? ? 7.100 ? 0.900 ? ? 0.383 0.143 ? 6 1 0.927 ? 2.820 2.890 ? ? ? ? ? ? 359 100.000 ? ? ? ? 0.286 ? ? ? ? ? ? ? ? 7.100 ? 1.011 ? ? 0.308 0.115 ? 7 1 0.951 ? 2.890 2.960 ? ? ? ? ? ? 358 100.000 ? ? ? ? 0.252 ? ? ? ? ? ? ? ? 7.100 ? 1.074 ? ? 0.272 0.102 ? 8 1 0.960 ? 2.960 3.050 ? ? ? ? ? ? 367 100.000 ? ? ? ? 0.208 ? ? ? ? ? ? ? ? 7.000 ? 1.035 ? ? 0.225 0.084 ? 9 1 0.986 ? 3.050 3.150 ? ? ? ? ? ? 363 100.000 ? ? ? ? 0.163 ? ? ? ? ? ? ? ? 7.000 ? 1.109 ? ? 0.177 0.066 ? 10 1 0.988 ? 3.150 3.260 ? ? ? ? ? ? 370 100.000 ? ? ? ? 0.148 ? ? ? ? ? ? ? ? 7.000 ? 1.057 ? ? 0.160 0.060 ? 11 1 0.989 ? 3.260 3.390 ? ? ? ? ? ? 368 100.000 ? ? ? ? 0.135 ? ? ? ? ? ? ? ? 7.000 ? 1.147 ? ? 0.146 0.055 ? 12 1 0.989 ? 3.390 3.550 ? ? ? ? ? ? 367 100.000 ? ? ? ? 0.115 ? ? ? ? ? ? ? ? 7.000 ? 1.200 ? ? 0.124 0.047 ? 13 1 0.991 ? 3.550 3.730 ? ? ? ? ? ? 374 100.000 ? ? ? ? 0.100 ? ? ? ? ? ? ? ? 7.000 ? 1.099 ? ? 0.108 0.041 ? 14 1 0.994 ? 3.730 3.970 ? ? ? ? ? ? 366 100.000 ? ? ? ? 0.083 ? ? ? ? ? ? ? ? 6.900 ? 1.078 ? ? 0.090 0.034 ? 15 1 0.995 ? 3.970 4.270 ? ? ? ? ? ? 373 100.000 ? ? ? ? 0.076 ? ? ? ? ? ? ? ? 6.900 ? 0.993 ? ? 0.082 0.031 ? 16 1 0.996 ? 4.270 4.700 ? ? ? ? ? ? 385 100.000 ? ? ? ? 0.067 ? ? ? ? ? ? ? ? 6.800 ? 0.963 ? ? 0.073 0.028 ? 17 1 0.997 ? 4.700 5.380 ? ? ? ? ? ? 387 100.000 ? ? ? ? 0.067 ? ? ? ? ? ? ? ? 6.600 ? 0.974 ? ? 0.073 0.028 ? 18 1 0.997 ? 5.380 6.780 ? ? ? ? ? ? 390 100.000 ? ? ? ? 0.068 ? ? ? ? ? ? ? ? 6.400 ? 0.961 ? ? 0.074 0.029 ? 19 1 0.996 ? 6.780 50.000 ? ? ? ? ? ? 427 98.800 ? ? ? ? 0.069 ? ? ? ? ? ? ? ? 5.900 ? 1.027 ? ? 0.076 0.031 ? 20 1 0.996 ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max 110.910 _refine.B_iso_mean 54.2805 _refine.B_iso_min 27.180 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6AMB _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.5 _refine.ls_d_res_low 40.3010 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 7226 _refine.ls_number_reflns_R_free 725 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 97.4200 _refine.ls_percent_reflns_R_free 10.0300 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2232 _refine.ls_R_factor_R_free 0.2655 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2184 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 'PDB entry 3DDC' _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 28.5100 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.3100 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.cycle_id final _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.d_res_high 2.5 _refine_hist.d_res_low 40.3010 _refine_hist.pdbx_number_atoms_ligand 33 _refine_hist.number_atoms_solvent 10 _refine_hist.number_atoms_total 2010 _refine_hist.pdbx_number_residues_total 249 _refine_hist.pdbx_B_iso_mean_ligand 38.51 _refine_hist.pdbx_B_iso_mean_solvent 45.20 _refine_hist.pdbx_number_atoms_protein 1967 _refine_hist.pdbx_number_atoms_nucleic_acid 0 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.002 ? 2037 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.522 ? 2758 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.041 ? 311 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.003 ? 351 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 17.441 ? 1223 ? f_dihedral_angle_d ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.4991 2.6920 1334 . 134 1200 93.0000 . . . 0.3338 0.0000 0.2383 . . . . . . 5 . . . 'X-RAY DIFFRACTION' 2.6920 2.9629 1397 . 142 1255 96.0000 . . . 0.4071 0.0000 0.2574 . . . . . . 5 . . . 'X-RAY DIFFRACTION' 2.9629 3.3914 1452 . 145 1307 99.0000 . . . 0.2697 0.0000 0.2323 . . . . . . 5 . . . 'X-RAY DIFFRACTION' 3.3914 4.2721 1474 . 147 1327 100.0000 . . . 0.2606 0.0000 0.2095 . . . . . . 5 . . . 'X-RAY DIFFRACTION' 4.2721 40.3059 1569 . 157 1412 100.0000 . . . 0.2247 0.0000 0.2070 . . . . . . 5 . . . # _struct.entry_id 6AMB _struct.title 'Crystal Structure of the Afadin RA1 domain in complex with HRAS' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6AMB _struct_keywords.text 'GTPase, adhesion, RA domain, RBD domain, SIGNALING PROTEIN' _struct_keywords.pdbx_keywords 'SIGNALING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 GLY A 17 ? ASN A 28 ? GLY A 15 ASN A 26 1 ? 12 HELX_P HELX_P2 AA2 GLN A 63 ? SER A 67 ? GLN A 61 SER A 65 5 ? 5 HELX_P HELX_P3 AA3 MET A 69 ? GLY A 77 ? MET A 67 GLY A 75 1 ? 9 HELX_P HELX_P4 AA4 ASN A 88 ? ASP A 107 ? ASN A 86 ASP A 105 1 ? 20 HELX_P HELX_P5 AA5 GLU A 128 ? GLY A 140 ? GLU A 126 GLY A 138 1 ? 13 HELX_P HELX_P6 AA6 GLY A 153 ? GLN A 167 ? GLY A 151 GLN A 165 1 ? 15 HELX_P HELX_P7 AA7 THR B 30 ? ARG B 43 ? THR B 67 ARG B 80 1 ? 14 HELX_P HELX_P8 AA8 LYS B 72 ? LEU B 78 ? LYS B 109 LEU B 115 1 ? 7 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A SER 19 OG ? ? ? 1_555 D MG . MG ? ? A SER 17 A MG 202 1_555 ? ? ? ? ? ? ? 2.255 ? ? metalc2 metalc ? ? A THR 37 OG1 ? ? ? 1_555 D MG . MG ? ? A THR 35 A MG 202 1_555 ? ? ? ? ? ? ? 2.238 ? ? metalc3 metalc ? ? C GNP . O3G ? ? ? 1_555 D MG . MG ? ? A GNP 201 A MG 202 1_555 ? ? ? ? ? ? ? 2.113 ? ? metalc4 metalc ? ? C GNP . O2B ? ? ? 1_555 D MG . MG ? ? A GNP 201 A MG 202 1_555 ? ? ? ? ? ? ? 2.120 ? ? metalc5 metalc ? ? D MG . MG ? ? ? 1_555 E HOH . O ? ? A MG 202 A HOH 302 1_555 ? ? ? ? ? ? ? 2.417 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 11 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? parallel AA1 2 3 ? parallel AA1 3 4 ? parallel AA1 4 5 ? parallel AA1 5 6 ? anti-parallel AA1 6 7 ? anti-parallel AA1 7 8 ? anti-parallel AA1 8 9 ? parallel AA1 9 10 ? anti-parallel AA1 10 11 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 TYR A 143 ? GLU A 145 ? TYR A 141 GLU A 143 AA1 2 MET A 113 ? ASN A 118 ? MET A 111 ASN A 116 AA1 3 GLY A 79 ? ALA A 85 ? GLY A 77 ALA A 83 AA1 4 THR A 4 ? GLY A 12 ? THR A 2 GLY A 10 AA1 5 THR A 52 ? THR A 60 ? THR A 50 THR A 58 AA1 6 GLU A 39 ? VAL A 47 ? GLU A 37 VAL A 45 AA1 7 THR B 20 ? SER B 26 ? THR B 57 SER B 63 AA1 8 HIS B 3 ? TYR B 9 ? HIS B 40 TYR B 46 AA1 9 ARG B 88 ? ASN B 93 ? ARG B 125 ASN B 130 AA1 10 TYR B 54 ? HIS B 60 ? TYR B 91 HIS B 97 AA1 11 GLY B 63 ? ARG B 66 ? GLY B 100 ARG B 103 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O ILE A 144 ? O ILE A 142 N LEU A 115 ? N LEU A 113 AA1 2 3 O ASN A 118 ? O ASN A 116 N PHE A 84 ? N PHE A 82 AA1 3 4 O LEU A 81 ? O LEU A 79 N VAL A 11 ? N VAL A 9 AA1 4 5 N THR A 4 ? N THR A 2 O LEU A 54 ? O LEU A 52 AA1 5 6 O CYS A 53 ? O CYS A 51 N VAL A 46 ? N VAL A 44 AA1 6 7 N SER A 41 ? N SER A 39 O THR B 20 ? O THR B 57 AA1 7 8 O VAL B 25 ? O VAL B 62 N GLY B 4 ? N GLY B 41 AA1 8 9 N TYR B 9 ? N TYR B 46 O LEU B 91 ? O LEU B 128 AA1 9 10 O VAL B 90 ? O VAL B 127 N TYR B 57 ? N TYR B 94 AA1 10 11 N HIS B 60 ? N HIS B 97 O GLY B 63 ? O GLY B 100 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A GNP 201 ? 25 'binding site for residue GNP A 201' AC2 Software A MG 202 ? 5 'binding site for residue MG A 202' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 25 ALA A 13 ? ALA A 11 . ? 1_555 ? 2 AC1 25 GLY A 14 ? GLY A 12 . ? 1_555 ? 3 AC1 25 GLY A 15 ? GLY A 13 . ? 1_555 ? 4 AC1 25 VAL A 16 ? VAL A 14 . ? 1_555 ? 5 AC1 25 GLY A 17 ? GLY A 15 . ? 1_555 ? 6 AC1 25 LYS A 18 ? LYS A 16 . ? 1_555 ? 7 AC1 25 SER A 19 ? SER A 17 . ? 1_555 ? 8 AC1 25 ALA A 20 ? ALA A 18 . ? 1_555 ? 9 AC1 25 PHE A 30 ? PHE A 28 . ? 1_555 ? 10 AC1 25 VAL A 31 ? VAL A 29 . ? 1_555 ? 11 AC1 25 ASP A 32 ? ASP A 30 . ? 1_555 ? 12 AC1 25 TYR A 34 ? TYR A 32 . ? 1_555 ? 13 AC1 25 PRO A 36 ? PRO A 34 . ? 1_555 ? 14 AC1 25 THR A 37 ? THR A 35 . ? 1_555 ? 15 AC1 25 GLY A 62 ? GLY A 60 . ? 1_555 ? 16 AC1 25 GLN A 63 ? GLN A 61 . ? 1_555 ? 17 AC1 25 ASN A 118 ? ASN A 116 . ? 1_555 ? 18 AC1 25 LYS A 119 ? LYS A 117 . ? 1_555 ? 19 AC1 25 ASP A 121 ? ASP A 119 . ? 1_555 ? 20 AC1 25 SER A 147 ? SER A 145 . ? 1_555 ? 21 AC1 25 ALA A 148 ? ALA A 146 . ? 1_555 ? 22 AC1 25 LYS A 149 ? LYS A 147 . ? 1_555 ? 23 AC1 25 MG D . ? MG A 202 . ? 1_555 ? 24 AC1 25 HOH E . ? HOH A 302 . ? 1_555 ? 25 AC1 25 HOH E . ? HOH A 306 . ? 1_555 ? 26 AC2 5 SER A 19 ? SER A 17 . ? 1_555 ? 27 AC2 5 ASP A 35 ? ASP A 33 . ? 1_555 ? 28 AC2 5 THR A 37 ? THR A 35 . ? 1_555 ? 29 AC2 5 GNP C . ? GNP A 201 . ? 1_555 ? 30 AC2 5 HOH E . ? HOH A 302 . ? 1_555 ? # _atom_sites.entry_id 6AMB _atom_sites.fract_transf_matrix[1][1] 0.020730 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017497 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.013637 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C MG N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 HIS 1 -1 -1 HIS HIS A . n A 1 2 MET 2 0 0 MET MET A . n A 1 3 MET 3 1 1 MET MET A . n A 1 4 THR 4 2 2 THR THR A . n A 1 5 GLU 5 3 3 GLU GLU A . n A 1 6 TYR 6 4 4 TYR TYR A . n A 1 7 LYS 7 5 5 LYS LYS A . n A 1 8 LEU 8 6 6 LEU LEU A . n A 1 9 VAL 9 7 7 VAL VAL A . n A 1 10 VAL 10 8 8 VAL VAL A . n A 1 11 VAL 11 9 9 VAL VAL A . n A 1 12 GLY 12 10 10 GLY GLY A . n A 1 13 ALA 13 11 11 ALA ALA A . n A 1 14 GLY 14 12 12 GLY GLY A . n A 1 15 GLY 15 13 13 GLY GLY A . n A 1 16 VAL 16 14 14 VAL VAL A . n A 1 17 GLY 17 15 15 GLY GLY A . n A 1 18 LYS 18 16 16 LYS LYS A . n A 1 19 SER 19 17 17 SER SER A . n A 1 20 ALA 20 18 18 ALA ALA A . n A 1 21 LEU 21 19 19 LEU LEU A . n A 1 22 THR 22 20 20 THR THR A . n A 1 23 ILE 23 21 21 ILE ILE A . n A 1 24 GLN 24 22 22 GLN GLN A . n A 1 25 LEU 25 23 23 LEU LEU A . n A 1 26 ILE 26 24 24 ILE ILE A . n A 1 27 GLN 27 25 25 GLN GLN A . n A 1 28 ASN 28 26 26 ASN ASN A . n A 1 29 HIS 29 27 27 HIS HIS A . n A 1 30 PHE 30 28 28 PHE PHE A . n A 1 31 VAL 31 29 29 VAL VAL A . n A 1 32 ASP 32 30 30 ASP ASP A . n A 1 33 GLU 33 31 31 GLU GLU A . n A 1 34 TYR 34 32 32 TYR TYR A . n A 1 35 ASP 35 33 33 ASP ASP A . n A 1 36 PRO 36 34 34 PRO PRO A . n A 1 37 THR 37 35 35 THR THR A . n A 1 38 ILE 38 36 36 ILE ILE A . n A 1 39 GLU 39 37 37 GLU GLU A . n A 1 40 ASP 40 38 38 ASP ASP A . n A 1 41 SER 41 39 39 SER SER A . n A 1 42 TYR 42 40 40 TYR TYR A . n A 1 43 ARG 43 41 41 ARG ARG A . n A 1 44 LYS 44 42 42 LYS LYS A . n A 1 45 GLN 45 43 43 GLN GLN A . n A 1 46 VAL 46 44 44 VAL VAL A . n A 1 47 VAL 47 45 45 VAL VAL A . n A 1 48 ILE 48 46 46 ILE ILE A . n A 1 49 ASP 49 47 47 ASP ASP A . n A 1 50 GLY 50 48 48 GLY GLY A . n A 1 51 GLU 51 49 49 GLU GLU A . n A 1 52 THR 52 50 50 THR THR A . n A 1 53 CYS 53 51 51 CYS CYS A . n A 1 54 LEU 54 52 52 LEU LEU A . n A 1 55 LEU 55 53 53 LEU LEU A . n A 1 56 ASP 56 54 54 ASP ASP A . n A 1 57 ILE 57 55 55 ILE ILE A . n A 1 58 LEU 58 56 56 LEU LEU A . n A 1 59 ASP 59 57 57 ASP ASP A . n A 1 60 THR 60 58 58 THR THR A . n A 1 61 ALA 61 59 59 ALA ALA A . n A 1 62 GLY 62 60 60 GLY GLY A . n A 1 63 GLN 63 61 61 GLN GLN A . n A 1 64 GLU 64 62 62 GLU GLU A . n A 1 65 GLU 65 63 63 GLU GLU A . n A 1 66 TYR 66 64 64 TYR TYR A . n A 1 67 SER 67 65 65 SER SER A . n A 1 68 ALA 68 66 66 ALA ALA A . n A 1 69 MET 69 67 67 MET MET A . n A 1 70 ARG 70 68 68 ARG ARG A . n A 1 71 ASP 71 69 69 ASP ASP A . n A 1 72 GLN 72 70 70 GLN GLN A . n A 1 73 TYR 73 71 71 TYR TYR A . n A 1 74 MET 74 72 72 MET MET A . n A 1 75 ARG 75 73 73 ARG ARG A . n A 1 76 THR 76 74 74 THR THR A . n A 1 77 GLY 77 75 75 GLY GLY A . n A 1 78 GLU 78 76 76 GLU GLU A . n A 1 79 GLY 79 77 77 GLY GLY A . n A 1 80 PHE 80 78 78 PHE PHE A . n A 1 81 LEU 81 79 79 LEU LEU A . n A 1 82 CYS 82 80 80 CYS CYS A . n A 1 83 VAL 83 81 81 VAL VAL A . n A 1 84 PHE 84 82 82 PHE PHE A . n A 1 85 ALA 85 83 83 ALA ALA A . n A 1 86 ILE 86 84 84 ILE ILE A . n A 1 87 ASN 87 85 85 ASN ASN A . n A 1 88 ASN 88 86 86 ASN ASN A . n A 1 89 THR 89 87 87 THR THR A . n A 1 90 LYS 90 88 88 LYS LYS A . n A 1 91 SER 91 89 89 SER SER A . n A 1 92 PHE 92 90 90 PHE PHE A . n A 1 93 GLU 93 91 91 GLU GLU A . n A 1 94 ASP 94 92 92 ASP ASP A . n A 1 95 ILE 95 93 93 ILE ILE A . n A 1 96 HIS 96 94 94 HIS HIS A . n A 1 97 GLN 97 95 95 GLN GLN A . n A 1 98 TYR 98 96 96 TYR TYR A . n A 1 99 ARG 99 97 97 ARG ARG A . n A 1 100 GLU 100 98 98 GLU GLU A . n A 1 101 GLN 101 99 99 GLN GLN A . n A 1 102 ILE 102 100 100 ILE ILE A . n A 1 103 LYS 103 101 101 LYS LYS A . n A 1 104 ARG 104 102 102 ARG ARG A . n A 1 105 VAL 105 103 103 VAL VAL A . n A 1 106 LYS 106 104 104 LYS LYS A . n A 1 107 ASP 107 105 105 ASP ASP A . n A 1 108 SER 108 106 106 SER SER A . n A 1 109 ASP 109 107 107 ASP ASP A . n A 1 110 ASP 110 108 108 ASP ASP A . n A 1 111 VAL 111 109 109 VAL VAL A . n A 1 112 PRO 112 110 110 PRO PRO A . n A 1 113 MET 113 111 111 MET MET A . n A 1 114 VAL 114 112 112 VAL VAL A . n A 1 115 LEU 115 113 113 LEU LEU A . n A 1 116 VAL 116 114 114 VAL VAL A . n A 1 117 GLY 117 115 115 GLY GLY A . n A 1 118 ASN 118 116 116 ASN ASN A . n A 1 119 LYS 119 117 117 LYS LYS A . n A 1 120 CYS 120 118 118 CYS CYS A . n A 1 121 ASP 121 119 119 ASP ASP A . n A 1 122 LEU 122 120 120 LEU LEU A . n A 1 123 ALA 123 121 121 ALA ALA A . n A 1 124 ALA 124 122 122 ALA ALA A . n A 1 125 ARG 125 123 123 ARG ARG A . n A 1 126 THR 126 124 124 THR THR A . n A 1 127 VAL 127 125 125 VAL VAL A . n A 1 128 GLU 128 126 126 GLU GLU A . n A 1 129 SER 129 127 127 SER SER A . n A 1 130 ARG 130 128 128 ARG ARG A . n A 1 131 GLN 131 129 129 GLN GLN A . n A 1 132 ALA 132 130 130 ALA ALA A . n A 1 133 GLN 133 131 131 GLN GLN A . n A 1 134 ASP 134 132 132 ASP ASP A . n A 1 135 LEU 135 133 133 LEU LEU A . n A 1 136 ALA 136 134 134 ALA ALA A . n A 1 137 ARG 137 135 135 ARG ARG A . n A 1 138 SER 138 136 136 SER SER A . n A 1 139 TYR 139 137 137 TYR TYR A . n A 1 140 GLY 140 138 138 GLY GLY A . n A 1 141 ILE 141 139 139 ILE ILE A . n A 1 142 PRO 142 140 140 PRO PRO A . n A 1 143 TYR 143 141 141 TYR TYR A . n A 1 144 ILE 144 142 142 ILE ILE A . n A 1 145 GLU 145 143 143 GLU GLU A . n A 1 146 THR 146 144 144 THR THR A . n A 1 147 SER 147 145 145 SER SER A . n A 1 148 ALA 148 146 146 ALA ALA A . n A 1 149 LYS 149 147 147 LYS LYS A . n A 1 150 THR 150 148 148 THR THR A . n A 1 151 ARG 151 149 149 ARG ARG A . n A 1 152 GLN 152 150 150 GLN GLN A . n A 1 153 GLY 153 151 151 GLY GLY A . n A 1 154 VAL 154 152 152 VAL VAL A . n A 1 155 GLU 155 153 153 GLU GLU A . n A 1 156 ASP 156 154 154 ASP ASP A . n A 1 157 ALA 157 155 155 ALA ALA A . n A 1 158 PHE 158 156 156 PHE PHE A . n A 1 159 TYR 159 157 157 TYR TYR A . n A 1 160 THR 160 158 158 THR THR A . n A 1 161 LEU 161 159 159 LEU LEU A . n A 1 162 VAL 162 160 160 VAL VAL A . n A 1 163 ARG 163 161 161 ARG ARG A . n A 1 164 GLU 164 162 162 GLU GLU A . n A 1 165 ILE 165 163 163 ILE ILE A . n A 1 166 ARG 166 164 164 ARG ARG A . n A 1 167 GLN 167 165 165 GLN GLN A . n A 1 168 HIS 168 166 166 HIS HIS A . n A 1 169 LYS 169 167 167 LYS LYS A . n A 1 170 LEU 170 168 168 LEU LEU A . n B 2 1 GLU 1 38 38 GLU GLU B . n B 2 2 PHE 2 39 39 PHE PHE B . n B 2 3 HIS 3 40 40 HIS HIS B . n B 2 4 GLY 4 41 41 GLY GLY B . n B 2 5 VAL 5 42 42 VAL VAL B . n B 2 6 MET 6 43 43 MET MET B . n B 2 7 ARG 7 44 44 ARG ARG B . n B 2 8 PHE 8 45 45 PHE PHE B . n B 2 9 TYR 9 46 46 TYR TYR B . n B 2 10 PHE 10 47 47 PHE PHE B . n B 2 11 GLN 11 48 48 GLN GLN B . n B 2 12 ASP 12 49 ? ? ? B . n B 2 13 LYS 13 50 ? ? ? B . n B 2 14 ALA 14 51 ? ? ? B . n B 2 15 ALA 15 52 ? ? ? B . n B 2 16 GLY 16 53 ? ? ? B . n B 2 17 ASN 17 54 ? ? ? B . n B 2 18 PHE 18 55 ? ? ? B . n B 2 19 ALA 19 56 56 ALA ALA B . n B 2 20 THR 20 57 57 THR THR B . n B 2 21 LYS 21 58 58 LYS LYS B . n B 2 22 CYS 22 59 59 CYS CYS B . n B 2 23 ILE 23 60 60 ILE ILE B . n B 2 24 ARG 24 61 61 ARG ARG B . n B 2 25 VAL 25 62 62 VAL VAL B . n B 2 26 SER 26 63 63 SER SER B . n B 2 27 SER 27 64 64 SER SER B . n B 2 28 THR 28 65 65 THR THR B . n B 2 29 ALA 29 66 66 ALA ALA B . n B 2 30 THR 30 67 67 THR THR B . n B 2 31 THR 31 68 68 THR THR B . n B 2 32 GLN 32 69 69 GLN GLN B . n B 2 33 ASP 33 70 70 ASP ASP B . n B 2 34 VAL 34 71 71 VAL VAL B . n B 2 35 ILE 35 72 72 ILE ILE B . n B 2 36 GLU 36 73 73 GLU GLU B . n B 2 37 THR 37 74 74 THR THR B . n B 2 38 LEU 38 75 75 LEU LEU B . n B 2 39 ALA 39 76 76 ALA ALA B . n B 2 40 GLU 40 77 77 GLU GLU B . n B 2 41 LYS 41 78 78 LYS LYS B . n B 2 42 PHE 42 79 79 PHE PHE B . n B 2 43 ARG 43 80 80 ARG ARG B . n B 2 44 PRO 44 81 81 PRO PRO B . n B 2 45 ASP 45 82 82 ASP ASP B . n B 2 46 MET 46 83 83 MET MET B . n B 2 47 ARG 47 84 ? ? ? B . n B 2 48 MET 48 85 ? ? ? B . n B 2 49 LEU 49 86 ? ? ? B . n B 2 50 SER 50 87 ? ? ? B . n B 2 51 SER 51 88 ? ? ? B . n B 2 52 PRO 52 89 ? ? ? B . n B 2 53 LYS 53 90 90 LYS LYS B . n B 2 54 TYR 54 91 91 TYR TYR B . n B 2 55 SER 55 92 92 SER SER B . n B 2 56 LEU 56 93 93 LEU LEU B . n B 2 57 TYR 57 94 94 TYR TYR B . n B 2 58 GLU 58 95 95 GLU GLU B . n B 2 59 VAL 59 96 96 VAL VAL B . n B 2 60 HIS 60 97 97 HIS HIS B . n B 2 61 VAL 61 98 98 VAL VAL B . n B 2 62 SER 62 99 99 SER SER B . n B 2 63 GLY 63 100 100 GLY GLY B . n B 2 64 GLU 64 101 101 GLU GLU B . n B 2 65 ARG 65 102 102 ARG ARG B . n B 2 66 ARG 66 103 103 ARG ARG B . n B 2 67 LEU 67 104 104 LEU LEU B . n B 2 68 ASP 68 105 105 ASP ASP B . n B 2 69 ILE 69 106 106 ILE ILE B . n B 2 70 ASP 70 107 107 ASP ASP B . n B 2 71 GLU 71 108 108 GLU GLU B . n B 2 72 LYS 72 109 109 LYS LYS B . n B 2 73 PRO 73 110 110 PRO PRO B . n B 2 74 LEU 74 111 111 LEU LEU B . n B 2 75 VAL 75 112 112 VAL VAL B . n B 2 76 VAL 76 113 113 VAL VAL B . n B 2 77 GLN 77 114 114 GLN GLN B . n B 2 78 LEU 78 115 115 LEU LEU B . n B 2 79 ASN 79 116 116 ASN ASN B . n B 2 80 TRP 80 117 117 TRP TRP B . n B 2 81 ASN 81 118 ? ? ? B . n B 2 82 LYS 82 119 ? ? ? B . n B 2 83 ASP 83 120 ? ? ? B . n B 2 84 ASP 84 121 121 ASP ASP B . n B 2 85 ARG 85 122 122 ARG ARG B . n B 2 86 GLU 86 123 123 GLU GLU B . n B 2 87 GLY 87 124 124 GLY GLY B . n B 2 88 ARG 88 125 125 ARG ARG B . n B 2 89 PHE 89 126 126 PHE PHE B . n B 2 90 VAL 90 127 127 VAL VAL B . n B 2 91 LEU 91 128 128 LEU LEU B . n B 2 92 LYS 92 129 129 LYS LYS B . n B 2 93 ASN 93 130 130 ASN ASN B . n B 2 94 GLU 94 131 131 GLU GLU B . n B 2 95 ASN 95 132 132 ASN ASN B . n B 2 96 ASP 96 133 ? ? ? B . n B 2 97 ALA 97 134 ? ? ? B . n B 2 98 ILE 98 135 ? ? ? B . n B 2 99 PRO 99 136 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 GNP 1 201 1 GNP GNP A . D 4 MG 1 202 2 MG MG A . E 5 HOH 1 301 7 HOH HOH A . E 5 HOH 2 302 1 HOH HOH A . E 5 HOH 3 303 4 HOH HOH A . E 5 HOH 4 304 5 HOH HOH A . E 5 HOH 5 305 2 HOH HOH A . E 5 HOH 6 306 10 HOH HOH A . E 5 HOH 7 307 8 HOH HOH A . E 5 HOH 8 308 9 HOH HOH A . F 5 HOH 1 201 3 HOH HOH B . F 5 HOH 2 202 6 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1750 ? 1 MORE -14 ? 1 'SSA (A^2)' 12970 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OG ? A SER 19 ? A SER 17 ? 1_555 MG ? D MG . ? A MG 202 ? 1_555 OG1 ? A THR 37 ? A THR 35 ? 1_555 70.6 ? 2 OG ? A SER 19 ? A SER 17 ? 1_555 MG ? D MG . ? A MG 202 ? 1_555 O3G ? C GNP . ? A GNP 201 ? 1_555 123.8 ? 3 OG1 ? A THR 37 ? A THR 35 ? 1_555 MG ? D MG . ? A MG 202 ? 1_555 O3G ? C GNP . ? A GNP 201 ? 1_555 81.4 ? 4 OG ? A SER 19 ? A SER 17 ? 1_555 MG ? D MG . ? A MG 202 ? 1_555 O2B ? C GNP . ? A GNP 201 ? 1_555 76.9 ? 5 OG1 ? A THR 37 ? A THR 35 ? 1_555 MG ? D MG . ? A MG 202 ? 1_555 O2B ? C GNP . ? A GNP 201 ? 1_555 126.8 ? 6 O3G ? C GNP . ? A GNP 201 ? 1_555 MG ? D MG . ? A MG 202 ? 1_555 O2B ? C GNP . ? A GNP 201 ? 1_555 83.2 ? 7 OG ? A SER 19 ? A SER 17 ? 1_555 MG ? D MG . ? A MG 202 ? 1_555 O ? E HOH . ? A HOH 302 ? 1_555 57.5 ? 8 OG1 ? A THR 37 ? A THR 35 ? 1_555 MG ? D MG . ? A MG 202 ? 1_555 O ? E HOH . ? A HOH 302 ? 1_555 64.1 ? 9 O3G ? C GNP . ? A GNP 201 ? 1_555 MG ? D MG . ? A MG 202 ? 1_555 O ? E HOH . ? A HOH 302 ? 1_555 66.6 ? 10 O2B ? C GNP . ? A GNP 201 ? 1_555 MG ? D MG . ? A MG 202 ? 1_555 O ? E HOH . ? A HOH 302 ? 1_555 62.9 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2017-11-01 2 'Structure model' 1 1 2017-11-08 3 'Structure model' 1 2 2023-10-04 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' chem_comp_atom 4 3 'Structure model' chem_comp_bond 5 3 'Structure model' database_2 6 3 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' 4 2 'Structure model' '_citation.pdbx_database_id_PubMed' 5 2 'Structure model' '_citation.title' 6 2 'Structure model' '_citation_author.name' 7 3 'Structure model' '_database_2.pdbx_DOI' 8 3 'Structure model' '_database_2.pdbx_database_accession' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 1 ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.10.1_2155 2 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.22 3 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 5 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ILE A 36 ? ? -102.29 -70.45 2 1 SER A 65 ? ? -118.16 72.92 3 1 ASP A 108 ? ? -105.79 75.53 4 1 GLU B 123 ? ? -84.11 49.02 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLU 63 ? CG ? A GLU 65 CG 2 1 Y 1 A GLU 63 ? CD ? A GLU 65 CD 3 1 Y 1 A GLU 63 ? OE1 ? A GLU 65 OE1 4 1 Y 1 A GLU 63 ? OE2 ? A GLU 65 OE2 5 1 Y 1 B GLN 48 ? CG ? B GLN 11 CG 6 1 Y 1 B GLN 48 ? CD ? B GLN 11 CD 7 1 Y 1 B GLN 48 ? OE1 ? B GLN 11 OE1 8 1 Y 1 B GLN 48 ? NE2 ? B GLN 11 NE2 9 1 Y 1 B LYS 78 ? CG ? B LYS 41 CG 10 1 Y 1 B LYS 78 ? CD ? B LYS 41 CD 11 1 Y 1 B LYS 78 ? CE ? B LYS 41 CE 12 1 Y 1 B LYS 78 ? NZ ? B LYS 41 NZ 13 1 Y 1 B PHE 79 ? CG ? B PHE 42 CG 14 1 Y 1 B PHE 79 ? CD1 ? B PHE 42 CD1 15 1 Y 1 B PHE 79 ? CD2 ? B PHE 42 CD2 16 1 Y 1 B PHE 79 ? CE1 ? B PHE 42 CE1 17 1 Y 1 B PHE 79 ? CE2 ? B PHE 42 CE2 18 1 Y 1 B PHE 79 ? CZ ? B PHE 42 CZ 19 1 Y 1 B ARG 80 ? CG ? B ARG 43 CG 20 1 Y 1 B ARG 80 ? CD ? B ARG 43 CD 21 1 Y 1 B ARG 80 ? NE ? B ARG 43 NE 22 1 Y 1 B ARG 80 ? CZ ? B ARG 43 CZ 23 1 Y 1 B ARG 80 ? NH1 ? B ARG 43 NH1 24 1 Y 1 B ARG 80 ? NH2 ? B ARG 43 NH2 25 1 Y 1 B MET 83 ? CG ? B MET 46 CG 26 1 Y 1 B MET 83 ? SD ? B MET 46 SD 27 1 Y 1 B MET 83 ? CE ? B MET 46 CE 28 1 Y 1 B LYS 90 ? CG ? B LYS 53 CG 29 1 Y 1 B LYS 90 ? CD ? B LYS 53 CD 30 1 Y 1 B LYS 90 ? CE ? B LYS 53 CE 31 1 Y 1 B LYS 90 ? NZ ? B LYS 53 NZ 32 1 Y 1 B ASP 121 ? CG ? B ASP 84 CG 33 1 Y 1 B ASP 121 ? OD1 ? B ASP 84 OD1 34 1 Y 1 B ASP 121 ? OD2 ? B ASP 84 OD2 35 1 Y 1 B ARG 122 ? CG ? B ARG 85 CG 36 1 Y 1 B ARG 122 ? CD ? B ARG 85 CD 37 1 Y 1 B ARG 122 ? NE ? B ARG 85 NE 38 1 Y 1 B ARG 122 ? CZ ? B ARG 85 CZ 39 1 Y 1 B ARG 122 ? NH1 ? B ARG 85 NH1 40 1 Y 1 B ARG 122 ? NH2 ? B ARG 85 NH2 41 1 Y 1 B ASN 130 ? CG ? B ASN 93 CG 42 1 Y 1 B ASN 130 ? OD1 ? B ASN 93 OD1 43 1 Y 1 B ASN 130 ? ND2 ? B ASN 93 ND2 44 1 Y 1 B GLU 131 ? CG ? B GLU 94 CG 45 1 Y 1 B GLU 131 ? CD ? B GLU 94 CD 46 1 Y 1 B GLU 131 ? OE1 ? B GLU 94 OE1 47 1 Y 1 B GLU 131 ? OE2 ? B GLU 94 OE2 48 1 Y 1 B ASN 132 ? CG ? B ASN 95 CG 49 1 Y 1 B ASN 132 ? OD1 ? B ASN 95 OD1 50 1 Y 1 B ASN 132 ? ND2 ? B ASN 95 ND2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 B ASP 49 ? B ASP 12 2 1 Y 1 B LYS 50 ? B LYS 13 3 1 Y 1 B ALA 51 ? B ALA 14 4 1 Y 1 B ALA 52 ? B ALA 15 5 1 Y 1 B GLY 53 ? B GLY 16 6 1 Y 1 B ASN 54 ? B ASN 17 7 1 Y 1 B PHE 55 ? B PHE 18 8 1 Y 1 B ARG 84 ? B ARG 47 9 1 Y 1 B MET 85 ? B MET 48 10 1 Y 1 B LEU 86 ? B LEU 49 11 1 Y 1 B SER 87 ? B SER 50 12 1 Y 1 B SER 88 ? B SER 51 13 1 Y 1 B PRO 89 ? B PRO 52 14 1 Y 1 B ASN 118 ? B ASN 81 15 1 Y 1 B LYS 119 ? B LYS 82 16 1 Y 1 B ASP 120 ? B ASP 83 17 1 Y 1 B ASP 133 ? B ASP 96 18 1 Y 1 B ALA 134 ? B ALA 97 19 1 Y 1 B ILE 135 ? B ILE 98 20 1 Y 1 B PRO 136 ? B PRO 99 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 GNP PG P N N 137 GNP O1G O N N 138 GNP O2G O N N 139 GNP O3G O N N 140 GNP N3B N N N 141 GNP PB P N R 142 GNP O1B O N N 143 GNP O2B O N N 144 GNP O3A O N N 145 GNP PA P N S 146 GNP O1A O N N 147 GNP O2A O N N 148 GNP "O5'" O N N 149 GNP "C5'" C N N 150 GNP "C4'" C N R 151 GNP "O4'" O N N 152 GNP "C3'" C N S 153 GNP "O3'" O N N 154 GNP "C2'" C N R 155 GNP "O2'" O N N 156 GNP "C1'" C N R 157 GNP N9 N Y N 158 GNP C8 C Y N 159 GNP N7 N Y N 160 GNP C5 C Y N 161 GNP C6 C Y N 162 GNP O6 O N N 163 GNP N1 N Y N 164 GNP C2 C Y N 165 GNP N2 N N N 166 GNP N3 N Y N 167 GNP C4 C Y N 168 GNP HOG2 H N N 169 GNP HOG3 H N N 170 GNP HNB3 H N N 171 GNP HOB2 H N N 172 GNP HOA2 H N N 173 GNP "H5'2" H N N 174 GNP "H5'1" H N N 175 GNP "H4'" H N N 176 GNP "H3'" H N N 177 GNP "HO3'" H N N 178 GNP "H2'" H N N 179 GNP "HO2'" H N N 180 GNP "H1'" H N N 181 GNP H8 H N N 182 GNP HN1 H N N 183 GNP HN21 H N N 184 GNP HN22 H N N 185 HIS N N N N 186 HIS CA C N S 187 HIS C C N N 188 HIS O O N N 189 HIS CB C N N 190 HIS CG C Y N 191 HIS ND1 N Y N 192 HIS CD2 C Y N 193 HIS CE1 C Y N 194 HIS NE2 N Y N 195 HIS OXT O N N 196 HIS H H N N 197 HIS H2 H N N 198 HIS HA H N N 199 HIS HB2 H N N 200 HIS HB3 H N N 201 HIS HD1 H N N 202 HIS HD2 H N N 203 HIS HE1 H N N 204 HIS HE2 H N N 205 HIS HXT H N N 206 HOH O O N N 207 HOH H1 H N N 208 HOH H2 H N N 209 ILE N N N N 210 ILE CA C N S 211 ILE C C N N 212 ILE O O N N 213 ILE CB C N S 214 ILE CG1 C N N 215 ILE CG2 C N N 216 ILE CD1 C N N 217 ILE OXT O N N 218 ILE H H N N 219 ILE H2 H N N 220 ILE HA H N N 221 ILE HB H N N 222 ILE HG12 H N N 223 ILE HG13 H N N 224 ILE HG21 H N N 225 ILE HG22 H N N 226 ILE HG23 H N N 227 ILE HD11 H N N 228 ILE HD12 H N N 229 ILE HD13 H N N 230 ILE HXT H N N 231 LEU N N N N 232 LEU CA C N S 233 LEU C C N N 234 LEU O O N N 235 LEU CB C N N 236 LEU CG C N N 237 LEU CD1 C N N 238 LEU CD2 C N N 239 LEU OXT O N N 240 LEU H H N N 241 LEU H2 H N N 242 LEU HA H N N 243 LEU HB2 H N N 244 LEU HB3 H N N 245 LEU HG H N N 246 LEU HD11 H N N 247 LEU HD12 H N N 248 LEU HD13 H N N 249 LEU HD21 H N N 250 LEU HD22 H N N 251 LEU HD23 H N N 252 LEU HXT H N N 253 LYS N N N N 254 LYS CA C N S 255 LYS C C N N 256 LYS O O N N 257 LYS CB C N N 258 LYS CG C N N 259 LYS CD C N N 260 LYS CE C N N 261 LYS NZ N N N 262 LYS OXT O N N 263 LYS H H N N 264 LYS H2 H N N 265 LYS HA H N N 266 LYS HB2 H N N 267 LYS HB3 H N N 268 LYS HG2 H N N 269 LYS HG3 H N N 270 LYS HD2 H N N 271 LYS HD3 H N N 272 LYS HE2 H N N 273 LYS HE3 H N N 274 LYS HZ1 H N N 275 LYS HZ2 H N N 276 LYS HZ3 H N N 277 LYS HXT H N N 278 MET N N N N 279 MET CA C N S 280 MET C C N N 281 MET O O N N 282 MET CB C N N 283 MET CG C N N 284 MET SD S N N 285 MET CE C N N 286 MET OXT O N N 287 MET H H N N 288 MET H2 H N N 289 MET HA H N N 290 MET HB2 H N N 291 MET HB3 H N N 292 MET HG2 H N N 293 MET HG3 H N N 294 MET HE1 H N N 295 MET HE2 H N N 296 MET HE3 H N N 297 MET HXT H N N 298 MG MG MG N N 299 PHE N N N N 300 PHE CA C N S 301 PHE C C N N 302 PHE O O N N 303 PHE CB C N N 304 PHE CG C Y N 305 PHE CD1 C Y N 306 PHE CD2 C Y N 307 PHE CE1 C Y N 308 PHE CE2 C Y N 309 PHE CZ C Y N 310 PHE OXT O N N 311 PHE H H N N 312 PHE H2 H N N 313 PHE HA H N N 314 PHE HB2 H N N 315 PHE HB3 H N N 316 PHE HD1 H N N 317 PHE HD2 H N N 318 PHE HE1 H N N 319 PHE HE2 H N N 320 PHE HZ H N N 321 PHE HXT H N N 322 PRO N N N N 323 PRO CA C N S 324 PRO C C N N 325 PRO O O N N 326 PRO CB C N N 327 PRO CG C N N 328 PRO CD C N N 329 PRO OXT O N N 330 PRO H H N N 331 PRO HA H N N 332 PRO HB2 H N N 333 PRO HB3 H N N 334 PRO HG2 H N N 335 PRO HG3 H N N 336 PRO HD2 H N N 337 PRO HD3 H N N 338 PRO HXT H N N 339 SER N N N N 340 SER CA C N S 341 SER C C N N 342 SER O O N N 343 SER CB C N N 344 SER OG O N N 345 SER OXT O N N 346 SER H H N N 347 SER H2 H N N 348 SER HA H N N 349 SER HB2 H N N 350 SER HB3 H N N 351 SER HG H N N 352 SER HXT H N N 353 THR N N N N 354 THR CA C N S 355 THR C C N N 356 THR O O N N 357 THR CB C N R 358 THR OG1 O N N 359 THR CG2 C N N 360 THR OXT O N N 361 THR H H N N 362 THR H2 H N N 363 THR HA H N N 364 THR HB H N N 365 THR HG1 H N N 366 THR HG21 H N N 367 THR HG22 H N N 368 THR HG23 H N N 369 THR HXT H N N 370 TRP N N N N 371 TRP CA C N S 372 TRP C C N N 373 TRP O O N N 374 TRP CB C N N 375 TRP CG C Y N 376 TRP CD1 C Y N 377 TRP CD2 C Y N 378 TRP NE1 N Y N 379 TRP CE2 C Y N 380 TRP CE3 C Y N 381 TRP CZ2 C Y N 382 TRP CZ3 C Y N 383 TRP CH2 C Y N 384 TRP OXT O N N 385 TRP H H N N 386 TRP H2 H N N 387 TRP HA H N N 388 TRP HB2 H N N 389 TRP HB3 H N N 390 TRP HD1 H N N 391 TRP HE1 H N N 392 TRP HE3 H N N 393 TRP HZ2 H N N 394 TRP HZ3 H N N 395 TRP HH2 H N N 396 TRP HXT H N N 397 TYR N N N N 398 TYR CA C N S 399 TYR C C N N 400 TYR O O N N 401 TYR CB C N N 402 TYR CG C Y N 403 TYR CD1 C Y N 404 TYR CD2 C Y N 405 TYR CE1 C Y N 406 TYR CE2 C Y N 407 TYR CZ C Y N 408 TYR OH O N N 409 TYR OXT O N N 410 TYR H H N N 411 TYR H2 H N N 412 TYR HA H N N 413 TYR HB2 H N N 414 TYR HB3 H N N 415 TYR HD1 H N N 416 TYR HD2 H N N 417 TYR HE1 H N N 418 TYR HE2 H N N 419 TYR HH H N N 420 TYR HXT H N N 421 VAL N N N N 422 VAL CA C N S 423 VAL C C N N 424 VAL O O N N 425 VAL CB C N N 426 VAL CG1 C N N 427 VAL CG2 C N N 428 VAL OXT O N N 429 VAL H H N N 430 VAL H2 H N N 431 VAL HA H N N 432 VAL HB H N N 433 VAL HG11 H N N 434 VAL HG12 H N N 435 VAL HG13 H N N 436 VAL HG21 H N N 437 VAL HG22 H N N 438 VAL HG23 H N N 439 VAL HXT H N N 440 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 GNP PG O1G doub N N 129 GNP PG O2G sing N N 130 GNP PG O3G sing N N 131 GNP PG N3B sing N N 132 GNP O2G HOG2 sing N N 133 GNP O3G HOG3 sing N N 134 GNP N3B PB sing N N 135 GNP N3B HNB3 sing N N 136 GNP PB O1B doub N N 137 GNP PB O2B sing N N 138 GNP PB O3A sing N N 139 GNP O2B HOB2 sing N N 140 GNP O3A PA sing N N 141 GNP PA O1A doub N N 142 GNP PA O2A sing N N 143 GNP PA "O5'" sing N N 144 GNP O2A HOA2 sing N N 145 GNP "O5'" "C5'" sing N N 146 GNP "C5'" "C4'" sing N N 147 GNP "C5'" "H5'2" sing N N 148 GNP "C5'" "H5'1" sing N N 149 GNP "C4'" "O4'" sing N N 150 GNP "C4'" "C3'" sing N N 151 GNP "C4'" "H4'" sing N N 152 GNP "O4'" "C1'" sing N N 153 GNP "C3'" "O3'" sing N N 154 GNP "C3'" "C2'" sing N N 155 GNP "C3'" "H3'" sing N N 156 GNP "O3'" "HO3'" sing N N 157 GNP "C2'" "O2'" sing N N 158 GNP "C2'" "C1'" sing N N 159 GNP "C2'" "H2'" sing N N 160 GNP "O2'" "HO2'" sing N N 161 GNP "C1'" N9 sing N N 162 GNP "C1'" "H1'" sing N N 163 GNP N9 C8 sing Y N 164 GNP N9 C4 sing Y N 165 GNP C8 N7 doub Y N 166 GNP C8 H8 sing N N 167 GNP N7 C5 sing Y N 168 GNP C5 C6 sing Y N 169 GNP C5 C4 doub Y N 170 GNP C6 O6 doub N N 171 GNP C6 N1 sing Y N 172 GNP N1 C2 sing Y N 173 GNP N1 HN1 sing N N 174 GNP C2 N2 sing N N 175 GNP C2 N3 doub Y N 176 GNP N2 HN21 sing N N 177 GNP N2 HN22 sing N N 178 GNP N3 C4 sing Y N 179 HIS N CA sing N N 180 HIS N H sing N N 181 HIS N H2 sing N N 182 HIS CA C sing N N 183 HIS CA CB sing N N 184 HIS CA HA sing N N 185 HIS C O doub N N 186 HIS C OXT sing N N 187 HIS CB CG sing N N 188 HIS CB HB2 sing N N 189 HIS CB HB3 sing N N 190 HIS CG ND1 sing Y N 191 HIS CG CD2 doub Y N 192 HIS ND1 CE1 doub Y N 193 HIS ND1 HD1 sing N N 194 HIS CD2 NE2 sing Y N 195 HIS CD2 HD2 sing N N 196 HIS CE1 NE2 sing Y N 197 HIS CE1 HE1 sing N N 198 HIS NE2 HE2 sing N N 199 HIS OXT HXT sing N N 200 HOH O H1 sing N N 201 HOH O H2 sing N N 202 ILE N CA sing N N 203 ILE N H sing N N 204 ILE N H2 sing N N 205 ILE CA C sing N N 206 ILE CA CB sing N N 207 ILE CA HA sing N N 208 ILE C O doub N N 209 ILE C OXT sing N N 210 ILE CB CG1 sing N N 211 ILE CB CG2 sing N N 212 ILE CB HB sing N N 213 ILE CG1 CD1 sing N N 214 ILE CG1 HG12 sing N N 215 ILE CG1 HG13 sing N N 216 ILE CG2 HG21 sing N N 217 ILE CG2 HG22 sing N N 218 ILE CG2 HG23 sing N N 219 ILE CD1 HD11 sing N N 220 ILE CD1 HD12 sing N N 221 ILE CD1 HD13 sing N N 222 ILE OXT HXT sing N N 223 LEU N CA sing N N 224 LEU N H sing N N 225 LEU N H2 sing N N 226 LEU CA C sing N N 227 LEU CA CB sing N N 228 LEU CA HA sing N N 229 LEU C O doub N N 230 LEU C OXT sing N N 231 LEU CB CG sing N N 232 LEU CB HB2 sing N N 233 LEU CB HB3 sing N N 234 LEU CG CD1 sing N N 235 LEU CG CD2 sing N N 236 LEU CG HG sing N N 237 LEU CD1 HD11 sing N N 238 LEU CD1 HD12 sing N N 239 LEU CD1 HD13 sing N N 240 LEU CD2 HD21 sing N N 241 LEU CD2 HD22 sing N N 242 LEU CD2 HD23 sing N N 243 LEU OXT HXT sing N N 244 LYS N CA sing N N 245 LYS N H sing N N 246 LYS N H2 sing N N 247 LYS CA C sing N N 248 LYS CA CB sing N N 249 LYS CA HA sing N N 250 LYS C O doub N N 251 LYS C OXT sing N N 252 LYS CB CG sing N N 253 LYS CB HB2 sing N N 254 LYS CB HB3 sing N N 255 LYS CG CD sing N N 256 LYS CG HG2 sing N N 257 LYS CG HG3 sing N N 258 LYS CD CE sing N N 259 LYS CD HD2 sing N N 260 LYS CD HD3 sing N N 261 LYS CE NZ sing N N 262 LYS CE HE2 sing N N 263 LYS CE HE3 sing N N 264 LYS NZ HZ1 sing N N 265 LYS NZ HZ2 sing N N 266 LYS NZ HZ3 sing N N 267 LYS OXT HXT sing N N 268 MET N CA sing N N 269 MET N H sing N N 270 MET N H2 sing N N 271 MET CA C sing N N 272 MET CA CB sing N N 273 MET CA HA sing N N 274 MET C O doub N N 275 MET C OXT sing N N 276 MET CB CG sing N N 277 MET CB HB2 sing N N 278 MET CB HB3 sing N N 279 MET CG SD sing N N 280 MET CG HG2 sing N N 281 MET CG HG3 sing N N 282 MET SD CE sing N N 283 MET CE HE1 sing N N 284 MET CE HE2 sing N N 285 MET CE HE3 sing N N 286 MET OXT HXT sing N N 287 PHE N CA sing N N 288 PHE N H sing N N 289 PHE N H2 sing N N 290 PHE CA C sing N N 291 PHE CA CB sing N N 292 PHE CA HA sing N N 293 PHE C O doub N N 294 PHE C OXT sing N N 295 PHE CB CG sing N N 296 PHE CB HB2 sing N N 297 PHE CB HB3 sing N N 298 PHE CG CD1 doub Y N 299 PHE CG CD2 sing Y N 300 PHE CD1 CE1 sing Y N 301 PHE CD1 HD1 sing N N 302 PHE CD2 CE2 doub Y N 303 PHE CD2 HD2 sing N N 304 PHE CE1 CZ doub Y N 305 PHE CE1 HE1 sing N N 306 PHE CE2 CZ sing Y N 307 PHE CE2 HE2 sing N N 308 PHE CZ HZ sing N N 309 PHE OXT HXT sing N N 310 PRO N CA sing N N 311 PRO N CD sing N N 312 PRO N H sing N N 313 PRO CA C sing N N 314 PRO CA CB sing N N 315 PRO CA HA sing N N 316 PRO C O doub N N 317 PRO C OXT sing N N 318 PRO CB CG sing N N 319 PRO CB HB2 sing N N 320 PRO CB HB3 sing N N 321 PRO CG CD sing N N 322 PRO CG HG2 sing N N 323 PRO CG HG3 sing N N 324 PRO CD HD2 sing N N 325 PRO CD HD3 sing N N 326 PRO OXT HXT sing N N 327 SER N CA sing N N 328 SER N H sing N N 329 SER N H2 sing N N 330 SER CA C sing N N 331 SER CA CB sing N N 332 SER CA HA sing N N 333 SER C O doub N N 334 SER C OXT sing N N 335 SER CB OG sing N N 336 SER CB HB2 sing N N 337 SER CB HB3 sing N N 338 SER OG HG sing N N 339 SER OXT HXT sing N N 340 THR N CA sing N N 341 THR N H sing N N 342 THR N H2 sing N N 343 THR CA C sing N N 344 THR CA CB sing N N 345 THR CA HA sing N N 346 THR C O doub N N 347 THR C OXT sing N N 348 THR CB OG1 sing N N 349 THR CB CG2 sing N N 350 THR CB HB sing N N 351 THR OG1 HG1 sing N N 352 THR CG2 HG21 sing N N 353 THR CG2 HG22 sing N N 354 THR CG2 HG23 sing N N 355 THR OXT HXT sing N N 356 TRP N CA sing N N 357 TRP N H sing N N 358 TRP N H2 sing N N 359 TRP CA C sing N N 360 TRP CA CB sing N N 361 TRP CA HA sing N N 362 TRP C O doub N N 363 TRP C OXT sing N N 364 TRP CB CG sing N N 365 TRP CB HB2 sing N N 366 TRP CB HB3 sing N N 367 TRP CG CD1 doub Y N 368 TRP CG CD2 sing Y N 369 TRP CD1 NE1 sing Y N 370 TRP CD1 HD1 sing N N 371 TRP CD2 CE2 doub Y N 372 TRP CD2 CE3 sing Y N 373 TRP NE1 CE2 sing Y N 374 TRP NE1 HE1 sing N N 375 TRP CE2 CZ2 sing Y N 376 TRP CE3 CZ3 doub Y N 377 TRP CE3 HE3 sing N N 378 TRP CZ2 CH2 doub Y N 379 TRP CZ2 HZ2 sing N N 380 TRP CZ3 CH2 sing Y N 381 TRP CZ3 HZ3 sing N N 382 TRP CH2 HH2 sing N N 383 TRP OXT HXT sing N N 384 TYR N CA sing N N 385 TYR N H sing N N 386 TYR N H2 sing N N 387 TYR CA C sing N N 388 TYR CA CB sing N N 389 TYR CA HA sing N N 390 TYR C O doub N N 391 TYR C OXT sing N N 392 TYR CB CG sing N N 393 TYR CB HB2 sing N N 394 TYR CB HB3 sing N N 395 TYR CG CD1 doub Y N 396 TYR CG CD2 sing Y N 397 TYR CD1 CE1 sing Y N 398 TYR CD1 HD1 sing N N 399 TYR CD2 CE2 doub Y N 400 TYR CD2 HD2 sing N N 401 TYR CE1 CZ doub Y N 402 TYR CE1 HE1 sing N N 403 TYR CE2 CZ sing Y N 404 TYR CE2 HE2 sing N N 405 TYR CZ OH sing N N 406 TYR OH HH sing N N 407 TYR OXT HXT sing N N 408 VAL N CA sing N N 409 VAL N H sing N N 410 VAL N H2 sing N N 411 VAL CA C sing N N 412 VAL CA CB sing N N 413 VAL CA HA sing N N 414 VAL C O doub N N 415 VAL C OXT sing N N 416 VAL CB CG1 sing N N 417 VAL CB CG2 sing N N 418 VAL CB HB sing N N 419 VAL CG1 HG11 sing N N 420 VAL CG1 HG12 sing N N 421 VAL CG1 HG13 sing N N 422 VAL CG2 HG21 sing N N 423 VAL CG2 HG22 sing N N 424 VAL CG2 HG23 sing N N 425 VAL OXT HXT sing N N 426 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER' GNP 4 'MAGNESIUM ION' MG 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3DDC _pdbx_initial_refinement_model.details 'PDB entry 3DDC' # loop_ _pdbx_struct_assembly_auth_evidence.id _pdbx_struct_assembly_auth_evidence.assembly_id _pdbx_struct_assembly_auth_evidence.experimental_support _pdbx_struct_assembly_auth_evidence.details 1 1 'isothermal titration calorimetry' ? 2 1 immunoprecipitation ? #