HEADER IMMUNE SYSTEM 15-AUG-17 6AO3 TITLE CRYSTAL STRUCTURE OF THE MURINE GASDERMIN D C-TERMINAL DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: GASDERMIN-D; COMPND 3 CHAIN: A, B, C, D; COMPND 4 FRAGMENT: UNP RESIDUES 277-487; COMPND 5 SYNONYM: GASDERMIN DOMAIN-CONTAINING PROTEIN 1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: GSDMDC1, GSDMD; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3) CODON PLUS RIPL KEYWDS INFLAMMASOME, PYROPTOSIS, GASDERMIN D, AUTOINHIBITION, SALMONELLA KEYWDS 2 INFECTION, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR Z.LIU,C.WANG,J.YANG,T.S.XIAO REVDAT 4 13-MAR-24 6AO3 1 REMARK REVDAT 3 11-DEC-19 6AO3 1 REMARK REVDAT 2 09-MAY-18 6AO3 1 JRNL REVDAT 1 11-APR-18 6AO3 0 JRNL AUTH Z.LIU,C.WANG,J.K.RATHKEY,J.YANG,G.R.DUBYAK,D.W.ABBOTT, JRNL AUTH 2 T.S.XIAO JRNL TITL STRUCTURES OF THE GASDERMIN D C-TERMINAL DOMAINS REVEAL JRNL TITL 2 MECHANISMS OF AUTOINHIBITION. JRNL REF STRUCTURE V. 26 778 2018 JRNL REFN ISSN 1878-4186 JRNL PMID 29576317 JRNL DOI 10.1016/J.STR.2018.03.002 REMARK 2 REMARK 2 RESOLUTION. 1.76 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10.1_2155: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.76 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.76 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 92.7 REMARK 3 NUMBER OF REFLECTIONS : 71700 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.163 REMARK 3 R VALUE (WORKING SET) : 0.161 REMARK 3 FREE R VALUE : 0.186 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.990 REMARK 3 FREE R VALUE TEST SET COUNT : 3575 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 34.7672 - 5.2084 0.97 2746 146 0.1801 0.1839 REMARK 3 2 5.2084 - 4.1362 0.98 2749 147 0.1424 0.1514 REMARK 3 3 4.1362 - 3.6140 0.98 2793 148 0.1351 0.1555 REMARK 3 4 3.6140 - 3.2838 0.98 2734 154 0.1447 0.1785 REMARK 3 5 3.2838 - 3.0486 0.98 2762 145 0.1553 0.1834 REMARK 3 6 3.0486 - 2.8690 0.98 2784 156 0.1538 0.1746 REMARK 3 7 2.8690 - 2.7253 0.98 2753 139 0.1597 0.1777 REMARK 3 8 2.7253 - 2.6067 0.97 2777 133 0.1581 0.1736 REMARK 3 9 2.6067 - 2.5064 0.97 2754 133 0.1587 0.1962 REMARK 3 10 2.5064 - 2.4200 0.96 2739 133 0.1656 0.2149 REMARK 3 11 2.4200 - 2.3443 0.96 2698 144 0.1666 0.1961 REMARK 3 12 2.3443 - 2.2773 0.95 2641 145 0.1527 0.1807 REMARK 3 13 2.2773 - 2.2174 0.95 2711 150 0.1482 0.1751 REMARK 3 14 2.2174 - 2.1633 0.94 2628 141 0.1548 0.1786 REMARK 3 15 2.1633 - 2.1141 0.94 2686 135 0.1645 0.2047 REMARK 3 16 2.1141 - 2.0691 0.93 2663 130 0.1671 0.2152 REMARK 3 17 2.0691 - 2.0277 0.92 2593 127 0.1675 0.2051 REMARK 3 18 2.0277 - 1.9895 0.92 2602 126 0.1715 0.2062 REMARK 3 19 1.9895 - 1.9539 0.91 2558 125 0.1811 0.2341 REMARK 3 20 1.9539 - 1.9208 0.88 2525 149 0.1872 0.2182 REMARK 3 21 1.9208 - 1.8898 0.87 2419 119 0.1951 0.2405 REMARK 3 22 1.8898 - 1.8608 0.86 2463 133 0.1993 0.2160 REMARK 3 23 1.8608 - 1.8334 0.85 2368 137 0.2077 0.2512 REMARK 3 24 1.8334 - 1.8076 0.83 2331 132 0.2171 0.2359 REMARK 3 25 1.8076 - 1.7832 0.83 2384 123 0.2391 0.2616 REMARK 3 26 1.7832 - 1.7600 0.81 2264 125 0.2494 0.2573 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.170 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 17.930 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 6125 REMARK 3 ANGLE : 1.016 8353 REMARK 3 CHIRALITY : 0.059 1009 REMARK 3 PLANARITY : 0.007 1071 REMARK 3 DIHEDRAL : 17.007 3733 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 27 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 286 THROUGH 307 ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.1408 30.4166 69.9067 REMARK 3 T TENSOR REMARK 3 T11: 0.1818 T22: 0.1129 REMARK 3 T33: 0.1299 T12: -0.0038 REMARK 3 T13: 0.0372 T23: -0.0226 REMARK 3 L TENSOR REMARK 3 L11: 4.2218 L22: 4.0505 REMARK 3 L33: 6.7359 L12: -1.5182 REMARK 3 L13: 2.2431 L23: -1.8190 REMARK 3 S TENSOR REMARK 3 S11: 0.1454 S12: 0.1568 S13: -0.0408 REMARK 3 S21: -0.2400 S22: -0.0422 S23: 0.0505 REMARK 3 S31: -0.0325 S32: 0.0752 S33: -0.0986 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 308 THROUGH 367 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.4592 45.2510 68.9126 REMARK 3 T TENSOR REMARK 3 T11: 0.1653 T22: 0.1291 REMARK 3 T33: 0.1713 T12: 0.0365 REMARK 3 T13: -0.0191 T23: 0.0387 REMARK 3 L TENSOR REMARK 3 L11: 3.7867 L22: 5.6265 REMARK 3 L33: 1.6016 L12: 0.2878 REMARK 3 L13: -0.5756 L23: 0.6878 REMARK 3 S TENSOR REMARK 3 S11: -0.0026 S12: 0.1124 S13: 0.1861 REMARK 3 S21: -0.2407 S22: -0.0022 S23: 0.1157 REMARK 3 S31: -0.0393 S32: -0.0713 S33: 0.0220 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 368 THROUGH 399 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.7312 43.0884 76.0536 REMARK 3 T TENSOR REMARK 3 T11: 0.1429 T22: 0.1293 REMARK 3 T33: 0.1786 T12: 0.0304 REMARK 3 T13: -0.0051 T23: -0.0047 REMARK 3 L TENSOR REMARK 3 L11: 3.4180 L22: 3.1205 REMARK 3 L33: 3.4062 L12: 0.5365 REMARK 3 L13: 2.0818 L23: 1.1820 REMARK 3 S TENSOR REMARK 3 S11: -0.1633 S12: 0.0149 S13: 0.3599 REMARK 3 S21: -0.0905 S22: 0.0680 S23: -0.0866 REMARK 3 S31: -0.1960 S32: 0.0960 S33: 0.0873 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 400 THROUGH 484 ) REMARK 3 ORIGIN FOR THE GROUP (A): 37.6835 38.2229 83.2057 REMARK 3 T TENSOR REMARK 3 T11: 0.1563 T22: 0.1618 REMARK 3 T33: 0.1953 T12: 0.0220 REMARK 3 T13: -0.0142 T23: -0.0508 REMARK 3 L TENSOR REMARK 3 L11: 2.2606 L22: 1.3903 REMARK 3 L33: 1.4415 L12: -0.3969 REMARK 3 L13: 0.7631 L23: -0.2532 REMARK 3 S TENSOR REMARK 3 S11: -0.0456 S12: -0.1414 S13: 0.2350 REMARK 3 S21: 0.0739 S22: 0.0303 S23: -0.1972 REMARK 3 S31: -0.0814 S32: 0.1361 S33: -0.0026 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 286 THROUGH 307 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.8708 27.3267 69.4957 REMARK 3 T TENSOR REMARK 3 T11: 0.1580 T22: 0.1123 REMARK 3 T33: 0.1328 T12: 0.0148 REMARK 3 T13: -0.0278 T23: 0.0301 REMARK 3 L TENSOR REMARK 3 L11: 3.3235 L22: 3.3308 REMARK 3 L33: 7.2149 L12: -0.5414 REMARK 3 L13: -2.7795 L23: 1.6371 REMARK 3 S TENSOR REMARK 3 S11: 0.1286 S12: 0.0615 S13: 0.1299 REMARK 3 S21: -0.1430 S22: -0.0244 S23: -0.0533 REMARK 3 S31: -0.1973 S32: -0.0233 S33: -0.1821 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 308 THROUGH 324 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.8416 9.9967 62.7616 REMARK 3 T TENSOR REMARK 3 T11: 0.1363 T22: 0.1269 REMARK 3 T33: 0.1830 T12: 0.0028 REMARK 3 T13: -0.0091 T23: -0.0303 REMARK 3 L TENSOR REMARK 3 L11: 3.3692 L22: 7.4044 REMARK 3 L33: 8.3905 L12: -1.6181 REMARK 3 L13: 1.2583 L23: -4.4918 REMARK 3 S TENSOR REMARK 3 S11: 0.1284 S12: 0.2619 S13: -0.3382 REMARK 3 S21: -0.3202 S22: -0.0023 S23: 0.4909 REMARK 3 S31: 0.1600 S32: -0.0618 S33: -0.2249 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 325 THROUGH 341 ) REMARK 3 ORIGIN FOR THE GROUP (A): 32.5171 14.6100 72.0197 REMARK 3 T TENSOR REMARK 3 T11: 0.1857 T22: 0.1689 REMARK 3 T33: 0.1506 T12: 0.0448 REMARK 3 T13: 0.0128 T23: -0.0066 REMARK 3 L TENSOR REMARK 3 L11: 5.0336 L22: 2.9733 REMARK 3 L33: 2.4696 L12: 3.3159 REMARK 3 L13: -0.4091 L23: -1.5869 REMARK 3 S TENSOR REMARK 3 S11: 0.1833 S12: -0.2637 S13: 0.0282 REMARK 3 S21: 0.5265 S22: -0.0910 S23: 0.0137 REMARK 3 S31: -0.1344 S32: 0.0416 S33: -0.0882 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 342 THROUGH 358 ) REMARK 3 ORIGIN FOR THE GROUP (A): 33.6928 11.6362 62.7596 REMARK 3 T TENSOR REMARK 3 T11: 0.1844 T22: 0.2057 REMARK 3 T33: 0.1607 T12: 0.0186 REMARK 3 T13: 0.0534 T23: -0.0412 REMARK 3 L TENSOR REMARK 3 L11: 4.3564 L22: 7.2462 REMARK 3 L33: 2.2149 L12: 2.3341 REMARK 3 L13: 0.3686 L23: -0.2754 REMARK 3 S TENSOR REMARK 3 S11: -0.1636 S12: 0.2742 S13: -0.2673 REMARK 3 S21: -0.2838 S22: 0.2202 S23: -0.3609 REMARK 3 S31: 0.1577 S32: 0.3523 S33: -0.0651 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 359 THROUGH 383 ) REMARK 3 ORIGIN FOR THE GROUP (A): 28.5964 19.8806 66.3699 REMARK 3 T TENSOR REMARK 3 T11: 0.1145 T22: 0.1216 REMARK 3 T33: 0.0998 T12: -0.0071 REMARK 3 T13: 0.0131 T23: 0.0103 REMARK 3 L TENSOR REMARK 3 L11: 4.2146 L22: 2.1028 REMARK 3 L33: 3.2278 L12: 0.4887 REMARK 3 L13: -2.0392 L23: 0.1869 REMARK 3 S TENSOR REMARK 3 S11: -0.0722 S12: 0.1627 S13: 0.0271 REMARK 3 S21: -0.2557 S22: 0.0976 S23: -0.1449 REMARK 3 S31: -0.0282 S32: 0.1072 S33: -0.0536 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 384 THROUGH 399 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.1190 7.3780 73.6080 REMARK 3 T TENSOR REMARK 3 T11: 0.1568 T22: 0.1379 REMARK 3 T33: 0.1919 T12: 0.0478 REMARK 3 T13: 0.0230 T23: 0.0003 REMARK 3 L TENSOR REMARK 3 L11: 5.5478 L22: 4.0192 REMARK 3 L33: 6.2245 L12: 0.6169 REMARK 3 L13: 0.7582 L23: 0.9822 REMARK 3 S TENSOR REMARK 3 S11: 0.0188 S12: 0.3048 S13: -0.4689 REMARK 3 S21: -0.1795 S22: -0.1244 S23: 0.1178 REMARK 3 S31: 0.3418 S32: 0.1281 S33: 0.0690 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 400 THROUGH 414 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.5464 18.7790 74.7953 REMARK 3 T TENSOR REMARK 3 T11: 0.0927 T22: 0.1539 REMARK 3 T33: 0.1570 T12: 0.0176 REMARK 3 T13: -0.0025 T23: 0.0232 REMARK 3 L TENSOR REMARK 3 L11: 2.0877 L22: 4.7296 REMARK 3 L33: 7.7931 L12: -1.1526 REMARK 3 L13: -1.7010 L23: 4.2621 REMARK 3 S TENSOR REMARK 3 S11: 0.1069 S12: 0.1583 S13: -0.3100 REMARK 3 S21: -0.0530 S22: -0.1009 S23: 0.3185 REMARK 3 S31: -0.1449 S32: -0.4618 S33: -0.0155 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 415 THROUGH 431 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.4250 21.4082 83.9279 REMARK 3 T TENSOR REMARK 3 T11: 0.1428 T22: 0.1651 REMARK 3 T33: 0.1294 T12: 0.0332 REMARK 3 T13: -0.0237 T23: 0.0249 REMARK 3 L TENSOR REMARK 3 L11: 1.3544 L22: 1.7173 REMARK 3 L33: 2.3489 L12: 0.2937 REMARK 3 L13: -0.2909 L23: 0.3083 REMARK 3 S TENSOR REMARK 3 S11: 0.1672 S12: -0.2019 S13: 0.0032 REMARK 3 S21: 0.0891 S22: -0.1501 S23: 0.0820 REMARK 3 S31: 0.1007 S32: -0.2073 S33: -0.0629 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 432 THROUGH 462 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.7074 10.7303 84.3941 REMARK 3 T TENSOR REMARK 3 T11: 0.1381 T22: 0.1563 REMARK 3 T33: 0.1149 T12: 0.0027 REMARK 3 T13: -0.0070 T23: 0.0522 REMARK 3 L TENSOR REMARK 3 L11: 2.9340 L22: 3.4179 REMARK 3 L33: 1.4326 L12: 0.4545 REMARK 3 L13: -0.3007 L23: 0.8060 REMARK 3 S TENSOR REMARK 3 S11: 0.0691 S12: -0.0890 S13: -0.2906 REMARK 3 S21: 0.1142 S22: -0.0849 S23: 0.0571 REMARK 3 S31: 0.1726 S32: -0.0476 S33: 0.0173 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 463 THROUGH 483 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.8392 19.4510 76.1196 REMARK 3 T TENSOR REMARK 3 T11: 0.1082 T22: 0.0920 REMARK 3 T33: 0.1377 T12: 0.0019 REMARK 3 T13: 0.0075 T23: 0.0092 REMARK 3 L TENSOR REMARK 3 L11: 2.5859 L22: 1.8624 REMARK 3 L33: 7.0941 L12: -0.9251 REMARK 3 L13: -2.7188 L23: 1.1202 REMARK 3 S TENSOR REMARK 3 S11: 0.0269 S12: -0.0745 S13: 0.0314 REMARK 3 S21: 0.0516 S22: 0.0539 S23: 0.1015 REMARK 3 S31: -0.0773 S32: 0.0224 S33: -0.0726 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 287 THROUGH 324 ) REMARK 3 ORIGIN FOR THE GROUP (A): 41.0490 22.8555 43.0278 REMARK 3 T TENSOR REMARK 3 T11: 0.1120 T22: 0.1856 REMARK 3 T33: 0.1787 T12: -0.0003 REMARK 3 T13: 0.0411 T23: 0.0012 REMARK 3 L TENSOR REMARK 3 L11: 2.4696 L22: 4.0001 REMARK 3 L33: 1.9476 L12: 1.0897 REMARK 3 L13: 1.0495 L23: 0.9194 REMARK 3 S TENSOR REMARK 3 S11: 0.0479 S12: -0.1413 S13: 0.1505 REMARK 3 S21: 0.2046 S22: -0.1072 S23: 0.1689 REMARK 3 S31: 0.0541 S32: -0.0388 S33: 0.0553 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 325 THROUGH 341 ) REMARK 3 ORIGIN FOR THE GROUP (A): 55.3586 26.8884 36.6691 REMARK 3 T TENSOR REMARK 3 T11: 0.1790 T22: 0.2570 REMARK 3 T33: 0.1735 T12: -0.0182 REMARK 3 T13: -0.0179 T23: 0.0111 REMARK 3 L TENSOR REMARK 3 L11: 5.6559 L22: 3.2900 REMARK 3 L33: 4.0741 L12: -3.5807 REMARK 3 L13: 1.8038 L23: -2.9768 REMARK 3 S TENSOR REMARK 3 S11: 0.2008 S12: 0.5253 S13: 0.1868 REMARK 3 S21: -0.4855 S22: -0.2632 S23: -0.1920 REMARK 3 S31: 0.0471 S32: 0.1293 S33: 0.0609 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 342 THROUGH 359 ) REMARK 3 ORIGIN FOR THE GROUP (A): 56.1802 30.4894 45.7769 REMARK 3 T TENSOR REMARK 3 T11: 0.1738 T22: 0.2209 REMARK 3 T33: 0.2100 T12: -0.0347 REMARK 3 T13: -0.0295 T23: -0.0382 REMARK 3 L TENSOR REMARK 3 L11: 5.7047 L22: 6.0359 REMARK 3 L33: 3.0245 L12: -1.9728 REMARK 3 L13: 0.0300 L23: -0.6991 REMARK 3 S TENSOR REMARK 3 S11: -0.0638 S12: -0.5785 S13: 0.6564 REMARK 3 S21: 0.4061 S22: 0.0698 S23: -0.3836 REMARK 3 S31: -0.4326 S32: 0.3700 S33: -0.0047 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 360 THROUGH 399 ) REMARK 3 ORIGIN FOR THE GROUP (A): 45.1922 27.1194 39.1814 REMARK 3 T TENSOR REMARK 3 T11: 0.1204 T22: 0.1404 REMARK 3 T33: 0.1161 T12: -0.0219 REMARK 3 T13: 0.0103 T23: -0.0039 REMARK 3 L TENSOR REMARK 3 L11: 3.3842 L22: 1.3195 REMARK 3 L33: 1.9267 L12: -0.4421 REMARK 3 L13: 1.4691 L23: -0.1715 REMARK 3 S TENSOR REMARK 3 S11: -0.0046 S12: -0.0903 S13: 0.1587 REMARK 3 S21: 0.1098 S22: -0.0017 S23: 0.0501 REMARK 3 S31: -0.0576 S32: 0.0913 S33: 0.0390 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 400 THROUGH 430 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.1584 20.1634 29.5030 REMARK 3 T TENSOR REMARK 3 T11: 0.1664 T22: 0.2181 REMARK 3 T33: 0.1639 T12: -0.0291 REMARK 3 T13: -0.0014 T23: 0.0293 REMARK 3 L TENSOR REMARK 3 L11: 2.0103 L22: 2.7811 REMARK 3 L33: 2.4228 L12: -0.7205 REMARK 3 L13: 0.1311 L23: 1.4200 REMARK 3 S TENSOR REMARK 3 S11: 0.1644 S12: 0.1817 S13: -0.0832 REMARK 3 S21: -0.0635 S22: -0.0069 S23: -0.0689 REMARK 3 S31: 0.1677 S32: -0.1997 S33: -0.0950 REMARK 3 TLS GROUP : 20 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 431 THROUGH 462 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.3664 29.7086 24.4932 REMARK 3 T TENSOR REMARK 3 T11: 0.1533 T22: 0.2229 REMARK 3 T33: 0.1073 T12: -0.0078 REMARK 3 T13: -0.0093 T23: 0.0716 REMARK 3 L TENSOR REMARK 3 L11: 3.4236 L22: 3.6843 REMARK 3 L33: 3.7546 L12: 0.0752 REMARK 3 L13: 0.3671 L23: 0.6518 REMARK 3 S TENSOR REMARK 3 S11: -0.0461 S12: 0.1813 S13: 0.2019 REMARK 3 S21: -0.0690 S22: -0.0096 S23: 0.1128 REMARK 3 S31: -0.1190 S32: -0.0315 S33: 0.0110 REMARK 3 TLS GROUP : 21 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 463 THROUGH 484 ) REMARK 3 ORIGIN FOR THE GROUP (A): 36.5860 21.9622 34.0359 REMARK 3 T TENSOR REMARK 3 T11: 0.0860 T22: 0.1266 REMARK 3 T33: 0.1759 T12: 0.0095 REMARK 3 T13: 0.0080 T23: 0.0115 REMARK 3 L TENSOR REMARK 3 L11: 3.5151 L22: 3.5162 REMARK 3 L33: 6.7634 L12: 1.0212 REMARK 3 L13: 2.8615 L23: 1.0753 REMARK 3 S TENSOR REMARK 3 S11: 0.0028 S12: 0.0060 S13: -0.0535 REMARK 3 S21: 0.0062 S22: -0.0316 S23: -0.0530 REMARK 3 S31: -0.0740 S32: 0.1152 S33: 0.0230 REMARK 3 TLS GROUP : 22 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 286 THROUGH 324 ) REMARK 3 ORIGIN FOR THE GROUP (A): 47.9184 3.2634 42.1915 REMARK 3 T TENSOR REMARK 3 T11: 0.2553 T22: 0.1961 REMARK 3 T33: 0.3486 T12: 0.0217 REMARK 3 T13: -0.0141 T23: 0.0235 REMARK 3 L TENSOR REMARK 3 L11: 2.9017 L22: 4.0611 REMARK 3 L33: 1.4131 L12: 1.0717 REMARK 3 L13: -0.7789 L23: -0.0393 REMARK 3 S TENSOR REMARK 3 S11: 0.0515 S12: -0.2872 S13: -0.7139 REMARK 3 S21: 0.5944 S22: -0.2049 S23: -0.1723 REMARK 3 S31: 0.1072 S32: 0.1470 S33: 0.0177 REMARK 3 TLS GROUP : 23 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 325 THROUGH 358 ) REMARK 3 ORIGIN FOR THE GROUP (A): 32.9303 -2.9648 39.9062 REMARK 3 T TENSOR REMARK 3 T11: 0.2740 T22: 0.2418 REMARK 3 T33: 0.5091 T12: -0.0576 REMARK 3 T13: 0.1159 T23: 0.0060 REMARK 3 L TENSOR REMARK 3 L11: 2.7385 L22: 4.6171 REMARK 3 L33: 1.8508 L12: 0.0937 REMARK 3 L13: 1.0912 L23: 0.2430 REMARK 3 S TENSOR REMARK 3 S11: -0.1662 S12: 0.2146 S13: -0.7208 REMARK 3 S21: 0.5363 S22: 0.0196 S23: 0.4271 REMARK 3 S31: 0.1796 S32: -0.1513 S33: 0.0651 REMARK 3 TLS GROUP : 24 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 359 THROUGH 398 ) REMARK 3 ORIGIN FOR THE GROUP (A): 42.9617 -0.8429 38.3854 REMARK 3 T TENSOR REMARK 3 T11: 0.1835 T22: 0.1424 REMARK 3 T33: 0.3789 T12: -0.0327 REMARK 3 T13: 0.0280 T23: -0.0412 REMARK 3 L TENSOR REMARK 3 L11: 2.8308 L22: 3.8392 REMARK 3 L33: 3.1997 L12: -0.4295 REMARK 3 L13: -0.3039 L23: 0.9067 REMARK 3 S TENSOR REMARK 3 S11: -0.1603 S12: 0.1216 S13: -0.8702 REMARK 3 S21: 0.3653 S22: 0.0530 S23: 0.0156 REMARK 3 S31: 0.2789 S32: -0.0690 S33: 0.1253 REMARK 3 TLS GROUP : 25 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 399 THROUGH 431 ) REMARK 3 ORIGIN FOR THE GROUP (A): 63.0016 5.8413 29.4345 REMARK 3 T TENSOR REMARK 3 T11: 0.2284 T22: 0.2864 REMARK 3 T33: 0.3910 T12: -0.0719 REMARK 3 T13: 0.0359 T23: -0.1593 REMARK 3 L TENSOR REMARK 3 L11: 3.2308 L22: 1.5851 REMARK 3 L33: 2.6616 L12: -0.8196 REMARK 3 L13: 0.4645 L23: -0.9616 REMARK 3 S TENSOR REMARK 3 S11: 0.0378 S12: 0.2853 S13: -0.5119 REMARK 3 S21: -0.0926 S22: 0.1133 S23: -0.3050 REMARK 3 S31: -0.1030 S32: 0.4390 S33: -0.2633 REMARK 3 TLS GROUP : 26 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 432 THROUGH 462 ) REMARK 3 ORIGIN FOR THE GROUP (A): 63.4586 -2.5539 22.8614 REMARK 3 T TENSOR REMARK 3 T11: 0.3286 T22: 0.4265 REMARK 3 T33: 0.5428 T12: -0.0628 REMARK 3 T13: 0.0243 T23: -0.2536 REMARK 3 L TENSOR REMARK 3 L11: 2.8138 L22: 2.8404 REMARK 3 L33: 1.4102 L12: 0.1272 REMARK 3 L13: -0.4116 L23: 0.6212 REMARK 3 S TENSOR REMARK 3 S11: 0.0911 S12: 0.4918 S13: -0.7535 REMARK 3 S21: 0.0688 S22: -0.2525 S23: -0.2723 REMARK 3 S31: 0.0833 S32: -0.0126 S33: -0.1240 REMARK 3 TLS GROUP : 27 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 463 THROUGH 483 ) REMARK 3 ORIGIN FOR THE GROUP (A): 52.2518 4.7248 32.5275 REMARK 3 T TENSOR REMARK 3 T11: 0.1872 T22: 0.2175 REMARK 3 T33: 0.2700 T12: -0.0373 REMARK 3 T13: 0.0183 T23: -0.0749 REMARK 3 L TENSOR REMARK 3 L11: 3.0488 L22: 2.6442 REMARK 3 L33: 2.9999 L12: 0.1148 REMARK 3 L13: -1.0189 L23: -0.1058 REMARK 3 S TENSOR REMARK 3 S11: -0.0985 S12: 0.4181 S13: -0.5807 REMARK 3 S21: 0.0504 S22: 0.0840 S23: -0.3087 REMARK 3 S31: -0.1010 S32: -0.0415 S33: -0.0028 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6AO3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-AUG-17. REMARK 100 THE DEPOSITION ID IS D_1000229544. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-JUL-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9800 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 75173 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.760 REMARK 200 RESOLUTION RANGE LOW (A) : 79.200 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.1 REMARK 200 DATA REDUNDANCY : 2.930 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.76 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.81 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.8 REMARK 200 DATA REDUNDANCY IN SHELL : 2.88 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.070 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.78 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.19 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25% (V/V) POLYETHYLENE GLYCOL (PEG) REMARK 280 3350, 0.1 M BIS-TRIS (PH 5.5), 0.2 M MGCL2, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 276 REMARK 465 GLY A 277 REMARK 465 ILE A 278 REMARK 465 ASP A 279 REMARK 465 GLU A 280 REMARK 465 GLU A 281 REMARK 465 GLU A 282 REMARK 465 LEU A 283 REMARK 465 ILE A 284 REMARK 465 GLU A 285 REMARK 465 LYS A 485 REMARK 465 PRO A 486 REMARK 465 CYS A 487 REMARK 465 SER B 276 REMARK 465 GLY B 277 REMARK 465 ILE B 278 REMARK 465 ASP B 279 REMARK 465 GLU B 280 REMARK 465 GLU B 281 REMARK 465 GLU B 282 REMARK 465 LEU B 283 REMARK 465 ILE B 284 REMARK 465 GLU B 285 REMARK 465 GLN B 484 REMARK 465 LYS B 485 REMARK 465 PRO B 486 REMARK 465 CYS B 487 REMARK 465 SER C 276 REMARK 465 GLY C 277 REMARK 465 ILE C 278 REMARK 465 ASP C 279 REMARK 465 GLU C 280 REMARK 465 GLU C 281 REMARK 465 GLU C 282 REMARK 465 LEU C 283 REMARK 465 ILE C 284 REMARK 465 GLU C 285 REMARK 465 ALA C 286 REMARK 465 LYS C 485 REMARK 465 PRO C 486 REMARK 465 CYS C 487 REMARK 465 SER D 276 REMARK 465 GLY D 277 REMARK 465 ILE D 278 REMARK 465 ASP D 279 REMARK 465 GLU D 280 REMARK 465 GLU D 281 REMARK 465 GLU D 282 REMARK 465 LEU D 283 REMARK 465 ILE D 284 REMARK 465 GLU D 285 REMARK 465 GLN D 484 REMARK 465 LYS D 485 REMARK 465 PRO D 486 REMARK 465 CYS D 487 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH C 635 O HOH C 636 1.81 REMARK 500 OG1 THR D 464 O HOH D 501 1.83 REMARK 500 O HOH B 642 O HOH B 650 1.89 REMARK 500 NZ LYS B 438 O HOH B 501 1.92 REMARK 500 O HOH D 503 O HOH D 507 1.93 REMARK 500 O HOH D 596 O HOH D 603 1.96 REMARK 500 OE1 GLU B 304 O HOH B 502 1.96 REMARK 500 O HOH B 523 O HOH B 584 1.97 REMARK 500 O HOH A 520 O HOH A 623 1.98 REMARK 500 O HOH B 573 O HOH B 623 1.98 REMARK 500 OE1 GLU C 304 O HOH C 501 1.99 REMARK 500 O HOH B 625 O HOH B 662 2.01 REMARK 500 O HOH C 622 O HOH C 637 2.02 REMARK 500 OE1 GLU D 304 O HOH D 502 2.06 REMARK 500 OG SER C 301 O HOH C 502 2.06 REMARK 500 O HOH A 569 O HOH A 616 2.08 REMARK 500 OG SER A 363 OE1 GLU A 365 2.09 REMARK 500 OG SER B 301 O HOH B 503 2.11 REMARK 500 O HOH B 598 O HOH B 652 2.12 REMARK 500 O HOH A 606 O HOH A 623 2.12 REMARK 500 O HOH B 554 O HOH B 654 2.14 REMARK 500 O HOH B 578 O HOH B 597 2.15 REMARK 500 O HOH C 514 O HOH C 560 2.15 REMARK 500 O HOH D 586 O HOH D 595 2.16 REMARK 500 O HOH D 542 O HOH D 585 2.18 REMARK 500 OD2 ASP D 288 O HOH D 503 2.18 REMARK 500 OD2 ASP D 349 O HOH D 504 2.18 REMARK 500 O HOH D 580 O HOH D 597 2.19 REMARK 500 O HOH D 566 O HOH D 597 2.19 REMARK 500 O HOH A 522 O HOH A 623 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 619 O HOH D 582 1566 1.86 REMARK 500 O HOH C 508 O HOH D 587 1455 2.02 REMARK 500 OE1 GLU D 346 NZ LYS D 403 1455 2.04 REMARK 500 O HOH A 623 O HOH B 517 1655 2.08 REMARK 500 O HOH B 654 O HOH B 683 1455 2.14 REMARK 500 O HOH A 623 O HOH B 528 1655 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU C 309 CD GLU C 309 OE1 -0.114 REMARK 500 GLU C 309 CD GLU C 309 OE2 -0.090 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LYS A 394 CA - CB - CG ANGL. DEV. = 19.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL DBREF 6AO3 A 277 487 UNP Q9D8T2 GSDMD_MOUSE 277 487 DBREF 6AO3 B 277 487 UNP Q9D8T2 GSDMD_MOUSE 277 487 DBREF 6AO3 C 277 487 UNP Q9D8T2 GSDMD_MOUSE 277 487 DBREF 6AO3 D 277 487 UNP Q9D8T2 GSDMD_MOUSE 277 487 SEQADV 6AO3 SER A 276 UNP Q9D8T2 EXPRESSION TAG SEQADV 6AO3 SER B 276 UNP Q9D8T2 EXPRESSION TAG SEQADV 6AO3 SER C 276 UNP Q9D8T2 EXPRESSION TAG SEQADV 6AO3 SER D 276 UNP Q9D8T2 EXPRESSION TAG SEQRES 1 A 212 SER GLY ILE ASP GLU GLU GLU LEU ILE GLU ALA ALA ASP SEQRES 2 A 212 PHE GLN GLY LEU TYR ALA GLU VAL LYS ALA CYS SER SER SEQRES 3 A 212 GLU LEU GLU SER LEU GLU MET GLU LEU ARG GLN GLN ILE SEQRES 4 A 212 LEU VAL ASN ILE GLY LYS ILE LEU GLN ASP GLN PRO SER SEQRES 5 A 212 MET GLU ALA LEU GLU ALA SER LEU GLY GLN GLY LEU CYS SEQRES 6 A 212 SER GLY GLY GLN VAL GLU PRO LEU ASP GLY PRO ALA GLY SEQRES 7 A 212 CYS ILE LEU GLU CYS LEU VAL LEU ASP SER GLY GLU LEU SEQRES 8 A 212 VAL PRO GLU LEU ALA ALA PRO ILE PHE TYR LEU LEU GLY SEQRES 9 A 212 ALA LEU ALA VAL LEU SER GLU THR GLN GLN GLN LEU LEU SEQRES 10 A 212 ALA LYS ALA LEU GLU THR THR VAL LEU SER LYS GLN LEU SEQRES 11 A 212 GLU LEU VAL LYS HIS VAL LEU GLU GLN SER THR PRO TRP SEQRES 12 A 212 GLN GLU GLN SER SER VAL SER LEU PRO THR VAL LEU LEU SEQRES 13 A 212 GLY ASP CYS TRP ASP GLU LYS ASN PRO THR TRP VAL LEU SEQRES 14 A 212 LEU GLU GLU CYS GLY LEU ARG LEU GLN VAL GLU SER PRO SEQRES 15 A 212 GLN VAL HIS TRP GLU PRO THR SER LEU ILE PRO THR SER SEQRES 16 A 212 ALA LEU TYR ALA SER LEU PHE LEU LEU SER SER LEU GLY SEQRES 17 A 212 GLN LYS PRO CYS SEQRES 1 B 212 SER GLY ILE ASP GLU GLU GLU LEU ILE GLU ALA ALA ASP SEQRES 2 B 212 PHE GLN GLY LEU TYR ALA GLU VAL LYS ALA CYS SER SER SEQRES 3 B 212 GLU LEU GLU SER LEU GLU MET GLU LEU ARG GLN GLN ILE SEQRES 4 B 212 LEU VAL ASN ILE GLY LYS ILE LEU GLN ASP GLN PRO SER SEQRES 5 B 212 MET GLU ALA LEU GLU ALA SER LEU GLY GLN GLY LEU CYS SEQRES 6 B 212 SER GLY GLY GLN VAL GLU PRO LEU ASP GLY PRO ALA GLY SEQRES 7 B 212 CYS ILE LEU GLU CYS LEU VAL LEU ASP SER GLY GLU LEU SEQRES 8 B 212 VAL PRO GLU LEU ALA ALA PRO ILE PHE TYR LEU LEU GLY SEQRES 9 B 212 ALA LEU ALA VAL LEU SER GLU THR GLN GLN GLN LEU LEU SEQRES 10 B 212 ALA LYS ALA LEU GLU THR THR VAL LEU SER LYS GLN LEU SEQRES 11 B 212 GLU LEU VAL LYS HIS VAL LEU GLU GLN SER THR PRO TRP SEQRES 12 B 212 GLN GLU GLN SER SER VAL SER LEU PRO THR VAL LEU LEU SEQRES 13 B 212 GLY ASP CYS TRP ASP GLU LYS ASN PRO THR TRP VAL LEU SEQRES 14 B 212 LEU GLU GLU CYS GLY LEU ARG LEU GLN VAL GLU SER PRO SEQRES 15 B 212 GLN VAL HIS TRP GLU PRO THR SER LEU ILE PRO THR SER SEQRES 16 B 212 ALA LEU TYR ALA SER LEU PHE LEU LEU SER SER LEU GLY SEQRES 17 B 212 GLN LYS PRO CYS SEQRES 1 C 212 SER GLY ILE ASP GLU GLU GLU LEU ILE GLU ALA ALA ASP SEQRES 2 C 212 PHE GLN GLY LEU TYR ALA GLU VAL LYS ALA CYS SER SER SEQRES 3 C 212 GLU LEU GLU SER LEU GLU MET GLU LEU ARG GLN GLN ILE SEQRES 4 C 212 LEU VAL ASN ILE GLY LYS ILE LEU GLN ASP GLN PRO SER SEQRES 5 C 212 MET GLU ALA LEU GLU ALA SER LEU GLY GLN GLY LEU CYS SEQRES 6 C 212 SER GLY GLY GLN VAL GLU PRO LEU ASP GLY PRO ALA GLY SEQRES 7 C 212 CYS ILE LEU GLU CYS LEU VAL LEU ASP SER GLY GLU LEU SEQRES 8 C 212 VAL PRO GLU LEU ALA ALA PRO ILE PHE TYR LEU LEU GLY SEQRES 9 C 212 ALA LEU ALA VAL LEU SER GLU THR GLN GLN GLN LEU LEU SEQRES 10 C 212 ALA LYS ALA LEU GLU THR THR VAL LEU SER LYS GLN LEU SEQRES 11 C 212 GLU LEU VAL LYS HIS VAL LEU GLU GLN SER THR PRO TRP SEQRES 12 C 212 GLN GLU GLN SER SER VAL SER LEU PRO THR VAL LEU LEU SEQRES 13 C 212 GLY ASP CYS TRP ASP GLU LYS ASN PRO THR TRP VAL LEU SEQRES 14 C 212 LEU GLU GLU CYS GLY LEU ARG LEU GLN VAL GLU SER PRO SEQRES 15 C 212 GLN VAL HIS TRP GLU PRO THR SER LEU ILE PRO THR SER SEQRES 16 C 212 ALA LEU TYR ALA SER LEU PHE LEU LEU SER SER LEU GLY SEQRES 17 C 212 GLN LYS PRO CYS SEQRES 1 D 212 SER GLY ILE ASP GLU GLU GLU LEU ILE GLU ALA ALA ASP SEQRES 2 D 212 PHE GLN GLY LEU TYR ALA GLU VAL LYS ALA CYS SER SER SEQRES 3 D 212 GLU LEU GLU SER LEU GLU MET GLU LEU ARG GLN GLN ILE SEQRES 4 D 212 LEU VAL ASN ILE GLY LYS ILE LEU GLN ASP GLN PRO SER SEQRES 5 D 212 MET GLU ALA LEU GLU ALA SER LEU GLY GLN GLY LEU CYS SEQRES 6 D 212 SER GLY GLY GLN VAL GLU PRO LEU ASP GLY PRO ALA GLY SEQRES 7 D 212 CYS ILE LEU GLU CYS LEU VAL LEU ASP SER GLY GLU LEU SEQRES 8 D 212 VAL PRO GLU LEU ALA ALA PRO ILE PHE TYR LEU LEU GLY SEQRES 9 D 212 ALA LEU ALA VAL LEU SER GLU THR GLN GLN GLN LEU LEU SEQRES 10 D 212 ALA LYS ALA LEU GLU THR THR VAL LEU SER LYS GLN LEU SEQRES 11 D 212 GLU LEU VAL LYS HIS VAL LEU GLU GLN SER THR PRO TRP SEQRES 12 D 212 GLN GLU GLN SER SER VAL SER LEU PRO THR VAL LEU LEU SEQRES 13 D 212 GLY ASP CYS TRP ASP GLU LYS ASN PRO THR TRP VAL LEU SEQRES 14 D 212 LEU GLU GLU CYS GLY LEU ARG LEU GLN VAL GLU SER PRO SEQRES 15 D 212 GLN VAL HIS TRP GLU PRO THR SER LEU ILE PRO THR SER SEQRES 16 D 212 ALA LEU TYR ALA SER LEU PHE LEU LEU SER SER LEU GLY SEQRES 17 D 212 GLN LYS PRO CYS FORMUL 5 HOH *586(H2 O) HELIX 1 AA1 ASP A 288 SER A 305 1 18 HELIX 2 AA2 GLU A 307 LEU A 322 1 16 HELIX 3 AA3 ASP A 324 GLY A 342 1 19 HELIX 4 AA4 ASP A 349 GLU A 357 1 9 HELIX 5 AA5 CYS A 358 VAL A 360 5 3 HELIX 6 AA6 VAL A 367 LEU A 384 1 18 HELIX 7 AA7 SER A 385 GLU A 397 1 13 HELIX 8 AA8 THR A 399 SER A 415 1 17 HELIX 9 AA9 PRO A 427 GLY A 432 5 6 HELIX 10 AB1 ASN A 439 GLU A 447 1 9 HELIX 11 AB2 GLU A 462 THR A 464 5 3 HELIX 12 AB3 SER A 465 GLY A 483 1 19 HELIX 13 AB4 ASP B 288 SER B 305 1 18 HELIX 14 AB5 GLU B 307 LEU B 322 1 16 HELIX 15 AB6 ASP B 324 GLY B 342 1 19 HELIX 16 AB7 ASP B 349 GLU B 357 1 9 HELIX 17 AB8 VAL B 367 LEU B 384 1 18 HELIX 18 AB9 SER B 385 LEU B 396 1 12 HELIX 19 AC1 THR B 399 SER B 415 1 17 HELIX 20 AC2 PRO B 427 GLY B 432 5 6 HELIX 21 AC3 ASN B 439 GLU B 447 1 9 HELIX 22 AC4 GLU B 462 THR B 464 5 3 HELIX 23 AC5 SER B 465 GLY B 483 1 19 HELIX 24 AC6 ASP C 288 SER C 305 1 18 HELIX 25 AC7 GLU C 307 LEU C 322 1 16 HELIX 26 AC8 ASP C 324 GLY C 342 1 19 HELIX 27 AC9 ASP C 349 CYS C 358 1 10 HELIX 28 AD1 VAL C 367 LEU C 384 1 18 HELIX 29 AD2 SER C 385 LEU C 396 1 12 HELIX 30 AD3 THR C 399 SER C 415 1 17 HELIX 31 AD4 PRO C 427 GLY C 432 5 6 HELIX 32 AD5 ASN C 439 GLU C 447 1 9 HELIX 33 AD6 GLU C 462 THR C 464 5 3 HELIX 34 AD7 SER C 465 GLY C 483 1 19 HELIX 35 AD8 ASP D 288 SER D 305 1 18 HELIX 36 AD9 GLU D 307 LEU D 322 1 16 HELIX 37 AE1 ASP D 324 GLY D 342 1 19 HELIX 38 AE2 ASP D 349 CYS D 358 1 10 HELIX 39 AE3 VAL D 367 LEU D 384 1 18 HELIX 40 AE4 SER D 385 GLU D 397 1 13 HELIX 41 AE5 THR D 399 SER D 415 1 17 HELIX 42 AE6 PRO D 427 GLY D 432 5 6 HELIX 43 AE7 ASN D 439 GLU D 447 1 9 HELIX 44 AE8 GLU D 462 THR D 464 5 3 HELIX 45 AE9 SER D 465 GLY D 483 1 19 SHEET 1 AA1 3 SER A 422 VAL A 424 0 SHEET 2 AA1 3 VAL A 459 TRP A 461 -1 O TRP A 461 N SER A 422 SHEET 3 AA1 3 ARG A 451 LEU A 452 -1 N ARG A 451 O HIS A 460 SHEET 1 AA2 3 SER B 422 VAL B 424 0 SHEET 2 AA2 3 VAL B 459 TRP B 461 -1 O TRP B 461 N SER B 422 SHEET 3 AA2 3 ARG B 451 LEU B 452 -1 N ARG B 451 O HIS B 460 SHEET 1 AA3 3 SER C 422 VAL C 424 0 SHEET 2 AA3 3 VAL C 459 TRP C 461 -1 O VAL C 459 N VAL C 424 SHEET 3 AA3 3 ARG C 451 LEU C 452 -1 N ARG C 451 O HIS C 460 SHEET 1 AA4 3 SER D 422 VAL D 424 0 SHEET 2 AA4 3 VAL D 459 TRP D 461 -1 O VAL D 459 N VAL D 424 SHEET 3 AA4 3 ARG D 451 LEU D 452 -1 N ARG D 451 O HIS D 460 CISPEP 1 THR A 416 PRO A 417 0 0.24 CISPEP 2 SER A 456 PRO A 457 0 -2.17 CISPEP 3 THR B 416 PRO B 417 0 -0.18 CISPEP 4 SER B 456 PRO B 457 0 -2.31 CISPEP 5 THR C 416 PRO C 417 0 -2.09 CISPEP 6 SER C 456 PRO C 457 0 -3.31 CISPEP 7 THR D 416 PRO D 417 0 -1.41 CISPEP 8 SER D 456 PRO D 457 0 -0.99 CRYST1 45.300 56.840 81.840 94.86 102.79 98.99 P 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.022075 0.003493 0.005487 0.00000 SCALE2 0.000000 0.017812 0.002222 0.00000 SCALE3 0.000000 0.000000 0.012627 0.00000