HEADER TOXIN 20-AUG-17 6AQK TITLE CRYSTAL STRUCTURE OF THE C-TERMINAL TOXIN DOMAIN OF RHS2 FROM YERSINIA TITLE 2 ENTOMOPHAGA COMPND MOL_ID: 1; COMPND 2 MOLECULE: TOXIN PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 738-963; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: YERSINIA ENTOMOPHAGA; SOURCE 3 ORGANISM_TAXID: 935293; SOURCE 4 GENE: RHS2; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: LOBSTR(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PDEST17 KEYWDS ADP-RIBOSYLATION, ADP-RIBOSYLTRANSFERASE, TOXIN EXPDTA X-RAY DIFFRACTION AUTHOR J.N.BUSBY,M.R.H.HURST,J.S.LOTT REVDAT 2 13-MAR-24 6AQK 1 REMARK REVDAT 1 22-AUG-18 6AQK 0 JRNL AUTH J.N.BUSBY,M.R.H.HURST,J.S.LOTT JRNL TITL CRYSTAL STRUCTURE OF THE C-TERMINAL TOXIN DOMAIN OF RHS2 JRNL TITL 2 FROM YERSINIA ENTOMOPHAGA JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0158 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.41 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 18821 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.183 REMARK 3 R VALUE (WORKING SET) : 0.181 REMARK 3 FREE R VALUE : 0.226 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 995 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.85 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1330 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.49 REMARK 3 BIN R VALUE (WORKING SET) : 0.3030 REMARK 3 BIN FREE R VALUE SET COUNT : 67 REMARK 3 BIN FREE R VALUE : 0.2880 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1704 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 16 REMARK 3 SOLVENT ATOMS : 77 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 42.03 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 38.57 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.22000 REMARK 3 B22 (A**2) : -2.00000 REMARK 3 B33 (A**2) : 2.22000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.131 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.128 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.108 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.682 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.971 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.960 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1758 ; 0.018 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 1542 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2383 ; 1.824 ; 1.945 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3598 ; 1.020 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 217 ; 6.714 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 81 ;35.286 ;24.568 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 292 ;13.476 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 6 ;12.540 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 249 ; 0.116 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1964 ; 0.010 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 358 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 6AQK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-AUG-17. REMARK 100 THE DEPOSITION ID IS D_1000229677. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-AUG-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.07219 REMARK 200 MONOCHROMATOR : SILICON DOUBLE CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : AIMLESS 0.5.32 REMARK 200 DATA SCALING SOFTWARE : XSCALE JUN 1, 2017 REMARK 200 BUILT=20170720 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18821 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 50.410 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 13.52 REMARK 200 R MERGE (I) : 0.10700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.9200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.85 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.7 REMARK 200 DATA REDUNDANCY IN SHELL : 9.69 REMARK 200 R MERGE FOR SHELL (I) : 2.09500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXDE 2016/1, DM 7.0.044 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: PLATE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 37.81 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.98 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 29% PEG 2000 MME, 0.15 M KBR, PH 7.5, REMARK 280 VAPOR DIFFUSION, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 18.75500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 50.41000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 27.26000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 50.41000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 18.75500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 27.26000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 736 REMARK 465 SER A 737 REMARK 465 GLY A 738 REMARK 465 ALA A 739 REMARK 465 ASN A 740 REMARK 465 GLY A 741 REMARK 465 ALA A 742 REMARK 465 LYS A 743 REMARK 465 LYS A 744 REMARK 465 ASN A 745 REMARK 465 TRP A 746 REMARK 465 VAL A 747 REMARK 465 ILE A 748 REMARK 465 SER A 965 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 749 CG CD CE NZ REMARK 470 LYS A 756 CE NZ REMARK 470 LYS A 801 CG CD CE NZ REMARK 470 ARG A 805 CG CD NE CZ NH1 NH2 REMARK 470 ASP A 806 CG OD1 OD2 REMARK 470 LYS A 817 CD CE NZ REMARK 470 GLU A 947 CG CD OE1 OE2 REMARK 470 ARG A 964 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 782 61.30 -119.58 REMARK 500 ASP A 806 55.97 -90.01 REMARK 500 GLU A 860 125.25 -29.70 REMARK 500 ASP A 871 52.73 -147.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 PT A1003 PT REMARK 620 N RES CSSEQI ATOM REMARK 620 1 MET A 786 SD REMARK 620 2 HIS A 809 ND1 110.2 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PT A 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PT A 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PT A 1003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PT A 1004 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PT A 1005 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PT A 1006 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 1007 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 1008 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 1009 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 1010 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 1011 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 1012 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 1013 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 1014 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 1015 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BR A 1016 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5KIS RELATED DB: PDB REMARK 900 5KIS CONTAINS THE ENTIRE YENB/RHS2 COMPLEX BUT THE RHS2-CTD DOMAIN REMARK 900 IS DISORDERED REMARK 999 REMARK 999 SEQUENCE REMARK 999 FIRST 4 N-TERMINAL RESIDUES GSGA ARE FROM A PURIFICATION TAG DBREF 6AQK A 736 965 PDB 6AQK 6AQK 736 965 SEQRES 1 A 230 GLY SER GLY ALA ASN GLY ALA LYS LYS ASN TRP VAL ILE SEQRES 2 A 230 LYS GLU ASP PRO ALA LEU TYR LYS GLN GLN GLY GLY GLU SEQRES 3 A 230 TYR PRO TYR TYR SER SER PHE THR ILE ALA LEU GLN LYS SEQRES 4 A 230 LEU ASN ILE SER HIS TYR ASP SER ILE ILE ASP MET ASP SEQRES 5 A 230 ASN PHE ILE SER LYS TRP ALA GLU ILE GLY ARG ASN MET SEQRES 6 A 230 LYS PRO ALA ALA ARG ASP ILE SER HIS ASP LYS PHE ILE SEQRES 7 A 230 GLU VAL GLN LYS THR LEU GLY LYS ILE ASP ALA GLU TRP SEQRES 8 A 230 SER GLY TYR HIS SER ALA ASP VAL ASN GLU THR PHE ARG SEQRES 9 A 230 GLY ASP THR PRO VAL ILE SER ASN SER TYR SER TRP LEU SEQRES 10 A 230 ALA GLU PHE ILE ASN GLU SER GLU GLY LYS SER ASP THR SEQRES 11 A 230 VAL GLN LYS SER MET ASP LEU GLU ILE LYS SER PRO LEU SEQRES 12 A 230 ILE MET SER THR ALA LYS ASP PRO LYS MET GLY TYR VAL SEQRES 13 A 230 SER GLY LYS THR ILE MET TRP HIS PHE ASP LEU GLU PRO SEQRES 14 A 230 GLY HIS ALA GLY VAL SER GLU GLY LEU TYR ALA SER GLU SEQRES 15 A 230 GLY GLU VAL THR PHE PRO LEU TYR ASN ARG MET LYS ILE SEQRES 16 A 230 THR SER LEU GLN TYR LEU PRO GLU GLY ARG SER TYR MET SEQRES 17 A 230 ASP ASN PRO GLU GLN TYR GLY THR SER HIS ARG TYR ILE SEQRES 18 A 230 ILE LYS ALA ARG MET LEU PRO ARG SER HET PT A1001 1 HET PT A1002 1 HET PT A1003 1 HET PT A1004 1 HET PT A1005 1 HET PT A1006 1 HET CL A1007 1 HET CL A1008 1 HET CL A1009 1 HET CL A1010 1 HET CL A1011 1 HET CL A1012 1 HET CL A1013 1 HET CL A1014 1 HET CL A1015 1 HET BR A1016 1 HETNAM PT PLATINUM (II) ION HETNAM CL CHLORIDE ION HETNAM BR BROMIDE ION FORMUL 2 PT 6(PT 2+) FORMUL 8 CL 9(CL 1-) FORMUL 17 BR BR 1- FORMUL 18 HOH *77(H2 O) HELIX 1 AA1 ALA A 753 GLY A 759 1 7 HELIX 2 AA2 GLU A 761 LEU A 775 1 15 HELIX 3 AA3 ASP A 785 ASN A 799 1 15 HELIX 4 AA4 SER A 808 TRP A 826 1 19 HELIX 5 AA5 SER A 827 TYR A 829 5 3 HELIX 6 AA6 THR A 842 SER A 848 5 7 HELIX 7 AA7 TYR A 849 GLU A 860 1 12 HELIX 8 AA8 MET A 888 GLY A 893 1 6 HELIX 9 AA9 TYR A 914 GLU A 917 5 4 HELIX 10 AB1 SER A 941 ASP A 944 5 4 HELIX 11 AB2 ASN A 945 GLY A 950 1 6 SHEET 1 AA1 5 GLU A 836 ASP A 841 0 SHEET 2 AA1 5 ILE A 896 LEU A 902 -1 O TRP A 898 N ARG A 839 SHEET 3 AA1 5 TYR A 955 MET A 961 1 O MET A 961 N ASP A 901 SHEET 4 AA1 5 ARG A 927 TYR A 935 -1 N SER A 932 O LYS A 958 SHEET 5 AA1 5 VAL A 866 LYS A 875 -1 N LEU A 872 O ILE A 930 SHEET 1 AA2 2 MET A 880 ALA A 883 0 SHEET 2 AA2 2 GLU A 919 PHE A 922 -1 O VAL A 920 N THR A 882 LINK SD MET A 786 PT PT A1003 1555 1555 2.15 LINK SD MET A 800 PT PT A1001 1555 1555 2.41 LINK ND1 HIS A 809 PT PT A1003 1555 1555 2.38 LINK SD MET A 870 PT PT A1002 1555 1555 2.07 LINK SD MET A 888 PT PT A1004 1555 1555 2.68 LINK SD MET A 943 PT PT A1006 1555 1555 2.10 CISPEP 1 LYS A 801 PRO A 802 0 -7.63 SITE 1 AC1 4 MET A 800 CL A1007 CL A1008 CL A1009 SITE 1 AC2 2 MET A 870 CL A1010 SITE 1 AC3 2 MET A 786 HIS A 809 SITE 1 AC4 5 ASP A 885 MET A 888 CL A1011 CL A1012 SITE 2 AC4 5 CL A1013 SITE 1 AC5 1 MET A 888 SITE 1 AC6 3 MET A 943 CL A1014 CL A1015 SITE 1 AC7 4 SER A 766 MET A 800 PT A1001 CL A1008 SITE 1 AC8 3 PT A1001 CL A1007 CL A1009 SITE 1 AC9 3 MET A 800 PT A1001 CL A1008 SITE 1 AD1 2 ALA A 824 PT A1002 SITE 1 AD2 7 ALA A 883 LYS A 884 ASP A 885 MET A 888 SITE 2 AD2 7 GLY A 918 PT A1004 CL A1012 SITE 1 AD3 4 ASN A 799 PT A1004 CL A1011 CL A1013 SITE 1 AD4 4 GLU A 795 MET A 888 PT A1004 CL A1012 SITE 1 AD5 2 ASN A 945 PT A1006 SITE 1 AD6 3 HIS A 809 TYR A 949 PT A1006 SITE 1 AD7 3 GLN A 757 THR A 769 ILE A 879 CRYST1 37.510 54.520 100.820 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.026660 0.000000 0.000000 0.00000 SCALE2 0.000000 0.018342 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009919 0.00000