data_6ASD # _entry.id 6ASD # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6ASD pdb_00006asd 10.2210/pdb6asd/pdb WWPDB D_1000229396 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6ASD _pdbx_database_status.recvd_initial_deposition_date 2017-08-24 _pdbx_database_status.SG_entry Y _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Liu, K.' 1 ? 'Xu, C.' 2 ? 'Tempel, W.' 3 ? 'Walker, J.R.' 4 ? 'Arrowsmith, C.H.' 5 ? 'Bountra, C.' 6 ? 'Edwards, A.M.' 7 ? 'Min, J.' 8 ? 'Structural Genomics Consortium (SGC)' 9 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Structure _citation.journal_id_ASTM STRUE6 _citation.journal_id_CSD 2005 _citation.journal_id_ISSN 1878-4186 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 26 _citation.language ? _citation.page_first 85 _citation.page_last 95.e3 _citation.title 'DNA Sequence Recognition of Human CXXC Domains and Their Structural Determinants.' _citation.year 2018 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1016/j.str.2017.11.022 _citation.pdbx_database_id_PubMed 29276034 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Xu, C.' 1 ? primary 'Liu, K.' 2 ? primary 'Lei, M.' 3 ? primary 'Yang, A.' 4 ? primary 'Li, Y.' 5 ? primary 'Hughes, T.R.' 6 ? primary 'Min, J.' 7 ? # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 121.820 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 6ASD _cell.details ? _cell.formula_units_Z ? _cell.length_a 73.502 _cell.length_a_esd ? _cell.length_b 31.951 _cell.length_b_esd ? _cell.length_c 65.414 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6ASD _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*GP*CP*CP*AP*CP*CP*GP*GP*TP*GP*GP*C)-3') ; 3664.380 2 ? ? ? ? 2 polymer man 'Methylcytosine dioxygenase TET1' 5504.574 1 1.14.11.- ? 'Zinc finger region (UNP residues 587-632)' ? 3 non-polymer syn 'UNKNOWN ATOM OR ION' ? 17 ? ? ? ? 4 non-polymer syn 'ZINC ION' 65.409 2 ? ? ? ? 5 water nat water 18.015 58 ? ? ? ? # _entity_name_com.entity_id 2 _entity_name_com.name 'CXXC-type zinc finger protein 6,Leukemia-associated protein with a CXXC domain,Ten-eleven translocation 1 gene protein' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no '(DG)(DC)(DC)(DA)(DC)(DC)(DG)(DG)(DT)(DG)(DG)(DC)' GCCACCGGTGGC A,B ? 2 'polypeptide(L)' no no GKRKRCGVCEPCQQKTNCGECTYCKNRKNSHQICKKRKCEELKKKPS GKRKRCGVCEPCQQKTNCGECTYCKNRKNSHQICKKRKCEELKKKPS C ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DG n 1 2 DC n 1 3 DC n 1 4 DA n 1 5 DC n 1 6 DC n 1 7 DG n 1 8 DG n 1 9 DT n 1 10 DG n 1 11 DG n 1 12 DC n 2 1 GLY n 2 2 LYS n 2 3 ARG n 2 4 LYS n 2 5 ARG n 2 6 CYS n 2 7 GLY n 2 8 VAL n 2 9 CYS n 2 10 GLU n 2 11 PRO n 2 12 CYS n 2 13 GLN n 2 14 GLN n 2 15 LYS n 2 16 THR n 2 17 ASN n 2 18 CYS n 2 19 GLY n 2 20 GLU n 2 21 CYS n 2 22 THR n 2 23 TYR n 2 24 CYS n 2 25 LYS n 2 26 ASN n 2 27 ARG n 2 28 LYS n 2 29 ASN n 2 30 SER n 2 31 HIS n 2 32 GLN n 2 33 ILE n 2 34 CYS n 2 35 LYS n 2 36 LYS n 2 37 ARG n 2 38 LYS n 2 39 CYS n 2 40 GLU n 2 41 GLU n 2 42 LEU n 2 43 LYS n 2 44 LYS n 2 45 LYS n 2 46 PRO n 2 47 SER n # _entity_src_gen.entity_id 2 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 47 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'TET1, CXXC6, KIAA1676, LCX' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)-V2R-pRARE2' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET28-MHL _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 12 _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details synthetic # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 PDB 6ASD 6ASD ? 1 ? 1 2 UNP TET1_HUMAN Q8NFU7 ? 2 KRKRCGVCEPCQQKTNCGECTYCKNRKNSHQICKKRKCEELKKKPS 587 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 6ASD A 1 ? 12 ? 6ASD 1 ? 12 ? 1 12 2 1 6ASD B 1 ? 12 ? 6ASD 1 ? 12 ? 1 12 3 2 6ASD C 2 ? 47 ? Q8NFU7 587 ? 632 ? 587 632 # _struct_ref_seq_dif.align_id 3 _struct_ref_seq_dif.pdbx_pdb_id_code 6ASD _struct_ref_seq_dif.mon_id GLY _struct_ref_seq_dif.pdbx_pdb_strand_id C _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code Q8NFU7 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'expression tag' _struct_ref_seq_dif.pdbx_auth_seq_num 586 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 UNX non-polymer . 'UNKNOWN ATOM OR ION' ? ? ? VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6ASD _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.6 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 52.2 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '25% PEG-3350, 0.2 M ammonium acetate, 0.1 M HEPES' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2013-06-20 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97918 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 19-ID' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.97918 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 19-ID _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 6ASD _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.850 _reflns.d_resolution_low 36.720 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 11082 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 98.300 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 3.600 _reflns.pdbx_Rmerge_I_obs 0.038 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 22.100 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects 2 _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.044 _reflns.pdbx_Rpim_I_all 0.023 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all 40255 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 1.000 _reflns.pdbx_R_split ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_R_split 1.850 1.890 ? ? 2575 ? ? 676 ? 95.700 ? ? ? ? 0.423 ? ? ? ? ? ? ? ? 3.800 ? ? ? 3.200 0.494 0.252 ? 1 1 0.872 ? 9.060 36.720 ? ? 304 ? ? 102 ? 91.500 ? ? ? ? 0.029 ? ? ? ? ? ? ? ? 3.000 ? ? ? 53.800 0.035 0.019 ? 2 1 0.998 ? # _refine.aniso_B[1][1] -1.0900 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.3000 _refine.aniso_B[2][2] 0.3700 _refine.aniso_B[2][3] 0.0000 _refine.aniso_B[3][3] 0.1900 _refine.B_iso_max 62.800 _refine.B_iso_mean 36.2260 _refine.B_iso_min 22.320 _refine.correlation_coeff_Fo_to_Fc 0.9600 _refine.correlation_coeff_Fo_to_Fc_free 0.9500 _refine.details 'coot was used for interactive model building. Model geometry was assessed on the molprobity server.' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6ASD _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.8500 _refine.ls_d_res_low 36.7200 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 10543 _refine.ls_number_reflns_R_free 539 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 98.1300 _refine.ls_percent_reflns_R_free 4.9000 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2033 _refine.ls_R_factor_R_free 0.2350 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2016 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 'PDB entry 4hp3' _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.1400 _refine.pdbx_overall_ESU_R_Free 0.1310 _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 5.5800 _refine.overall_SU_ML 0.0950 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.cycle_id final _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.d_res_high 1.8500 _refine_hist.d_res_low 36.7200 _refine_hist.pdbx_number_atoms_ligand 19 _refine_hist.number_atoms_solvent 58 _refine_hist.number_atoms_total 911 _refine_hist.pdbx_number_residues_total 69 _refine_hist.pdbx_B_iso_mean_ligand 35.78 _refine_hist.pdbx_B_iso_mean_solvent 39.37 _refine_hist.pdbx_number_atoms_protein 348 _refine_hist.pdbx_number_atoms_nucleic_acid 486 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.013 0.014 913 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.004 0.020 619 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.455 1.460 1322 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 1.336 3.011 1447 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 4.799 5.000 48 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 44.548 23.333 15 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 12.492 15.000 84 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 6.978 15.000 4 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.075 0.200 122 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.012 0.020 685 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.002 0.020 199 ? r_gen_planes_other ? ? 'X-RAY DIFFRACTION' ? 1.188 2.210 182 ? r_mcbond_it ? ? 'X-RAY DIFFRACTION' ? 1.187 2.207 181 ? r_mcbond_other ? ? 'X-RAY DIFFRACTION' ? 1.740 3.305 227 ? r_mcangle_it ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 1.8500 _refine_ls_shell.d_res_low 1.8980 _refine_ls_shell.number_reflns_all 809 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 44 _refine_ls_shell.number_reflns_R_work 765 _refine_ls_shell.percent_reflns_obs 96.2000 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.3120 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.2410 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 6ASD _struct.title 'Zinc finger region of human TET1 in complex with CpG DNA' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6ASD _struct_keywords.text 'zinc finger, dna-binding, Structural Genomics, Structural Genomics Consortium, SGC, DNA BINDING PROTEIN-DNA complex' _struct_keywords.pdbx_keywords 'DNA BINDING PROTEIN/DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 3 ? F N N 3 ? G N N 3 ? H N N 3 ? I N N 3 ? J N N 3 ? K N N 3 ? L N N 3 ? M N N 4 ? N N N 4 ? O N N 3 ? P N N 3 ? Q N N 3 ? R N N 3 ? S N N 3 ? T N N 3 ? U N N 3 ? V N N 3 ? W N N 5 ? X N N 5 ? Y N N 5 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 CYS C 9 ? GLN C 14 ? CYS C 594 GLN C 599 1 ? 6 HELX_P HELX_P2 AA2 CYS C 21 ? ASN C 26 ? CYS C 606 ASN C 611 1 ? 6 HELX_P HELX_P3 AA3 CYS C 39 ? LYS C 44 ? CYS C 624 LYS C 629 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? C CYS 6 SG ? ? ? 1_555 M ZN . ZN ? ? C CYS 591 C ZN 701 1_555 ? ? ? ? ? ? ? 2.294 ? ? metalc2 metalc ? ? C CYS 9 SG ? ? ? 1_555 M ZN . ZN ? ? C CYS 594 C ZN 701 1_555 ? ? ? ? ? ? ? 2.151 ? ? metalc3 metalc ? ? C CYS 12 SG ? ? ? 1_555 M ZN . ZN ? ? C CYS 597 C ZN 701 1_555 ? ? ? ? ? ? ? 2.291 ? ? metalc4 metalc ? ? C CYS 18 SG ? ? ? 1_555 N ZN . ZN ? ? C CYS 603 C ZN 702 1_555 ? ? ? ? ? ? ? 2.306 ? ? metalc5 metalc ? ? C CYS 21 SG ? ? ? 1_555 N ZN . ZN ? ? C CYS 606 C ZN 702 1_555 ? ? ? ? ? ? ? 2.377 ? ? metalc6 metalc ? ? C CYS 24 SG ? ? ? 1_555 N ZN . ZN ? ? C CYS 609 C ZN 702 1_555 ? ? ? ? ? ? ? 2.332 ? ? metalc7 metalc ? ? C CYS 34 SG ? ? ? 1_555 N ZN . ZN ? ? C CYS 619 C ZN 702 1_555 ? ? ? ? ? ? ? 2.362 ? ? metalc8 metalc ? ? C CYS 39 SG ? ? ? 1_555 M ZN . ZN ? ? C CYS 624 C ZN 701 1_555 ? ? ? ? ? ? ? 2.284 ? ? hydrog1 hydrog ? ? A DG 1 N1 ? ? ? 1_555 B DC 12 N3 ? ? A DG 1 B DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DG 1 N2 ? ? ? 1_555 B DC 12 O2 ? ? A DG 1 B DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DG 1 O6 ? ? ? 1_555 B DC 12 N4 ? ? A DG 1 B DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DC 2 N3 ? ? ? 1_555 B DG 11 N1 ? ? A DC 2 B DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DC 2 N4 ? ? ? 1_555 B DG 11 O6 ? ? A DC 2 B DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DC 2 O2 ? ? ? 1_555 B DG 11 N2 ? ? A DC 2 B DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DC 3 N3 ? ? ? 1_555 B DG 10 N1 ? ? A DC 3 B DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DC 3 N4 ? ? ? 1_555 B DG 10 O6 ? ? A DC 3 B DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DC 3 O2 ? ? ? 1_555 B DG 10 N2 ? ? A DC 3 B DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DA 4 N1 ? ? ? 1_555 B DT 9 N3 ? ? A DA 4 B DT 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DA 4 N6 ? ? ? 1_555 B DT 9 O4 ? ? A DA 4 B DT 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DC 5 N3 ? ? ? 1_555 B DG 8 N1 ? ? A DC 5 B DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DC 5 N4 ? ? ? 1_555 B DG 8 O6 ? ? A DC 5 B DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DC 5 O2 ? ? ? 1_555 B DG 8 N2 ? ? A DC 5 B DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DC 6 N3 ? ? ? 1_555 B DG 7 N1 ? ? A DC 6 B DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DC 6 N4 ? ? ? 1_555 B DG 7 O6 ? ? A DC 6 B DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DC 6 O2 ? ? ? 1_555 B DG 7 N2 ? ? A DC 6 B DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DG 7 N1 ? ? ? 1_555 B DC 6 N3 ? ? A DG 7 B DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DG 7 N2 ? ? ? 1_555 B DC 6 O2 ? ? A DG 7 B DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DG 7 O6 ? ? ? 1_555 B DC 6 N4 ? ? A DG 7 B DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DG 8 N1 ? ? ? 1_555 B DC 5 N3 ? ? A DG 8 B DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DG 8 N2 ? ? ? 1_555 B DC 5 O2 ? ? A DG 8 B DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DG 8 O6 ? ? ? 1_555 B DC 5 N4 ? ? A DG 8 B DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DT 9 N3 ? ? ? 1_555 B DA 4 N1 ? ? A DT 9 B DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DT 9 O4 ? ? ? 1_555 B DA 4 N6 ? ? A DT 9 B DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DG 10 N1 ? ? ? 1_555 B DC 3 N3 ? ? A DG 10 B DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A DG 10 N2 ? ? ? 1_555 B DC 3 O2 ? ? A DG 10 B DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A DG 10 O6 ? ? ? 1_555 B DC 3 N4 ? ? A DG 10 B DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A DG 11 N1 ? ? ? 1_555 B DC 2 N3 ? ? A DG 11 B DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A DG 11 N2 ? ? ? 1_555 B DC 2 O2 ? ? A DG 11 B DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A DG 11 O6 ? ? ? 1_555 B DC 2 N4 ? ? A DG 11 B DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A DC 12 N3 ? ? ? 1_555 B DG 1 N1 ? ? A DC 12 B DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A DC 12 N4 ? ? ? 1_555 B DG 1 O6 ? ? A DC 12 B DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A DC 12 O2 ? ? ? 1_555 B DG 1 N2 ? ? A DC 12 B DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software C ZN 701 ? 5 'binding site for residue ZN C 701' AC2 Software C ZN 702 ? 4 'binding site for residue ZN C 702' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 CYS C 6 ? CYS C 591 . ? 1_555 ? 2 AC1 5 GLY C 7 ? GLY C 592 . ? 1_555 ? 3 AC1 5 CYS C 9 ? CYS C 594 . ? 1_555 ? 4 AC1 5 CYS C 12 ? CYS C 597 . ? 1_555 ? 5 AC1 5 CYS C 39 ? CYS C 624 . ? 1_555 ? 6 AC2 4 CYS C 18 ? CYS C 603 . ? 1_555 ? 7 AC2 4 CYS C 21 ? CYS C 606 . ? 1_555 ? 8 AC2 4 CYS C 24 ? CYS C 609 . ? 1_555 ? 9 AC2 4 CYS C 34 ? CYS C 619 . ? 1_555 ? # _atom_sites.entry_id 6ASD _atom_sites.fract_transf_matrix[1][1] 0.013605 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.008442 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.031298 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.017991 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O P S X ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DG 1 1 1 DG DG A . n A 1 2 DC 2 2 2 DC DC A . n A 1 3 DC 3 3 3 DC DC A . n A 1 4 DA 4 4 4 DA DA A . n A 1 5 DC 5 5 5 DC DC A . n A 1 6 DC 6 6 6 DC DC A . n A 1 7 DG 7 7 7 DG DG A . n A 1 8 DG 8 8 8 DG DG A . n A 1 9 DT 9 9 9 DT DT A . n A 1 10 DG 10 10 10 DG DG A . n A 1 11 DG 11 11 11 DG DG A . n A 1 12 DC 12 12 12 DC DC A . n B 1 1 DG 1 1 1 DG DG B . n B 1 2 DC 2 2 2 DC DC B . n B 1 3 DC 3 3 3 DC DC B . n B 1 4 DA 4 4 4 DA DA B . n B 1 5 DC 5 5 5 DC DC B . n B 1 6 DC 6 6 6 DC DC B . n B 1 7 DG 7 7 7 DG DG B . n B 1 8 DG 8 8 8 DG DG B . n B 1 9 DT 9 9 9 DT DT B . n B 1 10 DG 10 10 10 DG DG B . n B 1 11 DG 11 11 11 DG DG B . n B 1 12 DC 12 12 12 DC DC B . n C 2 1 GLY 1 586 586 GLY GLY C . n C 2 2 LYS 2 587 587 LYS LYS C . n C 2 3 ARG 3 588 588 ARG ARG C . n C 2 4 LYS 4 589 589 LYS LYS C . n C 2 5 ARG 5 590 590 ARG ARG C . n C 2 6 CYS 6 591 591 CYS CYS C . n C 2 7 GLY 7 592 592 GLY GLY C . n C 2 8 VAL 8 593 593 VAL VAL C . n C 2 9 CYS 9 594 594 CYS CYS C . n C 2 10 GLU 10 595 595 GLU GLU C . n C 2 11 PRO 11 596 596 PRO PRO C . n C 2 12 CYS 12 597 597 CYS CYS C . n C 2 13 GLN 13 598 598 GLN GLN C . n C 2 14 GLN 14 599 599 GLN GLN C . n C 2 15 LYS 15 600 600 LYS LYS C . n C 2 16 THR 16 601 601 THR THR C . n C 2 17 ASN 17 602 602 ASN ASN C . n C 2 18 CYS 18 603 603 CYS CYS C . n C 2 19 GLY 19 604 604 GLY GLY C . n C 2 20 GLU 20 605 605 GLU GLU C . n C 2 21 CYS 21 606 606 CYS CYS C . n C 2 22 THR 22 607 607 THR THR C . n C 2 23 TYR 23 608 608 TYR TYR C . n C 2 24 CYS 24 609 609 CYS CYS C . n C 2 25 LYS 25 610 610 LYS LYS C . n C 2 26 ASN 26 611 611 ASN ASN C . n C 2 27 ARG 27 612 612 ARG ARG C . n C 2 28 LYS 28 613 613 LYS LYS C . n C 2 29 ASN 29 614 614 ASN ASN C . n C 2 30 SER 30 615 615 SER SER C . n C 2 31 HIS 31 616 616 HIS HIS C . n C 2 32 GLN 32 617 617 GLN GLN C . n C 2 33 ILE 33 618 618 ILE ILE C . n C 2 34 CYS 34 619 619 CYS CYS C . n C 2 35 LYS 35 620 620 LYS LYS C . n C 2 36 LYS 36 621 621 LYS LYS C . n C 2 37 ARG 37 622 622 ARG ARG C . n C 2 38 LYS 38 623 623 LYS LYS C . n C 2 39 CYS 39 624 624 CYS CYS C . n C 2 40 GLU 40 625 625 GLU GLU C . n C 2 41 GLU 41 626 626 GLU GLU C . n C 2 42 LEU 42 627 627 LEU LEU C . n C 2 43 LYS 43 628 628 LYS LYS C . n C 2 44 LYS 44 629 629 LYS LYS C . n C 2 45 LYS 45 630 630 LYS LYS C . n C 2 46 PRO 46 631 ? ? ? C . n C 2 47 SER 47 632 ? ? ? C . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name ? _pdbx_SG_project.full_name_of_center 'Structural Genomics Consortium' _pdbx_SG_project.initial_of_center SGC # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 3 UNX 1 101 10 UNX UNX A . E 3 UNX 1 102 23 UNX UNX A . F 3 UNX 1 103 26 UNX UNX A . G 3 UNX 1 101 2 UNX UNX B . H 3 UNX 1 102 8 UNX UNX B . I 3 UNX 1 103 11 UNX UNX B . J 3 UNX 1 104 15 UNX UNX B . K 3 UNX 1 105 16 UNX UNX B . L 3 UNX 1 106 17 UNX UNX B . M 4 ZN 1 701 1 ZN ZN C . N 4 ZN 1 702 2 ZN ZN C . O 3 UNX 1 703 3 UNX UNX C . P 3 UNX 1 704 9 UNX UNX C . Q 3 UNX 1 705 12 UNX UNX C . R 3 UNX 1 706 18 UNX UNX C . S 3 UNX 1 707 20 UNX UNX C . T 3 UNX 1 708 22 UNX UNX C . U 3 UNX 1 709 24 UNX UNX C . V 3 UNX 1 710 25 UNX UNX C . W 5 HOH 1 201 21 HOH HOH A . W 5 HOH 2 202 24 HOH HOH A . W 5 HOH 3 203 44 HOH HOH A . W 5 HOH 4 204 27 HOH HOH A . W 5 HOH 5 205 63 HOH HOH A . W 5 HOH 6 206 8 HOH HOH A . W 5 HOH 7 207 96 HOH HOH A . W 5 HOH 8 208 84 HOH HOH A . W 5 HOH 9 209 10 HOH HOH A . W 5 HOH 10 210 111 HOH HOH A . W 5 HOH 11 211 55 HOH HOH A . W 5 HOH 12 212 85 HOH HOH A . W 5 HOH 13 213 95 HOH HOH A . X 5 HOH 1 201 69 HOH HOH B . X 5 HOH 2 202 54 HOH HOH B . X 5 HOH 3 203 65 HOH HOH B . X 5 HOH 4 204 28 HOH HOH B . X 5 HOH 5 205 12 HOH HOH B . X 5 HOH 6 206 23 HOH HOH B . X 5 HOH 7 207 90 HOH HOH B . X 5 HOH 8 208 3 HOH HOH B . X 5 HOH 9 209 82 HOH HOH B . X 5 HOH 10 210 104 HOH HOH B . X 5 HOH 11 211 64 HOH HOH B . X 5 HOH 12 212 11 HOH HOH B . X 5 HOH 13 213 83 HOH HOH B . X 5 HOH 14 214 39 HOH HOH B . X 5 HOH 15 215 50 HOH HOH B . X 5 HOH 16 216 81 HOH HOH B . X 5 HOH 17 217 98 HOH HOH B . X 5 HOH 18 218 105 HOH HOH B . X 5 HOH 19 219 97 HOH HOH B . X 5 HOH 20 220 68 HOH HOH B . X 5 HOH 21 221 43 HOH HOH B . Y 5 HOH 1 801 34 HOH HOH C . Y 5 HOH 2 802 72 HOH HOH C . Y 5 HOH 3 803 109 HOH HOH C . Y 5 HOH 4 804 13 HOH HOH C . Y 5 HOH 5 805 66 HOH HOH C . Y 5 HOH 6 806 94 HOH HOH C . Y 5 HOH 7 807 87 HOH HOH C . Y 5 HOH 8 808 112 HOH HOH C . Y 5 HOH 9 809 49 HOH HOH C . Y 5 HOH 10 810 88 HOH HOH C . Y 5 HOH 11 811 40 HOH HOH C . Y 5 HOH 12 812 99 HOH HOH C . Y 5 HOH 13 813 7 HOH HOH C . Y 5 HOH 14 814 9 HOH HOH C . Y 5 HOH 15 815 6 HOH HOH C . Y 5 HOH 16 816 31 HOH HOH C . Y 5 HOH 17 817 67 HOH HOH C . Y 5 HOH 18 818 5 HOH HOH C . Y 5 HOH 19 819 74 HOH HOH C . Y 5 HOH 20 820 73 HOH HOH C . Y 5 HOH 21 821 29 HOH HOH C . Y 5 HOH 22 822 86 HOH HOH C . Y 5 HOH 23 823 89 HOH HOH C . Y 5 HOH 24 824 19 HOH HOH C . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 3010 ? 1 MORE -14 ? 1 'SSA (A^2)' 6740 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? C CYS 6 ? C CYS 591 ? 1_555 ZN ? M ZN . ? C ZN 701 ? 1_555 SG ? C CYS 9 ? C CYS 594 ? 1_555 101.6 ? 2 SG ? C CYS 6 ? C CYS 591 ? 1_555 ZN ? M ZN . ? C ZN 701 ? 1_555 SG ? C CYS 12 ? C CYS 597 ? 1_555 122.7 ? 3 SG ? C CYS 9 ? C CYS 594 ? 1_555 ZN ? M ZN . ? C ZN 701 ? 1_555 SG ? C CYS 12 ? C CYS 597 ? 1_555 95.5 ? 4 SG ? C CYS 6 ? C CYS 591 ? 1_555 ZN ? M ZN . ? C ZN 701 ? 1_555 SG ? C CYS 39 ? C CYS 624 ? 1_555 113.2 ? 5 SG ? C CYS 9 ? C CYS 594 ? 1_555 ZN ? M ZN . ? C ZN 701 ? 1_555 SG ? C CYS 39 ? C CYS 624 ? 1_555 113.8 ? 6 SG ? C CYS 12 ? C CYS 597 ? 1_555 ZN ? M ZN . ? C ZN 701 ? 1_555 SG ? C CYS 39 ? C CYS 624 ? 1_555 108.4 ? 7 SG ? C CYS 18 ? C CYS 603 ? 1_555 ZN ? N ZN . ? C ZN 702 ? 1_555 SG ? C CYS 21 ? C CYS 606 ? 1_555 108.5 ? 8 SG ? C CYS 18 ? C CYS 603 ? 1_555 ZN ? N ZN . ? C ZN 702 ? 1_555 SG ? C CYS 24 ? C CYS 609 ? 1_555 117.8 ? 9 SG ? C CYS 21 ? C CYS 606 ? 1_555 ZN ? N ZN . ? C ZN 702 ? 1_555 SG ? C CYS 24 ? C CYS 609 ? 1_555 106.0 ? 10 SG ? C CYS 18 ? C CYS 603 ? 1_555 ZN ? N ZN . ? C ZN 702 ? 1_555 SG ? C CYS 34 ? C CYS 619 ? 1_555 103.5 ? 11 SG ? C CYS 21 ? C CYS 606 ? 1_555 ZN ? N ZN . ? C ZN 702 ? 1_555 SG ? C CYS 34 ? C CYS 619 ? 1_555 118.9 ? 12 SG ? C CYS 24 ? C CYS 609 ? 1_555 ZN ? N ZN . ? C ZN 702 ? 1_555 SG ? C CYS 34 ? C CYS 619 ? 1_555 102.6 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2017-10-18 2 'Structure model' 1 1 2018-01-03 3 'Structure model' 1 2 2018-01-10 4 'Structure model' 1 3 2023-10-04 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' citation 4 4 'Structure model' chem_comp_atom 5 4 'Structure model' chem_comp_bond 6 4 'Structure model' database_2 7 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_ASTM' 4 2 'Structure model' '_citation.journal_id_CSD' 5 2 'Structure model' '_citation.journal_id_ISSN' 6 2 'Structure model' '_citation.pdbx_database_id_DOI' 7 2 'Structure model' '_citation.pdbx_database_id_PubMed' 8 2 'Structure model' '_citation.title' 9 2 'Structure model' '_citation.year' 10 3 'Structure model' '_citation.journal_volume' 11 3 'Structure model' '_citation.page_first' 12 3 'Structure model' '_citation.page_last' 13 3 'Structure model' '_citation.year' 14 4 'Structure model' '_database_2.pdbx_DOI' 15 4 'Structure model' '_database_2.pdbx_database_accession' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined -65.5442 28.7234 11.3996 0.0653 0.1101 0.0898 0.0580 -0.0012 -0.0071 7.7973 1.8113 0.6956 -2.0198 -0.7140 -0.5434 -0.1440 0.2018 -0.0578 -0.1623 -0.1890 -0.0208 -0.0040 0.0541 -0.0592 'X-RAY DIFFRACTION' 2 ? refined -65.1088 29.6323 9.9697 0.0510 0.1134 0.0436 0.0500 -0.0104 0.0080 7.5508 3.4103 1.2032 -3.0152 -1.3140 0.0749 -0.0500 0.0146 0.0354 0.2297 -0.2054 0.0660 -0.0835 0.0214 -0.0134 'X-RAY DIFFRACTION' 3 ? refined -64.8468 39.1645 18.8573 0.1420 0.0947 0.0142 0.0975 -0.0105 -0.0047 3.8397 6.8408 4.8100 2.4037 -0.9787 -1.4168 0.0258 0.1264 -0.1522 -0.1784 0.0632 -0.1477 0.6348 -0.2363 -0.0045 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 1 A 12 ? ? ? ? ? ? 'X-RAY DIFFRACTION' 2 2 B 1 B 12 ? ? ? ? ? ? 'X-RAY DIFFRACTION' 3 3 C 586 C 630 ? ? ? ? ? ? # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0158 1 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? 0.5.32 2 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.22 3 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 5 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 NE _pdbx_validate_rmsd_angle.auth_asym_id_1 C _pdbx_validate_rmsd_angle.auth_comp_id_1 ARG _pdbx_validate_rmsd_angle.auth_seq_id_1 590 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 A _pdbx_validate_rmsd_angle.auth_atom_id_2 CZ _pdbx_validate_rmsd_angle.auth_asym_id_2 C _pdbx_validate_rmsd_angle.auth_comp_id_2 ARG _pdbx_validate_rmsd_angle.auth_seq_id_2 590 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 A _pdbx_validate_rmsd_angle.auth_atom_id_3 NH1 _pdbx_validate_rmsd_angle.auth_asym_id_3 C _pdbx_validate_rmsd_angle.auth_comp_id_3 ARG _pdbx_validate_rmsd_angle.auth_seq_id_3 590 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 A _pdbx_validate_rmsd_angle.angle_value 123.37 _pdbx_validate_rmsd_angle.angle_target_value 120.30 _pdbx_validate_rmsd_angle.angle_deviation 3.07 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.50 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 C GLY 586 ? N ? C GLY 1 N 2 1 Y 1 C GLU 595 ? OE1 ? C GLU 10 OE1 3 1 Y 1 C GLU 595 ? OE2 ? C GLU 10 OE2 4 1 Y 1 C LYS 600 ? CD ? C LYS 15 CD 5 1 Y 1 C LYS 600 ? CE ? C LYS 15 CE 6 1 Y 1 C LYS 600 ? NZ ? C LYS 15 NZ 7 1 Y 1 C LYS 613 ? CD ? C LYS 28 CD 8 1 Y 1 C LYS 613 ? CE ? C LYS 28 CE 9 1 Y 1 C LYS 613 ? NZ ? C LYS 28 NZ 10 1 Y 1 C LYS 621 ? NZ ? C LYS 36 NZ 11 1 Y 1 C LYS 630 ? CG ? C LYS 45 CG 12 1 Y 1 C LYS 630 ? CD ? C LYS 45 CD 13 1 Y 1 C LYS 630 ? CE ? C LYS 45 CE 14 1 Y 1 C LYS 630 ? NZ ? C LYS 45 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 C PRO 631 ? C PRO 46 2 1 Y 1 C SER 632 ? C SER 47 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ARG N N N N 1 ARG CA C N S 2 ARG C C N N 3 ARG O O N N 4 ARG CB C N N 5 ARG CG C N N 6 ARG CD C N N 7 ARG NE N N N 8 ARG CZ C N N 9 ARG NH1 N N N 10 ARG NH2 N N N 11 ARG OXT O N N 12 ARG H H N N 13 ARG H2 H N N 14 ARG HA H N N 15 ARG HB2 H N N 16 ARG HB3 H N N 17 ARG HG2 H N N 18 ARG HG3 H N N 19 ARG HD2 H N N 20 ARG HD3 H N N 21 ARG HE H N N 22 ARG HH11 H N N 23 ARG HH12 H N N 24 ARG HH21 H N N 25 ARG HH22 H N N 26 ARG HXT H N N 27 ASN N N N N 28 ASN CA C N S 29 ASN C C N N 30 ASN O O N N 31 ASN CB C N N 32 ASN CG C N N 33 ASN OD1 O N N 34 ASN ND2 N N N 35 ASN OXT O N N 36 ASN H H N N 37 ASN H2 H N N 38 ASN HA H N N 39 ASN HB2 H N N 40 ASN HB3 H N N 41 ASN HD21 H N N 42 ASN HD22 H N N 43 ASN HXT H N N 44 CYS N N N N 45 CYS CA C N R 46 CYS C C N N 47 CYS O O N N 48 CYS CB C N N 49 CYS SG S N N 50 CYS OXT O N N 51 CYS H H N N 52 CYS H2 H N N 53 CYS HA H N N 54 CYS HB2 H N N 55 CYS HB3 H N N 56 CYS HG H N N 57 CYS HXT H N N 58 DA OP3 O N N 59 DA P P N N 60 DA OP1 O N N 61 DA OP2 O N N 62 DA "O5'" O N N 63 DA "C5'" C N N 64 DA "C4'" C N R 65 DA "O4'" O N N 66 DA "C3'" C N S 67 DA "O3'" O N N 68 DA "C2'" C N N 69 DA "C1'" C N R 70 DA N9 N Y N 71 DA C8 C Y N 72 DA N7 N Y N 73 DA C5 C Y N 74 DA C6 C Y N 75 DA N6 N N N 76 DA N1 N Y N 77 DA C2 C Y N 78 DA N3 N Y N 79 DA C4 C Y N 80 DA HOP3 H N N 81 DA HOP2 H N N 82 DA "H5'" H N N 83 DA "H5''" H N N 84 DA "H4'" H N N 85 DA "H3'" H N N 86 DA "HO3'" H N N 87 DA "H2'" H N N 88 DA "H2''" H N N 89 DA "H1'" H N N 90 DA H8 H N N 91 DA H61 H N N 92 DA H62 H N N 93 DA H2 H N N 94 DC OP3 O N N 95 DC P P N N 96 DC OP1 O N N 97 DC OP2 O N N 98 DC "O5'" O N N 99 DC "C5'" C N N 100 DC "C4'" C N R 101 DC "O4'" O N N 102 DC "C3'" C N S 103 DC "O3'" O N N 104 DC "C2'" C N N 105 DC "C1'" C N R 106 DC N1 N N N 107 DC C2 C N N 108 DC O2 O N N 109 DC N3 N N N 110 DC C4 C N N 111 DC N4 N N N 112 DC C5 C N N 113 DC C6 C N N 114 DC HOP3 H N N 115 DC HOP2 H N N 116 DC "H5'" H N N 117 DC "H5''" H N N 118 DC "H4'" H N N 119 DC "H3'" H N N 120 DC "HO3'" H N N 121 DC "H2'" H N N 122 DC "H2''" H N N 123 DC "H1'" H N N 124 DC H41 H N N 125 DC H42 H N N 126 DC H5 H N N 127 DC H6 H N N 128 DG OP3 O N N 129 DG P P N N 130 DG OP1 O N N 131 DG OP2 O N N 132 DG "O5'" O N N 133 DG "C5'" C N N 134 DG "C4'" C N R 135 DG "O4'" O N N 136 DG "C3'" C N S 137 DG "O3'" O N N 138 DG "C2'" C N N 139 DG "C1'" C N R 140 DG N9 N Y N 141 DG C8 C Y N 142 DG N7 N Y N 143 DG C5 C Y N 144 DG C6 C N N 145 DG O6 O N N 146 DG N1 N N N 147 DG C2 C N N 148 DG N2 N N N 149 DG N3 N N N 150 DG C4 C Y N 151 DG HOP3 H N N 152 DG HOP2 H N N 153 DG "H5'" H N N 154 DG "H5''" H N N 155 DG "H4'" H N N 156 DG "H3'" H N N 157 DG "HO3'" H N N 158 DG "H2'" H N N 159 DG "H2''" H N N 160 DG "H1'" H N N 161 DG H8 H N N 162 DG H1 H N N 163 DG H21 H N N 164 DG H22 H N N 165 DT OP3 O N N 166 DT P P N N 167 DT OP1 O N N 168 DT OP2 O N N 169 DT "O5'" O N N 170 DT "C5'" C N N 171 DT "C4'" C N R 172 DT "O4'" O N N 173 DT "C3'" C N S 174 DT "O3'" O N N 175 DT "C2'" C N N 176 DT "C1'" C N R 177 DT N1 N N N 178 DT C2 C N N 179 DT O2 O N N 180 DT N3 N N N 181 DT C4 C N N 182 DT O4 O N N 183 DT C5 C N N 184 DT C7 C N N 185 DT C6 C N N 186 DT HOP3 H N N 187 DT HOP2 H N N 188 DT "H5'" H N N 189 DT "H5''" H N N 190 DT "H4'" H N N 191 DT "H3'" H N N 192 DT "HO3'" H N N 193 DT "H2'" H N N 194 DT "H2''" H N N 195 DT "H1'" H N N 196 DT H3 H N N 197 DT H71 H N N 198 DT H72 H N N 199 DT H73 H N N 200 DT H6 H N N 201 GLN N N N N 202 GLN CA C N S 203 GLN C C N N 204 GLN O O N N 205 GLN CB C N N 206 GLN CG C N N 207 GLN CD C N N 208 GLN OE1 O N N 209 GLN NE2 N N N 210 GLN OXT O N N 211 GLN H H N N 212 GLN H2 H N N 213 GLN HA H N N 214 GLN HB2 H N N 215 GLN HB3 H N N 216 GLN HG2 H N N 217 GLN HG3 H N N 218 GLN HE21 H N N 219 GLN HE22 H N N 220 GLN HXT H N N 221 GLU N N N N 222 GLU CA C N S 223 GLU C C N N 224 GLU O O N N 225 GLU CB C N N 226 GLU CG C N N 227 GLU CD C N N 228 GLU OE1 O N N 229 GLU OE2 O N N 230 GLU OXT O N N 231 GLU H H N N 232 GLU H2 H N N 233 GLU HA H N N 234 GLU HB2 H N N 235 GLU HB3 H N N 236 GLU HG2 H N N 237 GLU HG3 H N N 238 GLU HE2 H N N 239 GLU HXT H N N 240 GLY N N N N 241 GLY CA C N N 242 GLY C C N N 243 GLY O O N N 244 GLY OXT O N N 245 GLY H H N N 246 GLY H2 H N N 247 GLY HA2 H N N 248 GLY HA3 H N N 249 GLY HXT H N N 250 HIS N N N N 251 HIS CA C N S 252 HIS C C N N 253 HIS O O N N 254 HIS CB C N N 255 HIS CG C Y N 256 HIS ND1 N Y N 257 HIS CD2 C Y N 258 HIS CE1 C Y N 259 HIS NE2 N Y N 260 HIS OXT O N N 261 HIS H H N N 262 HIS H2 H N N 263 HIS HA H N N 264 HIS HB2 H N N 265 HIS HB3 H N N 266 HIS HD1 H N N 267 HIS HD2 H N N 268 HIS HE1 H N N 269 HIS HE2 H N N 270 HIS HXT H N N 271 HOH O O N N 272 HOH H1 H N N 273 HOH H2 H N N 274 ILE N N N N 275 ILE CA C N S 276 ILE C C N N 277 ILE O O N N 278 ILE CB C N S 279 ILE CG1 C N N 280 ILE CG2 C N N 281 ILE CD1 C N N 282 ILE OXT O N N 283 ILE H H N N 284 ILE H2 H N N 285 ILE HA H N N 286 ILE HB H N N 287 ILE HG12 H N N 288 ILE HG13 H N N 289 ILE HG21 H N N 290 ILE HG22 H N N 291 ILE HG23 H N N 292 ILE HD11 H N N 293 ILE HD12 H N N 294 ILE HD13 H N N 295 ILE HXT H N N 296 LEU N N N N 297 LEU CA C N S 298 LEU C C N N 299 LEU O O N N 300 LEU CB C N N 301 LEU CG C N N 302 LEU CD1 C N N 303 LEU CD2 C N N 304 LEU OXT O N N 305 LEU H H N N 306 LEU H2 H N N 307 LEU HA H N N 308 LEU HB2 H N N 309 LEU HB3 H N N 310 LEU HG H N N 311 LEU HD11 H N N 312 LEU HD12 H N N 313 LEU HD13 H N N 314 LEU HD21 H N N 315 LEU HD22 H N N 316 LEU HD23 H N N 317 LEU HXT H N N 318 LYS N N N N 319 LYS CA C N S 320 LYS C C N N 321 LYS O O N N 322 LYS CB C N N 323 LYS CG C N N 324 LYS CD C N N 325 LYS CE C N N 326 LYS NZ N N N 327 LYS OXT O N N 328 LYS H H N N 329 LYS H2 H N N 330 LYS HA H N N 331 LYS HB2 H N N 332 LYS HB3 H N N 333 LYS HG2 H N N 334 LYS HG3 H N N 335 LYS HD2 H N N 336 LYS HD3 H N N 337 LYS HE2 H N N 338 LYS HE3 H N N 339 LYS HZ1 H N N 340 LYS HZ2 H N N 341 LYS HZ3 H N N 342 LYS HXT H N N 343 PRO N N N N 344 PRO CA C N S 345 PRO C C N N 346 PRO O O N N 347 PRO CB C N N 348 PRO CG C N N 349 PRO CD C N N 350 PRO OXT O N N 351 PRO H H N N 352 PRO HA H N N 353 PRO HB2 H N N 354 PRO HB3 H N N 355 PRO HG2 H N N 356 PRO HG3 H N N 357 PRO HD2 H N N 358 PRO HD3 H N N 359 PRO HXT H N N 360 SER N N N N 361 SER CA C N S 362 SER C C N N 363 SER O O N N 364 SER CB C N N 365 SER OG O N N 366 SER OXT O N N 367 SER H H N N 368 SER H2 H N N 369 SER HA H N N 370 SER HB2 H N N 371 SER HB3 H N N 372 SER HG H N N 373 SER HXT H N N 374 THR N N N N 375 THR CA C N S 376 THR C C N N 377 THR O O N N 378 THR CB C N R 379 THR OG1 O N N 380 THR CG2 C N N 381 THR OXT O N N 382 THR H H N N 383 THR H2 H N N 384 THR HA H N N 385 THR HB H N N 386 THR HG1 H N N 387 THR HG21 H N N 388 THR HG22 H N N 389 THR HG23 H N N 390 THR HXT H N N 391 TYR N N N N 392 TYR CA C N S 393 TYR C C N N 394 TYR O O N N 395 TYR CB C N N 396 TYR CG C Y N 397 TYR CD1 C Y N 398 TYR CD2 C Y N 399 TYR CE1 C Y N 400 TYR CE2 C Y N 401 TYR CZ C Y N 402 TYR OH O N N 403 TYR OXT O N N 404 TYR H H N N 405 TYR H2 H N N 406 TYR HA H N N 407 TYR HB2 H N N 408 TYR HB3 H N N 409 TYR HD1 H N N 410 TYR HD2 H N N 411 TYR HE1 H N N 412 TYR HE2 H N N 413 TYR HH H N N 414 TYR HXT H N N 415 VAL N N N N 416 VAL CA C N S 417 VAL C C N N 418 VAL O O N N 419 VAL CB C N N 420 VAL CG1 C N N 421 VAL CG2 C N N 422 VAL OXT O N N 423 VAL H H N N 424 VAL H2 H N N 425 VAL HA H N N 426 VAL HB H N N 427 VAL HG11 H N N 428 VAL HG12 H N N 429 VAL HG13 H N N 430 VAL HG21 H N N 431 VAL HG22 H N N 432 VAL HG23 H N N 433 VAL HXT H N N 434 ZN ZN ZN N N 435 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ARG N CA sing N N 1 ARG N H sing N N 2 ARG N H2 sing N N 3 ARG CA C sing N N 4 ARG CA CB sing N N 5 ARG CA HA sing N N 6 ARG C O doub N N 7 ARG C OXT sing N N 8 ARG CB CG sing N N 9 ARG CB HB2 sing N N 10 ARG CB HB3 sing N N 11 ARG CG CD sing N N 12 ARG CG HG2 sing N N 13 ARG CG HG3 sing N N 14 ARG CD NE sing N N 15 ARG CD HD2 sing N N 16 ARG CD HD3 sing N N 17 ARG NE CZ sing N N 18 ARG NE HE sing N N 19 ARG CZ NH1 sing N N 20 ARG CZ NH2 doub N N 21 ARG NH1 HH11 sing N N 22 ARG NH1 HH12 sing N N 23 ARG NH2 HH21 sing N N 24 ARG NH2 HH22 sing N N 25 ARG OXT HXT sing N N 26 ASN N CA sing N N 27 ASN N H sing N N 28 ASN N H2 sing N N 29 ASN CA C sing N N 30 ASN CA CB sing N N 31 ASN CA HA sing N N 32 ASN C O doub N N 33 ASN C OXT sing N N 34 ASN CB CG sing N N 35 ASN CB HB2 sing N N 36 ASN CB HB3 sing N N 37 ASN CG OD1 doub N N 38 ASN CG ND2 sing N N 39 ASN ND2 HD21 sing N N 40 ASN ND2 HD22 sing N N 41 ASN OXT HXT sing N N 42 CYS N CA sing N N 43 CYS N H sing N N 44 CYS N H2 sing N N 45 CYS CA C sing N N 46 CYS CA CB sing N N 47 CYS CA HA sing N N 48 CYS C O doub N N 49 CYS C OXT sing N N 50 CYS CB SG sing N N 51 CYS CB HB2 sing N N 52 CYS CB HB3 sing N N 53 CYS SG HG sing N N 54 CYS OXT HXT sing N N 55 DA OP3 P sing N N 56 DA OP3 HOP3 sing N N 57 DA P OP1 doub N N 58 DA P OP2 sing N N 59 DA P "O5'" sing N N 60 DA OP2 HOP2 sing N N 61 DA "O5'" "C5'" sing N N 62 DA "C5'" "C4'" sing N N 63 DA "C5'" "H5'" sing N N 64 DA "C5'" "H5''" sing N N 65 DA "C4'" "O4'" sing N N 66 DA "C4'" "C3'" sing N N 67 DA "C4'" "H4'" sing N N 68 DA "O4'" "C1'" sing N N 69 DA "C3'" "O3'" sing N N 70 DA "C3'" "C2'" sing N N 71 DA "C3'" "H3'" sing N N 72 DA "O3'" "HO3'" sing N N 73 DA "C2'" "C1'" sing N N 74 DA "C2'" "H2'" sing N N 75 DA "C2'" "H2''" sing N N 76 DA "C1'" N9 sing N N 77 DA "C1'" "H1'" sing N N 78 DA N9 C8 sing Y N 79 DA N9 C4 sing Y N 80 DA C8 N7 doub Y N 81 DA C8 H8 sing N N 82 DA N7 C5 sing Y N 83 DA C5 C6 sing Y N 84 DA C5 C4 doub Y N 85 DA C6 N6 sing N N 86 DA C6 N1 doub Y N 87 DA N6 H61 sing N N 88 DA N6 H62 sing N N 89 DA N1 C2 sing Y N 90 DA C2 N3 doub Y N 91 DA C2 H2 sing N N 92 DA N3 C4 sing Y N 93 DC OP3 P sing N N 94 DC OP3 HOP3 sing N N 95 DC P OP1 doub N N 96 DC P OP2 sing N N 97 DC P "O5'" sing N N 98 DC OP2 HOP2 sing N N 99 DC "O5'" "C5'" sing N N 100 DC "C5'" "C4'" sing N N 101 DC "C5'" "H5'" sing N N 102 DC "C5'" "H5''" sing N N 103 DC "C4'" "O4'" sing N N 104 DC "C4'" "C3'" sing N N 105 DC "C4'" "H4'" sing N N 106 DC "O4'" "C1'" sing N N 107 DC "C3'" "O3'" sing N N 108 DC "C3'" "C2'" sing N N 109 DC "C3'" "H3'" sing N N 110 DC "O3'" "HO3'" sing N N 111 DC "C2'" "C1'" sing N N 112 DC "C2'" "H2'" sing N N 113 DC "C2'" "H2''" sing N N 114 DC "C1'" N1 sing N N 115 DC "C1'" "H1'" sing N N 116 DC N1 C2 sing N N 117 DC N1 C6 sing N N 118 DC C2 O2 doub N N 119 DC C2 N3 sing N N 120 DC N3 C4 doub N N 121 DC C4 N4 sing N N 122 DC C4 C5 sing N N 123 DC N4 H41 sing N N 124 DC N4 H42 sing N N 125 DC C5 C6 doub N N 126 DC C5 H5 sing N N 127 DC C6 H6 sing N N 128 DG OP3 P sing N N 129 DG OP3 HOP3 sing N N 130 DG P OP1 doub N N 131 DG P OP2 sing N N 132 DG P "O5'" sing N N 133 DG OP2 HOP2 sing N N 134 DG "O5'" "C5'" sing N N 135 DG "C5'" "C4'" sing N N 136 DG "C5'" "H5'" sing N N 137 DG "C5'" "H5''" sing N N 138 DG "C4'" "O4'" sing N N 139 DG "C4'" "C3'" sing N N 140 DG "C4'" "H4'" sing N N 141 DG "O4'" "C1'" sing N N 142 DG "C3'" "O3'" sing N N 143 DG "C3'" "C2'" sing N N 144 DG "C3'" "H3'" sing N N 145 DG "O3'" "HO3'" sing N N 146 DG "C2'" "C1'" sing N N 147 DG "C2'" "H2'" sing N N 148 DG "C2'" "H2''" sing N N 149 DG "C1'" N9 sing N N 150 DG "C1'" "H1'" sing N N 151 DG N9 C8 sing Y N 152 DG N9 C4 sing Y N 153 DG C8 N7 doub Y N 154 DG C8 H8 sing N N 155 DG N7 C5 sing Y N 156 DG C5 C6 sing N N 157 DG C5 C4 doub Y N 158 DG C6 O6 doub N N 159 DG C6 N1 sing N N 160 DG N1 C2 sing N N 161 DG N1 H1 sing N N 162 DG C2 N2 sing N N 163 DG C2 N3 doub N N 164 DG N2 H21 sing N N 165 DG N2 H22 sing N N 166 DG N3 C4 sing N N 167 DT OP3 P sing N N 168 DT OP3 HOP3 sing N N 169 DT P OP1 doub N N 170 DT P OP2 sing N N 171 DT P "O5'" sing N N 172 DT OP2 HOP2 sing N N 173 DT "O5'" "C5'" sing N N 174 DT "C5'" "C4'" sing N N 175 DT "C5'" "H5'" sing N N 176 DT "C5'" "H5''" sing N N 177 DT "C4'" "O4'" sing N N 178 DT "C4'" "C3'" sing N N 179 DT "C4'" "H4'" sing N N 180 DT "O4'" "C1'" sing N N 181 DT "C3'" "O3'" sing N N 182 DT "C3'" "C2'" sing N N 183 DT "C3'" "H3'" sing N N 184 DT "O3'" "HO3'" sing N N 185 DT "C2'" "C1'" sing N N 186 DT "C2'" "H2'" sing N N 187 DT "C2'" "H2''" sing N N 188 DT "C1'" N1 sing N N 189 DT "C1'" "H1'" sing N N 190 DT N1 C2 sing N N 191 DT N1 C6 sing N N 192 DT C2 O2 doub N N 193 DT C2 N3 sing N N 194 DT N3 C4 sing N N 195 DT N3 H3 sing N N 196 DT C4 O4 doub N N 197 DT C4 C5 sing N N 198 DT C5 C7 sing N N 199 DT C5 C6 doub N N 200 DT C7 H71 sing N N 201 DT C7 H72 sing N N 202 DT C7 H73 sing N N 203 DT C6 H6 sing N N 204 GLN N CA sing N N 205 GLN N H sing N N 206 GLN N H2 sing N N 207 GLN CA C sing N N 208 GLN CA CB sing N N 209 GLN CA HA sing N N 210 GLN C O doub N N 211 GLN C OXT sing N N 212 GLN CB CG sing N N 213 GLN CB HB2 sing N N 214 GLN CB HB3 sing N N 215 GLN CG CD sing N N 216 GLN CG HG2 sing N N 217 GLN CG HG3 sing N N 218 GLN CD OE1 doub N N 219 GLN CD NE2 sing N N 220 GLN NE2 HE21 sing N N 221 GLN NE2 HE22 sing N N 222 GLN OXT HXT sing N N 223 GLU N CA sing N N 224 GLU N H sing N N 225 GLU N H2 sing N N 226 GLU CA C sing N N 227 GLU CA CB sing N N 228 GLU CA HA sing N N 229 GLU C O doub N N 230 GLU C OXT sing N N 231 GLU CB CG sing N N 232 GLU CB HB2 sing N N 233 GLU CB HB3 sing N N 234 GLU CG CD sing N N 235 GLU CG HG2 sing N N 236 GLU CG HG3 sing N N 237 GLU CD OE1 doub N N 238 GLU CD OE2 sing N N 239 GLU OE2 HE2 sing N N 240 GLU OXT HXT sing N N 241 GLY N CA sing N N 242 GLY N H sing N N 243 GLY N H2 sing N N 244 GLY CA C sing N N 245 GLY CA HA2 sing N N 246 GLY CA HA3 sing N N 247 GLY C O doub N N 248 GLY C OXT sing N N 249 GLY OXT HXT sing N N 250 HIS N CA sing N N 251 HIS N H sing N N 252 HIS N H2 sing N N 253 HIS CA C sing N N 254 HIS CA CB sing N N 255 HIS CA HA sing N N 256 HIS C O doub N N 257 HIS C OXT sing N N 258 HIS CB CG sing N N 259 HIS CB HB2 sing N N 260 HIS CB HB3 sing N N 261 HIS CG ND1 sing Y N 262 HIS CG CD2 doub Y N 263 HIS ND1 CE1 doub Y N 264 HIS ND1 HD1 sing N N 265 HIS CD2 NE2 sing Y N 266 HIS CD2 HD2 sing N N 267 HIS CE1 NE2 sing Y N 268 HIS CE1 HE1 sing N N 269 HIS NE2 HE2 sing N N 270 HIS OXT HXT sing N N 271 HOH O H1 sing N N 272 HOH O H2 sing N N 273 ILE N CA sing N N 274 ILE N H sing N N 275 ILE N H2 sing N N 276 ILE CA C sing N N 277 ILE CA CB sing N N 278 ILE CA HA sing N N 279 ILE C O doub N N 280 ILE C OXT sing N N 281 ILE CB CG1 sing N N 282 ILE CB CG2 sing N N 283 ILE CB HB sing N N 284 ILE CG1 CD1 sing N N 285 ILE CG1 HG12 sing N N 286 ILE CG1 HG13 sing N N 287 ILE CG2 HG21 sing N N 288 ILE CG2 HG22 sing N N 289 ILE CG2 HG23 sing N N 290 ILE CD1 HD11 sing N N 291 ILE CD1 HD12 sing N N 292 ILE CD1 HD13 sing N N 293 ILE OXT HXT sing N N 294 LEU N CA sing N N 295 LEU N H sing N N 296 LEU N H2 sing N N 297 LEU CA C sing N N 298 LEU CA CB sing N N 299 LEU CA HA sing N N 300 LEU C O doub N N 301 LEU C OXT sing N N 302 LEU CB CG sing N N 303 LEU CB HB2 sing N N 304 LEU CB HB3 sing N N 305 LEU CG CD1 sing N N 306 LEU CG CD2 sing N N 307 LEU CG HG sing N N 308 LEU CD1 HD11 sing N N 309 LEU CD1 HD12 sing N N 310 LEU CD1 HD13 sing N N 311 LEU CD2 HD21 sing N N 312 LEU CD2 HD22 sing N N 313 LEU CD2 HD23 sing N N 314 LEU OXT HXT sing N N 315 LYS N CA sing N N 316 LYS N H sing N N 317 LYS N H2 sing N N 318 LYS CA C sing N N 319 LYS CA CB sing N N 320 LYS CA HA sing N N 321 LYS C O doub N N 322 LYS C OXT sing N N 323 LYS CB CG sing N N 324 LYS CB HB2 sing N N 325 LYS CB HB3 sing N N 326 LYS CG CD sing N N 327 LYS CG HG2 sing N N 328 LYS CG HG3 sing N N 329 LYS CD CE sing N N 330 LYS CD HD2 sing N N 331 LYS CD HD3 sing N N 332 LYS CE NZ sing N N 333 LYS CE HE2 sing N N 334 LYS CE HE3 sing N N 335 LYS NZ HZ1 sing N N 336 LYS NZ HZ2 sing N N 337 LYS NZ HZ3 sing N N 338 LYS OXT HXT sing N N 339 PRO N CA sing N N 340 PRO N CD sing N N 341 PRO N H sing N N 342 PRO CA C sing N N 343 PRO CA CB sing N N 344 PRO CA HA sing N N 345 PRO C O doub N N 346 PRO C OXT sing N N 347 PRO CB CG sing N N 348 PRO CB HB2 sing N N 349 PRO CB HB3 sing N N 350 PRO CG CD sing N N 351 PRO CG HG2 sing N N 352 PRO CG HG3 sing N N 353 PRO CD HD2 sing N N 354 PRO CD HD3 sing N N 355 PRO OXT HXT sing N N 356 SER N CA sing N N 357 SER N H sing N N 358 SER N H2 sing N N 359 SER CA C sing N N 360 SER CA CB sing N N 361 SER CA HA sing N N 362 SER C O doub N N 363 SER C OXT sing N N 364 SER CB OG sing N N 365 SER CB HB2 sing N N 366 SER CB HB3 sing N N 367 SER OG HG sing N N 368 SER OXT HXT sing N N 369 THR N CA sing N N 370 THR N H sing N N 371 THR N H2 sing N N 372 THR CA C sing N N 373 THR CA CB sing N N 374 THR CA HA sing N N 375 THR C O doub N N 376 THR C OXT sing N N 377 THR CB OG1 sing N N 378 THR CB CG2 sing N N 379 THR CB HB sing N N 380 THR OG1 HG1 sing N N 381 THR CG2 HG21 sing N N 382 THR CG2 HG22 sing N N 383 THR CG2 HG23 sing N N 384 THR OXT HXT sing N N 385 TYR N CA sing N N 386 TYR N H sing N N 387 TYR N H2 sing N N 388 TYR CA C sing N N 389 TYR CA CB sing N N 390 TYR CA HA sing N N 391 TYR C O doub N N 392 TYR C OXT sing N N 393 TYR CB CG sing N N 394 TYR CB HB2 sing N N 395 TYR CB HB3 sing N N 396 TYR CG CD1 doub Y N 397 TYR CG CD2 sing Y N 398 TYR CD1 CE1 sing Y N 399 TYR CD1 HD1 sing N N 400 TYR CD2 CE2 doub Y N 401 TYR CD2 HD2 sing N N 402 TYR CE1 CZ doub Y N 403 TYR CE1 HE1 sing N N 404 TYR CE2 CZ sing Y N 405 TYR CE2 HE2 sing N N 406 TYR CZ OH sing N N 407 TYR OH HH sing N N 408 TYR OXT HXT sing N N 409 VAL N CA sing N N 410 VAL N H sing N N 411 VAL N H2 sing N N 412 VAL CA C sing N N 413 VAL CA CB sing N N 414 VAL CA HA sing N N 415 VAL C O doub N N 416 VAL C OXT sing N N 417 VAL CB CG1 sing N N 418 VAL CB CG2 sing N N 419 VAL CB HB sing N N 420 VAL CG1 HG11 sing N N 421 VAL CG1 HG12 sing N N 422 VAL CG1 HG13 sing N N 423 VAL CG2 HG21 sing N N 424 VAL CG2 HG22 sing N N 425 VAL CG2 HG23 sing N N 426 VAL OXT HXT sing N N 427 # _ndb_struct_conf_na.entry_id 6ASD _ndb_struct_conf_na.feature 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DG 1 1_555 B DC 12 1_555 -0.326 -0.135 -0.083 -0.721 -5.828 -0.126 1 A_DG1:DC12_B A 1 ? B 12 ? 19 1 1 A DC 2 1_555 B DG 11 1_555 0.084 -0.111 0.222 -4.314 -12.042 -0.511 2 A_DC2:DG11_B A 2 ? B 11 ? 19 1 1 A DC 3 1_555 B DG 10 1_555 0.422 -0.168 -0.011 0.249 -7.865 -1.559 3 A_DC3:DG10_B A 3 ? B 10 ? 19 1 1 A DA 4 1_555 B DT 9 1_555 -0.090 -0.026 -0.061 -3.497 -5.120 -1.984 4 A_DA4:DT9_B A 4 ? B 9 ? 20 1 1 A DC 5 1_555 B DG 8 1_555 0.298 -0.070 0.088 0.023 -7.569 -0.747 5 A_DC5:DG8_B A 5 ? B 8 ? 19 1 1 A DC 6 1_555 B DG 7 1_555 0.065 -0.108 0.171 -2.542 -11.789 -1.371 6 A_DC6:DG7_B A 6 ? B 7 ? 19 1 1 A DG 7 1_555 B DC 6 1_555 -0.216 -0.132 0.047 -1.379 -9.062 -1.098 7 A_DG7:DC6_B A 7 ? B 6 ? 19 1 1 A DG 8 1_555 B DC 5 1_555 -0.028 -0.087 0.078 -3.907 -11.998 -4.333 8 A_DG8:DC5_B A 8 ? B 5 ? 19 1 1 A DT 9 1_555 B DA 4 1_555 -0.140 -0.118 0.035 -3.762 2.075 0.921 9 A_DT9:DA4_B A 9 ? B 4 ? 20 1 1 A DG 10 1_555 B DC 3 1_555 -0.245 -0.038 0.115 5.540 -8.810 -0.610 10 A_DG10:DC3_B A 10 ? B 3 ? 19 1 1 A DG 11 1_555 B DC 2 1_555 -0.141 -0.111 0.128 2.947 -7.616 -1.669 11 A_DG11:DC2_B A 11 ? B 2 ? 19 1 1 A DC 12 1_555 B DG 1 1_555 0.292 -0.154 -0.011 0.703 -6.051 -0.260 12 A_DC12:DG1_B A 12 ? B 1 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DG 1 1_555 B DC 12 1_555 A DC 2 1_555 B DG 11 1_555 -0.843 -0.253 3.290 -3.347 -1.126 36.852 -0.245 0.870 3.357 -1.776 5.279 37.015 1 AA_DG1DC2:DG11DC12_BB A 1 ? B 12 ? A 2 ? B 11 ? 1 A DC 2 1_555 B DG 11 1_555 A DC 3 1_555 B DG 10 1_555 -0.071 0.438 3.186 2.809 6.529 30.035 -0.431 0.674 3.189 12.381 -5.326 30.846 2 AA_DC2DC3:DG10DG11_BB A 2 ? B 11 ? A 3 ? B 10 ? 1 A DC 3 1_555 B DG 10 1_555 A DA 4 1_555 B DT 9 1_555 0.186 2.032 3.391 -0.254 -5.026 47.956 2.883 -0.247 3.174 -6.164 0.312 48.204 3 AA_DC3DA4:DT9DG10_BB A 3 ? B 10 ? A 4 ? B 9 ? 1 A DA 4 1_555 B DT 9 1_555 A DC 5 1_555 B DG 8 1_555 0.201 -0.357 3.248 -2.630 4.595 27.602 -1.796 -1.021 3.116 9.520 5.448 28.096 4 AA_DA4DC5:DG8DT9_BB A 4 ? B 9 ? A 5 ? B 8 ? 1 A DC 5 1_555 B DG 8 1_555 A DC 6 1_555 B DG 7 1_555 -0.992 0.150 3.320 -1.530 3.055 36.141 -0.197 1.373 3.359 4.911 2.459 36.297 5 AA_DC5DC6:DG7DG8_BB A 5 ? B 8 ? A 6 ? B 7 ? 1 A DC 6 1_555 B DG 7 1_555 A DG 7 1_555 B DC 6 1_555 1.094 0.969 3.297 2.421 7.059 34.134 0.493 -1.439 3.489 11.850 -4.064 34.916 6 AA_DC6DG7:DC6DG7_BB A 6 ? B 7 ? A 7 ? B 6 ? 1 A DG 7 1_555 B DC 6 1_555 A DG 8 1_555 B DC 5 1_555 -1.430 0.608 3.332 -5.135 1.588 36.455 0.736 1.530 3.517 2.521 8.153 36.836 7 AA_DG7DG8:DC5DC6_BB A 7 ? B 6 ? A 8 ? B 5 ? 1 A DG 8 1_555 B DC 5 1_555 A DT 9 1_555 B DA 4 1_555 1.807 0.214 3.400 1.914 -2.580 37.084 0.695 -2.565 3.463 -4.047 -3.003 37.218 8 AA_DG8DT9:DA4DC5_BB A 8 ? B 5 ? A 9 ? B 4 ? 1 A DT 9 1_555 B DA 4 1_555 A DG 10 1_555 B DC 3 1_555 -1.517 1.010 3.232 -1.564 0.156 34.184 1.691 2.331 3.301 0.265 2.659 34.219 9 AA_DT9DG10:DC3DA4_BB A 9 ? B 4 ? A 10 ? B 3 ? 1 A DG 10 1_555 B DC 3 1_555 A DG 11 1_555 B DC 2 1_555 0.092 0.147 3.348 -1.363 3.811 35.015 -0.337 -0.359 3.339 6.307 2.257 35.241 10 AA_DG10DG11:DC2DC3_BB A 10 ? B 3 ? A 11 ? B 2 ? 1 A DG 11 1_555 B DC 2 1_555 A DC 12 1_555 B DG 1 1_555 0.863 -0.242 3.301 2.152 0.096 35.460 -0.411 -1.095 3.345 0.157 -3.529 35.523 11 AA_DG11DC12:DG1DC2_BB A 11 ? B 2 ? A 12 ? B 1 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'UNKNOWN ATOM OR ION' UNX 4 'ZINC ION' ZN 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 4HP3 _pdbx_initial_refinement_model.details 'PDB entry 4hp3' # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support homology _pdbx_struct_assembly_auth_evidence.details ? #