HEADER CHAPERONE/INHIBITOR 25-AUG-17 6ASP TITLE STRUCTURE OF GRP94 WITH METHYL 3-CHLORO-2-(2-(1-(2-ETHOXYBENZYL)-1 H- TITLE 2 IMIDAZOL-2-YL)ETHYL)-4,6-DIHYDROXYBENZOATE, A GRP94-SELECTIVE TITLE 3 INHIBITOR AND PROMISING THERAPEUTIC LEAD FOR TREATING MYOCILIN- TITLE 4 ASSOCIATED GLAUCOMA COMPND MOL_ID: 1; COMPND 2 MOLECULE: ENDOPLASMIN; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 69-286, GGGG LINKER, 328-337; COMPND 5 SYNONYM: 94 KDA GLUCOSE-REGULATED PROTEIN, GRP-94, HEAT SHOCK PROTEIN COMPND 6 90 KDA BETA MEMBER 1; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CANIS LUPUS FAMILIARIS; SOURCE 3 ORGANISM_COMMON: DOG; SOURCE 4 ORGANISM_TAXID: 9615; SOURCE 5 GENE: HSP90B1, GRP94, TRA1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS GRP94, HSP90, INHIBITOR, GLAUCOMA, CHAPERONE-INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR D.J.E.HUARD,R.L.LIEBERMAN REVDAT 4 04-OCT-23 6ASP 1 HETSYN REVDAT 3 17-APR-19 6ASP 1 REMARK REVDAT 2 02-MAY-18 6ASP 1 JRNL REVDAT 1 18-APR-18 6ASP 0 JRNL AUTH D.J.E.HUARD,V.M.CROWLEY,Y.DU,R.A.CORDOVA,Z.SUN,M.O.TOMLIN, JRNL AUTH 2 C.A.DICKEY,J.KOREN,L.BLAIR,H.FU,B.S.J.BLAGG,R.L.LIEBERMAN JRNL TITL TRIFUNCTIONAL HIGH-THROUGHPUT SCREEN IDENTIFIES PROMISING JRNL TITL 2 SCAFFOLD TO INHIBIT GRP94 AND TREAT MYOCILIN-ASSOCIATED JRNL TITL 3 GLAUCOMA. JRNL REF ACS CHEM. BIOL. V. 13 933 2018 JRNL REFN ESSN 1554-8937 JRNL PMID 29402077 JRNL DOI 10.1021/ACSCHEMBIO.7B01083 REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10.1_2155: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.78 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 15264 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.184 REMARK 3 R VALUE (WORKING SET) : 0.178 REMARK 3 FREE R VALUE : 0.238 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1527 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 38.7796 - 5.9881 0.99 1336 149 0.2082 0.2348 REMARK 3 2 5.9881 - 4.7556 1.00 1289 144 0.1911 0.2383 REMARK 3 3 4.7556 - 4.1553 1.00 1258 140 0.1409 0.2076 REMARK 3 4 4.1553 - 3.7757 1.00 1261 140 0.1550 0.2108 REMARK 3 5 3.7757 - 3.5053 1.00 1245 139 0.1602 0.2119 REMARK 3 6 3.5053 - 3.2987 1.00 1237 137 0.1685 0.2536 REMARK 3 7 3.2987 - 3.1336 1.00 1223 136 0.1794 0.2504 REMARK 3 8 3.1336 - 2.9972 1.00 1242 138 0.1844 0.2616 REMARK 3 9 2.9972 - 2.8819 1.00 1242 138 0.1971 0.2661 REMARK 3 10 2.8819 - 2.7825 1.00 1213 133 0.2171 0.3107 REMARK 3 11 2.7825 - 2.6955 0.96 1191 133 0.2144 0.2822 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.290 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.310 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 41.77 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 3576 REMARK 3 ANGLE : 1.244 4787 REMARK 3 CHIRALITY : 0.068 552 REMARK 3 PLANARITY : 0.007 587 REMARK 3 DIHEDRAL : 18.256 2102 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 74 THROUGH 96 ) REMARK 3 ORIGIN FOR THE GROUP (A): -60.1573 32.9049 -69.5076 REMARK 3 T TENSOR REMARK 3 T11: 0.3179 T22: 0.2571 REMARK 3 T33: 0.1801 T12: 0.1650 REMARK 3 T13: -0.0187 T23: 0.0287 REMARK 3 L TENSOR REMARK 3 L11: 0.5546 L22: 0.1044 REMARK 3 L33: 0.2766 L12: 0.2769 REMARK 3 L13: 0.0318 L23: -0.0317 REMARK 3 S TENSOR REMARK 3 S11: -0.5229 S12: 0.7792 S13: -0.4131 REMARK 3 S21: 0.2391 S22: 0.7923 S23: -0.3383 REMARK 3 S31: -0.0844 S32: 0.1904 S33: 0.0284 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 97 THROUGH 164 ) REMARK 3 ORIGIN FOR THE GROUP (A): -55.9468 37.3784 -49.9715 REMARK 3 T TENSOR REMARK 3 T11: 0.1838 T22: 0.1873 REMARK 3 T33: 0.2180 T12: -0.0024 REMARK 3 T13: 0.0258 T23: -0.0454 REMARK 3 L TENSOR REMARK 3 L11: 0.3992 L22: 0.3174 REMARK 3 L33: 0.7160 L12: 0.1761 REMARK 3 L13: 0.2333 L23: -0.2671 REMARK 3 S TENSOR REMARK 3 S11: 0.0331 S12: -0.0105 S13: 0.0474 REMARK 3 S21: 0.0398 S22: -0.0853 S23: 0.0866 REMARK 3 S31: 0.1189 S32: 0.0082 S33: -0.0001 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 165 THROUGH 195 ) REMARK 3 ORIGIN FOR THE GROUP (A): -48.6219 31.0111 -69.5510 REMARK 3 T TENSOR REMARK 3 T11: 0.4965 T22: 0.9209 REMARK 3 T33: 0.4585 T12: 0.2523 REMARK 3 T13: 0.1255 T23: -0.0545 REMARK 3 L TENSOR REMARK 3 L11: 0.2817 L22: 0.1645 REMARK 3 L33: 0.1159 L12: -0.0297 REMARK 3 L13: 0.0903 L23: 0.0396 REMARK 3 S TENSOR REMARK 3 S11: -0.2668 S12: 0.1539 S13: 0.0138 REMARK 3 S21: -0.4162 S22: -0.5505 S23: -0.3074 REMARK 3 S31: 0.1783 S32: 0.8112 S33: -0.0500 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 196 THROUGH 337 ) REMARK 3 ORIGIN FOR THE GROUP (A): -61.9095 31.9464 -50.3675 REMARK 3 T TENSOR REMARK 3 T11: 0.2179 T22: 0.1606 REMARK 3 T33: 0.2292 T12: -0.0249 REMARK 3 T13: -0.0596 T23: -0.0381 REMARK 3 L TENSOR REMARK 3 L11: 1.2786 L22: 0.7572 REMARK 3 L33: 1.1953 L12: 0.0364 REMARK 3 L13: -0.0819 L23: 0.4271 REMARK 3 S TENSOR REMARK 3 S11: 0.2165 S12: -0.0888 S13: -0.1792 REMARK 3 S21: -0.0007 S22: -0.1692 S23: -0.1050 REMARK 3 S31: 0.1542 S32: 0.0207 S33: 0.0004 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 74 THROUGH 96 ) REMARK 3 ORIGIN FOR THE GROUP (A): -59.9989 74.8129 -66.2663 REMARK 3 T TENSOR REMARK 3 T11: 0.3471 T22: 0.3291 REMARK 3 T33: 0.1147 T12: 0.0966 REMARK 3 T13: -0.0188 T23: -0.0225 REMARK 3 L TENSOR REMARK 3 L11: 0.1989 L22: 0.0920 REMARK 3 L33: 0.4892 L12: 0.1651 REMARK 3 L13: 0.0371 L23: -0.0830 REMARK 3 S TENSOR REMARK 3 S11: -0.3110 S12: 0.2209 S13: 0.5069 REMARK 3 S21: 0.2171 S22: 0.4074 S23: 0.0408 REMARK 3 S31: 0.1770 S32: 0.2955 S33: 0.0094 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 97 THROUGH 149 ) REMARK 3 ORIGIN FOR THE GROUP (A): -55.3981 77.1121 -44.5132 REMARK 3 T TENSOR REMARK 3 T11: 0.1686 T22: 0.2131 REMARK 3 T33: 0.1486 T12: -0.0058 REMARK 3 T13: 0.0127 T23: -0.0459 REMARK 3 L TENSOR REMARK 3 L11: 0.4308 L22: 0.3287 REMARK 3 L33: 0.3519 L12: -0.2018 REMARK 3 L13: 0.3014 L23: -0.2840 REMARK 3 S TENSOR REMARK 3 S11: 0.0985 S12: -0.1436 S13: 0.0121 REMARK 3 S21: 0.0609 S22: -0.0497 S23: -0.0530 REMARK 3 S31: -0.0295 S32: -0.1146 S33: 0.0001 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 150 THROUGH 337 ) REMARK 3 ORIGIN FOR THE GROUP (A): -59.3022 74.9700 -50.9923 REMARK 3 T TENSOR REMARK 3 T11: 0.1201 T22: 0.1380 REMARK 3 T33: 0.1428 T12: -0.0053 REMARK 3 T13: -0.0033 T23: -0.0499 REMARK 3 L TENSOR REMARK 3 L11: 2.1098 L22: 0.9244 REMARK 3 L33: 1.9537 L12: -0.3194 REMARK 3 L13: 0.4891 L23: 0.4635 REMARK 3 S TENSOR REMARK 3 S11: -0.0179 S12: -0.0024 S13: 0.0332 REMARK 3 S21: -0.0539 S22: 0.0454 S23: -0.0626 REMARK 3 S31: 0.0202 S32: 0.0957 S33: 0.0011 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6ASP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-AUG-17. REMARK 100 THE DEPOSITION ID IS D_1000229767. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-NOV-16 REMARK 200 TEMPERATURE (KELVIN) : 197.5 REMARK 200 PH : 7.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00000 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(220) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15293 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.696 REMARK 200 RESOLUTION RANGE LOW (A) : 38.780 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 13.80 REMARK 200 R MERGE (I) : 0.13010 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 22.4600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.79 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.67530 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2GFD REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.78 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.55 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1:1 30 MG/ML PROTEIN IN 100 MM BICINE, REMARK 280 PH 7.8 AGAINST MOTHER LIQUOR (37% PEG400, 5% GLYCEROL, 100 MM REMARK 280 BICINE, PH 7.8, 75 MM MAGNESIUM CHLORIDE). CRYSTALS WERE REMARK 280 HARVESTED, AND SOAKED FOR 48 HOURS IN MOTHER LIQUOR CONTAINING REMARK 280 3.69 MM INHIBITOR. AFTER SOAKING, GLYCEROL WAS ADDED TO ~25% REMARK 280 FINAL CONCENTRATION., VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 289.2K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 32.83050 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 48.00650 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 42.38600 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 48.00650 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 32.83050 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 42.38600 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 68 REMARK 465 LEU A 69 REMARK 465 ARG A 70 REMARK 465 GLU A 71 REMARK 465 LYS A 72 REMARK 465 SER A 73 REMARK 465 LYS A 168 REMARK 465 SER A 169 REMARK 465 ALA A 181 REMARK 465 GLN A 182 REMARK 465 GLU A 183 REMARK 465 ASP A 184 REMARK 465 GLY A 185 REMARK 465 GLN A 186 REMARK 465 GLY A 324 REMARK 465 GLY A 325 REMARK 465 GLY A 326 REMARK 465 GLY A 327 REMARK 465 SER B 68 REMARK 465 LEU B 69 REMARK 465 ARG B 70 REMARK 465 GLU B 71 REMARK 465 LYS B 72 REMARK 465 SER B 73 REMARK 465 ALA B 181 REMARK 465 GLN B 182 REMARK 465 GLU B 183 REMARK 465 ASP B 184 REMARK 465 GLY B 185 REMARK 465 GLN B 186 REMARK 465 GLY B 324 REMARK 465 GLY B 325 REMARK 465 GLY B 326 REMARK 465 GLY B 327 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 95 CG CD CE NZ REMARK 470 GLU A 123 CG CD OE1 OE2 REMARK 470 GLU A 130 CG CD OE1 OE2 REMARK 470 LYS A 140 CG CD CE NZ REMARK 470 GLU A 157 CG CD OE1 OE2 REMARK 470 GLU A 173 CG CD OE1 OE2 REMARK 470 LYS A 177 CG CD CE NZ REMARK 470 GLU A 180 CG CD OE1 OE2 REMARK 470 GLU A 253 CG CD OE1 OE2 REMARK 470 LYS A 328 CG CD CE NZ REMARK 470 LYS B 140 CG CD CE NZ REMARK 470 GLU B 157 CG CD OE1 OE2 REMARK 470 LYS B 168 CG CD CE NZ REMARK 470 SER B 169 OG REMARK 470 GLU B 180 CG CD OE1 OE2 REMARK 470 GLU B 190 CG CD OE1 OE2 REMARK 470 GLN B 194 CG CD OE1 NE2 REMARK 470 LYS B 328 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O LYS B 161 OG1 THR B 165 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 191 CA - CB - CG ANGL. DEV. = 17.2 DEGREES REMARK 500 LYS B 95 CA - CB - CG ANGL. DEV. = 14.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 129 129.09 -177.88 REMARK 500 THR A 165 -165.70 -128.35 REMARK 500 SER A 227 -8.53 83.37 REMARK 500 GLU A 229 172.29 174.21 REMARK 500 ASN A 276 39.04 -98.52 REMARK 500 ASN B 96 52.71 -114.09 REMARK 500 ASN B 129 129.96 179.72 REMARK 500 THR B 165 -165.59 -124.52 REMARK 500 ILE B 166 -81.68 -154.90 REMARK 500 ALA B 167 -109.61 37.02 REMARK 500 LYS B 168 -75.28 53.53 REMARK 500 SER B 169 -153.82 -119.37 REMARK 500 GLU B 173 -39.88 -38.70 REMARK 500 SER B 227 -9.46 82.44 REMARK 500 GLU B 229 173.87 173.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 P33 A 402 REMARK 610 P33 A 403 REMARK 610 P33 A 404 REMARK 610 P33 A 405 REMARK 610 P33 A 406 REMARK 610 P33 A 407 REMARK 610 P33 A 408 REMARK 610 P33 A 409 REMARK 610 P33 A 410 REMARK 610 P33 A 411 REMARK 610 P33 A 412 REMARK 610 P33 A 413 REMARK 610 V2C A 415 REMARK 610 P33 B 401 REMARK 610 P33 B 402 REMARK 610 P33 B 403 REMARK 610 P33 B 404 REMARK 610 V2C B 406 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue P33 A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue P33 A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue P33 A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue P33 A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue P33 A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue P33 A 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue P33 A 407 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue P33 A 408 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue P33 A 410 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue P33 A 412 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 414 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue V2C A 415 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue P33 B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue P33 B 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue P33 B 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue P33 B 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue V2C B 406 DBREF 6ASP A 69 286 UNP P41148 ENPL_CANLF 69 286 DBREF 6ASP A 328 337 UNP P41148 ENPL_CANLF 328 337 DBREF 6ASP B 69 286 UNP P41148 ENPL_CANLF 69 286 DBREF 6ASP B 328 337 UNP P41148 ENPL_CANLF 328 337 SEQADV 6ASP SER A 68 UNP P41148 EXPRESSION TAG SEQADV 6ASP GLY A 324 UNP P41148 LINKER SEQADV 6ASP GLY A 325 UNP P41148 LINKER SEQADV 6ASP GLY A 326 UNP P41148 LINKER SEQADV 6ASP GLY A 327 UNP P41148 LINKER SEQADV 6ASP SER B 68 UNP P41148 EXPRESSION TAG SEQADV 6ASP GLY B 324 UNP P41148 LINKER SEQADV 6ASP GLY B 325 UNP P41148 LINKER SEQADV 6ASP GLY B 326 UNP P41148 LINKER SEQADV 6ASP GLY B 327 UNP P41148 LINKER SEQRES 1 A 233 SER LEU ARG GLU LYS SER GLU LYS PHE ALA PHE GLN ALA SEQRES 2 A 233 GLU VAL ASN ARG MET MET LYS LEU ILE ILE ASN SER LEU SEQRES 3 A 233 TYR LYS ASN LYS GLU ILE PHE LEU ARG GLU LEU ILE SER SEQRES 4 A 233 ASN ALA SER ASP ALA LEU ASP LYS ILE ARG LEU ILE SER SEQRES 5 A 233 LEU THR ASP GLU ASN ALA LEU ALA GLY ASN GLU GLU LEU SEQRES 6 A 233 THR VAL LYS ILE LYS CYS ASP LYS GLU LYS ASN LEU LEU SEQRES 7 A 233 HIS VAL THR ASP THR GLY VAL GLY MET THR ARG GLU GLU SEQRES 8 A 233 LEU VAL LYS ASN LEU GLY THR ILE ALA LYS SER GLY THR SEQRES 9 A 233 SER GLU PHE LEU ASN LYS MET THR GLU ALA GLN GLU ASP SEQRES 10 A 233 GLY GLN SER THR SER GLU LEU ILE GLY GLN PHE GLY VAL SEQRES 11 A 233 GLY PHE TYR SER ALA PHE LEU VAL ALA ASP LYS VAL ILE SEQRES 12 A 233 VAL THR SER LYS HIS ASN ASN ASP THR GLN HIS ILE TRP SEQRES 13 A 233 GLU SER ASP SER ASN GLU PHE SER VAL ILE ALA ASP PRO SEQRES 14 A 233 ARG GLY ASN THR LEU GLY ARG GLY THR THR ILE THR LEU SEQRES 15 A 233 VAL LEU LYS GLU GLU ALA SER ASP TYR LEU GLU LEU ASP SEQRES 16 A 233 THR ILE LYS ASN LEU VAL LYS LYS TYR SER GLN PHE ILE SEQRES 17 A 233 ASN PHE PRO ILE TYR VAL TRP SER SER LYS THR GLY GLY SEQRES 18 A 233 GLY GLY LYS THR VAL TRP ASP TRP GLU LEU MET ASN SEQRES 1 B 233 SER LEU ARG GLU LYS SER GLU LYS PHE ALA PHE GLN ALA SEQRES 2 B 233 GLU VAL ASN ARG MET MET LYS LEU ILE ILE ASN SER LEU SEQRES 3 B 233 TYR LYS ASN LYS GLU ILE PHE LEU ARG GLU LEU ILE SER SEQRES 4 B 233 ASN ALA SER ASP ALA LEU ASP LYS ILE ARG LEU ILE SER SEQRES 5 B 233 LEU THR ASP GLU ASN ALA LEU ALA GLY ASN GLU GLU LEU SEQRES 6 B 233 THR VAL LYS ILE LYS CYS ASP LYS GLU LYS ASN LEU LEU SEQRES 7 B 233 HIS VAL THR ASP THR GLY VAL GLY MET THR ARG GLU GLU SEQRES 8 B 233 LEU VAL LYS ASN LEU GLY THR ILE ALA LYS SER GLY THR SEQRES 9 B 233 SER GLU PHE LEU ASN LYS MET THR GLU ALA GLN GLU ASP SEQRES 10 B 233 GLY GLN SER THR SER GLU LEU ILE GLY GLN PHE GLY VAL SEQRES 11 B 233 GLY PHE TYR SER ALA PHE LEU VAL ALA ASP LYS VAL ILE SEQRES 12 B 233 VAL THR SER LYS HIS ASN ASN ASP THR GLN HIS ILE TRP SEQRES 13 B 233 GLU SER ASP SER ASN GLU PHE SER VAL ILE ALA ASP PRO SEQRES 14 B 233 ARG GLY ASN THR LEU GLY ARG GLY THR THR ILE THR LEU SEQRES 15 B 233 VAL LEU LYS GLU GLU ALA SER ASP TYR LEU GLU LEU ASP SEQRES 16 B 233 THR ILE LYS ASN LEU VAL LYS LYS TYR SER GLN PHE ILE SEQRES 17 B 233 ASN PHE PRO ILE TYR VAL TRP SER SER LYS THR GLY GLY SEQRES 18 B 233 GLY GLY LYS THR VAL TRP ASP TRP GLU LEU MET ASN HET P33 A 401 22 HET P33 A 402 4 HET P33 A 403 10 HET P33 A 404 4 HET P33 A 405 4 HET P33 A 406 4 HET P33 A 407 4 HET P33 A 408 4 HET P33 A 409 4 HET P33 A 410 4 HET P33 A 411 4 HET P33 A 412 4 HET P33 A 413 4 HET GOL A 414 6 HET V2C A 415 27 HET P33 B 401 4 HET P33 B 402 10 HET P33 B 403 4 HET P33 B 404 4 HET GOL B 405 6 HET V2C B 406 27 HETNAM P33 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL HETNAM GOL GLYCEROL HETNAM V2C METHYL 3-CHLORO-2-(2-(1-(2-ETHOXYBENZYL)-1 H-IMIDAZOL- HETNAM 2 V2C 2-YL)ETHYL)-4,6-DIHYDROXYBENZOATE HETSYN P33 HEPTAETHYLENE GLYCOL; PEG330 HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 P33 17(C14 H30 O8) FORMUL 16 GOL 2(C3 H8 O3) FORMUL 17 V2C 2(C22 H23 CL N2 O5) FORMUL 24 HOH *37(H2 O) HELIX 1 AA1 GLN A 79 LEU A 93 1 15 HELIX 2 AA2 GLU A 98 ASP A 122 1 25 HELIX 3 AA3 THR A 155 THR A 165 1 11 HELIX 4 AA4 THR A 171 GLU A 180 1 10 HELIX 5 AA5 THR A 188 GLY A 196 1 9 HELIX 6 AA6 VAL A 197 TYR A 200 5 4 HELIX 7 AA7 SER A 201 VAL A 205 1 5 HELIX 8 AA8 GLU A 253 LEU A 259 5 7 HELIX 9 AA9 GLU A 260 GLN A 273 1 14 HELIX 10 AB1 GLN B 79 LEU B 93 1 15 HELIX 11 AB2 GLU B 98 ASP B 122 1 25 HELIX 12 AB3 THR B 155 THR B 165 1 11 HELIX 13 AB4 GLY B 170 GLU B 180 1 11 HELIX 14 AB5 THR B 188 GLY B 196 1 9 HELIX 15 AB6 VAL B 197 LEU B 204 5 8 HELIX 16 AB7 GLU B 253 LEU B 259 5 7 HELIX 17 AB8 GLU B 260 SER B 272 1 13 SHEET 1 AA1 9 LYS A 75 PHE A 76 0 SHEET 2 AA1 9 PHE A 230 ALA A 234 -1 O PHE A 230 N PHE A 76 SHEET 3 AA1 9 HIS A 221 SER A 225 -1 N ILE A 222 O ILE A 233 SHEET 4 AA1 9 ALA A 206 LYS A 214 -1 N VAL A 211 O TRP A 223 SHEET 5 AA1 9 GLY A 244 LEU A 251 -1 O THR A 248 N ILE A 210 SHEET 6 AA1 9 LEU A 144 ASP A 149 -1 N ASP A 149 O THR A 245 SHEET 7 AA1 9 VAL A 134 ASP A 139 -1 N ASP A 139 O LEU A 144 SHEET 8 AA1 9 ILE A 279 LYS A 285 1 O TYR A 280 N ILE A 136 SHEET 9 AA1 9 VAL A 330 LEU A 335 -1 O VAL A 330 N LYS A 285 SHEET 1 AA2 9 LYS B 75 PHE B 76 0 SHEET 2 AA2 9 PHE B 230 ALA B 234 -1 O PHE B 230 N PHE B 76 SHEET 3 AA2 9 HIS B 221 SER B 225 -1 N ILE B 222 O ILE B 233 SHEET 4 AA2 9 ALA B 206 LYS B 214 -1 N VAL B 211 O TRP B 223 SHEET 5 AA2 9 GLY B 244 LEU B 251 -1 O THR B 248 N ILE B 210 SHEET 6 AA2 9 LEU B 144 ASP B 149 -1 N ASP B 149 O THR B 245 SHEET 7 AA2 9 VAL B 134 ASP B 139 -1 N LYS B 137 O HIS B 146 SHEET 8 AA2 9 ILE B 279 LYS B 285 1 O TYR B 280 N VAL B 134 SHEET 9 AA2 9 VAL B 330 LEU B 335 -1 O VAL B 330 N LYS B 285 SITE 1 AC1 11 ASN A 83 LYS A 87 ILE A 90 ASP A 226 SITE 2 AC1 11 SER A 227 ASN A 228 ASN B 83 MET B 86 SITE 3 AC1 11 LYS B 87 ILE B 90 SER B 227 SITE 1 AC2 2 LYS A 214 THR B 263 SITE 1 AC3 4 THR A 212 ARG A 237 THR A 248 LEU B 117 SITE 1 AC4 5 GLU A 224 ASP A 226 GLU A 229 SER A 231 SITE 2 AC4 5 ARG B 84 SITE 1 AC5 6 ASP A 257 ASP A 262 THR A 263 HOH A 511 SITE 2 AC5 6 ARG B 156 ASP B 218 SITE 1 AC6 4 ASP A 113 LYS A 114 LEU A 117 PRO B 236 SITE 1 AC7 1 LYS A 137 SITE 1 AC8 3 GLU A 229 GLN B 79 ALA B 80 SITE 1 AC9 1 PRO A 236 SITE 1 AD1 1 ASN A 337 SITE 1 AD2 3 LYS A 135 TYR A 280 TRP A 333 SITE 1 AD3 15 ASN A 107 ALA A 111 LYS A 114 ASP A 149 SITE 2 AD3 15 MET A 154 ASN A 162 GLY A 196 VAL A 197 SITE 3 AD3 15 PHE A 199 TYR A 200 THR A 245 ILE A 247 SITE 4 AD3 15 HOH A 501 HOH A 504 HOH A 510 SITE 1 AD4 1 LYS B 135 SITE 1 AD5 4 THR B 212 ARG B 237 THR B 240 THR B 248 SITE 1 AD6 2 LYS B 137 THR B 148 SITE 1 AD7 1 LYS B 137 SITE 1 AD8 6 LYS B 75 GLU B 224 SER B 225 ASP B 226 SITE 2 AD8 6 GLU B 229 SER B 231 SITE 1 AD9 15 ASN B 107 ALA B 111 ASP B 149 MET B 154 SITE 2 AD9 15 ASN B 162 ILE B 166 GLY B 196 VAL B 197 SITE 3 AD9 15 PHE B 199 TYR B 200 THR B 245 ILE B 247 SITE 4 AD9 15 HOH B 501 HOH B 506 HOH B 509 CRYST1 65.661 84.772 96.013 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015230 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011796 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010415 0.00000